mRNA_S-dermatodea_contig10903.606.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10903.606.1 vs. uniprot
Match: D8LE28_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE28_ECTSI) HSP 1 Score: 181 bits (460), Expect = 6.220e-54 Identity = 89/115 (77.39%), Postives = 100/115 (86.96%), Query Frame = 1
Query: 1 GPDEGPDKYLHMAQLHEGREALEYFQKGLELLQKQLGDGHARA--KEEEAGLKQRLCMAYCSVGELYLTDLCFEEDAEKRCQDALDQSIAYDYGGPEPLHAVANLRLSQSKPEEA 339
GP+EGPDKYL+MAQLHEGREAL +++KGLELL+KQL DG KE EA L+QR CMAYCSV EL++TDLCFEEDAE RCQDALD SI YDYGGPEPL+AVANLRLSQS+PEEA
Sbjct: 103 GPEEGPDKYLYMAQLHEGREALGHYEKGLELLRKQLADGGGAGGTKEAEAALRQRACMAYCSVAELFMTDLCFEEDAETRCQDALDGSIRYDYGGPEPLNAVANLRLSQSRPEEA 217
BLAST of mRNA_S-dermatodea_contig10903.606.1 vs. uniprot
Match: A0A2D4BGB7_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BGB7_PYTIN) HSP 1 Score: 108 bits (269), Expect = 5.690e-26 Identity = 51/112 (45.54%), Postives = 79/112 (70.54%), Query Frame = 1
Query: 4 PDEGPDKYLHMAQLHEGREALEYFQKGLELLQKQLGDGHARAKEEEAGLKQRLCMAYCSVGELYLTDLCFEEDAEKRCQDALDQSIAYDYGGPEPLHAVANLRLSQSKPEEA 339
P + P K+L++AQL G +A++Y +G+ LQ++L G A +E +K+++C AYCS+GELY+TDLC E+DAE RC++ ++ +D G PEP A+ANLRL+Q + +EA
Sbjct: 79 PAQNPSKWLYLAQLVGGEDAVKYTTQGITYLQQEL-QGVAAESQEAQVIKKQICXAYCSLGELYMTDLCDEDDAEARCENYFQSALQFDIGTPEPTQALANLRLTQQRRDEA 189
BLAST of mRNA_S-dermatodea_contig10903.606.1 vs. uniprot
Match: A0A0P1AV38_PLAHL (Tetratricopeptide TPR1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AV38_PLAHL) HSP 1 Score: 104 bits (259), Expect = 1.490e-24 Identity = 49/112 (43.75%), Postives = 75/112 (66.96%), Query Frame = 1
Query: 4 PDEGPDKYLHMAQLHEGREALEYFQKGLELLQKQLGDGHARAKEEEAGLKQRLCMAYCSVGELYLTDLCFEEDAEKRCQDALDQSIAYDYGGPEPLHAVANLRLSQSKPEEA 339
P + P KY +++QL G+EA +Y +G+ LQ++L E +K+++C AYCS+GELY+TDLC++E+AE RC+ + ++++ YD G PEP A+ANLRL Q E A
Sbjct: 75 PSQNPTKYFYLSQLVVGKEAEQYMTQGITFLQQELQRQADPNSFEAMTIKKQICDAYCSLGELYMTDLCYDEEAEGRCEKSFEEAMKYDVGLPEPTQALANLRLVQQNKEGA 186
BLAST of mRNA_S-dermatodea_contig10903.606.1 vs. uniprot
Match: W7UA25_9STRA (Tpr domain protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UA25_9STRA) HSP 1 Score: 104 bits (259), Expect = 2.360e-24 Identity = 61/131 (46.56%), Postives = 80/131 (61.07%), Query Frame = 1
Query: 4 PDEGPDKYLHMAQLHEGREALEYFQKGLELLQKQLGDGHA--------RAKEEEAG----------LKQRLCMAYCSVGELYLTDLCFEEDAEKRCQDALDQSIAYDYGG-PEPLHAVANLRLSQSKPEEA 339
PD G K+L++ QL EG ++L++F KG ELLQ++LG R + EE G + +L +CS+ ELYLTDLCFEEDAE RCQ ALD+++ D GG PE A ANLRLSQ + +EA
Sbjct: 84 PDMGATKWLYLGQLSEGWKSLQHFSKGAELLQEELGARRINPCLKEPDRKEGEEVGGEGMNDEAFAIINQLVSTHCSIAELYLTDLCFEEDAEARCQAALDEALRLDVGGSPEVTQACANLRLSQKRGQEA 214
BLAST of mRNA_S-dermatodea_contig10903.606.1 vs. uniprot
Match: A0A484E7S1_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E7S1_BRELC) HSP 1 Score: 100 bits (250), Expect = 3.040e-23 Identity = 48/112 (42.86%), Postives = 73/112 (65.18%), Query Frame = 1
Query: 4 PDEGPDKYLHMAQLHEGREALEYFQKGLELLQKQLGDGHARAKEEEAGLKQRLCMAYCSVGELYLTDLCFEEDAEKRCQDALDQSIAYDYGGPEPLHAVANLRLSQSKPEEA 339
P + P KY ++AQL G EA +Y +G+ L+++L E +K+++C AYCS+GELY+TDLC ++AE RC+ ++++ +D G PEP A+ANLRL Q + EEA
Sbjct: 75 PSQNPAKYFYLAQLVTGTEAEQYTTQGIAFLEQELQQHAETHNPEVISIKKKICDAYCSLGELYMTDLCDHKEAESRCEMFFEKAMNFDIGLPEPTQALANLRLVQQRKEEA 186
BLAST of mRNA_S-dermatodea_contig10903.606.1 vs. uniprot
Match: F0W3H7_9STRA (Uncharacterized protein AlNc14C13G1540 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W3H7_9STRA) HSP 1 Score: 100 bits (248), Expect = 5.070e-23 Identity = 49/112 (43.75%), Postives = 78/112 (69.64%), Query Frame = 1
Query: 4 PDEGPDKYLHMAQLHEGREALEYFQKGLELLQKQLGDGHARAKEEEAGLKQRLCMAYCSVGELYLTDLCFEEDAEKRCQDALDQSIAYDYGGPEPLHAVANLRLSQSKPEEA 339
P + P K+L+ AQL G +A EY ++G+ L+++L +R EE K+++C AYC++GELY+TDLC EDAE++C++A ++ +D G PEP A+A+LRL+Q++ EA
Sbjct: 74 PADNPTKWLNAAQLVYGEKAREYTEQGIHFLKQELEAIESRV-EEVFATKKQICAAYCALGELYMTDLCDIEDAERKCEEAFKSAMQHDVGLPEPTQALASLRLTQTRTHEA 184
BLAST of mRNA_S-dermatodea_contig10903.606.1 vs. uniprot
Match: A0A024FZ81_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FZ81_9STRA) HSP 1 Score: 100 bits (248), Expect = 5.070e-23 Identity = 47/112 (41.96%), Postives = 78/112 (69.64%), Query Frame = 1
Query: 4 PDEGPDKYLHMAQLHEGREALEYFQKGLELLQKQLGDGHARAKEEEAGLKQRLCMAYCSVGELYLTDLCFEEDAEKRCQDALDQSIAYDYGGPEPLHAVANLRLSQSKPEEA 339
P + P K+L+ AQ+ G +A EY ++G+ L+++L ++ ++ K+++C AYC++GELY+TDLC EDAE++C++A ++ YD G PEP A+ANLRL+Q + +EA
Sbjct: 74 PADNPTKWLNAAQMVYGEKAQEYTEQGIHFLKQELEAINSNI-DDVFTTKKQICAAYCALGELYMTDLCDSEDAERKCEEAFKSALQYDVGLPEPTQALANLRLTQQRTQEA 184
BLAST of mRNA_S-dermatodea_contig10903.606.1 vs. uniprot
Match: A0A835ZAV8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAV8_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 9.270e-22 Identity = 54/120 (45.00%), Postives = 72/120 (60.00%), Query Frame = 1
Query: 4 PDEGPDKYLHMAQLHEGREALEYFQKGLELLQKQLGDGHARAKEEEAG--------LKQRLCMAYCSVGELYLTDLCFEEDAEKRCQDALDQSIAYDYGGPEPLHAVANLRLSQSKPEEA 339
PD K+L+MAQLHEG EAL+ + +GL LL+ L A L+Q+L A C+V ELY+TDLCF DAE C ALD+++ +D GGPE A+A+LRLSQ + +A
Sbjct: 103 PDASAGKWLYMAQLHEGEEALKLYNRGLTLLEAALAQPAAXXXXXXXXSTLTSIPELRQQLSAACCAVAELYMTDLCFAPDAEAACAAALDRALRHDAGGPEAHQAMAHLRLSQGRAADA 222
BLAST of mRNA_S-dermatodea_contig10903.606.1 vs. uniprot
Match: A0A0L0HJY3_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HJY3_SPIPD) HSP 1 Score: 97.1 bits (240), Expect = 1.150e-21 Identity = 48/112 (42.86%), Postives = 77/112 (68.75%), Query Frame = 1
Query: 4 PDEGPDKYLHMAQLHEGREALEYFQKGLELLQKQLGDGHARAKEEEAGLKQRLCMAYCSVGELYLTDLCFEEDAEKRCQDALDQSIAYDYGGPEPLHAVANLRLSQSKPEEA 339
P +G KYL++ QL EG+E+LE+++ G+E L+K L + A KEEEA +++RL A CS+ E+Y+TD C E +AE C+ ++I+YD PE +A++R+SQ +P++A
Sbjct: 94 PGQGYAKYLYLGQLSEGKESLEFYENGVEALEKALAEV-AGNKEEEAIIRRRLSEALCSMAEIYMTDCCDEPEAEASCETFSSKAISYDPTNPEAHQTLASVRMSQCRPDDA 204
BLAST of mRNA_S-dermatodea_contig10903.606.1 vs. uniprot
Match: A0A6A3UGW2_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UGW2_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 1.710e-21 Identity = 47/112 (41.96%), Postives = 70/112 (62.50%), Query Frame = 1
Query: 4 PDEGPDKYLHMAQLHEGREALEYFQKGLELLQKQLGDGHARAKEEEAGLKQRLCMAYCSVGELYLTDLCFEEDAEKRCQDALDQSIAYDYGGPEPLHAVANLRLSQSKPEEA 339
P + P KY +++QL G EA Y +G+ LQ++L + +K+++C A+CS+GELY+TDLC E+AE RC++ +S+ +D G PEP A+ANLRL Q E A
Sbjct: 75 PAQNPSKYFYLSQLVTGEEAERYTMQGITQLQQELQQHVDPSTPAALTIKKQICDAFCSLGELYMTDLCDHEEAESRCENYFQESMKFDVGLPEPTQALANLRLVQQNKEAA 186 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10903.606.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10903.606.1 >prot_S-dermatodea_contig10903.606.1 ID=prot_S-dermatodea_contig10903.606.1|Name=mRNA_S-dermatodea_contig10903.606.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=113bp GPDEGPDKYLHMAQLHEGREALEYFQKGLELLQKQLGDGHARAKEEEAGLback to top mRNA from alignment at S-dermatodea_contig10903:6278..7102- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10903.606.1 ID=mRNA_S-dermatodea_contig10903.606.1|Name=mRNA_S-dermatodea_contig10903.606.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=825bp|location=Sequence derived from alignment at S-dermatodea_contig10903:6278..7102- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10903:6278..7102- >mRNA_S-dermatodea_contig10903.606.1 ID=mRNA_S-dermatodea_contig10903.606.1|Name=mRNA_S-dermatodea_contig10903.606.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=678bp|location=Sequence derived from alignment at S-dermatodea_contig10903:6278..7102- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |