mRNA_S-dermatodea_contig1091.611.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig1091.611.1 vs. uniprot
Match: D8LU98_ECTSI (VOC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU98_ECTSI) HSP 1 Score: 487 bits (1253), Expect = 3.350e-165 Identity = 257/395 (65.06%), Postives = 301/395 (76.20%), Query Frame = 3
Query: 162 LLLLGTCGSVR--RAAAFGLGVRPAGSLQQHER-ASCSANRMRMSEDTTEFDGA----------VGRGPFLRNSAVLLAG-------AGLAGPSRPDSANAIGELVEFRDQERFAQHATVQVPDMAAALKFYVDGVGMKVLRTRAGPQFNTTVVGFGPEALQVPPSFVFGVSSMRNYGGHFTVELNSQEEVVGG-----EEIGLFFDPGNGVQYLQMAVDNYRISTIIKAGGIIEYGYGYLLVLAPGGLRLAILMGDRRDPPMFVAVKVKDLKKSVQWYTDVAGMSKFPYPLARAPGSPFEPLQPKDSVFMAYEGDAFGVLLVPAARGETVNPGGVFSASFLAEDVGKIAEDVGGTVDADSAWGATRSVSVSDPDGYAVKFVEYSSWQKGLPPLL 1271
LL+L TCG +R +AA FGLG RP+ +QQ + A+CSA ++ MSE + GRG FLRNSA LAG A AG P +A AIG+L EF+DQ RFAQHATVQVPDMAAALKFYVDGVGMKV+RTRAGP FNTTVVGFGPEAL+VPPSFVFGVSS YGGHFT+ELNSQ+E G E++ F+DPGNGVQ+LQ+AVD+YRIS ++KAGGIIE GYGYL VLAPGGLRL +L G RRDPPMF+AVKVKD+K+SVQWYTDVAGM+KFP+P AR GSPFEP QP SVFMAYEG+AFGV+L+PAA+G+ +NPG V S + LAEDV KIAE +GG V DSA G +SV+V+DPDGY VKFVEYS W+ LP L+
Sbjct: 16 LLVLSTCGDIRVWQAAGFGLGARPSVPVQQKQHTATCSATQVLMSESQASDRSSSRRGEGGAEPTGRGDFLRNSAAFLAGGSAAIAAATTAGAGFPSAAEAIGDLYEFKDQARFAQHATVQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSTNGYGGHFTLELNSQKEEAGAAEDGEEDVDFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSGSRRDPPMFLAVKVKDMKRSVQWYTDVAGMTKFPFPRAREAGSPFEPEQPAGSVFMAYEGEAFGVVLIPAAKGDQINPGSVVSVAVLAEDVEKIAESLGGKVSVDSARGGGKSVAVADPDGYGVKFVEYSDWRGQLPRLV 410
BLAST of mRNA_S-dermatodea_contig1091.611.1 vs. uniprot
Match: A0A835YIX3_9STRA (VOC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIX3_9STRA) HSP 1 Score: 258 bits (659), Expect = 1.110e-76 Identity = 158/315 (50.16%), Postives = 199/315 (63.17%), Query Frame = 3
Query: 345 AVLLAGAGLAGPSRPDSANAIGELVEFRDQERFAQHATVQVPDMAAALKFYVDGVGMKVLRTRA--GPQFNTTVVGFGPEALQVPPSFVFGVSSMRNYGGHFTVELNSQEEVVGGEEIGLFFDPGNGVQYLQMAVDNYRISTIIKAGGIIEYGYGYLLVLAPGGLRLAILMGDRRDPPMFVAVKVKDLKKSVQWYTDVAGMSKFPYPLAR-APGSPFEPLQPKDSVFMAYEGDAFGVLLVPAARGET--VNPGGVFSA-SFLAEDVGKIAEDVG---GTVDADSAWGATRSVSV-SDPDGYAVKFVEYSSWQKGL 1259
AVL+AG+ P+ NAIGEL E Q+RF QHA V VPD+ AA++FY +G+GM+V+R+RA NTT V +GPE L VP + GVSS YGGHF++EL E+ F+DPGNGVQY+Q+AVD YRIS +I AGG + +GYG GL++ + G RRDP MFVA+KV DLKKSVQWYTDV GMS+FPYP AR A S FEP QPK SVFM Y+ D GVLL+P + + + G +S + LA DV ED G G + A A G + SV+V +DPDGY VEY + + L
Sbjct: 83 AVLVAGS-------PEGCNAIGELPETLSQKRFVQHAVVNVPDIEAAIRFYTEGLGMRVVRSRADTSANTNTTFVAYGPEQLTVPKDWAPGVSSFAAYGGHFSLELVGPLNPPADGELP-FYDPGNGVQYIQIAVDTYRISKVIAAGGEVIFGYG--------GLKINLFSGVRRDPMMFVALKVSDLKKSVQWYTDVLGMSQFPYPKAREAVDSVFEPKQPKGSVFMGYDEDGSGVLLIPKDKKDKAPIVVGSAYSKLAVLATDV----EDEGKRVGAMYAGKAPGTSTSVAVVADPDGYTTVLVEYDDFAREL 377
BLAST of mRNA_S-dermatodea_contig1091.611.1 vs. uniprot
Match: A0A4D9D405_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D405_9STRA) HSP 1 Score: 222 bits (566), Expect = 3.110e-63 Identity = 121/253 (47.83%), Postives = 164/253 (64.82%), Query Frame = 3
Query: 378 PSRPDSANAIGELVEFRDQERFAQHATVQVPDMAAALKFYVDGVGMKVLRTRAGPQFNTTVVGFGPEALQVPPSFVFGVSSMRNYGGHFTVELNSQEEVVGGEEIGLFFDPGNGVQYLQMAVDNYRISTIIKAGGIIEYGYGYLLVLAPGGLRLAILMGDRRDPPMFVAVKVKDLKKSVQWYTDVAGMSKFPYPLARAPGSPFEPLQPKDSVFMAYEGDAFGVLLVPAARGET---VNPGGVFSA-SFLAEDV 1124
PSRP++ANAIGEL E+ RF QH + VPDMAAAL FY+DG+ M+VLR+R N+T VG+GPE L+ P + GVSS YG HF +ELN + G+ L DPGN YLQ+AV + R+S + +AGG I+ YG++LV +PGGLR +++G RRDP M +A+ V D++K+ +Y + GM + PYPL+R P S +EP QPK S F+A+ D FG+LL+P + E V GGV + L DV
Sbjct: 52 PSRPNAANAIGELPEWASNPRFTQHLVINVPDMAAALSFYIDGLQMQVLRSRLVGGQNSTFVGYGPETLKTPKGWYPGVSSFSMYGAHFALELNEVLKTEEGDTPVL--DPGNAAAYLQLAVPSLRLSKLAEAGGKIKSAYGWVLVDSPGGLRHQVIVGMRRDPIMMLALNVPDVQKASHFYVNSLGMQEQPYPLSRIPESIYEPKQPKGSRFLAFNEDGFGILLLPLPKKEAKAGVRLGGVVDKLAILGTDV 302
BLAST of mRNA_S-dermatodea_contig1091.611.1 vs. uniprot
Match: A0A7S2UZ58_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ58_9STRA) HSP 1 Score: 214 bits (545), Expect = 2.860e-61 Identity = 124/280 (44.29%), Postives = 167/280 (59.64%), Query Frame = 3
Query: 309 GAVGRGPFLRNSAVLLAGAGLA-GPSRPDSANAIGELVEFRDQERFAQHATVQVPDMAAALKFYVDGVGMKVLRTRAGPQFNTTVVGFGPEALQVPPSFVFGVSSMRNYGGHFTVELNSQEEVVGGEEIGLFFD-PGNGVQYLQMAVDNYRISTIIKAGGIIEYGYGYLLVLAPGGLRLAILMGDRRDPPMFVAVKVKDLKKSVQWYTDVAGMSKFPYPLARAPGSPFEPLQPKDSVFMAYEGDAFGVLLVPAARGETVNPGGVFSASFLA----EDVGK 1130
G R ++ +S+ +L L+ G S+P + IGEL EF D +F QH V+V DM AAL+F + G+ M VLRTR N T VG+GPE L P FV GVSS YGGHF++EL S + E+ F + PG +QY+Q+A N +IKAGGII GYGY V+AP GL + + D RDP ++A+KVKD+KKS+ +Y V GM K Y + R S FEP+QPK SV M Y ++ +LL+PA R +T+ G VF+ + ED+GK
Sbjct: 1 GGCDRRQWITSSSAILGSVALSQGLSQPGWS--IGELPEFSDDAKFIQHMVVRVEDMDAALEFCLKGLQMSVLRTRLVDGINGTFVGYGPEQLSPPEDFVPGVSSFARYGGHFSLELVSPTTPL--EQRKPFANNPGTALQYIQLAAPNLSFGKLIKAGGIITGGYGYADVIAPFGLPFRVFVADTRDPAQYIAMKVKDMKKSIAYYEKVLGMKKLSYEMLRVKDSSFEPIQPKGSVVMGYNENSCNILLIPATRQDTIEVGNVFAKLAIVTNGVEDIGK 276
BLAST of mRNA_S-dermatodea_contig1091.611.1 vs. uniprot
Match: A0A0G4EHT2_VITBC (VOC domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EHT2_VITBC) HSP 1 Score: 187 bits (476), Expect = 1.050e-50 Identity = 119/303 (39.27%), Postives = 165/303 (54.46%), Query Frame = 3
Query: 405 IGELVEFRDQERFAQHATVQVPDMAAALKFYVDGVGMKVLRTRAGPQF--NTTVVGFGPEAL---QVPPSFVFGVSSMRNYGGHFTVELNSQE---EVVGGEE----IGLFFDPGNGVQYLQMAVDNYRISTIIKAGGIIEYGYGYLLVLAPGGLRLAILMGDRRDPPMFVAVKVKDLKKSVQWYTDVAGMSKFPYPLARA-PGSPFEPLQPKDSVFMAYEGDAFGVLLVPA----ARGETVNPGGVFSA-SFLAEDVGKIAEDVGGTVDADSAWGATRSVSVSDPDGYAVKFVEYSSWQKGL 1259
+G L E ++ ER+ QHA V VP M AL FY G+GM+V+RTR P N T VG+GPE L +V F G+SS YG HFT+EL + E+ +E + ++PGNGVQ+LQ+A+ R+S + + GG I YG++ V APGGL L I++G+RRDP MF VKDL + +Y GM + PY AR P SP EP QP++S +M Y D FG+LLV A+ + G VF + L+ +V + + T + D GY + VEY ++K L
Sbjct: 1 MGTLPETQNLERYIQHAVVNVPKMDDALNFYTRGLGMRVIRTRTNPAKTNNVTFVGYGPETLDLKRVENGFRPGISSYNEYGAHFTLELIEKRVPPELKSDDEDAQPVVQAYEPGNGVQFLQIALPFLRVSQLAETGGNIRRAYGWIEVDAPGGLPLRIIIGERRDPFMFACFTVKDLSAAKSFYETRLGMRELPYQKARYNPDSPLEPKQPQESAYMGYSEDTFGLLLVQQDKKIAKKTPIEVGSVFDKLAILSRNVVEEGPSLNAGFTGPVPGIGTNVAAFKDAQGYGLVLVEYDDFEKEL 303
BLAST of mRNA_S-dermatodea_contig1091.611.1 vs. uniprot
Match: A0A8J5XKT4_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XKT4_DIALT) HSP 1 Score: 102 bits (253), Expect = 1.520e-19 Identity = 92/284 (32.39%), Postives = 133/284 (46.83%), Query Frame = 3
Query: 459 VQVPDMAAALKFYVDGVGMKVLRT-RAGPQ-FNTTVVGFGPEALQVPPSFVFGVSSMRNYGGHFTVELNSQEEVVGGEEIGLFFDP-----GNGVQYLQMAVDNYRISTIIKAGGIIEYGYGYLLVLAPGGLRLAILMGDRRDPPMFVAVKVKDLKKSVQWYTDVAGMSKFPYPLARAPGSPF---------------EPLQPK---DSVFMAY----EGDAFGVLLVPAARGETVNPGGVFSASFLAEDVGKI-AEDVGGTVDADSAWGATRSVSVSDPDGYA 1220
V+VPD+AAA +F++DG+ M LR+ R GP VVG+G E L + GG F++EL Q L D + Y+Q+ V N RIS ++++GG IE YGY+ V +PGGL + ++ RRDP FVA++V D++ + +Y GM + P P R P + L PK SV M + D+ GVLLVP + T P G+ A + V + A DV A R +++D DG+A
Sbjct: 131 VRVPDLAAARRFWLDGLKMSELRSSRVGPDGAEGIVVGYGREGLD------------EDDGGKFSLEL-VQASARAPAPARLALDAPDAEAAGALLYVQLRVPNVRISGLVQSGGAIESAYGYVEVTSPGGLAVRVITAPRRDPVEFVALRVPDVEAAAAYYERAFGMRRIPSPPRRTERGPGVLGTGLFGREYEVQDDVLAPKVLYGSVLMVSACCGQADSAGVLLVPPSA--TTAPLGLRLAGGDGDPVLTVRAADVS----------AARKAALADADGFA 389
BLAST of mRNA_S-dermatodea_contig1091.611.1 vs. uniprot
Match: A0A5B8MYG2_9CHLO (Putative glyoxalase n=3 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MYG2_9CHLO) HSP 1 Score: 102 bits (253), Expect = 2.040e-19 Identity = 86/291 (29.55%), Postives = 133/291 (45.70%), Query Frame = 3
Query: 441 FAQHATVQVPDMAAALKFYVDGVGMKVLRTRAGPQFNTTVVGFGPEALQVPPSFVFGVSSMRNYGGHFTVELNSQEEVVGGEEIGLFFDPGNGVQYLQMAVDN-YRISTIIKAGGIIEYGYGYLLVLAPGGLRLAILMGDRRDPPMFVAVKVKDLKKSVQWYTDVAGMSKFPYPLARAPGSPFEPLQPKDSVFMAYEG--DAFGVLLVPAARGETVNPGGVFSASFLAEDVG-------------KIAEDVGGTVDADSAWGATRSVSVSDP-DGYAVKFVEYSSWQKGLP 1262
F QHA ++V D+ ++KF+ G+GMKV RTR F V FGPE L GG F +EL N Q+ Q A+ N R++ + +GG I +G+GY + AP G ++ + + +RRDP V V V D+ + ++Y V GM+ + G FEP + K SV M Y + G+LLVP + + + + L +DV K +V GT G T+ VS++ P +G + FV+Y+ +++ P
Sbjct: 154 FLQHAVLEVKDLDKSVKFWTQGLGMKVNRTRGNQAF----VSFGPETLTAAD------------GGKFALELVENPSTT----------QDNSGQFFQFALSNSLRVNRVANSGGDITFGFGYFEITAPDGYKVVVYIENRRDPFDLVGVYVNDVDAAAKYYERVFGMAADRSYGDKEVGR-FEPARIKGSVLMTYGAADENTGILLVPKSSSKEASSVQSIKIAVLDKDVNERKEKLVAAGLTPKFTGEVPGT-------GGTK-VSLAVPREGVPLVFVDYNDFEREQP 409
BLAST of mRNA_S-dermatodea_contig1091.611.1 vs. uniprot
Match: A0A835Z3V5_9STRA (Metal ion binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3V5_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 8.280e-12 Identity = 76/292 (26.03%), Postives = 132/292 (45.21%), Query Frame = 3
Query: 441 FAQHATVQVPDMAAALKFYVDGVGMKVLRTRAGPQFNTTVVGFGPEALQVPPSFVFGVSSMRNYGGHFTVELNSQEEVVGGEEIGLFFDPGNGVQYLQMAVDNYRISTIIKA----GGIIEYGY---GYLLVLAPGGLRLAILMGDRRDPPMFVAVKVKDLKKSVQWYTDVAGMSKFPYPLARAPGSPFEPLQPKDSVFMAYEGDAFGVLLV----PAARGE--------TVNPGGVFSASFLAEDVGKIAEDVGGTVDADSAWGATRSVSVSDPDGYAVKFVEYSSWQKGL 1259
F QHA ++V D++A +KF+ +G+GMK++R R T + +G E L GG+F +EL ++ V + G+ +YL + + + ++ I+A G I+ + + ++ + +P G+ + + G RRDP VA D+K + +Y D M + L + G PL D + Y+G V+LV P +G+ T N G+ A + GK+ E VG ++ T+ DP+ + V FV+Y ++K L
Sbjct: 52 FIQHAVLKVNDLSANIKFWCEGLGMKLVRERTIDNVRTVFLAYGKETLS------------SGDGGYFALELTQAQKPV--------YGVGSSFKYLGLTLPDKPMTLGIRATDAGGEIVPHWFLEKDFVEIKSPDGVPVRVKSGARRDPVTVVAFGSNDVKATQAYYKDTLRMKEQRGGLLKLLG----PLA-GDGPVLGYDGSDVSVVLVKEDAPVTQGQIFDKIAILTKNTVGMADA-ISKTNYGKV-EFVG-----EAPGIGTKVADTIDPEFHDVVFVDYDDFEKEL 311
BLAST of mRNA_S-dermatodea_contig1091.611.1 vs. uniprot
Match: A0A6H5K0L5_9PHAE (VOC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0L5_9PHAE) HSP 1 Score: 76.3 bits (186), Expect = 3.740e-11 Identity = 75/294 (25.51%), Postives = 123/294 (41.84%), Query Frame = 3
Query: 441 FAQHATVQVPDMAAALKFYVDGVGMKVLRTRAGPQFNTTVVGFGPEALQVPPSFVFGVSSMRNYGGHFTVELNSQEEVVGGEEIGLFFDPGNGVQYLQMAVDNYRISTIIK---AGG-IIEYGYG---YLLVLAPGGLRLAILMGDRRDPPMFVAVKVKDLKKSVQWYTDVAGMSKFPYPLARAPGSPFEPLQPKDSVFMAYEGDAFGVLLVPAARGETVNPGGVFSA-SFLAEDVGKIAEDVGGTVDADSAWG-----------ATRSVSVSDPDGYAVKFVEYSSWQKGLPP 1265
F QHA +VPDM +KF+ +G+GMKV+R R V +G E+LQ GG+F++EL + G + G QYL + + + + K AGG ++ + +G ++ +P G + + G RRDP VA + K+ ++ +V GM + L + G PL Y+ V L P + GG F + L +D +A+ V + A + G T+ + D +G V FV+Y ++ + P
Sbjct: 102 FVQHAVFKVPDMDEEVKFFTEGLGMKVVRQREVNGVRNVFVAYGDESLQTKD------------GGYFSLELVYDPKAPPG------YSTGGPFQYLGLTLSSTLATIAYKVDAAGGTVVPHWFGTKDFVEATSPSGTTVRVKEGKRRDPFSVVAFGTQFPDKATAYFHNVLGMKEQDAGLLKVLG----PLAGDALRLSGYDKAGVSVALNPVDS--KIFEGGTFGKLAVLTKDTKALADKVSASGGAKTGGGDVLFAGEVPGIGTKVANTIDFEGRGVVFVDYDDFEGEMKP 371
BLAST of mRNA_S-dermatodea_contig1091.611.1 vs. uniprot
Match: A0A2K3MR83_TRIPR (Lactoylglutathione lyase (Fragment) n=3 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MR83_TRIPR) HSP 1 Score: 58.5 bits (140), Expect = 1.380e-5 Identity = 56/217 (25.81%), Postives = 95/217 (43.78%), Query Frame = 3
Query: 330 FLRNSAVLLAGAGLAGPSRPDSANAIGELVEFRDQERFAQHATVQVPDMAAALKFYVDGVGMKVLRTRAGPQ--FNTTVVGFGPEALQVPPSFVFGVSSMRNYGGHFTVELNSQEEVVGGEEIGLFFDPGNGVQYLQMAVDNY-RISTIIKA-GGIIEYGYGYL--------LVLAPGGLRLAILMGDRRDPPMF-VAVKVKDLKKSVQWYTDVAGM 941
FLRN + + +A + SA L + +R H +V D+ ++KFY +G+GMKVLR R P+ + +G+GPE HF+VEL + +D G G + +A+D+ R+ I++A GG I G + ++ P G + +L P+ V ++V DL +S+++Y G+
Sbjct: 15 FLRNDSRCM--RVMASRNMSQSATQENALDWVKQDKRRMLHVVYRVGDLDKSIKFYTEGLGMKVLRKRDRPEERYMNAFLGYGPE------------------DAHFSVELTYNYGIE-------TYDIGTGFGHFGIAMDDISRVVDIVRAKGGTITREPGPVNGGNSNIAVIEDPDGYKFELLERSPCPEPLCKVMLRVGDLDRSIKFYEKAVGL 204 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1091.611.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1091.611.1 >prot_S-dermatodea_contig1091.611.1 ID=prot_S-dermatodea_contig1091.611.1|Name=mRNA_S-dermatodea_contig1091.611.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=409bp MAAMRMAPLKPSQLLPDGWDKGVTFVPSRLRRPALRVSLLLLGTCGSVRRback to top mRNA from alignment at S-dermatodea_contig1091:453..3227- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig1091.611.1 ID=mRNA_S-dermatodea_contig1091.611.1|Name=mRNA_S-dermatodea_contig1091.611.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2775bp|location=Sequence derived from alignment at S-dermatodea_contig1091:453..3227- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig1091:453..3227- >mRNA_S-dermatodea_contig1091.611.1 ID=mRNA_S-dermatodea_contig1091.611.1|Name=mRNA_S-dermatodea_contig1091.611.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2454bp|location=Sequence derived from alignment at S-dermatodea_contig1091:453..3227- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |