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Homology
BLAST of mRNA_S-dermatodea_contig10905.607.1 vs. uniprot
Match: D7FYJ6_ECTSI (Non-specific serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYJ6_ECTSI) HSP 1 Score: 67.8 bits (164), Expect = 2.750e-11 Identity = 33/40 (82.50%), Postives = 36/40 (90.00%), Query Frame = 1
Query: 49 MAVTIGFRTFLFRQVTVLIYAAGPRLPPRSVSQLVQVVHQ 168
MAV GFRTFLFRQV VLIYAAGPRLPP +VS+LVQ+VHQ
Sbjct: 1 MAVAGGFRTFLFRQVIVLIYAAGPRLPPWAVSRLVQIVHQ 40
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 67.8 |
| Seed ortholog evalue | 2.9e-09 |
| Seed eggNOG ortholog | 2880.D7FYJ6 |
| Preferred name | TOR1 |
| KEGG ko | ko:K07203 |
| KEGG Pathway | ko01521,ko01522,ko04012,ko04066,ko04072,ko04136,ko04138,ko04139,ko04140,ko04150,ko04151,ko04152,ko04211,ko04212,ko04213,ko04218,ko04371,ko04630,ko04659,ko04714,ko04910,ko04919,ko04920,ko04930,ko04931,ko05165,ko05167,ko05200,ko05205,ko05206,ko05210,ko05212,ko05214,ko05215,ko05221,ko05224,ko05225,ko05226,ko05230,ko05231,map01521,map01522,map04012,map04066,map04072,map04136,map04138,map04139,map04140,map04150,map04151,map04152,map04211,map04212,map04213,map04218,map04371,map04630,map04659,map04714,map04910,map04919,map04920,map04930,map04931,map05165,map05167,map05200,map05205,map05206,map05210,map05212,map05214,map05215,map05221,map05224,map05225,map05226,map05230,map05231 |
| EggNOG free text desc. | phosphatidylinositol kinase activity |
| EggNOG OGs | COG5032@1,KOG0891@2759 |
| EC | 2.7.11.1 |
| COG Functional cat. | BDLTU |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko01001,ko04131 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 262 |
| Cds size | 261 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10905.607.1 >prot_S-dermatodea_contig10905.607.1 ID=prot_S-dermatodea_contig10905.607.1|Name=mRNA_S-dermatodea_contig10905.607.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=87bp
LPQLLSELVKAIGRDDMAVTIGFRTFLFRQVTVLIYAAGPRLPPRSVSQL
VQVVHQCWESHLGQCIQVARALHGALGARGFRLLLPD back to topmRNA from alignment at S-dermatodea_contig10905:748..3035+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig10905.607.1 ID=mRNA_S-dermatodea_contig10905.607.1|Name=mRNA_S-dermatodea_contig10905.607.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2288bp|location=Sequence derived from alignment at S-dermatodea_contig10905:748..3035+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CTGCCGCAGCTTCTGTCCGAGCTTGTGAAGGCGATCGGGAGGGATGATAT
GGCGGTCACGATCGGCTTCCGAACTTTCTTGTTCCGTCAGGTGTGTGGTT
CGGTGCGGCGCGGTGCTATTTTAGTTATACTCCTGTACTTGACCCGAAAC
GCTTTCCGGAGGGACGGCCTCGGCGTATCAGATGGCGCGCAGCGCGGAAT
CTCTGTCGGATGTGTCCGTTAAGCGTCATTGTCGGGGGCGCCGTCGCGCG
TACGGACTGCAACGACTGTGTTGCTCTCTTTTTGCGTGGGACGTGACTTT
TTGCCTATCGAGCATTGGCGTTGTGTTGAGCGTATGCACACCGATGCTTT
GTCGAATTTCCACACACCCCACCTTTTGTTTCACTCTGGCCAGGTACTCT
TGTCAGTTGCCCTAGAGTTGCAACGTGGGACGTTTGGTTGCCCGTGCCCC
GTTGCCCGTTTTGGTACTTAAGTAAGCTTTTCGAGACCAGCTGCGGGCAC
CGTGTTTCACACCGAACAGCAACCCAACCGCGGCTATTTTTTCGCCGTTG
CGGTGGTTGAAAGCGGCGCCCTGCCACGGTTAACTCGCATGCGAGACGGT
GCACTTCTGTGCATACCCGTCGCCGCACTATATTGCAACATCCGGAGTGA
CGAGTGTTGACGATAATCGGACTCTTTTCCCAAAAGGGTTGACGCTAGCG
TTCCTCGTCGGCCTTGGCCGGTAGCTTGCAGGCGATGCCATGCCGAAGCA
GTACACGGGGTATACCGGACGGGGTTGCCGTACCGTTAGCAATGCTGGCC
GCAGCGTCGCGCTTCTCCTGACCCCCGCCTCGCTTTCTCTCCCCTCCTCG
ATTTGCCCATCCTTCGCTGTCCGGGTCGGAAAGGTGTCGCACCTGGTGTC
TTCTCGAGGCGAAACACACACCCGCCTATGTATTCCACACCGTAGCGATG
CCGACACCGTACCGTCGCCGCAGCCTTGCGCTTGTCTGACCCCCGCCTCT
CTCGCCTTGCCGTCCGCCCATTTTCCGCCAATCTATCACTGTCTGGTTTG
GAAGGTTACCGTGCTTATCTACGCGGCCGGGCCGCGCCTTCCCCCGCGCT
CCGTGTCGCAGCTGGTGCAAGTCGTCCATCAGGTGCGTGCCCCAGGGGCT
TCGGGGTTTGCGCTGCGCCAGCACTTGAGGGGACGAAGCGCCGCATGAGA
CCCTCGTATTATTGGGTTTCGAGCCCCTTGCAAGTTCTGTCTGGGGTGTG
TTGTAACGGCGCGTCGCCTGGCCCTGTGCATGTCGCGGGAAACGGGCTAT
GTACGCGTCCCTGTACCCGTGATTTTCCTGGGAGGATGAGGGTGTTTTTT
ATTCCCCCACGCCCGCGAGGTTGTCGTTCTCTGTCGCCTGCGGCGTTCCA
GGCCGCGAGTTGTTGCCGAAGGGGTGGGGAAAGAGGCCCGCCCAACGTGT
CCCTCGGAGCGAGCGTTGGAAAGGGCCGGAGTCGTAACTAAATAGACTGT
AGTGCGTCGCACGCAAGCGTTGAACCGCGTTGGGATTTGGTTACGAAGAA
CTCGAGCTAAAACGTGTGACGAATCGGAGACAAGATATCATGGATGTTGT
GGTTCGCATGCAGCTGAAGTTGAGATTGTTCCCGGGGCTGCTATTATACT
GGAATTTGCGAGCTCTCATTGGTTCCCCCGAACAAACGCGAGCGGTCCGC
ACCTGCGTACAAGGGCACGCGCCGAGTGATACGCCAGGGAGCAAGCGCGA
CTATGCCCAAATCAGAGGCTCTCTTGCTATCACACATGAGGGCGCTAGAG
ATCCTCGGCGGAGAGTGACTCCCACCCATGCGTTCGTCCCTGCACTTTTC
GGTTGCGATTCGTTCACACAGTCTTAAGAGTTGGCGCTGGTTGCGCGCGG
ATGTCAAATCCGTTTATTTTTTCGATTTGCTGAAAAAACAAAAGCGTCAA
GTATTGTACTGTTAGTATGAGGACGCGGGACGCGAAAGTTTGAGATGGTT
ACGGTTCCAAGCCACATCAGGATTTACGCGATTCTGATATAGGAGAGCAC
CAGTGACGTTTTCTACCCGAGCATACAACGCCCACCACTACTCCCCGCCT
CCAACACCACCCCCTCTTCTTTTGCTCCACCCATACTTACGTCTGCCGCC
GGTTTTCGCCTTTCTATTTTCGCGTGCGCTCTTTTGCCACGGAAGTGCTG
GGAGTCTCACCTCGGGCAATGCATCCAGGTGGCCCGAGCCCTCCACGGGG
CGCTCGGCGCGAGGGGATTCCGCCTGCTCCTCCCTGAC back to topCoding sequence (CDS) from alignment at S-dermatodea_contig10905:748..3035+ >mRNA_S-dermatodea_contig10905.607.1 ID=mRNA_S-dermatodea_contig10905.607.1|Name=mRNA_S-dermatodea_contig10905.607.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=522bp|location=Sequence derived from alignment at S-dermatodea_contig10905:748..3035+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CTGCCGCAGCTTCTGTCCGAGCTTGTGAAGGCGATCGGGAGGGATGATAT
GGCGGTCACGATCGGCTTCCGAACTTTCTTGTTCCGTCAGCTGCCGCAGC
TTCTGTCCGAGCTTGTGAAGGCGATCGGGAGGGATGATATGGCGGTCACG
ATCGGCTTCCGAACTTTCTTGTTCCGTCAGGTTACCGTGCTTATCTACGC
GGCCGGGCCGCGCCTTCCCCCGCGCTCCGTGTCGCAGCTGGTGCAAGTCG
TCCATCAGGTTACCGTGCTTATCTACGCGGCCGGGCCGCGCCTTCCCCCG
CGCTCCGTGTCGCAGCTGGTGCAAGTCGTCCATCAGTGCTGGGAGTCTCA
CCTCGGGCAATGCATCCAGGTGGCCCGAGCCCTCCACGGGGCGCTCGGCG
CGAGGGGATTCCGCCTGCTCCTCCCTGACTGCTGGGAGTCTCACCTCGGG
CAATGCATCCAGGTGGCCCGAGCCCTCCACGGGGCGCTCGGCGCGAGGGG
ATTCCGCCTGCTCCTCCCTGAC back to top
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