mRNA_S-dermatodea_contig10929.619.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig10929.619.1
Unique NamemRNA_S-dermatodea_contig10929.619.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig10929.619.1 vs. uniprot
Match: D7FPV3_ECTSI (Glutathione S-transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPV3_ECTSI)

HSP 1 Score: 345 bits (886), Expect = 3.250e-112
Identity = 170/214 (79.44%), Postives = 187/214 (87.38%), Query Frame = 3 
Query:   90 SSIVLSYFDIPGPAEAIRLAFYLADVPFEDRRVSREEFSKIKADLPFEQLPILTVDGEVFPQSQAILRYAGKIGGLYPDDPVRAAKCDAVTDCMFDIQAAIRPSIYETNSQRKLQMRKELSEVILPHSLGHLERWLERSGTKFFAGDEITICDLVIFTRMKWLRRGVLVGIPSDILRDVPGVRAHSEAVARHEKVLEYYQTGPGRVTGDGSPPL 731
            SSI L+YFDIPGPAEAIRLAFY+  +PF+DRRVSR+EF+KIK DLPF QLPILTVD EVFPQS AILRYAGKIGGLYP DP+ AAK DAV DCMFDIQAAIRPSIYETN+QRKL MRKELSEV LP  L +LERWLER+GT FF G+EITICDLVI+TRMKWLRRGVLVGIP  ILR+   VRAHSEAVA H KV +YY+ GPG+VTGDGSPP+
Sbjct:    2 SSITLTYFDIPGPAEAIRLAFYVGGIPFKDRRVSRQEFAKIKRDLPFAQLPILTVDDEVFPQSAAILRYAGKIGGLYPSDPIAAAKVDAVIDCMFDIQAAIRPSIYETNAQRKLSMRKELSEVTLPLWLQYLERWLERAGTTFFVGEEITICDLVIYTRMKWLRRGVLVGIPDTILRNFRRVRAHSEAVASHPKVDDYYKNGPGKVTGDGSPPI 215
[Close]
BLAST of mRNA_S-dermatodea_contig10929.619.1 vs. uniprot
Match: B1N8E6_9PHAE (Glutathione S-transferase 1 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E6_9PHAE)

HSP 1 Score: 188 bits (478), Expect = 2.540e-52
Identity = 90/201 (44.78%), Postives = 136/201 (67.66%), Query Frame = 3 
Query:   96 IVLSYFDIPGPAEAIRLAFYLADVPFEDRRVSREEFSKIKADLPFEQLPILTVDGEVFPQSQAILRYAGKIGGLYPDDPVRAAKCDAVTDCMFDIQAAIRPSIYETNSQRKLQMRKELSEVILPHSLGHLERWLERSGTKFFAGDEITICDLVIFTRMKWLRRGVLVGIPSDILRDVPGVRAHSEAVARHEKVLEYYQTGP 698
            ++LSYFDIP   E +RLA  ++   +ED+RVS+EEF  IK  LP+ QLP L V G + PQS A +RY GKIGGLY +DP+ AA  DA  + + D+   +RP+++E +  +KL+MRK +++  LP  LG+LER L+ +G  +FAG +++I D+ +  R+ WL+RG L GIP  I+ D P + A  ++V   EK+++Y ++GP
Sbjct:    5 LILSYFDIPALGEPLRLALAMSGQAWEDKRVSKEEFMAIKPSLPYNQLPTLEVGGTLIPQSLAQMRYIGKIGGLYSEDPIEAAFADAAMEAVIDMHFHLRPTVHEQDPAKKLEMRKAMTDNYLPTWLGNLERALKAAGGSYFAGGKLSIGDIYVVARLNWLKRGALDGIPDTIVDDFPLLSALVQSVMSEEKIVKYLESGP 205
[Close]
BLAST of mRNA_S-dermatodea_contig10929.619.1 vs. uniprot
Match: A0A7S2V6C7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6C7_9STRA)

HSP 1 Score: 175 bits (444), Expect = 2.430e-47
Identity = 89/204 (43.63%), Postives = 127/204 (62.25%), Query Frame = 3 
Query:   84 LPSSIVLSYFDIPGPAEAIRLAFYLADVPFEDRRVSREEFSKIKADLPFEQLPILTVDGEVFPQSQAILRYAGKIGGLYPDDPVRAAKCDAVTDCMFDIQAAIRPSIYETNSQRKLQMRKELSEVILPHSLGHLERWLERSGTKFFAGDEITICDLVIFTRMKWLRRGVLVGIPSDILRDVPGVRAHSEAVARHEKVLEYYQTG 695
            + ++I L+YF +PG A   RLAFY+  V FED  V  E+F  +K  LP +QLP+L V+G  + +S AILRYAGK+ GLYP DPV A KCD + D +      +  +I E ++++K++MR+EL+   LP   G+LE  L + G  F  GD++TI DL +  ++ WL +G+L GIP   +     V+A  EA   HEKV EYY +G
Sbjct:    8 MATTIKLTYFPLPGRAGYTRLAFYVGGVDFEDVIVKGEDFQAMKDSLPGKQLPVLEVNGVTYCESMAILRYAGKLSGLYPSDPVEALKCDMLIDMIQGAGNKVAATIREPDAEKKMKMREELASQTLPTLFGYLEEQLNKFGGNFCIGDQLTIADLELLIKVTWLTKGILDGIPPSWIDPFTKVKAIVEATKNHEKVAEYYASG 211
[Close]
BLAST of mRNA_S-dermatodea_contig10929.619.1 vs. uniprot
Match: D8LHF0_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHF0_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 7.160e-45
Identity = 82/199 (41.21%), Postives = 127/199 (63.82%), Query Frame = 3 
Query:  102 LSYFDIPGPAEAIRLAFYLADVPFEDRRVSREEFSKIKADLPFEQLPILTVDGEVFPQSQAILRYAGKIGGLYPDDPVRAAKCDAVTDCMFDIQAAIRPSIYETNSQRKLQMRKELSEVILPHSLGHLERWLERSGTKFFAGDEITICDLVIFTRMKWLRRGVLVGIPSDILRDVPGVRAHSEAVARHEKVLEYYQTGP 698
            L+YF+     E +RLA   + V + D RV  E++  +K  LP++Q+P+L VDG V PQS AILRY GKIG LYP DP++AA  D+ TD + DIQ  +R  I+E ++ +K Q+RK+L E +LP  L +LE+ L+ +G ++FAGD+++I D+ +  R+ WL  G   G+PS +L + P V +  + V    +++ Y +  P
Sbjct:    6 LTYFEFAALGEPLRLALAQSGVEWIDNRVPSEQWPTLKPTLPYQQMPVLEVDGAVIPQSLAILRYVGKIGNLYPTDPIQAAFADSATDAVSDIQGYMRGIIFEKDADKKAQLRKDLVETLLPTWLANLEKALKLAGGEYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLDESPLVSSLVQRVMAEPRIVAYMEERP 204
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BLAST of mRNA_S-dermatodea_contig10929.619.1 vs. uniprot
Match: A0A061SAH2_9CHLO (Prostaglandin-H2 D-isomerase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SAH2_9CHLO)

HSP 1 Score: 160 bits (406), Expect = 4.710e-42
Identity = 82/195 (42.05%), Postives = 118/195 (60.51%), Query Frame = 3 
Query:  102 LSYFDIPGPAEAIRLAFYLADVPFEDRRVSREEFSKIKADLPFEQLPILTVDGEVFPQSQAILRYAGKIGGLYPDDPVRAAKCDAVTDCMFDIQAAIRPSIYETNSQRKLQMRKELSEVILPHSLGHLERWLERSGTK-FFAGDEITICDLVIFTRMKWLRRGVLVGIPSDILRDVPGVRAHSEAVARHEKVLEY 683
            LSYFD  G AE IRLAF +  + FED R  RE++ ++K   P+  +P LT+   V+ QS AILRYAGK+ GLYP DPV A   D + D + D+   ++P++ E + ++K++MRK L+E  LP  LG+  + +E +G+  +  GD +TI DL ++T +  L  G+L GIP  I    P V A  E V   EKV  +
Sbjct:    5 LSYFDFKGVAEPIRLAFAVGGIDFEDHRFQREDWPQLKPKTPYGSVPTLTIGDRVYAQSNAILRYAGKLAGLYPTDPVEALAVDQIVDALEDMFLHVKPTVQEQDEKKKMEMRKVLAEETLPKWLGYFNKHIEENGSSGYIVGDSLTIADLKLYTLIGLLTSGMLDGIPKTIAEPFPKVTALLEKVGADEKVKAF 199
[Close]
BLAST of mRNA_S-dermatodea_contig10929.619.1 vs. uniprot
Match: A0A1V9YVK9_9STRA (Glutathione S-transferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YVK9_9STRA)

HSP 1 Score: 160 bits (404), Expect = 9.570e-42
Identity = 83/197 (42.13%), Postives = 121/197 (61.42%), Query Frame = 3 
Query:   93 SIVLSYFDIPGPAEAIRLAFYLADVPFEDRRVSREEFSKIKADLPFEQLPILTVDGEVFPQSQAILRYAGKIGGLYPDDPVRAAKCDAVTDCMFDIQAAIRPSIYETNSQRKLQMRKELSEVILPHSLGHLERWLERSGTKFFAGDEITICDLVIFTRMKWLRRGVLVGIPSDILRDVPGVRAHSEAVARHEKVLEY 683
            ++ ++YFD+ G AE  RLA ++ D+PFED R++RE F+ +K  LPF+Q+P+LTVDGEV  QS A+ RYAG++ GLYP D + A + D +     D  A + PS  E ++ ++L +R+ELS   LP     +E  L      +F GD +TI DL ++   + L  G L GIP+DIL   P   A ++AVA H KV  +
Sbjct:    5 TLKITYFDMTGRAELTRLALHIGDIPFEDDRLTREAFAALKPTLPFKQVPVLTVDGEVLAQSHAMARYAGRLAGLYPTDALEAFRVDEILAASDDTLAKLMPSFREQDAAKRLVLREELSAGPLPEHFACIEARLAAHKGPYFLGDALTIADLELYGSRQMLSSGWLDGIPTDILDAYPRWNAIADAVAAHPKVAAW 201
[Close]
BLAST of mRNA_S-dermatodea_contig10929.619.1 vs. uniprot
Match: A0A3C1L1F1_9DELT (Uncharacterized protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A3C1L1F1_9DELT)

HSP 1 Score: 158 bits (400), Expect = 4.060e-41
Identity = 90/205 (43.90%), Postives = 126/205 (61.46%), Query Frame = 3 
Query:   84 LPSSIVLSYFDIP-GPAEAIRLAFYLADVPFEDRRVSREEFSKIKAD--LPFEQLPILTVDGEVFPQSQAILRYAGKIGGLYP-DDPVRAAKCDAVTDCMFDIQAAIRPSIYETNSQRKLQMRKELSEVILPHSLGHLERWLERSGTK-FFAGDEITICDLVIFTRMKWLRRGVLVGIPSDILRDVPGVRAHSEAVARHEKVLEY 683
            + +++ L Y+D P   AE  RLA +L  + FED R +R++  ++K D  LPF QLP+L V  EV  Q+ AI RY G++ GLYP DDP++AA+ DAV D   DI   IRPSI E +  +KL MR ++ E  LP  LGHL+RWLE  G + F  G+ +TI DL ++  + WLR GVL GIP +I   +P + AH   +   E +  +
Sbjct:    1 MKTTLRLVYWDFPFWRAEVCRLALHLGGIEFEDVRPNRQQSQQMKRDHELPFGQLPVLYVGDEVIAQTGAIARYCGRLAGLYPHDDPLKAARVDAVIDAATDITWLIRPSIREPDPAKKLAMRAQIVETSLPTWLGHLQRWLECHGDQGFVVGESLTIGDLALWRLVGWLRSGVLDGIPENIGEHLPLLMAHQHKIGSIEPIAAW 205
[Close]
BLAST of mRNA_S-dermatodea_contig10929.619.1 vs. uniprot
Match: A0A0G4J4B5_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J4B5_PLABS)

HSP 1 Score: 157 bits (398), Expect = 7.320e-41
Identity = 80/209 (38.28%), Postives = 127/209 (60.77%), Query Frame = 3 
Query:   84 LPS-SIVLSYFDIPGPAEAIRLAFYLADVPFEDRRVSREEFSKIKADLPFEQLPILTVDGEVFPQSQAILRYAGKIGGLYPDDPVRAAKCDAVTDCMFDIQAAIRPSIYETNSQRKLQMRKELSEVILPHSLGHLERWLERSGTK-FFAGDEITICDLVIFTRMKWLRRGVLVGIPSDILRDVPGVRAHSEAVARHEKVLEYYQTGPGR 704
            +PS SI L+YFD+PG AE IRLA ++A VP+E  RV+R+++  +K   PF  LP++T+DG  + Q+ A+LRY   IG + P  P+   K D + +   DI  A+ PS+ E ++Q+K+ MRKEL++  LP  L  ++R L ++ T  +  G  ITI D+ ++   +W R G++ GIP D++   P +    + V  H KV E+ +  P +
Sbjct:    1 MPSPSIKLTYFDMPGRAETIRLALHVAGVPYEFERVARDQWPSLKPKTPFGGLPVMTIDGVQYAQTHALLRYVAAIGKMEPATPIDRLKVDQIIEANTDIVTALMPSLREPDAQKKMAMRKELADTTLPPLLKGIDRALGQNATPGYTCGSTITIADISLWGLTQWFRSGMIDGIPKDLIDGYPAIAKVVQTVGEHPKVAEWVKQNPAQ 209
[Close]
BLAST of mRNA_S-dermatodea_contig10929.619.1 vs. uniprot
Match: A0A7S2SNE8_9STRA (Hypothetical protein n=2 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SNE8_9STRA)

HSP 1 Score: 155 bits (393), Expect = 3.000e-40
Identity = 84/197 (42.64%), Postives = 119/197 (60.41%), Query Frame = 3 
Query:   93 SIVLSYFDIPGPAEAIRLAFYLADVPFEDRRVSREEFSKIKADLPFEQLPILTVDGEVFPQSQAILRYAGKIGGLYPDDPVRAAKCDAVTDCMFDIQAAIRPSIYETNSQRKLQMRKELSEVILPHSLGHLERWLERSGTKFFAGDEITICDLVIFTRMKWLRRGVLVGIPSDILRDVPGVRAHSEAVARHEKVLEY 683
            S+ LSYFD  G AEAIRLAF +  + FED R++RE F K K DLPF  LP L++  + F QS A+LRYAGK+ GLYP D + A K D + D + DIQ A+RPS +E + ++KL MRKE  E   P  +  +E  +E    K+  GD++TI DLV++        G L GIP +   +   + + ++AV  + +V  +
Sbjct:    6 SLKLSYFDGKGRAEAIRLAFAVGKIEFEDERLAREAFIKRKPDLPFGSLPTLSIGDKQFAQSNALLRYAGKLAGLYPADALEALKVDQILDAVEDIQGALRPSFFEQDKEKKLSMRKEFMENAFPRYVSGIESLVEG---KWAVGDKMTIADLVLYQLKDTFTSGFLDGIPKNAFDEYSKISSVADAVGLNAEVKAW 199
[Close]
BLAST of mRNA_S-dermatodea_contig10929.619.1 vs. uniprot
Match: D8LK37_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK37_ECTSI)

HSP 1 Score: 155 bits (392), Expect = 4.670e-40
Identity = 79/200 (39.50%), Postives = 124/200 (62.00%), Query Frame = 3 
Query:  102 LSYFDIPGPAEAIRLAFYLADVPFEDRRVSREEFSKIKADLPFEQLPILTVDGEVFPQSQAILRYAGKIGGLYPDDPVRAAKCDAVTDCMFDIQAAIRPSIYETNSQRKLQMRKELSEVILPHSLGHLERWLERSGTKFFAGDEITICDLVIFTRMKWLRRGVL-VGIPSDILRDVPGVRAHSEAVARHEKVLEYYQTGP 698
            L+YFDI    E +RLA   + V + D RV+ EE+  +K  LP++Q+P+L VDG V PQ+ AILRY GK+G LYP DP++AA  D+ TD + D+   +R   +E ++  K Q+ K+L E +LP  L +LE+ L+ +G K+FAGD+++I D+ +  R+ WL  G     +PS IL + P + +  + V    +++ Y +  P
Sbjct:    6 LTYFDIAALGEQLRLALAQSGVEWIDNRVTFEEWPTLKPTLPYQQMPVLEVDGAVIPQTFAILRYVGKMGDLYPTDPIQAAFADSATDAVNDMHGHMRAIFFEKDADAKTQLLKDLVEKLLPPWLANLEKALKLAGGKYFAGDKLSIGDIAVVARLNWLTDGTFDESVPSAILEEFPLLSSLVQRVMAEPRIVAYMEERP 205
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10929.619.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPV3_ECTSI3.250e-11279.44Glutathione S-transferase n=2 Tax=Ectocarpus TaxID... [more]
B1N8E6_9PHAE2.540e-5244.78Glutathione S-transferase 1 n=1 Tax=Laminaria digi... [more]
A0A7S2V6C7_9STRA2.430e-4743.63Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D8LHF0_ECTSI7.160e-4541.21Glutathione S-transferase n=1 Tax=Ectocarpus silic... [more]
A0A061SAH2_9CHLO4.710e-4242.05Prostaglandin-H2 D-isomerase n=1 Tax=Tetraselmis s... [more]
A0A1V9YVK9_9STRA9.570e-4242.13Glutathione S-transferase n=1 Tax=Achlya hypogyna ... [more]
A0A3C1L1F1_9DELT4.060e-4143.90Uncharacterized protein n=1 Tax=Myxococcales bacte... [more]
A0A0G4J4B5_PLABS7.320e-4138.28Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
A0A7S2SNE8_9STRA3.000e-4042.64Hypothetical protein n=2 Tax=labyrinthulid quahog ... [more]
D8LK37_ECTSI4.670e-4039.50Glutathione S-transferase n=1 Tax=Ectocarpus silic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10929contigS-dermatodea_contig10929:752..7133 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score159.5
Seed ortholog evalue2e-36
Seed eggNOG ortholog272952.HpaP800014
KEGG rclassRC00004,RC00069,RC00672,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944
KEGG koko:K00799,ko:K04097
KEGG TC1.A.12.2.2,1.A.12.3.2
KEGG ReactionR02266,R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905
KEGG Pathwayko00480,ko00590,ko00980,ko00982,ko00983,ko01100,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00590,map00980,map00982,map00983,map01100,map01524,map05200,map05204,map05225,map05418
GOsGO:0008150,GO:0010033,GO:0014070,GO:0042221,GO:0042493,GO:0045472,GO:0046677,GO:0050896,GO:0097327,GO:1901654,GO:1901700,GO:1904643
EggNOG free text desc.Glutathione S-transferase, C-terminal domain
EggNOG OGs3Q77R@4776,KOG1695@1,KOG1695@2759
EC2.5.1.18,5.3.99.2
COG Functional cat.O
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionGlutathione S-transferase
Ec32 orthologEc-18_001805.1
Exons6
Model size1959
Cds size717
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10929.619.1prot_S-dermatodea_contig10929.619.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig10929 826..5965 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924180.629173-UTR-S-dermatodea_contig10929:751..8251622924180.629173-UTR-S-dermatodea_contig10929:751..825Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10929 752..825 +
1694079073.4519594-UTR-S-dermatodea_contig10929:751..8251694079073.4519594-UTR-S-dermatodea_contig10929:751..825Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10929 752..825 +
1622924180.7046096-UTR-S-dermatodea_contig10929:5965..71331622924180.7046096-UTR-S-dermatodea_contig10929:5965..7133Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10929 5966..7133 +
1694079073.5446332-UTR-S-dermatodea_contig10929:5965..71331694079073.5446332-UTR-S-dermatodea_contig10929:5965..7133Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10929 5966..7133 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924180.6392605-CDS-S-dermatodea_contig10929:825..9701622924180.6392605-CDS-S-dermatodea_contig10929:825..970Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10929 826..970 +
1694079073.4702957-CDS-S-dermatodea_contig10929:825..9701694079073.4702957-CDS-S-dermatodea_contig10929:825..970Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10929 826..970 +
1622924180.6512156-CDS-S-dermatodea_contig10929:1566..16631622924180.6512156-CDS-S-dermatodea_contig10929:1566..1663Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10929 1567..1663 +
1694079073.4803917-CDS-S-dermatodea_contig10929:1566..16631694079073.4803917-CDS-S-dermatodea_contig10929:1566..1663Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10929 1567..1663 +
1622924180.6645937-CDS-S-dermatodea_contig10929:4356..44681622924180.6645937-CDS-S-dermatodea_contig10929:4356..4468Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10929 4357..4468 +
1694079073.4910324-CDS-S-dermatodea_contig10929:4356..44681694079073.4910324-CDS-S-dermatodea_contig10929:4356..4468Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10929 4357..4468 +
1622924180.6776905-CDS-S-dermatodea_contig10929:4762..49211622924180.6776905-CDS-S-dermatodea_contig10929:4762..4921Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10929 4763..4921 +
1694079073.5045543-CDS-S-dermatodea_contig10929:4762..49211694079073.5045543-CDS-S-dermatodea_contig10929:4762..4921Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10929 4763..4921 +
1622924180.6863298-CDS-S-dermatodea_contig10929:5266..53321622924180.6863298-CDS-S-dermatodea_contig10929:5266..5332Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10929 5267..5332 +
1694079073.520303-CDS-S-dermatodea_contig10929:5266..53321694079073.520303-CDS-S-dermatodea_contig10929:5266..5332Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10929 5267..5332 +
1622924180.6945214-CDS-S-dermatodea_contig10929:5827..59651622924180.6945214-CDS-S-dermatodea_contig10929:5827..5965Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10929 5828..5965 +
1694079073.5312622-CDS-S-dermatodea_contig10929:5827..59651694079073.5312622-CDS-S-dermatodea_contig10929:5827..5965Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10929 5828..5965 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig10929.619.1

>prot_S-dermatodea_contig10929.619.1 ID=prot_S-dermatodea_contig10929.619.1|Name=mRNA_S-dermatodea_contig10929.619.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=239bp
MHELPSSIVLSYFDIPGPAEAIRLAFYLADVPFEDRRVSREEFSKIKADL
PFEQLPILTVDGEVFPQSQAILRYAGKIGGLYPDDPVRAAKCDAVTDCMF
DIQAAIRPSIYETNSQRKLQMRKELSEVILPHSLGHLERWLERSGTKFFA
GDEITICDLVIFTRMKWLRRGVLVGIPSDILRDVPGVRAHSEAVARHEKV
LEYYQTGPGRVTGDGSPPLPPREVPPVSAPADRGDGVS*
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mRNA from alignment at S-dermatodea_contig10929:752..7133+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig10929.619.1 ID=mRNA_S-dermatodea_contig10929.619.1|Name=mRNA_S-dermatodea_contig10929.619.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6382bp|location=Sequence derived from alignment at S-dermatodea_contig10929:752..7133+ (Saccorhiza dermatodea SderLu1190fm monoicous)
TGTAAGGACGAGCGGAGCAGGGGAGGACAGCGCGTTGCGGTCGTAGCATC
AATAGTTGGAAGACCTTTTCGACCATGCACGAGCTACCTTCCTCCATCGT
GCTCAGCTACTTCGACATACCTGGCCCTGCTGAAGCGATCCGCCTTGCCT
TCTACCTCGCCGATGTCCCATTCGAGGATAGACGAGTCTCGCGCGAAGAG
TTCTCCAAGATCAAAGCAGGTATGATACTTGTATTCATGCGACTGCTGTA
GTACCGGGTGTACATAGTATATGCATTTTGGCATGTGCAGAGTATGCATT
TACACCTAAATAATGCTGCAGTATGCGCATCATTACGATACAGAATGCAT
ACAAACGAGGCTGCACGACTTCCGTGACTGGGAATCGAGAGCCCCTTGAT
AGAAAGCAGAGCTTTGTGCAGATTGTGTATCAGATGTATGGTGCGACAGA
TGTACCATGGGCATCTCGATCTTACGTGTACATACTTGTACGATTTCCGT
GACGGGGAGCTGGGAACTGAGAACCCCCTCATACATACGTTCGTCTTGTT
GCCAACGGCCCCACTATGATAATAAGCTGTTCTTTGCCGTTGGAATATCT
AAGGCCTGACAAGACGAGCGCCATCGGATGTAGTGACCTGCCGCCCGTGC
GTGTCGTCTCGTCCCACTTTCGCGAACGTTTGGCCGGCCGGTGCTGGTTC
TAAATTTCCCCGCATTTTTCTGCCCCGTTTCCTGTCTTTTTCCTGTCTAC
CGCTTGTGTATGTGCCTCCTGCCCTGCCGACGTGCTTCCTGGCGTGCTGG
CGTGCTTCGGGACAGACCTTCCGTTTGAGCAGCTTCCCATCCTCACCGTG
GATGGGGAGGTATTCCCGCAATCCCAGGCCATCCTGCGCTACGCTGGCAA
GATCGGCGGCCTGTGAGAGTCTCGGATAACAACGAGTCCGCTGTCATTTC
TCTTTTTTGTGTGCAGAGCGCTTGAACACCTGGTTTGTGGGATGGTGGAT
TCGACCCGGGGTCTGCCGGGGTGCGTAGTTTTTGCGTAGAACACGAAAAT
CATACATGCACGTGCGCAAGAAGAGCTGGTAGGACTCTACTAATACTATT
AATACTATCGTACGCTTAAAATGGGTGTAGAGGTTTTGGGGATGCAGGTA
CGTATCATACTGTACAAGTCTCACAAACGGAAGAGTGTGTAGCAACGTGC
TCGTTCTACGTTCTACACTATGCGCGGGGTTGGGTTGATTGCTTTTCATT
TTAGCGGAGCTGGATATTTTGTGTTCGCTTGGCGAGTATCATACGTTCTG
TTTGCCCAGGGGGTATCCACGTCGTGAGGGCAAAACCCCGCGGGGGCTAA
GCCTGCACACCTCAGCATACACATCAACTTCAATCTGCAGGGCGGCACCG
CCCCGAGCCGCACGAACACTGAACCACACAACAATGCGCCGTTCGTAACC
AAACAGTTATCCTGTGTAATGTATCATATAATATACAAGTACTACTGTAT
TGATTGTATTTATTGATTTCATTGATTATCGCATTTACAACCGACCGGCC
AGCCAATGGTTGCCGATCCCGCCATATGTACTGTACAGAGTATAAGAACG
GGTTGAAACGAAATATGACAATAGGATGGGTGCGCCCGAGTTGCTTGTTG
CCGGTCGGTCTATCAATCCCTCAGTCGGAGCAGGTGCAGGTACCCTCAGT
ACCGTCGTGGAGTCCAGGTCGTATTGGAAGCTGTGGATTGAGCTTATCGC
GCGAGGGATGGAGCAGGGCAATGAAACAACTTGTGGATTGTAGTAAAGTC
CCTCCGGGTCCGGGCGCACCTTGTTTGAAATCCGTTTTGGATGCCATACT
TGTACTTGTATTATTCTTAGATCCCTTGGTCCAAGATCACGTGACTTCTC
GAATAGATCCGAGCCCCAACGGATGATGGTTCTCCCGATGGCGCTCGTGC
TGTGTACCTGGTATGATACAAGTACAGTACCATATATTCCTGGAGTCTTG
GCCGAGGATCGTTCGTCGGATCCTCAATGGCAGGAAGGTGTTGGCTTTTG
CCCCCGCGCCCGAGGAATATCTCCTCCAACGTCCGGCTAGGCCGCGCCCC
ACCACAAATCACACAAAAACCGTTTCCGGTTTTCGCTCGAGCCTGCCCGT
GTCTTAATGTCTTAATCCAACCTGTGTCCACCACAACACAAAGCCTGAAG
ATGTTTTTCGGGGCCTGTATCATAGAGGAGCTAGCCCGAGCCTGAGGGTT
CATATTCTCAGGCCAAATGTTTTGTGACAAAAAAAAAAAAAAACACACAC
ACACACACACACACAATTTTTTGTCTGTGCTCCGCTATGGGCTTTGCGCA
AAAACATAAATAAAAAACACGAGGATGGGACGGAGACCCGGCCTTCTACA
TCTTTAACGACACGATTGTTGAACTTGAGGTGAGACTGCAAGGTGTAATT
ACTATATATTTGCGTACACGTGCATACATACAGACAGACACAGCGTAGTA
CATACATATGTACAACAGCAGTATCAAACAAACAAAACATACAGACTGCT
GTAGGATATCATGCATACACAGCCGAACGACGGCGATGCAGGACAAAACA
ACAGCAAGGCGCCCGCCATTGAGTTCAACTCGTTCCACCAGCGTGCCCTC
GAAAGCGTCTCTTTGCCCCTATGGGTGCATCGCGCAGAACAACAGAGTGT
TGCGCTACCAACGGCTGTTTGGTGTTTTGTTCTTTGTATCATTCTCTCTT
TCTGCTTGCCCATCAACTAAACTATTTTTTTCAGCTGTCGCCACAACAAC
CCACGGCAGTAGTGCTGATCCACGGACACTCCGGCGGCCATCGCAGGTGC
TGTCTCTCACCCCCCCTTGCATACATCCCGTCCTCGCGTTCTCACAGGCA
GCTTTGTTCTGTGCCGAGGGAGGCGTTAACAGTTCTGTATGTCTTGTGTT
TGTTTTCGCCACGCAAATTGACCATCCCTTCCGTAGGTCCAGCAAAACTT
TTCGCCACCTACAAAAATATTCTGGACCATTTCCGCTTTTGTTATTCCCG
AAGCGCGCCTCCCACAAAATGAACACAAAAAAAACATACGGAACTGGTTT
CATTTTGTTTTTTTGTTCCCATTACGTTTGGCCTCACTGTCCGATACTGC
TTTGTGGTAGGCGCACGACTTCCTGCCCAACGGCATGTTTAGCCCGGCTT
CAGAGATATTTGTGCAAAAATAAAGTTGTACTCAGGCGAGTAAACCTGAC
AGGTGTGCATGTACCTTGGAGTATGATGCGAGATACGCAGCTTGCCGCTT
TGGACTGTTTAACGACGGGAAAATTTCGACTGCTGAAGAGCGACGACCGT
GGCAACCCCGTTTCAGACACCATTTTCGATCAATGATTCTTGATCGCGTG
GCCCGGCACGTGTGTTAGCTATTTGTTCCGTGACACCGCTCTGCTCATCG
TCGGCGTGGCGCTGAGGCTGCCTTCCTATTGGCGTAAAGCCGTGGTGGTC
CAGTACAGCACCAGCCTTTCGTTCAAGGGCAGCAAATATCAGGACATACC
ACCAACCGAAGCTAACCCATATGATGCCCCCCCCCCCCGCCCACCACCAC
GGTAGGTACCCGGATGACCCGGTGAGAGCGGCGAAATGCGACGCGGTAAC
CGATTGCATGTTCGACATCCAGGCTGCTATCAGGCCGTCCATCTACGAGA
CCAACTCTCAGCGCAAGGTGTGAATAATTGCAATCGTCGGGGGGGGCTGG
CGTATGGTCGCATGATTTGCTCCCATCGATCTGTTTTTTTGCATCGATCC
GTTTCAATACATGGGATGCATGCGCTGCCGGACACACCTTGTGTCTGAAT
TTGCTAAATATTACAGAAGGGCTTTGAATGTGGCCGACCAATTTTTAAAT
AGAAACAATAACTGTGAAAAAACATGCAAATCAATAACGTTGAGCTTACC
GGCGCAACACGTCCCCAGCACTTCCTTCTCCTGTTTCGTGCCATGATGCC
CCGGCAAACAGCTCCAGATGCGCAAGGAACTGTCGGAGGTGATCCTGCCG
CATTCGCTGGGCCATCTGGAGCGATGGCTGGAACGGTCCGGGACTAAGTT
TTTCGCCGGAGACGAGATCACAATCTGCGATCTCGTCATTTTCACGCGAA
TGAAGTGGCTCAGACGAGGGGTGAGGGCCTTCTTTTTTCTCCGTGGGTCG
TGTATACTCGTGTTTAGCACCCGGTCTGTATTCTTCGCGCTCGTCTCTCT
CCACTGCCGGGGTAAACGCAACGCGGCACGGTCAAACGTGGTCCATCCCT
TCGTACAGTAGTAGCCCGTTCTGCAAAAATGCTGTAGCTCCGGGCACGGC
AATGTCGCCTTGGTACTGTACACACGACGAAAGGCGCCACGATTGCATCT
CGTTGGACCAGGGTATGACGCCTAGCGCGAGTCACATGCGTCCAACTTTG
CCTTTGAAAGGGAACCTTTGTTTCACCTGCCACCCCTCTATATTATCATA
CTGCCCGTTGGAAAGGTGCTTGTGGGAATTCCTAGCGACATTCTGCGGGA
CGTCCCGGGGGTCCGCGCGCACAGCGAAGCTGTGAGTCACCTGTGTTCCA
CGAGTTACCACCTCGTGCTGGGTATATTTTTTGCATACAAGGCTTCTGAA
ACTTCCATTTCCTTGTACTTGCAGCTGTCCAAAGTACACGCTAGCGCGGT
GGGTCAACCTTGAGAGATTTGTTTTGTGTGTCAATTCTTGGTCAACACAA
TGCATGCACCTGGGTAGAAAAACTCACGTGAAGAGGAATTCCCATCTCTC
ACCTGTCCTTCCAGAAATAAGTTCTTCTGTCTATCTTCCAAACGGGCAAA
AAACCGAAGCCATTCAAAAACGCTTGGTGATCCCTTGGCTCGGCGTGTGT
ATGGCCAGCCTCTTGAGGTCCGGCAAAGACTGCGCTGGGCGACATATTTT
CCCCAGGAGCTCCGCCAAACACAGAAAGTAGGTATTGGTTGTATGCAAAA
AACACGCCCCCGCAGGTCAGGTCTGGTCGCCGTAACGACTACTGTTGCCT
CCTTTGGCGCACCTCTCTCGCCGCAGGTCGCTCGCCACGAGAAAGTCCTC
GAGTACTACCAAACCGGGCCGGGTAGGGTGACGGGGGACGGCAGCCCTCC
TCTACCCCCTCGGGAAGTCCCGCCGGTATCAGCACCCGCCGACCGGGGGG
ATGGTGTCTCGTGATCGTTTGAAAGAGTTGTTGGGCTCTCTTACGGTGAT
GGCGATGATGCAGGGGGTGGAGCTCGAGGCGGGTGGTGTACAAGGCACTC
CGTGCCGCGGTAGCGATCGATGCTCGTAGCCGTATGTAATTTTTTAATAC
GGGTTTGGGCAAACGGAATAACATATTGTCACTGCGCTTGAGAGTTTGCG
TGGGCGAGGGGCTACTACTACAGCTGTAGCATCATACGTAACGTTAACCT
CCACAATGGGTGTATTATTAATAGTAGCTTGGGCGATCTTTCCTCCCGTG
CTTTAAAAAATATTGGACCCCACGGCTCGCTCTCTGTCTTTTAATCCTTA
TATTGTTTTAGGGGCTGGTCTACTTGTTTCGAATTGCCTGGCCGAATGTG
TATTGGCCTGCTTGGCGGTCTCTGTGGTACTGCTTTTGTTTCCGATGGTT
GCATTTTCTCTTTGCTTTTTTGTTCCAGTGAACTTCTCGTCACGTGCGGA
AGGCGCCCTATGGGTGCGCACCGTTTCACGACTCCTGTGCGTTTTGAAAG
CGTATTTTTGCTAAATCATGCATGTTCAAGATCAAGTTGAAGTTGCACAA
CTGGTTTAAGTGATTATGAAGAACTAAAACGTTTATGTTTACAAATAAAA
CGGGAGGTGTTGAAAGAGTTTGCGTTTCATCACTAAAGTAATTCCGCAAA
ACATTCACAAGGATCTGTTCAGTAGTATCATACCAAGGATGGAGCAGCAG
CAAACGGGAGTCGTACAAGCAGTTGCCGCAGCAGTATGGTAGGAGTAGCA
TAACAAGACAGCCGACTGAAGGCCGGGTACCGAAAAATGTCTGGACGAAT
CTCGCAATGACCTGTACACAACACTAACACTATTAAAGCGGTGCTGCCAC
TGCCATAACGGATGGACTTGTTGTTGCCAAGTTGTATGGTTCGCGTCGCG
CCGTGCGGTTGGAGCTGCTGGCACCTTCACGACGACGACTGCTCGTGGTG
GGGGACGGCGCTCAGTCCATCTTTCACGTGTTTCAGCGCGTGGAACTATA
CTATCCAAGCCCGCGGCGGGAAAATGAATACCACATATATTGCGAAAGCG
AGGGTCTGGGACCAAAATCTTAGTATTAATATTAATATTACCAAAGGTGC
ATTGGGCCCGAGGCTTTCCAAAAGGTAGCGCG
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Coding sequence (CDS) from alignment at S-dermatodea_contig10929:752..7133+

>mRNA_S-dermatodea_contig10929.619.1 ID=mRNA_S-dermatodea_contig10929.619.1|Name=mRNA_S-dermatodea_contig10929.619.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1434bp|location=Sequence derived from alignment at S-dermatodea_contig10929:752..7133+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCACGAGCTACCTTCCTCCATCGTGCTCAGCTACTTCGACATACCTGG
CCCTGCTGAAGCGATCCGCCTTGCCTTCTACCTCGCCGATGTCCCATTCG
AGGATAGACGAGTCTCGCGCGAAGAGTTCTCCAAGATCAAAGCAGATGCA
CGAGCTACCTTCCTCCATCGTGCTCAGCTACTTCGACATACCTGGCCCTG
CTGAAGCGATCCGCCTTGCCTTCTACCTCGCCGATGTCCCATTCGAGGAT
AGACGAGTCTCGCGCGAAGAGTTCTCCAAGATCAAAGCAGACCTTCCGTT
TGAGCAGCTTCCCATCCTCACCGTGGATGGGGAGGTATTCCCGCAATCCC
AGGCCATCCTGCGCTACGCTGGCAAGATCGGCGGCCTACCTTCCGTTTGA
GCAGCTTCCCATCCTCACCGTGGATGGGGAGGTATTCCCGCAATCCCAGG
CCATCCTGCGCTACGCTGGCAAGATCGGCGGCCTGTACCCGGATGACCCG
GTGAGAGCGGCGAAATGCGACGCGGTAACCGATTGCATGTTCGACATCCA
GGCTGCTATCAGGCCGTCCATCTACGAGACCAACTCTCAGCGCAAGGTAC
CCGGATGACCCGGTGAGAGCGGCGAAATGCGACGCGGTAACCGATTGCAT
GTTCGACATCCAGGCTGCTATCAGGCCGTCCATCTACGAGACCAACTCTC
AGCGCAAGCTCCAGATGCGCAAGGAACTGTCGGAGGTGATCCTGCCGCAT
TCGCTGGGCCATCTGGAGCGATGGCTGGAACGGTCCGGGACTAAGTTTTT
CGCCGGAGACGAGATCACAATCTGCGATCTCGTCATTTTCACGCGAATGA
AGTGGCTCAGACGAGGGCTCCAGATGCGCAAGGAACTGTCGGAGGTGATC
CTGCCGCATTCGCTGGGCCATCTGGAGCGATGGCTGGAACGGTCCGGGAC
TAAGTTTTTCGCCGGAGACGAGATCACAATCTGCGATCTCGTCATTTTCA
CGCGAATGAAGTGGCTCAGACGAGGGGTGCTTGTGGGAATTCCTAGCGAC
ATTCTGCGGGACGTCCCGGGGGTCCGCGCGCACAGCGAAGCTGTGCTTGT
GGGAATTCCTAGCGACATTCTGCGGGACGTCCCGGGGGTCCGCGCGCACA
GCGAAGCTGTCGCTCGCCACGAGAAAGTCCTCGAGTACTACCAAACCGGG
CCGGGTAGGGTGACGGGGGACGGCAGCCCTCCTCTACCCCCTCGGGAAGT
CCCGCCGGTATCAGCACCCGCCGACCGGGGGGATGGTGTCTCGTGAGTCG
CTCGCCACGAGAAAGTCCTCGAGTACTACCAAACCGGGCCGGGTAGGGTG
ACGGGGGACGGCAGCCCTCCTCTACCCCCTCGGGAAGTCCCGCCGGTATC
AGCACCCGCCGACCGGGGGGATGGTGTCTCGTGA
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