mRNA_S-dermatodea_contig1091.613.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig1091.613.1 vs. uniprot
Match: D8LU99_ECTSI (Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU99_ECTSI) HSP 1 Score: 181 bits (458), Expect = 3.450e-51 Identity = 82/96 (85.42%), Postives = 89/96 (92.71%), Query Frame = 1
Query: 1 MRDWGRVLLAMETRAARKYWQMPNGNGVYDAFFSSHRMVGMVASLEAVQLTWFGDNVEFVHCINMLPFTPITEELLPRDFMEQEWPVLTTAFDNRD 288
M+DWGRVLLAME RAARKYWQMP NGVYD++FSSHRMVGMVASLEAVQLTWFGDNVE+VHCINM+PFTPITE+LL RDFMEQEWPVL AFD R+
Sbjct: 644 MKDWGRVLLAMEVRAARKYWQMPRHNGVYDSYFSSHRMVGMVASLEAVQLTWFGDNVEYVHCINMMPFTPITEDLLHRDFMEQEWPVLEAAFDGRE 739
BLAST of mRNA_S-dermatodea_contig1091.613.1 vs. uniprot
Match: A0A6H5JC22_9PHAE (Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC22_9PHAE) HSP 1 Score: 178 bits (452), Expect = 4.970e-50 Identity = 80/95 (84.21%), Postives = 88/95 (92.63%), Query Frame = 1
Query: 4 RDWGRVLLAMETRAARKYWQMPNGNGVYDAFFSSHRMVGMVASLEAVQLTWFGDNVEFVHCINMLPFTPITEELLPRDFMEQEWPVLTTAFDNRD 288
+DWGRVLLAME RAARKYWQMP NGVYD++FSSHRMVGMVASLEAVQLTWFGDNVE+VHC+NM+PFTPITE+LL RDFMEQEWPVL AFD R+
Sbjct: 645 KDWGRVLLAMEVRAARKYWQMPRHNGVYDSYFSSHRMVGMVASLEAVQLTWFGDNVEYVHCVNMMPFTPITEDLLHRDFMEQEWPVLEAAFDGRE 739
BLAST of mRNA_S-dermatodea_contig1091.613.1 vs. uniprot
Match: A0A835YW37_9STRA (Endo-1,3(4)-beta-glucanase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW37_9STRA) HSP 1 Score: 132 bits (333), Expect = 1.320e-35 Identity = 58/96 (60.42%), Postives = 74/96 (77.08%), Query Frame = 1
Query: 1 MRDWGRVLLAMETRAARKYWQMPNGNGVYDAFFSSHRMVGMVASLEAVQLTWFGDNVEFVHCINMLPFTPITEELLPRDFMEQEWPVLTTAFDNRD 288
+RDWGR+LLA E R+ KYW M N + VYD+ F+S+RMVG+V L+AV +TWFGDNVE+VH INM+PFTPI+ ELLP +M +EWP+L TA D
Sbjct: 169 LRDWGRILLAGELRSTDKYWHMRNDSDVYDSIFASNRMVGVVGGLDAVDVTWFGDNVEYVHGINMMPFTPISAELLPYGYMREEWPMLATALTRED 264
BLAST of mRNA_S-dermatodea_contig1091.613.1 vs. uniprot
Match: A0A7S2UYV8_9STRA (Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYV8_9STRA) HSP 1 Score: 119 bits (297), Expect = 1.260e-31 Identity = 55/92 (59.78%), Postives = 66/92 (71.74%), Query Frame = 1
Query: 7 DWGRVLLAMETRAARKYWQMPNGNGVYDAFFSSHRMVGMVASLEAVQLTWFGDNVEFVHCINMLPFTPITEELLPRDFMEQEWPVLTTAFDN 282
DWGRVLLAME RAA+ YWQMP G+ VYDA F+ +RMVG V L+ V TWFG+N F+H I +PFTPITEE L FM QEW V+ + D+
Sbjct: 99 DWGRVLLAMEIRAAKMYWQMPQGSKVYDAAFAQNRMVGNVGGLDVVYSTWFGNNPAFIHGIQYMPFTPITEEYLEACFMVQEWEVIKSLADD 190
BLAST of mRNA_S-dermatodea_contig1091.613.1 vs. uniprot
Match: A0A835ZFG2_9STRA (Endo-1,3(4)-beta-glucanase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFG2_9STRA) HSP 1 Score: 116 bits (290), Expect = 2.190e-28 Identity = 50/91 (54.95%), Postives = 67/91 (73.63%), Query Frame = 1
Query: 1 MRDWGRVLLAMETRAARKYWQMPNGNGVYDAFFSSHRMVGMVASLEAVQLTWFGDNVEFVHCINMLPFTPITEELLPRDFMEQEWPVLTTA 273
+RDWGRVL ME RA YWQMP+G +YD+ F+S++M G+V +L+ + TWFGD E++H INM+PFTPITE LL F+ +E+PVL A
Sbjct: 325 LRDWGRVLAQMELRAGHTYWQMPSGTPIYDSNFASNKMAGVVGALDVICNTWFGDKFEYIHAINMMPFTPITEALLRPPFVAEEYPVLARA 415
BLAST of mRNA_S-dermatodea_contig1091.613.1 vs. uniprot
Match: A0A7S2G3W6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G3W6_9STRA) HSP 1 Score: 108 bits (271), Expect = 6.560e-28 Identity = 49/94 (52.13%), Postives = 68/94 (72.34%), Query Frame = 1
Query: 1 MRDWGRVLLAMETRAARKYWQMPNGNGVYDAFFSSHRMVGMVASLEAVQLTWFGDNVEFVHCINMLPFTPITEELLPRDFMEQEWPVLTTAFDN 282
M DWGR+LLA E RAA YWQM + + VY F +MVG+V S +A TWFG+N E+VH INM+PFTPITEELL ++++++E+P+L ++
Sbjct: 36 MSDWGRLLLATEMRAAHLYWQMMDEDTVYPKAFKETKMVGIVGSADAKVFTWFGNNPEYVHGINMMPFTPITEELLRKEYVKEEYPILEPRLED 129
BLAST of mRNA_S-dermatodea_contig1091.613.1 vs. uniprot
Match: A0A836CER9_9STRA (Endo-1,3(4)-beta-glucanase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CER9_9STRA) HSP 1 Score: 113 bits (282), Expect = 4.510e-27 Identity = 49/83 (59.04%), Postives = 63/83 (75.90%), Query Frame = 1
Query: 40 RAARKYWQMPNGNGVYDAFFSSHRMVGMVASLEAVQLTWFGDNVEFVHCINMLPFTPITEELLPRDFMEQEWPVLTTAFDNRD 288
R+ KYW M N + VYD+ F+S+RMVG+V L+AV +TWFGDNVE+VH INM+PFTPI+ ELLP +M +EWP+L TA D
Sbjct: 892 RSTDKYWHMRNDSDVYDSIFASNRMVGVVGGLDAVDVTWFGDNVEYVHGINMMPFTPISAELLPYGYMREEWPMLATALTRED 974
BLAST of mRNA_S-dermatodea_contig1091.613.1 vs. uniprot
Match: A0A3R7V284_9FLAO (Endo-1,3(4)-beta-glucanase n=1 Tax=Crocinitomicaceae bacterium TMED209 TaxID=1986724 RepID=A0A3R7V284_9FLAO) HSP 1 Score: 111 bits (277), Expect = 2.130e-26 Identity = 48/97 (49.48%), Postives = 74/97 (76.29%), Query Frame = 1
Query: 1 MRDWGRVLLAMETRAARKYWQMPNGNGVYDAFFSSHRMVGMVASLEAVQLTWFGDNVEFVHCINMLPFTPITEELLPRDFMEQEWPVLTTAFDNRDL 291
+RD GR++LA E R+ ++YWQ+ + +G+Y+ F+S+++VG++ S + T+FG N EF+HCI MLPFTPITEELL +++E+E+PVL TA DN +
Sbjct: 596 LRDLGRLMLATEIRSTQRYWQVDSNDGIYEELFASNKVVGVLWSTKVDYGTFFGANTEFIHCIQMLPFTPITEELLEPEWIEEEYPVLQTALDNPSI 692
BLAST of mRNA_S-dermatodea_contig1091.613.1 vs. uniprot
Match: A0A356MMD5_9FLAO (Endo-1,3(4)-beta-glucanase (Fragment) n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A356MMD5_9FLAO) HSP 1 Score: 109 bits (273), Expect = 4.020e-26 Identity = 48/97 (49.48%), Postives = 75/97 (77.32%), Query Frame = 1
Query: 1 MRDWGRVLLAMETRAARKYWQMPNGNGVYDAFFSSHRMVGMVASLEAVQLTWFGDNVEFVHCINMLPFTPITEELLPRDFMEQEWPVLTTAFDNRDL 291
+RD GR++LA E R+ ++YWQ+ + +G+Y+ F+S+++VG++ S + T+FG N EF+HCI MLPFTPITEELL D++E+E+PVL TA +N ++
Sbjct: 367 LRDLGRLMLATEIRSTQQYWQVDSNDGIYEEPFASNKVVGVLWSTKVDYGTFFGANTEFIHCIQMLPFTPITEELLEPDWIEEEYPVLVTALNNPNI 463
BLAST of mRNA_S-dermatodea_contig1091.613.1 vs. uniprot
Match: A0A355FT92_9FLAO (Endo-1,3(4)-beta-glucanase n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A355FT92_9FLAO) HSP 1 Score: 109 bits (272), Expect = 1.000e-25 Identity = 48/97 (49.48%), Postives = 74/97 (76.29%), Query Frame = 1
Query: 1 MRDWGRVLLAMETRAARKYWQMPNGNGVYDAFFSSHRMVGMVASLEAVQLTWFGDNVEFVHCINMLPFTPITEELLPRDFMEQEWPVLTTAFDNRDL 291
+RD GR++LA E R+ +KYWQ+ +G+G+YD ++S+++VG++ S + T+FG N EF+HCI MLPFTPITE+LL ++++E+PVL TA DN +
Sbjct: 541 IRDLGRLMLATEIRSTQKYWQVDSGDGIYDEPYASNKVVGVLWSTKVDYGTFFGANTEFIHCIQMLPFTPITEDLLEPAWIDEEYPVLETALDNPSI 637 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1091.613.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1091.613.1 >prot_S-dermatodea_contig1091.613.1 ID=prot_S-dermatodea_contig1091.613.1|Name=mRNA_S-dermatodea_contig1091.613.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=97bp MRDWGRVLLAMETRAARKYWQMPNGNGVYDAFFSSHRMVGMVASLEAVQLback to top mRNA from alignment at S-dermatodea_contig1091:15220..16453+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig1091.613.1 ID=mRNA_S-dermatodea_contig1091.613.1|Name=mRNA_S-dermatodea_contig1091.613.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1234bp|location=Sequence derived from alignment at S-dermatodea_contig1091:15220..16453+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig1091:15220..16453+ >mRNA_S-dermatodea_contig1091.613.1 ID=mRNA_S-dermatodea_contig1091.613.1|Name=mRNA_S-dermatodea_contig1091.613.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=582bp|location=Sequence derived from alignment at S-dermatodea_contig1091:15220..16453+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |