mRNA_S-dermatodea_contig1091.611.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig1091.611.1
Unique NamemRNA_S-dermatodea_contig1091.611.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig1091.611.1 vs. uniprot
Match: D8LU98_ECTSI (VOC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU98_ECTSI)

HSP 1 Score: 487 bits (1253), Expect = 3.350e-165
Identity = 257/395 (65.06%), Postives = 301/395 (76.20%), Query Frame = 3
Query:  162 LLLLGTCGSVR--RAAAFGLGVRPAGSLQQHER-ASCSANRMRMSEDTTEFDGA----------VGRGPFLRNSAVLLAG-------AGLAGPSRPDSANAIGELVEFRDQERFAQHATVQVPDMAAALKFYVDGVGMKVLRTRAGPQFNTTVVGFGPEALQVPPSFVFGVSSMRNYGGHFTVELNSQEEVVGG-----EEIGLFFDPGNGVQYLQMAVDNYRISTIIKAGGIIEYGYGYLLVLAPGGLRLAILMGDRRDPPMFVAVKVKDLKKSVQWYTDVAGMSKFPYPLARAPGSPFEPLQPKDSVFMAYEGDAFGVLLVPAARGETVNPGGVFSASFLAEDVGKIAEDVGGTVDADSAWGATRSVSVSDPDGYAVKFVEYSSWQKGLPPLL 1271
            LL+L TCG +R  +AA FGLG RP+  +QQ +  A+CSA ++ MSE       +           GRG FLRNSA  LAG       A  AG   P +A AIG+L EF+DQ RFAQHATVQVPDMAAALKFYVDGVGMKV+RTRAGP FNTTVVGFGPEAL+VPPSFVFGVSS   YGGHFT+ELNSQ+E  G      E++  F+DPGNGVQ+LQ+AVD+YRIS ++KAGGIIE GYGYL VLAPGGLRL +L G RRDPPMF+AVKVKD+K+SVQWYTDVAGM+KFP+P AR  GSPFEP QP  SVFMAYEG+AFGV+L+PAA+G+ +NPG V S + LAEDV KIAE +GG V  DSA G  +SV+V+DPDGY VKFVEYS W+  LP L+
Sbjct:   16 LLVLSTCGDIRVWQAAGFGLGARPSVPVQQKQHTATCSATQVLMSESQASDRSSSRRGEGGAEPTGRGDFLRNSAAFLAGGSAAIAAATTAGAGFPSAAEAIGDLYEFKDQARFAQHATVQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSTNGYGGHFTLELNSQKEEAGAAEDGEEDVDFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSGSRRDPPMFLAVKVKDMKRSVQWYTDVAGMTKFPFPRAREAGSPFEPEQPAGSVFMAYEGEAFGVVLIPAAKGDQINPGSVVSVAVLAEDVEKIAESLGGKVSVDSARGGGKSVAVADPDGYGVKFVEYSDWRGQLPRLV 410          
BLAST of mRNA_S-dermatodea_contig1091.611.1 vs. uniprot
Match: A0A835YIX3_9STRA (VOC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIX3_9STRA)

HSP 1 Score: 258 bits (659), Expect = 1.110e-76
Identity = 158/315 (50.16%), Postives = 199/315 (63.17%), Query Frame = 3
Query:  345 AVLLAGAGLAGPSRPDSANAIGELVEFRDQERFAQHATVQVPDMAAALKFYVDGVGMKVLRTRA--GPQFNTTVVGFGPEALQVPPSFVFGVSSMRNYGGHFTVELNSQEEVVGGEEIGLFFDPGNGVQYLQMAVDNYRISTIIKAGGIIEYGYGYLLVLAPGGLRLAILMGDRRDPPMFVAVKVKDLKKSVQWYTDVAGMSKFPYPLAR-APGSPFEPLQPKDSVFMAYEGDAFGVLLVPAARGET--VNPGGVFSA-SFLAEDVGKIAEDVG---GTVDADSAWGATRSVSV-SDPDGYAVKFVEYSSWQKGL 1259
            AVL+AG+       P+  NAIGEL E   Q+RF QHA V VPD+ AA++FY +G+GM+V+R+RA      NTT V +GPE L VP  +  GVSS   YGGHF++EL          E+  F+DPGNGVQY+Q+AVD YRIS +I AGG + +GYG        GL++ +  G RRDP MFVA+KV DLKKSVQWYTDV GMS+FPYP AR A  S FEP QPK SVFM Y+ D  GVLL+P  + +   +  G  +S  + LA DV    ED G   G + A  A G + SV+V +DPDGY    VEY  + + L
Sbjct:   83 AVLVAGS-------PEGCNAIGELPETLSQKRFVQHAVVNVPDIEAAIRFYTEGLGMRVVRSRADTSANTNTTFVAYGPEQLTVPKDWAPGVSSFAAYGGHFSLELVGPLNPPADGELP-FYDPGNGVQYIQIAVDTYRISKVIAAGGEVIFGYG--------GLKINLFSGVRRDPMMFVALKVSDLKKSVQWYTDVLGMSQFPYPKAREAVDSVFEPKQPKGSVFMGYDEDGSGVLLIPKDKKDKAPIVVGSAYSKLAVLATDV----EDEGKRVGAMYAGKAPGTSTSVAVVADPDGYTTVLVEYDDFAREL 377          
BLAST of mRNA_S-dermatodea_contig1091.611.1 vs. uniprot
Match: A0A4D9D405_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D405_9STRA)

HSP 1 Score: 222 bits (566), Expect = 3.110e-63
Identity = 121/253 (47.83%), Postives = 164/253 (64.82%), Query Frame = 3
Query:  378 PSRPDSANAIGELVEFRDQERFAQHATVQVPDMAAALKFYVDGVGMKVLRTRAGPQFNTTVVGFGPEALQVPPSFVFGVSSMRNYGGHFTVELNSQEEVVGGEEIGLFFDPGNGVQYLQMAVDNYRISTIIKAGGIIEYGYGYLLVLAPGGLRLAILMGDRRDPPMFVAVKVKDLKKSVQWYTDVAGMSKFPYPLARAPGSPFEPLQPKDSVFMAYEGDAFGVLLVPAARGET---VNPGGVFSA-SFLAEDV 1124
            PSRP++ANAIGEL E+    RF QH  + VPDMAAAL FY+DG+ M+VLR+R     N+T VG+GPE L+ P  +  GVSS   YG HF +ELN   +   G+   L  DPGN   YLQ+AV + R+S + +AGG I+  YG++LV +PGGLR  +++G RRDP M +A+ V D++K+  +Y +  GM + PYPL+R P S +EP QPK S F+A+  D FG+LL+P  + E    V  GGV    + L  DV
Sbjct:   52 PSRPNAANAIGELPEWASNPRFTQHLVINVPDMAAALSFYIDGLQMQVLRSRLVGGQNSTFVGYGPETLKTPKGWYPGVSSFSMYGAHFALELNEVLKTEEGDTPVL--DPGNAAAYLQLAVPSLRLSKLAEAGGKIKSAYGWVLVDSPGGLRHQVIVGMRRDPIMMLALNVPDVQKASHFYVNSLGMQEQPYPLSRIPESIYEPKQPKGSRFLAFNEDGFGILLLPLPKKEAKAGVRLGGVVDKLAILGTDV 302          
BLAST of mRNA_S-dermatodea_contig1091.611.1 vs. uniprot
Match: A0A7S2UZ58_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ58_9STRA)

HSP 1 Score: 214 bits (545), Expect = 2.860e-61
Identity = 124/280 (44.29%), Postives = 167/280 (59.64%), Query Frame = 3
Query:  309 GAVGRGPFLRNSAVLLAGAGLA-GPSRPDSANAIGELVEFRDQERFAQHATVQVPDMAAALKFYVDGVGMKVLRTRAGPQFNTTVVGFGPEALQVPPSFVFGVSSMRNYGGHFTVELNSQEEVVGGEEIGLFFD-PGNGVQYLQMAVDNYRISTIIKAGGIIEYGYGYLLVLAPGGLRLAILMGDRRDPPMFVAVKVKDLKKSVQWYTDVAGMSKFPYPLARAPGSPFEPLQPKDSVFMAYEGDAFGVLLVPAARGETVNPGGVFSASFLA----EDVGK 1130
            G   R  ++ +S+ +L    L+ G S+P  +  IGEL EF D  +F QH  V+V DM AAL+F + G+ M VLRTR     N T VG+GPE L  P  FV GVSS   YGGHF++EL S    +  E+   F + PG  +QY+Q+A  N     +IKAGGII  GYGY  V+AP GL   + + D RDP  ++A+KVKD+KKS+ +Y  V GM K  Y + R   S FEP+QPK SV M Y  ++  +LL+PA R +T+  G VF+   +     ED+GK
Sbjct:    1 GGCDRRQWITSSSAILGSVALSQGLSQPGWS--IGELPEFSDDAKFIQHMVVRVEDMDAALEFCLKGLQMSVLRTRLVDGINGTFVGYGPEQLSPPEDFVPGVSSFARYGGHFSLELVSPTTPL--EQRKPFANNPGTALQYIQLAAPNLSFGKLIKAGGIITGGYGYADVIAPFGLPFRVFVADTRDPAQYIAMKVKDMKKSIAYYEKVLGMKKLSYEMLRVKDSSFEPIQPKGSVVMGYNENSCNILLIPATRQDTIEVGNVFAKLAIVTNGVEDIGK 276          
BLAST of mRNA_S-dermatodea_contig1091.611.1 vs. uniprot
Match: A0A0G4EHT2_VITBC (VOC domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EHT2_VITBC)

HSP 1 Score: 187 bits (476), Expect = 1.050e-50
Identity = 119/303 (39.27%), Postives = 165/303 (54.46%), Query Frame = 3
Query:  405 IGELVEFRDQERFAQHATVQVPDMAAALKFYVDGVGMKVLRTRAGPQF--NTTVVGFGPEAL---QVPPSFVFGVSSMRNYGGHFTVELNSQE---EVVGGEE----IGLFFDPGNGVQYLQMAVDNYRISTIIKAGGIIEYGYGYLLVLAPGGLRLAILMGDRRDPPMFVAVKVKDLKKSVQWYTDVAGMSKFPYPLARA-PGSPFEPLQPKDSVFMAYEGDAFGVLLVPA----ARGETVNPGGVFSA-SFLAEDVGKIAEDVGGTVDADSAWGATRSVSVSDPDGYAVKFVEYSSWQKGL 1259
            +G L E ++ ER+ QHA V VP M  AL FY  G+GM+V+RTR  P    N T VG+GPE L   +V   F  G+SS   YG HFT+EL  +    E+   +E    +   ++PGNGVQ+LQ+A+   R+S + + GG I   YG++ V APGGL L I++G+RRDP MF    VKDL  +  +Y    GM + PY  AR  P SP EP QP++S +M Y  D FG+LLV      A+   +  G VF   + L+ +V +    +            T   +  D  GY +  VEY  ++K L
Sbjct:    1 MGTLPETQNLERYIQHAVVNVPKMDDALNFYTRGLGMRVIRTRTNPAKTNNVTFVGYGPETLDLKRVENGFRPGISSYNEYGAHFTLELIEKRVPPELKSDDEDAQPVVQAYEPGNGVQFLQIALPFLRVSQLAETGGNIRRAYGWIEVDAPGGLPLRIIIGERRDPFMFACFTVKDLSAAKSFYETRLGMRELPYQKARYNPDSPLEPKQPQESAYMGYSEDTFGLLLVQQDKKIAKKTPIEVGSVFDKLAILSRNVVEEGPSLNAGFTGPVPGIGTNVAAFKDAQGYGLVLVEYDDFEKEL 303          
BLAST of mRNA_S-dermatodea_contig1091.611.1 vs. uniprot
Match: A0A8J5XKT4_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XKT4_DIALT)

HSP 1 Score: 102 bits (253), Expect = 1.520e-19
Identity = 92/284 (32.39%), Postives = 133/284 (46.83%), Query Frame = 3
Query:  459 VQVPDMAAALKFYVDGVGMKVLRT-RAGPQ-FNTTVVGFGPEALQVPPSFVFGVSSMRNYGGHFTVELNSQEEVVGGEEIGLFFDP-----GNGVQYLQMAVDNYRISTIIKAGGIIEYGYGYLLVLAPGGLRLAILMGDRRDPPMFVAVKVKDLKKSVQWYTDVAGMSKFPYPLARAPGSPF---------------EPLQPK---DSVFMAY----EGDAFGVLLVPAARGETVNPGGVFSASFLAEDVGKI-AEDVGGTVDADSAWGATRSVSVSDPDGYA 1220
            V+VPD+AAA +F++DG+ M  LR+ R GP      VVG+G E L              + GG F++EL  Q          L  D         + Y+Q+ V N RIS ++++GG IE  YGY+ V +PGGL + ++   RRDP  FVA++V D++ +  +Y    GM + P P  R    P                + L PK    SV M      + D+ GVLLVP +   T  P G+  A    + V  + A DV           A R  +++D DG+A
Sbjct:  131 VRVPDLAAARRFWLDGLKMSELRSSRVGPDGAEGIVVGYGREGLD------------EDDGGKFSLEL-VQASARAPAPARLALDAPDAEAAGALLYVQLRVPNVRISGLVQSGGAIESAYGYVEVTSPGGLAVRVITAPRRDPVEFVALRVPDVEAAAAYYERAFGMRRIPSPPRRTERGPGVLGTGLFGREYEVQDDVLAPKVLYGSVLMVSACCGQADSAGVLLVPPSA--TTAPLGLRLAGGDGDPVLTVRAADVS----------AARKAALADADGFA 389          
BLAST of mRNA_S-dermatodea_contig1091.611.1 vs. uniprot
Match: A0A5B8MYG2_9CHLO (Putative glyoxalase n=3 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MYG2_9CHLO)

HSP 1 Score: 102 bits (253), Expect = 2.040e-19
Identity = 86/291 (29.55%), Postives = 133/291 (45.70%), Query Frame = 3
Query:  441 FAQHATVQVPDMAAALKFYVDGVGMKVLRTRAGPQFNTTVVGFGPEALQVPPSFVFGVSSMRNYGGHFTVELNSQEEVVGGEEIGLFFDPGNGVQYLQMAVDN-YRISTIIKAGGIIEYGYGYLLVLAPGGLRLAILMGDRRDPPMFVAVKVKDLKKSVQWYTDVAGMSKFPYPLARAPGSPFEPLQPKDSVFMAYEG--DAFGVLLVPAARGETVNPGGVFSASFLAEDVG-------------KIAEDVGGTVDADSAWGATRSVSVSDP-DGYAVKFVEYSSWQKGLP 1262
            F QHA ++V D+  ++KF+  G+GMKV RTR    F    V FGPE L                GG F +EL                   N  Q+ Q A+ N  R++ +  +GG I +G+GY  + AP G ++ + + +RRDP   V V V D+  + ++Y  V GM+       +  G  FEP + K SV M Y    +  G+LLVP +  +  +       + L +DV              K   +V GT       G T+ VS++ P +G  + FV+Y+ +++  P
Sbjct:  154 FLQHAVLEVKDLDKSVKFWTQGLGMKVNRTRGNQAF----VSFGPETLTAAD------------GGKFALELVENPSTT----------QDNSGQFFQFALSNSLRVNRVANSGGDITFGFGYFEITAPDGYKVVVYIENRRDPFDLVGVYVNDVDAAAKYYERVFGMAADRSYGDKEVGR-FEPARIKGSVLMTYGAADENTGILLVPKSSSKEASSVQSIKIAVLDKDVNERKEKLVAAGLTPKFTGEVPGT-------GGTK-VSLAVPREGVPLVFVDYNDFEREQP 409          
BLAST of mRNA_S-dermatodea_contig1091.611.1 vs. uniprot
Match: A0A835Z3V5_9STRA (Metal ion binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3V5_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 8.280e-12
Identity = 76/292 (26.03%), Postives = 132/292 (45.21%), Query Frame = 3
Query:  441 FAQHATVQVPDMAAALKFYVDGVGMKVLRTRAGPQFNTTVVGFGPEALQVPPSFVFGVSSMRNYGGHFTVELNSQEEVVGGEEIGLFFDPGNGVQYLQMAVDNYRISTIIKA----GGIIEYGY---GYLLVLAPGGLRLAILMGDRRDPPMFVAVKVKDLKKSVQWYTDVAGMSKFPYPLARAPGSPFEPLQPKDSVFMAYEGDAFGVLLV----PAARGE--------TVNPGGVFSASFLAEDVGKIAEDVGGTVDADSAWGATRSVSVSDPDGYAVKFVEYSSWQKGL 1259
            F QHA ++V D++A +KF+ +G+GMK++R R      T  + +G E L                GG+F +EL   ++ V        +  G+  +YL + + +  ++  I+A    G I+ + +    ++ + +P G+ + +  G RRDP   VA    D+K +  +Y D   M +    L +  G    PL   D   + Y+G    V+LV    P  +G+        T N  G+  A     + GK+ E VG     ++    T+     DP+ + V FV+Y  ++K L
Sbjct:   52 FIQHAVLKVNDLSANIKFWCEGLGMKLVRERTIDNVRTVFLAYGKETLS------------SGDGGYFALELTQAQKPV--------YGVGSSFKYLGLTLPDKPMTLGIRATDAGGEIVPHWFLEKDFVEIKSPDGVPVRVKSGARRDPVTVVAFGSNDVKATQAYYKDTLRMKEQRGGLLKLLG----PLA-GDGPVLGYDGSDVSVVLVKEDAPVTQGQIFDKIAILTKNTVGMADA-ISKTNYGKV-EFVG-----EAPGIGTKVADTIDPEFHDVVFVDYDDFEKEL 311          
BLAST of mRNA_S-dermatodea_contig1091.611.1 vs. uniprot
Match: A0A6H5K0L5_9PHAE (VOC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0L5_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 3.740e-11
Identity = 75/294 (25.51%), Postives = 123/294 (41.84%), Query Frame = 3
Query:  441 FAQHATVQVPDMAAALKFYVDGVGMKVLRTRAGPQFNTTVVGFGPEALQVPPSFVFGVSSMRNYGGHFTVELNSQEEVVGGEEIGLFFDPGNGVQYLQMAVDNYRISTIIK---AGG-IIEYGYG---YLLVLAPGGLRLAILMGDRRDPPMFVAVKVKDLKKSVQWYTDVAGMSKFPYPLARAPGSPFEPLQPKDSVFMAYEGDAFGVLLVPAARGETVNPGGVFSA-SFLAEDVGKIAEDVGGTVDADSAWG-----------ATRSVSVSDPDGYAVKFVEYSSWQKGLPP 1265
            F QHA  +VPDM   +KF+ +G+GMKV+R R         V +G E+LQ               GG+F++EL    +   G      +  G   QYL + + +   +   K   AGG ++ + +G   ++   +P G  + +  G RRDP   VA   +   K+  ++ +V GM +    L +  G    PL         Y+     V L P      +  GG F   + L +D   +A+ V  +  A +  G            T+  +  D +G  V FV+Y  ++  + P
Sbjct:  102 FVQHAVFKVPDMDEEVKFFTEGLGMKVVRQREVNGVRNVFVAYGDESLQTKD------------GGYFSLELVYDPKAPPG------YSTGGPFQYLGLTLSSTLATIAYKVDAAGGTVVPHWFGTKDFVEATSPSGTTVRVKEGKRRDPFSVVAFGTQFPDKATAYFHNVLGMKEQDAGLLKVLG----PLAGDALRLSGYDKAGVSVALNPVDS--KIFEGGTFGKLAVLTKDTKALADKVSASGGAKTGGGDVLFAGEVPGIGTKVANTIDFEGRGVVFVDYDDFEGEMKP 371          
BLAST of mRNA_S-dermatodea_contig1091.611.1 vs. uniprot
Match: A0A2K3MR83_TRIPR (Lactoylglutathione lyase (Fragment) n=3 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MR83_TRIPR)

HSP 1 Score: 58.5 bits (140), Expect = 1.380e-5
Identity = 56/217 (25.81%), Postives = 95/217 (43.78%), Query Frame = 3
Query:  330 FLRNSAVLLAGAGLAGPSRPDSANAIGELVEFRDQERFAQHATVQVPDMAAALKFYVDGVGMKVLRTRAGPQ--FNTTVVGFGPEALQVPPSFVFGVSSMRNYGGHFTVELNSQEEVVGGEEIGLFFDPGNGVQYLQMAVDNY-RISTIIKA-GGIIEYGYGYL--------LVLAPGGLRLAILMGDRRDPPMF-VAVKVKDLKKSVQWYTDVAGM 941
            FLRN +  +    +A  +   SA     L   +  +R   H   +V D+  ++KFY +G+GMKVLR R  P+  +    +G+GPE                    HF+VEL     +         +D G G  +  +A+D+  R+  I++A GG I    G +        ++  P G +  +L       P+  V ++V DL +S+++Y    G+
Sbjct:   15 FLRNDSRCM--RVMASRNMSQSATQENALDWVKQDKRRMLHVVYRVGDLDKSIKFYTEGLGMKVLRKRDRPEERYMNAFLGYGPE------------------DAHFSVELTYNYGIE-------TYDIGTGFGHFGIAMDDISRVVDIVRAKGGTITREPGPVNGGNSNIAVIEDPDGYKFELLERSPCPEPLCKVMLRVGDLDRSIKFYEKAVGL 204          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1091.611.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LU98_ECTSI3.350e-16565.06VOC domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YIX3_9STRA1.110e-7650.16VOC domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A4D9D405_9STRA3.110e-6347.83Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
A0A7S2UZ58_9STRA2.860e-6144.29Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A0G4EHT2_VITBC1.050e-5039.27VOC domain-containing protein n=1 Tax=Vitrella bra... [more]
A0A8J5XKT4_DIALT1.520e-1932.39Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A5B8MYG2_9CHLO2.040e-1929.55Putative glyoxalase n=3 Tax=Chloropicon primus Tax... [more]
A0A835Z3V5_9STRA8.280e-1226.03Metal ion binding protein n=1 Tax=Tribonema minus ... [more]
A0A6H5K0L5_9PHAE3.740e-1125.51VOC domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A2K3MR83_TRIPR1.380e-525.81Lactoylglutathione lyase (Fragment) n=3 Tax=Trifol... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1091contigS-dermatodea_contig1091:453..3227 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score491.5
Seed ortholog evalue3.8e-136
Seed eggNOG ortholog2880.D8LU98
EggNOG free text desc.methylglyoxal metabolic process
EggNOG OGsCOG0346@1,KOG2943@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons3
Model size1878
Cds size1227
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1091.611.1prot_S-dermatodea_contig1091.611.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig1091 1057..2492 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924180.1832576-UTR-S-dermatodea_contig1091:452..10561622924180.1832576-UTR-S-dermatodea_contig1091:452..1056Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1091 453..1056 -
1694079073.1478171-UTR-S-dermatodea_contig1091:452..10561694079073.1478171-UTR-S-dermatodea_contig1091:452..1056Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1091 453..1056 -
1622924180.2133152-UTR-S-dermatodea_contig1091:2492..24971622924180.2133152-UTR-S-dermatodea_contig1091:2492..2497Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1091 2493..2497 -
1694079073.1807256-UTR-S-dermatodea_contig1091:2492..24971694079073.1807256-UTR-S-dermatodea_contig1091:2492..2497Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1091 2493..2497 -
1622924180.2227437-UTR-S-dermatodea_contig1091:3185..32271622924180.2227437-UTR-S-dermatodea_contig1091:3185..3227Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1091 3186..3227 -
1694079073.1922276-UTR-S-dermatodea_contig1091:3185..32271694079073.1922276-UTR-S-dermatodea_contig1091:3185..3227Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1091 3186..3227 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924180.19336-CDS-S-dermatodea_contig1091:1056..21141622924180.19336-CDS-S-dermatodea_contig1091:1056..2114Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1091 1057..2114 -
1694079073.1586683-CDS-S-dermatodea_contig1091:1056..21141694079073.1586683-CDS-S-dermatodea_contig1091:1056..2114Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1091 1057..2114 -
1622924180.2021453-CDS-S-dermatodea_contig1091:2323..24921622924180.2021453-CDS-S-dermatodea_contig1091:2323..2492Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1091 2324..2492 -
1694079073.170562-CDS-S-dermatodea_contig1091:2323..24921694079073.170562-CDS-S-dermatodea_contig1091:2323..2492Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1091 2324..2492 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig1091.611.1

>prot_S-dermatodea_contig1091.611.1 ID=prot_S-dermatodea_contig1091.611.1|Name=mRNA_S-dermatodea_contig1091.611.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=409bp
MAAMRMAPLKPSQLLPDGWDKGVTFVPSRLRRPALRVSLLLLGTCGSVRR
AAAFGLGVRPAGSLQQHERASCSANRMRMSEDTTEFDGAVGRGPFLRNSA
VLLAGAGLAGPSRPDSANAIGELVEFRDQERFAQHATVQVPDMAAALKFY
VDGVGMKVLRTRAGPQFNTTVVGFGPEALQVPPSFVFGVSSMRNYGGHFT
VELNSQEEVVGGEEIGLFFDPGNGVQYLQMAVDNYRISTIIKAGGIIEYG
YGYLLVLAPGGLRLAILMGDRRDPPMFVAVKVKDLKKSVQWYTDVAGMSK
FPYPLARAPGSPFEPLQPKDSVFMAYEGDAFGVLLVPAARGETVNPGGVF
SASFLAEDVGKIAEDVGGTVDADSAWGATRSVSVSDPDGYAVKFVEYSSW
QKGLPPLL*
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mRNA from alignment at S-dermatodea_contig1091:453..3227-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig1091.611.1 ID=mRNA_S-dermatodea_contig1091.611.1|Name=mRNA_S-dermatodea_contig1091.611.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2775bp|location=Sequence derived from alignment at S-dermatodea_contig1091:453..3227- (Saccorhiza dermatodea SderLu1190fm monoicous)
CTGCGTGCTGCACCGCCCTGAGGAACAACGCTCCCAGACAAGGTGAAACG AGCCGTTCATTTACAGCCCTATTGGCCGCGTGTTGTGCTTGCACTACGAA TCCTTGATATTCGCTTGGACGGTACAGATACACGTGTGTGCATACATGCA AACGGACGCGATGCTCTCTCATGTCCCACTGCTGCTGTCAGGTATTATAC ACGTATTGTTTGTTACTGCTGCTTTGTCATCACGATTCTTGCTGACAGGG GCTTAGCCTCTACGTGCCGGCTGGCGCTTCAGTCGGTACAATAGCTCGCT GTGCGGTTGTGCAGGCTTGCGTGCGCTTCATTTTCTTGGAGGGGGTGGTG CGGTGATTCTGCAGGGGCAGGGGTTTTGGCGCTGCTGTGGTAATTTGCTT GGAATGCGACATCCTCACTGTTGGGAGAGGGGTCTTTTTCCAAAGTTCTG ACACTCTAGACTCTAAATGGCGAGCTCCCCGCCTCGAGTTTGAACCTGTT AATGCCATGTGTGTGTGGTGACCTGCACACGACGCCCGGTTTGTCCACAG ATAAATCATGCCCAGCGCTCCACCTCCCTTTGGCAAAGATGTAACATGTA TGGCCGACAGCCCTCTGCTTCCGATGCAACTAGTACGTGTGCATGCATAT GACAAGAGTATGGTGTGCACGGCTGATGTCTTGTTCACTCTGTCCGCCCG TCTTGTCGTCGAAAACACTCTCGGGTGAAGATTGCATGGCAGCGATGCGA ATGGCGCCTTTGAAACCTAGCCAGCTGCTTCCTGATGGGTGGGACAAGGG TGTCACATTCGTGCCATCGCGATTAAGGCGCCCGGCGCTACGCGTGTCGC TGCTCCTACTTGGCACGTGCGGGAGCGTCCGGCGCGCGGCTGCGTTTGGA TTAGGTGAGCGAGACTGAAAATTATTCACCACATGCGAATATTCAGGCTA CATGTCGAGTTGAGATCTGCCTGAAAGCGAATATACATGGGTGACATTCG CCGCATAATATTGTATGATGCACAAGTTCTTGACCCATTTTTCTGGGAGA GGAGCTTGCACCGAGTGCGACAGCCGCTGTGACGCTTTCGTTTGCATGTT TTTGCCATTCCAGGAGTTCGGCCCGCCGGCTCGCTGCAGCAGCACGAGCG AGCCTCATGTTCGGCGAATCGGATGCGCATGTCTGAGGACACTACTGAAT TCGACGGAGCCGTTGGCAGAGGACCCTTCCTGCGCAACTCCGCCGTTCTC CTCGCCGGTGCCGGCCTGGCGGGACCGAGCCGCCCGGATTCCGCGAACGC CATCGGAGAGCTGGTCGAATTTAGGGACCAAGAGCGGTTCGCTCAGCACG CCACGGTACAGGTGCCGGATATGGCCGCCGCGCTCAAGTTTTACGTCGAT GGCGTCGGCATGAAGGTTCTACGTACGCGCGCGGGGCCTCAGTTCAACAC CACCGTCGTTGGCTTCGGACCCGAAGCCCTTCAGGTGCCGCCATCCTTCG TGTTCGGCGTGAGTTCTATGCGCAACTACGGCGGGCACTTCACCGTGGAG CTCAACTCGCAGGAGGAAGTCGTGGGCGGGGAGGAGATCGGTTTGTTCTT CGACCCGGGCAACGGCGTGCAGTATCTGCAGATGGCCGTGGACAACTACC GTATTTCTACGATAATCAAGGCTGGTGGAATCATCGAGTATGGCTACGGG TACCTCCTGGTGTTGGCGCCGGGAGGCTTGCGCCTGGCTATTCTTATGGG AGACCGAAGAGACCCGCCGATGTTCGTCGCCGTTAAGGTGAAGGACCTCA AGAAGTCCGTACAGTGGTACACGGACGTGGCCGGCATGTCGAAGTTTCCG TACCCGTTAGCTCGGGCGCCCGGCTCGCCTTTCGAGCCGCTACAGCCCAA GGACAGCGTTTTCATGGCCTACGAGGGAGATGCGTTCGGCGTGTTGCTCG TGCCCGCCGCCCGCGGCGAGACCGTGAACCCAGGGGGGGTGTTTTCGGCC TCGTTCCTGGCAGAAGACGTGGGGAAGATCGCGGAGGATGTCGGAGGGAC GGTTGACGCTGATAGCGCTTGGGGAGCAACACGGTCTGTTTCGGTCTCTG ATCCCGACGGCTACGCGGTGAAGTTCGTCGAGTACAGCTCCTGGCAGAAG GGACTCCCCCCGCTCTTGTAGTTACCAAATAGTACCCGGTATCACATAAT ATTTTTAGCTAGATCCTCAGCGATTACGTTAGCTACTTCAGGGTGGGGAG TCACGGCGTGTGGCGGTGGGACTTGGAGTTTTGGTATACAGCGCTTCGGG GGAAGACGCGGCAGCGGAACGAGTTAGTTGCAAGATCCCCGGATGGCGAC GTCTATCGGACGGGGTAGCGAATTCTGCGGTCATTCTTCCGTGTGTGCAA TAGTCGTCACAGAGACAGCACGGTACGGTGGTGGGAGGGCGAGTTGGCTA TATTTAAGACATGGGTATAGACCAGGATTAGATCCACACGTGACTTACTG GGCCTCATGGACTGGGCCTTACCTGGTATGTGTTTTTGACGAATAGAAAA CTATTTACACGCGCCACGTCTTTTTCTTTCTCCAAAGCGCGGACAATTTT GCCCCTAGACGAGTCTACCACGCCGTTTGAGGGGGTGTGCATTTTACCCT GTAGGCATGGAACGACTTCGGAAACAAGCAACGGAATGCAGCTGTTTCCA CGCAGTAGACAACGCGCACGATAGTACACGTGTGCGCACATATATAGAGC GATTCGAGAGTTCGGTTTGCCCGGG
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Coding sequence (CDS) from alignment at S-dermatodea_contig1091:453..3227-

>mRNA_S-dermatodea_contig1091.611.1 ID=mRNA_S-dermatodea_contig1091.611.1|Name=mRNA_S-dermatodea_contig1091.611.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2454bp|location=Sequence derived from alignment at S-dermatodea_contig1091:453..3227- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGCAGCGATGCGAATGGCGCCTTTGAAACCTAGCCAGCTGCTTCCTGA
TGGGTGGGACAAGGGTGTCACATTCGTGCCATCGCGATTAAGGCGCCCGG
CGCTACGCGTGTCGCTGCTCCTACTTGGCACGTGCGGGAGCGTCCGGCGC
GCGGCTGCGTTTGGATTAGATGGCAGCGATGCGAATGGCGCCTTTGAAAC
CTAGCCAGCTGCTTCCTGATGGGTGGGACAAGGGTGTCACATTCGTGCCA
TCGCGATTAAGGCGCCCGGCGCTACGCGTGTCGCTGCTCCTACTTGGCAC
GTGCGGGAGCGTCCGGCGCGCGGCTGCGTTTGGATTAGGAGTTCGGCCCG
CCGGCTCGCTGCAGCAGCACGAGCGAGCCTCATGTTCGGCGAATCGGATG
CGCATGTCTGAGGACACTACTGAATTCGACGGAGCCGTTGGCAGAGGACC
CTTCCTGCGCAACTCCGCCGTTCTCCTCGCCGGTGCCGGCCTGGCGGGAC
CGAGCCGCCCGGATTCCGCGAACGCCATCGGAGAGCTGGTCGAATTTAGG
GACCAAGAGCGGTTCGCTCAGCACGCCACGGTACAGGTGCCGGATATGGC
CGCCGCGCTCAAGTTTTACGTCGATGGCGTCGGCATGAAGGTTCTACGTA
CGCGCGCGGGGCCTCAGTTCAACACCACCGTCGTTGGCTTCGGACCCGAA
GCCCTTCAGGTGCCGCCATCCTTCGTGTTCGGCGTGAGTTCTATGCGCAA
CTACGGCGGGCACTTCACCGTGGAGCTCAACTCGCAGGAGGAAGTCGTGG
GCGGGGAGGAGATCGGTTTGTTCTTCGACCCGGGCAACGGCGTGCAGTAT
CTGCAGATGGCCGTGGACAACTACCGTATTTCTACGATAATCAAGGCTGG
TGGAATCATCGAGTATGGCTACGGGTACCTCCTGGTGTTGGCGCCGGGAG
GCTTGCGCCTGGCTATTCTTATGGGAGACCGAAGAGACCCGCCGATGTTC
GTCGCCGTTAAGGTGAAGGACCTCAAGAAGTCCGTACAGTGGTACACGGA
CGTGGCCGGCATGTCGAAGTTTCCGTACCCGTTAGCTCGGGCGCCCGGCT
CGCCTTTCGAGCCGCTACAGCCCAAGGACAGCGTTTTCATGGCCTACGAG
GGAGATGCGTTCGGCGTGTTGCTCGTGCCCGCCGCCCGCGGCGAGACCGT
GAACCCAGGGGGGGTGTTTTCGGCCTCGTTCCTGGCAGAAGACGTGGGGA
AGATCGCGGAGGATGTCGGAGGGACGGTTGACGCTGATAGCGCTTGGGGA
GCAACACGGTCTGTTTCGGTCTCTGATCCCGACGGCTACGCGGTGAAGTT
CGTCGAGTACAGCTCCTGGCAGAAGGGACTCCCCCCGCTCTTGTAGGAGT
TCGGCCCGCCGGCTCGCTGCAGCAGCACGAGCGAGCCTCATGTTCGGCGA
ATCGGATGCGCATGTCTGAGGACACTACTGAATTCGACGGAGCCGTTGGC
AGAGGACCCTTCCTGCGCAACTCCGCCGTTCTCCTCGCCGGTGCCGGCCT
GGCGGGACCGAGCCGCCCGGATTCCGCGAACGCCATCGGAGAGCTGGTCG
AATTTAGGGACCAAGAGCGGTTCGCTCAGCACGCCACGGTACAGGTGCCG
GATATGGCCGCCGCGCTCAAGTTTTACGTCGATGGCGTCGGCATGAAGGT
TCTACGTACGCGCGCGGGGCCTCAGTTCAACACCACCGTCGTTGGCTTCG
GACCCGAAGCCCTTCAGGTGCCGCCATCCTTCGTGTTCGGCGTGAGTTCT
ATGCGCAACTACGGCGGGCACTTCACCGTGGAGCTCAACTCGCAGGAGGA
AGTCGTGGGCGGGGAGGAGATCGGTTTGTTCTTCGACCCGGGCAACGGCG
TGCAGTATCTGCAGATGGCCGTGGACAACTACCGTATTTCTACGATAATC
AAGGCTGGTGGAATCATCGAGTATGGCTACGGGTACCTCCTGGTGTTGGC
GCCGGGAGGCTTGCGCCTGGCTATTCTTATGGGAGACCGAAGAGACCCGC
CGATGTTCGTCGCCGTTAAGGTGAAGGACCTCAAGAAGTCCGTACAGTGG
TACACGGACGTGGCCGGCATGTCGAAGTTTCCGTACCCGTTAGCTCGGGC
GCCCGGCTCGCCTTTCGAGCCGCTACAGCCCAAGGACAGCGTTTTCATGG
CCTACGAGGGAGATGCGTTCGGCGTGTTGCTCGTGCCCGCCGCCCGCGGC
GAGACCGTGAACCCAGGGGGGGTGTTTTCGGCCTCGTTCCTGGCAGAAGA
CGTGGGGAAGATCGCGGAGGATGTCGGAGGGACGGTTGACGCTGATAGCG
CTTGGGGAGCAACACGGTCTGTTTCGGTCTCTGATCCCGACGGCTACGCG
GTGAAGTTCGTCGAGTACAGCTCCTGGCAGAAGGGACTCCCCCCGCTCTT
GTAG
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