mRNA_S-dermatodea_contig10927.618.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig10927.618.1
Unique NamemRNA_S-dermatodea_contig10927.618.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig10927.618.1 vs. uniprot
Match: D7FS84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS84_ECTSI)

HSP 1 Score: 208 bits (530), Expect = 1.100e-57
Identity = 126/311 (40.51%), Postives = 170/311 (54.66%), Query Frame = 3
Query:  222 MNKSGGSTIKSMLSQWKGIRSRSRLLVDGGTFL---DFARTGRLKRFGHSSILTFGGYVESLRASGLVG-DNCKWFTVFRHPVSRLVSAYFYCKYLERAPLCAPKEIDM--DTVDLVTFAEHWGNFGLRQFALALVPARDIISSP----------PAKSCKKCPGWYKAKLHFDS-LGQQSYNSTEAGLSRTRKVDSA---LEQYLLPAFDILDANYAAVGLLEDVPATLSLFNEALGMPGLDWKAQFATKGSQNVNPLSADAQYERDEA--LRNAWVDPDIQRILWLDLALYEHATMVNAKQLAHYDLKE 1088
            MNK+GGST+K ML+ W   ++ +  L D   +L   DFA+       G  + L +G Y E LR  G +G   CKWFT+FRHP+ RLVSAYFYCK   +  LCA   +D   D  DL  FAEHWG+FGLRQFALA V   +++++           P    + CPGWY+ KL+    L +Q       G   +    S    +   L P  ++L   YAAVG+LE    +L LFNEALGMPG DW   F + G +N     +D  +  +EA  L  +W DP ++R L LDL LY++A  V+ +Q+  Y L E
Sbjct:    1 MNKAGGSTVKYMLAPWTKAQNVTVGLYDSPQWLEGKDFAQDF----LGDENSLMWGAYTEGLRPFGGLGLRECKWFTIFRHPIPRLVSAYFYCKKKPQDGLCATVALDANADDTDLYAFAEHWGDFGLRQFALAFVLPEELLANKVKYDATGICTPYHGKRSCPGWYELKLYLQQQLDEQEQGEGSRGWDGSGAAASGAATISHLLQPVQELLTNEYAAVGVLEQWETSLLLFNEALGMPGFDWPETFGSIGKKN-----SDGTFHNEEAEMLLRSWTDPRLRRYLSLDLLLYDYAVSVHNQQVDKYGLGE 302          
BLAST of mRNA_S-dermatodea_contig10927.618.1 vs. uniprot
Match: A0A6H5JY77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY77_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 1.710e-57
Identity = 123/339 (36.28%), Postives = 184/339 (54.28%), Query Frame = 3
Query:   99 VAIIMALTTSGAKDKRNPDLNAKGGRSYPAEASDNCWVYLHMNKSGGSTIKSMLSQW---KGIRSRSRLLVDGGTFLDFARTGRLKRFGHSSILTFGGYVESLRASGLVGD-NCKWFTVFRHPVSRLVSAYFYCKYLERAPLCAPKEIDMDTVDLVTFAEHWGNFGLRQFALALVPARDIISSPPAKS-CKKC--------PGWYKAKLHFDSLGQQSYNSTEAGLSRTRKVDSALEQYLLPAFDILDANYAAVGLLEDVPATLSLFNEALGMPGLDWKAQFATKGSQNVNPLSADAQYER--DEALRNAWVDPDIQRILWLDLALYEHATMVNAKQLA 1070
            V I +  ++S A +  NP    +G +     +  +CWV+ HMNKSGG T++ M+  +   KG+ +     ++  +   +A T        +++ T+GGY E LR   +  D +CKWFTVFRHPVSR+VSAYFYC+      LCA   +D   VDL+TFAEHWGN+GLRQFALA + A D+  +      C++         P WY+ K H+  L  Q             + +S L Q+L  A + L   YAAVG++E+   ++ LFN  L +   DW  +F   G +N    S  +Q+E     AL+ AW  P++++ +WLD+ LY+HA  V+  Q+A
Sbjct:   20 VVISLGASSSIAMNSTNP---VQGAQELKPTSKCDCWVFSHMNKSGGMTVRKMIMPFLTEKGVSTALFDDIEWSSGRSYAETF----VKENAVFTYGGYTEGLR---MYDDRDCKWFTVFRHPVSRVVSAYFYCQRAHHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHNEVVSEFCQQARGHGDVCIPAWYRQK-HYLHLPHQD------DFCGPTQPESGLAQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLRRFDWVKEFQKSGKKN----SGGSQFETASKSALKAAWHSPELKKFIWLDILLYDHALSVHRSQVA 337          
BLAST of mRNA_S-dermatodea_contig10927.618.1 vs. uniprot
Match: D7FWQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ3_ECTSI)

HSP 1 Score: 204 bits (519), Expect = 2.460e-54
Identity = 122/316 (38.61%), Postives = 175/316 (55.38%), Query Frame = 3
Query:  198 DNCWVYLHMNKSGGSTIKSMLSQWKGIR-----SRSRLLVDGGTFLDFARTGRLKRFGHSSILTFGGYVESLRASGLVGDNCKWFTVFRHPVSRLVSAYFYCKYLERAPLCAPKEIDMDTVDLVTFAEHWGNFGLRQFALALVPA---RDIISSPPAKSC-----KKCPGWYKAKLHFDSL--------GQQSYNSTEAGLSRTRKVDSALEQYLLPAFDILDANYAAVGLLEDVPATLSLFNEALGMPGLDWKAQFATKGSQNVNPLSADAQYERDEALRNAWVDPDIQRILWLDLALYEHATMVNAKQLAHYDL 1082
            D CWV++H+ K GGST+K ML +  G R     S    L D  +    A  G     G +  +  GGY E+LR S  V   C++FT+FRHP++R+VSAYFYC+       CA + +D   VDL+TFA+HWGNF +RQFAL  VP+   ++ I +P A++      KK  GWY+ K++ +          GQ    + E   + T  +++ L   L PA D++ + Y AVG+LE    TL LF+ AL +PG+ W AQFA  G Q V+  +   +    E L+ AW D ++++ + LDL LYEHA  V  +Q   Y L
Sbjct:  154 DQCWVFMHLQKCGGSTVKYMLRRSYGSRYSIYDSNQWKLGDDIS----ANFGVKLARGETWNVMAGGYTEALRRSEPVDAGCRFFTLFRHPIARMVSAYFYCRSTLGDAACASEVVDAKDVDLLTFAKHWGNFAVRQFALGFVPSDGVQEYIRTPEAQALHDFDLKKIAGWYQLKMYLERPEKGDWGVPGQSEAMTVEHDAAAT--LEAPLYDLLQPAMDLIRSGYVAVGILEQWNTTLHLFDHALEIPGMYWGAQFAEGGKQRVDYKNKRLE---SETLKQAWTDSELKKYMRLDLLLYEHAVDVFHEQARGYGL 460          
BLAST of mRNA_S-dermatodea_contig10927.618.1 vs. uniprot
Match: D7G715_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G715_ECTSI)

HSP 1 Score: 192 bits (487), Expect = 1.560e-50
Identity = 122/339 (35.99%), Postives = 171/339 (50.44%), Query Frame = 3
Query:  150 PDLNAKGGRSYPA-------EASDNCWVYLHMNKSGGSTIKSMLSQWKGIRSR---SRLLVDGGTFLDFARTGRLKRFGHSSILTFGGYVESLRASGLVGDN-----CKWFTVFRHPVSRLVSAYFYCKYLERAPLCAPKEIDMDTVDLVTFAEHWGNFGLRQFALALVP---ARDIISSP--------PAKSCKKCPGWYKAKLHFDSLGQQSYNSTEAGLSRTRKVDSALEQYLLPAFDILDANYAAVGLLEDVPATLSLFNEALGMPGLDWKAQFATKGSQNVNPLSADAQYERDEALRNAWVDPDIQRILWLDLALYEHATMVNAKQLAHYDLKE 1088
            PD   K  +  PA        + + CW++ H+ K+GG+T+K +L    G  S    S     G  + +          G S+    GGY+E+LR +     +     C+WFTVFRHPVSRLVSAY+YC+      LCA + +    VDLVTFA HWGNF LRQFAL  V     +D + SP         A+  +  PGWY  KL  +     + +++  G        + LE    P  D+L  NYA VG+LED  ATLSLF+ AL MPG+ W+ +F   G  NV+      + E+ + L+ A  DP+I + L LDL LY  A  +  +Q   Y + +
Sbjct:   63 PDAAEKSPQDAPALNIEDSPRSENRCWIFNHLQKAGGTTVKRLLFDSWGSESTTYDSYQWKKGQGYAESVAASLASPAGWSAAA--GGYLEALRRTPAFQPDDERTPCRWFTVFRHPVSRLVSAYYYCREDPSDQLCASEFVSSRNVDLVTFARHWGNFALRQFALGFVSHDKVKDFLVSPNGGGAMGLTAEQVELMPGWYMLKLFLNDRSGVADDTSPEG--------TRLEYMFRPVVDLLRDNYAVVGILEDWNATLSLFDSALDMPGMTWREEFERSGKLNVDTRF---KGEKQDVLQQALSDPEIVKHLSLDLRLYGQAVDIFNQQRHSYGIAQ 388          
BLAST of mRNA_S-dermatodea_contig10927.618.1 vs. uniprot
Match: D7G716_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G716_ECTSI)

HSP 1 Score: 192 bits (487), Expect = 6.810e-50
Identity = 111/306 (36.27%), Postives = 163/306 (53.27%), Query Frame = 3
Query:  204 CWVYLHMNKSGGSTIKSMLSQWKGIRSRSRLLVDGGTFLDF-----ARTGRLKRFGHSSILTFGGYVESLRASGLVGDNCKWFTVFRHPVSRLVSAYFYCKYLERAPLCAPKEIDMDTVDLVTFAEHWGNFGLRQFALALVPARDIISSPPAKSCKKCPGWYKAKLHFDS--------LGQQSYNSTEAGLSRTRKVDSALEQYLLPAFDILDANYAAVGLLEDVPATLSLFNEALGMPGLDWKAQFATKGSQNVNPLSADAQYERDEALRNAWVDPDIQRILWLDLALYEHATMVNAKQLAHYDL 1082
            CWV++H+ K GGST+K +L    G    SR  +       F     A+ G     G    +  GGY E+LR S  VG  C++FT+FRHP++R+VSAYFYC+ +     CA + +    VDL+TFA+HWGNF LRQFAL  VP+ D+               Y+ K++ +         LGQ+   +     + T   D+ L + L PA D++   Y AVG+LE    TL LF+  L MP ++W+ QFA  G  +V+ ++   + E    L+ AW D ++++ + LDL LYEHA  V  +Q   + L
Sbjct:  177 CWVFMHLQKCGGSTVKDLLEDRWG----SRFFIYDSMRWKFGDEFSAKFGAKLALGDKWNVMTGGYTEALRLSEPVGAGCRFFTLFRHPIARMVSAYFYCRSVSGDVACASEVMQAKDVDLLTFAKHWGNFALRQFALGFVPSDDVQE-------------YQLKMYLERPQKEDGGVLGQREAMTAHQDAAATP--DAPLYELLQPAMDLVRDGYVAVGILEQWNTTLRLFDHTLDMPVMNWEEQFAESGKHHVDIVNKQLEIE---TLQQAWTDSELKKYMRLDLLLYEHAVDVFHQQARSHGL 460          
BLAST of mRNA_S-dermatodea_contig10927.618.1 vs. uniprot
Match: A0A6H5JQY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQY7_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 9.080e-49
Identity = 110/297 (37.04%), Postives = 160/297 (53.87%), Query Frame = 3
Query:  204 CWVYLHMNKSGGSTIKSMLSQWKGIRSRSRLLVDGGTFLDF--ARTGRLKRFGHSSILTFGGYVESLRASGLVGDNCKWFTVFRHPVSRLVSAYFYCKYLERAPLCAPKEIDMDTVDLVTFAEHWGNFGLRQFALALVPARDIISSPPAKSCKKCPGWYKAKLHFDS-LGQQSYNSTEAGLSRTRKVDSA-LEQYLLPAFDILDANYAAVGLLEDVPATLSLFNEALGMPGLDWKAQFATKGSQNVNPLSADAQYERDEALRNAWVDPDIQRILWLDLALYEHATMVNAKQLAHYDL 1082
            CWVY  MNK+GG++I+ M+   K   + +   V   T   +     G  +       L +G Y E LR    V   CKWFT+ RHP++RLVSA+ YC  +    LCA +    +  D+  FAEHWGN G+ QFALA     DI+ +       K P WYKAKL+F+  LG     ST A +S      +  + + L P  ++L + YAAVG+LE    ++ LF+ AL +PG +W +  A+   +NV+   A     +++ L  +  DP +++ILWLD+ LYEHA  V+  QL+ Y L
Sbjct:   37 CWVYTDMNKAGGTSIRRMI---KDYAAATNTTVGEFTHTQYNAGDRGVQQILDRRPSLIWGAYTEGLRPYATV-LGCKWFTMVRHPIARLVSAFNYCGIVPSDQLCATRIHKPEDGDIYDFAEHWGNHGVVQFALAFEDLNDILVTEV-----KSPPWYKAKLYFEGRLGPSGKTSTSANISTKDVCQNVWMPEILQPVEELLRSKYAAVGILEQWETSMMLFDHALQLPGFNWTSTSASSTPRNVHDSKA-----KNDLLVASMTDPVLKQILWLDILLYEHACSVHKAQLSRYGL 319          
BLAST of mRNA_S-dermatodea_contig10927.618.1 vs. uniprot
Match: A0A6H5JNJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ0_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 2.510e-48
Identity = 106/296 (35.81%), Postives = 159/296 (53.72%), Query Frame = 3
Query:  204 CWVYLHMNKSGGSTIKSMLSQWKGIRSRSRLLVDGGTFLDFARTGRLKRFGHSSILTFGGYVESLRASGLVGDNCKWFTVFRHPVSRLVSAYFYCKYLERAPLCAPKEIDMDTVDLVTFAEHWGNFGLRQFALALVPARDIISSPPAKSCKKCPGWYKAKLHFDS-LGQQSYNSTEAGLSRTRKVDSA-LEQYLLPAFDILDANYAAVGLLEDVPATLSLFNEALGMPGLDWKAQFATKGSQNVNPLSADAQY-ERDEALRNAWVDPDIQRILWLDLALYEHATMVNAKQLAHYDL 1082
            CWV+ H NK+GG+T+K+ L  +   R+ +  L     +    + G         +L  GGY E LR S   G  CKWFT+ RHP++RL+SA++YC    R  LCA      +  D+  FA+HWGN+ L QFAL +V   +I +          P W+KAKL+F+  LG     ST    +   +  S  +   L P  ++L +NYAAVG+LE    ++ LF+ AL +PG +W     T  S +++P  +  +  E+   L  A  DP +++ +WLDL LYE+A  ++ +QL  YDL
Sbjct:   37 CWVFTHNNKAGGTTVKTHLRNYAESRNETVALCHSDWYARGDK-GIQDLLNDKPVLIAGGYAEGLRTSAFQG--CKWFTMMRHPIARLISAFYYCSGGNRDQLCAANIHKPEDGDIYDFAKHWGNYALLQFALGVVDQHEIFAEEV-----DAPAWFKAKLYFEGRLGYPGNMSTATNRTTHDEWQSVWIPDILQPVEELLRSNYAAVGILEHWQRSMMLFDHALEIPGFNW-----TVASASLSPRKSQNKIVEKKAMLAAAMTDPVLRQYVWLDLLLYEYACSLHEEQLRRYDL 319          
BLAST of mRNA_S-dermatodea_contig10927.618.1 vs. uniprot
Match: A0A6H5JQM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM0_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 3.260e-36
Identity = 100/304 (32.89%), Postives = 147/304 (48.36%), Query Frame = 3
Query:  198 DNCWVYLHMNKSGGSTIKSMLSQ-WKGIRSRSRLLVD------GGTFLDFARTGRLKRFGHSSILTFGGYVESLRASGLVGDNCKWFTVFRHPVSRLVSAYFYCKYLERAPLCAPKEIDMDTVDLVTFAEHWGNFGLRQFALALVPARDIISSPPAKSCKKCPG-WYKAKLHFDSLGQQSYNSTEAGLSRTRKVDSALEQYLLPAFDILDANYAAVGLLEDVPATLSLFNEALGMPGLDWKAQFATKGSQNVNPLSADAQYERDEALRNAWVDPDIQRILWLDLALYEHATMVNAKQLAHYDLK 1085
            D+CW+++HM+KSG S  + + ++ W+    +  L+ D      G  F         K       L  GG VESLR       +CKW T+FRHP++RL+SAY +C    + P+C P E    +  LV FAE WGNF +RQFAL  V    +      +  +     WY  K +              G++     D  LE  L P   +L   YAAVG+ +++  T+ LF++AL M GLDW + +AT G        ++      E  R A  +P I   L LD++LYEHA  V   Q+A + ++
Sbjct:  271 DSCWIFMHMDKSGASGARRVATERWR----KDELVFDTVQWRRGDGFAADVMASHWK-------LLHGGCVESLRNHK--ERSCKWLTIFRHPIARLLSAYHHCLEAPKDPVCPPTE----STGLVVFAELWGNFAMRQFALESVSPSAVKEWAAQRQARTGTSMWYLVKEYL----------ARGGIAE----DEVLESMLEPVKGLLSTQYAAVGIAQELETTMVLFSKALSMEGLDWSSSWATLGINEEVKQDSEYDIAESEPFRQALENPRIVSALRLDMSLYEHAMHVFKDQVAQFGIE 543          
BLAST of mRNA_S-dermatodea_contig10927.618.1 vs. uniprot
Match: D8LU75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU75_ECTSI)

HSP 1 Score: 143 bits (360), Expect = 1.300e-34
Identity = 98/296 (33.11%), Postives = 142/296 (47.97%), Query Frame = 3
Query:  222 MNKSGGSTIKSMLS-QWKGIRSRSRLLVD------GGTFLDFARTGRLKRFGHSSILTFGGYVESLRASGLVGDNCKWFTVFRHPVSRLVSAYFYCKYLERAPLCAPKEIDMDTVDLVTFAEHWGNFGLRQFALALVPARDIISSPPAKSCKKCPG-WYKAKLHFDSLGQQSYNSTEAGLSRTRKVDSALEQYLLPAFDILDANYAAVGLLEDVPATLSLFNEALGMPGLDWKAQFATKGSQNVNPLSADAQYERDEALRNAWVDPDIQRILWLDLALYEHATMVNAKQLAHYDLK 1085
            M+KSG S  + + + QW+    +  L+ D      G  F       R K       L  GG VESLR     G +CKW T+FRHP++RL+SAY +C    + P+C P E    +  L  FAE WGNF +RQFALA V    +      +  +     WY  K +              G++    + S LE    P   +L   YAAVG+ +++  T+ LF++AL M GLDW + +AT G    +   ++      E  R A  +P I   L LD++LYEHA  V   Q+A + ++
Sbjct:    1 MDKSGASGARRVATEQWR----KDELVFDTVQWRRGDGFAADVMASRWK-------LLHGGCVESLRNHK--GRSCKWITIFRHPIARLLSAYDHCLGAPKDPVCPPTE----STGLAAFAELWGNFAMRQFALAAVSPSAVKEWAAQRQARTGTSMWYLVKEYL----------ARGGIAEDEVLGSKLE----PVKGLLSTQYAAVGIAQELKTTMVLFSKALSMEGLDWSSSWATLGINEEDKQDSEYDITESEPFRQALENPRIVSALRLDMSLYEHAVHVFKDQVAQFGIE 265          
BLAST of mRNA_S-dermatodea_contig10927.618.1 vs. uniprot
Match: A0A6H5JT23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT23_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 5.290e-18
Identity = 91/310 (29.35%), Postives = 133/310 (42.90%), Query Frame = 3
Query:  174 RSYPAEASDNCWVYLHMNKSGGSTIKSML---SQWKGIRSRSRLLVDGGTFLDFARTGRLKRFGHSSILTFGGYVESLRASG---LVGDNCKWFTVFRHPVSRLVSAYFYCKYLERAPLCAPK-----EIDMDTVD-LVTFAE-HWGNFGLRQFALALVPARDIISSPPAKSCKKCPGWYKAKLHFDSLGQQSYNSTEAGLSRTRKVDSALEQYLLPAFDILDANYAAVGLLEDVPATLSLFNEALGMPGLDWKAQFATKGSQNVNPLSADAQYERDEALRNAWVDPDIQRILWLDLALYEHATMVNAKQ 1064
            RS P +  + C V+ HM KSGGSTIK  L   S+  G       +  GG  ++  +    + F  S+++   GY E +R  G    V  +C++FT+ RHPV RLVSA+FYC       L  PK     +  +   D L+ FA+ HW N   +Q    +     +I    A   +  PG  +                  GL   +KV+           DIL + Y AVG++E    ++ LFN  +  P  DW        +  V   +      RDE L+ A   P I R++  DL LY  A  +  +Q
Sbjct:   31 RSEPGQPPEYCTVFHHMVKSGGSTIKHNLHISSRAAGGPRPGSCVAGGGKRINSCK----EAFNSSAVIM--GYAELMRQDGPLEAVRRDCEYFTLLRHPVDRLVSAFFYCPTDHDLQLRPPKWCGYADDPLPATDRLLEFAQQHWKNMAYKQMTFGMYCPHGLICE--ATEVETAPGLDEPH----------------GLDVLQKVE-----------DIL-SGYTAVGIMEHWDLSMQLFNARVRSPVRDW--------NMTVRSNAGLPSELRDEVLQWAHDSPVIHRLMATDLLLYSFALSIFKRQ 296          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10927.618.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D7FS84_ECTSI1.100e-5740.51Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JY77_9PHAE1.710e-5736.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWQ3_ECTSI2.460e-5438.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G715_ECTSI1.560e-5035.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G716_ECTSI6.810e-5036.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JQY7_9PHAE9.080e-4937.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNJ0_9PHAE2.510e-4835.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQM0_9PHAE3.260e-3632.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LU75_ECTSI1.300e-3433.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JT23_9PHAE5.290e-1829.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10927contigS-dermatodea_contig10927:4373..7837 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score205.3
Seed ortholog evalue4.8e-50
Seed eggNOG ortholog2880.D7FWQ3
EggNOG free text desc.Sulfotransferase family
EggNOG OGs2CYGC@1,2S47N@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Exons4
Model size2342
Cds size1086
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10927.618.1prot_S-dermatodea_contig10927.618.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig10927 4399..6607 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924180.5412014-UTR-S-dermatodea_contig10927:4372..43981622924180.5412014-UTR-S-dermatodea_contig10927:4372..4398Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10927 4373..4398 +
1694079073.3944418-UTR-S-dermatodea_contig10927:4372..43981694079073.3944418-UTR-S-dermatodea_contig10927:4372..4398Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10927 4373..4398 +
1622924180.5921712-UTR-S-dermatodea_contig10927:6607..78371622924180.5921712-UTR-S-dermatodea_contig10927:6607..7837Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10927 6608..7837 +
1694079073.4377933-UTR-S-dermatodea_contig10927:6607..78371694079073.4377933-UTR-S-dermatodea_contig10927:6607..7837Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10927 6608..7837 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924180.5512538-CDS-S-dermatodea_contig10927:4398..45751622924180.5512538-CDS-S-dermatodea_contig10927:4398..4575Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10927 4399..4575 +
1694079073.4050243-CDS-S-dermatodea_contig10927:4398..45751694079073.4050243-CDS-S-dermatodea_contig10927:4398..4575Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10927 4399..4575 +
1622924180.5659428-CDS-S-dermatodea_contig10927:4800..50991622924180.5659428-CDS-S-dermatodea_contig10927:4800..5099Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10927 4801..5099 +
1694079073.4129212-CDS-S-dermatodea_contig10927:4800..50991694079073.4129212-CDS-S-dermatodea_contig10927:4800..5099Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10927 4801..5099 +
1622924180.5741563-CDS-S-dermatodea_contig10927:5319..54841622924180.5741563-CDS-S-dermatodea_contig10927:5319..5484Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10927 5320..5484 +
1694079073.4210873-CDS-S-dermatodea_contig10927:5319..54841694079073.4210873-CDS-S-dermatodea_contig10927:5319..5484Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10927 5320..5484 +
1622924180.58205-CDS-S-dermatodea_contig10927:6162..66071622924180.58205-CDS-S-dermatodea_contig10927:6162..6607Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10927 6163..6607 +
1694079073.4293816-CDS-S-dermatodea_contig10927:6162..66071694079073.4293816-CDS-S-dermatodea_contig10927:6162..6607Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10927 6163..6607 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig10927.618.1

>prot_S-dermatodea_contig10927.618.1 ID=prot_S-dermatodea_contig10927.618.1|Name=mRNA_S-dermatodea_contig10927.618.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=362bp
MALTKGVRLLSRRVGIVMALILIVVAIIMALTTSGAKDKRNPDLNAKGGR
SYPAEASDNCWVYLHMNKSGGSTIKSMLSQWKGIRSRSRLLVDGGTFLDF
ARTGRLKRFGHSSILTFGGYVESLRASGLVGDNCKWFTVFRHPVSRLVSA
YFYCKYLERAPLCAPKEIDMDTVDLVTFAEHWGNFGLRQFALALVPARDI
ISSPPAKSCKKCPGWYKAKLHFDSLGQQSYNSTEAGLSRTRKVDSALEQY
LLPAFDILDANYAAVGLLEDVPATLSLFNEALGMPGLDWKAQFATKGSQN
VNPLSADAQYERDEALRNAWVDPDIQRILWLDLALYEHATMVNAKQLAHY
DLKEVASVGPP*
back to top

mRNA from alignment at S-dermatodea_contig10927:4373..7837+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig10927.618.1 ID=mRNA_S-dermatodea_contig10927.618.1|Name=mRNA_S-dermatodea_contig10927.618.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3465bp|location=Sequence derived from alignment at S-dermatodea_contig10927:4373..7837+ (Saccorhiza dermatodea SderLu1190fm monoicous)
AGGCGTCGTTTTCGCTGTAAGAAAATATGGCACTAACGAAGGGCGTGCGC TTGTTGTCCCGCCGGGTCGGAATCGTCATGGCGCTTATACTAATAGTGGT GGCCATCATTATGGCTCTGACGACAAGTGGTGCAAAAGACAAACGTAATC CCGACCTGAACGCCAAGGGGGGGCGAAGCTACCCCGCTGAGGCCTCTGAT AACGTGAGCGATCCGCAGTGCTGCTTCCTGTTTCATCCCGAGTTGGCGGC ATGCTAGCCTATACTTTCCTTCTTCGCAAACCTCTTGAAGGTGTGATGTG AGGCAGCTGCTACTTAGAGAAACGGAATAATCTATCCTATCATAGCGCAT ATTAGCGTTTCTTCGGACGCGCCGGCGATGCTCTAATGTAGGCTCCGTTT TGTTTGCCTTGCACGTCGGCACACGCAGTGCTGGGTTTACCTCCACATGA ACAAGTCCGGGGGGAGCACCATCAAGTCCATGCTTTCTCAATGGAAAGGC ATCAGGTCAAGATCACGCCTGCTAGTGGACGGTGGAACGTTCCTAGATTT TGCTCGAACCGGGAGGCTGAAACGATTCGGGCATTCGTCAATTCTGACCT TCGGCGGGTACGTGGAGAGTCTGCGAGCATCCGGATTGGTGGGCGACAAC TGTAAATGGTTTACCGTCTTCAGGCATCCTGTCTCCAGGCTCGTTTCAGC GTACTTCTACTGCAAGTACTTGGAAAGGTAGGAACAACTTGTGCTTGCTG GAAGCACTCCATTTGGAATGCCAACAGCGTCCTGACAGTGGTCGAGGCGC TAGGCTTATTTTATCCCCGGAAATTGACACAAACAAGGTTGATAACTTCA GCACCATATTGAAAATCAGCAAATATGTCGCCCGTCGGTTGAAAGGAAAT TCAACACGTTAATTTTCGTTGTTGCTTGTTGTGATATCTCCTACAAGGGC TCCTCTCTGTGCACCAAAGGAGATCGACATGGACACCGTGGATCTTGTGA CGTTTGCTGAGCACTGGGGCAACTTCGGCTTGCGGCAGTTCGCTCTTGCG CTCGTGCCAGCTCGAGACATAATCTCGTCTCCTCCTGCGAAATCCTGCAA AAAGTGCCCCGGGTAAGTCGAACGTCGTCGATTGAGGTTGCCACCAATGT GTGAGCAGCAAGCCTAACATCTGTCGATCAATGTTAGGGTTTATTGGATC GCATAAGCTGGCTTCCAATCGGTGCAGCAAAGGGGACTTACGAATTGATG CTGACTTGGCCGGGGGTGGCAGGGTACCGATTGACCGTCCGAAGTTCGTG GTTGGATGGCCGGGAAATCAGCGACGGTTGTACCCTGTTTGCGCCATGAC CTTAGGCCCAGCGATCATTTCCTAGGACTATTTCGCTTGCGTTTTCCGTG ACTGTCGGAACCAAATGCATTGACGCGCCGGCCAGGAGACCGCGATACAG AAAATACGACGTCGCACATTATCGCATGGCCACCGGGCTTTCTGTAGCCA ATTTACTGCCTACTAGCGAGCTGTCGGAAGCTCAAAGGATCATTCGCCCC GTCCCCTTCGGAAAAGCACGGGACGGTGACGATGTCGCGGATGTCTTGGA GTAGCCAAAATTAAACGTGTACATGGAGCAGCTGGCTGGTCTTGACGACT AGGTGTGATGACCACACGTAAGCCATTTGCGGTGATATGCGGACACCAAT ACCGTCTGCCGCTGCCAAACTCTGTAGCCGCGAAGTGGCTTCTCTCCCCC TAGTTTACATTTGAGTCGGCTGCTTTGCTCCTTTGTACAGGTGGTACAAG GCGAAGCTACATTTCGACAGCTTAGGACAGCAATCATATAACAGCACCGA AGCTGGTTTGTCAAGAACACGCAAGGTGGACAGCGCCTTGGAGCAGTACT TGTTGCCCGCGTTCGACATCCTGGACGCCAACTATGCAGCTGTTGGCCTA CTGGAGGACGTACCTGCAACGTTGAGTTTGTTCAACGAAGCCTTGGGAAT GCCGGGTTTAGACTGGAAGGCCCAGTTCGCTACAAAAGGCTCACAGAACG TCAACCCTTTGAGCGCGGACGCACAATATGAGCGTGATGAGGCGCTACGG AACGCGTGGGTGGACCCCGACATCCAGAGAATACTGTGGCTCGACTTAGC CTTGTACGAGCACGCAACCATGGTAAACGCGAAGCAGCTGGCGCACTACG ATCTAAAGGAGGTGGCATCAGTTGGGCCACCATAGGTTGTTCTCCGGCCA AGAGCGAATACCGTGTCGACCCGATCGCCAAAACAAATGACGCGGTTACA CGAAGAACCTTGGAATTCTCTTAGCCGCGATCAAAGGAAACATCCCCGCA AAATTCACGGGTGGCATAAAATGCCCGGTAGGTGTATTCGTCTGACAAGT ACTTGTTGGATCGACTTGTTTTGAGCGACATCGAACCAGTTCATTGACGG AAACATATATGTACACGTTTCATATCGTGCTCAGGTCGTTTAGGTACGTC TGTCCGGCAATTGGACGTGCTCAGTGTTAAGGCCTTCCGTCGGGGCTGCC GAACGCGAAATTGCAAGCCAGGTCGCTGGATGTCAATCTCTTACAAGTGT TTGAGCCGGCACGGGCTGCAGTGCGAGGCAAGCGTTCCCGATAGGCACAT ATCGACATGAGCAAGCGCCAGATTCGACGAGACGGAGGGCGGATCGATCG TCGCCGAGAGAAAGGACGACTAAGCCATACTCACGGAAATCGTAGTAAGG CGGGAACCTTCGAGATTATTTGTTGAGGAATACATTTGTGCGAGGGAACG AACTCAAGAGAGAGCAGACAAAGGCGAGTACGAGTGCGTGCAGAGAGTGG GGGTACGTGGCGAGGGGGCGGCTGCTGAACAACAATAATATTCAGCGTAA GCCGAAGGCCATGACTTCGCAGCTGATGTACGATCATTCGCGTATCAGCT CGAGCTCAAGACCGTCGCCGCTCCGCAGCAGCGCAGCTATAAGTTTTTCT TTTCGGCACGCTTTATATCCCTACGGGTTTTGTTACGAGCGATAAGTTTT CTTGCTATGGTCCGGTTCGCCTTTGACTGCTGAGAGCATAGTACGTGGTG GGTAGGTCCAGTTCCCGAGATGAAATATATACATGAGTTGTTGGTTTTGG TCTCAAGTGTTTTGTTCAGTGATTGGTGTTTCCTGTGTCCTTTGACTTGC TTTTGACTGGTTCTAGCTTGGGACTTGACAGCACGTCATACGGTGTTTTT GTGACGACTATTTTCCCGGAGCGCTGCAATTTGACCCAAGCTGTAGCACT GCTGTTTTGTTGTGTGGATTTAATCAGCACTCTATACAGCACACGCTGTA ATCGATCCAGACATAATACCTTGTCAGCTGTATGACAACAAACACAGTTT TCGTGAGATTCAGAGTGAAGTATTCGATTCAGAGTGAGGAGCCCAAACAA TTGATATTTCCCACC
back to top

Coding sequence (CDS) from alignment at S-dermatodea_contig10927:4373..7837+

>mRNA_S-dermatodea_contig10927.618.1 ID=mRNA_S-dermatodea_contig10927.618.1|Name=mRNA_S-dermatodea_contig10927.618.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2172bp|location=Sequence derived from alignment at S-dermatodea_contig10927:4373..7837+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGCACTAACGAAGGGCGTGCGCTTGTTGTCCCGCCGGGTCGGAATCGT
CATGGCGCTTATACTAATAGTGGTGGCCATCATTATGGCTCTGACGACAA
GTGGTGCAAAAGACAAACGTAATCCCGACCTGAACGCCAAGGGGGGGCGA
AGCTACCCCGCTGAGGCCTCTGATAACATGGCACTAACGAAGGGCGTGCG
CTTGTTGTCCCGCCGGGTCGGAATCGTCATGGCGCTTATACTAATAGTGG
TGGCCATCATTATGGCTCTGACGACAAGTGGTGCAAAAGACAAACGTAAT
CCCGACCTGAACGCCAAGGGGGGGCGAAGCTACCCCGCTGAGGCCTCTGA
TAACTGCTGGGTTTACCTCCACATGAACAAGTCCGGGGGGAGCACCATCA
AGTCCATGCTTTCTCAATGGAAAGGCATCAGGTCAAGATCACGCCTGCTA
GTGGACGGTGGAACGTTCCTAGATTTTGCTCGAACCGGGAGGCTGAAACG
ATTCGGGCATTCGTCAATTCTGACCTTCGGCGGGTACGTGGAGAGTCTGC
GAGCATCCGGATTGGTGGGCGACAACTGTAAATGGTTTACCGTCTTCAGG
CATCCTGTCTCCAGGCTCGTTTCAGCGTACTTCTACTGCAAGTACTTGGA
AAGTGCTGGGTTTACCTCCACATGAACAAGTCCGGGGGGAGCACCATCAA
GTCCATGCTTTCTCAATGGAAAGGCATCAGGTCAAGATCACGCCTGCTAG
TGGACGGTGGAACGTTCCTAGATTTTGCTCGAACCGGGAGGCTGAAACGA
TTCGGGCATTCGTCAATTCTGACCTTCGGCGGGTACGTGGAGAGTCTGCG
AGCATCCGGATTGGTGGGCGACAACTGTAAATGGTTTACCGTCTTCAGGC
ATCCTGTCTCCAGGCTCGTTTCAGCGTACTTCTACTGCAAGTACTTGGAA
AGGGCTCCTCTCTGTGCACCAAAGGAGATCGACATGGACACCGTGGATCT
TGTGACGTTTGCTGAGCACTGGGGCAACTTCGGCTTGCGGCAGTTCGCTC
TTGCGCTCGTGCCAGCTCGAGACATAATCTCGTCTCCTCCTGCGAAATCC
TGCAAAAAGTGCCCCGGGGCTCCTCTCTGTGCACCAAAGGAGATCGACAT
GGACACCGTGGATCTTGTGACGTTTGCTGAGCACTGGGGCAACTTCGGCT
TGCGGCAGTTCGCTCTTGCGCTCGTGCCAGCTCGAGACATAATCTCGTCT
CCTCCTGCGAAATCCTGCAAAAAGTGCCCCGGGTGGTACAAGGCGAAGCT
ACATTTCGACAGCTTAGGACAGCAATCATATAACAGCACCGAAGCTGGTT
TGTCAAGAACACGCAAGGTGGACAGCGCCTTGGAGCAGTACTTGTTGCCC
GCGTTCGACATCCTGGACGCCAACTATGCAGCTGTTGGCCTACTGGAGGA
CGTACCTGCAACGTTGAGTTTGTTCAACGAAGCCTTGGGAATGCCGGGTT
TAGACTGGAAGGCCCAGTTCGCTACAAAAGGCTCACAGAACGTCAACCCT
TTGAGCGCGGACGCACAATATGAGCGTGATGAGGCGCTACGGAACGCGTG
GGTGGACCCCGACATCCAGAGAATACTGTGGCTCGACTTAGCCTTGTACG
AGCACGCAACCATGGTAAACGCGAAGCAGCTGGCGCACTACGATCTAAAG
GAGGTGGCATCAGTTGGGCCACCATAGGTGGTACAAGGCGAAGCTACATT
TCGACAGCTTAGGACAGCAATCATATAACAGCACCGAAGCTGGTTTGTCA
AGAACACGCAAGGTGGACAGCGCCTTGGAGCAGTACTTGTTGCCCGCGTT
CGACATCCTGGACGCCAACTATGCAGCTGTTGGCCTACTGGAGGACGTAC
CTGCAACGTTGAGTTTGTTCAACGAAGCCTTGGGAATGCCGGGTTTAGAC
TGGAAGGCCCAGTTCGCTACAAAAGGCTCACAGAACGTCAACCCTTTGAG
CGCGGACGCACAATATGAGCGTGATGAGGCGCTACGGAACGCGTGGGTGG
ACCCCGACATCCAGAGAATACTGTGGCTCGACTTAGCCTTGTACGAGCAC
GCAACCATGGTAAACGCGAAGCAGCTGGCGCACTACGATCTAAAGGAGGT
GGCATCAGTTGGGCCACCATAG
back to top