mRNA_S-dermatodea_contig10879.586.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10879.586.1 vs. uniprot
Match: A0A6H5JL82_9PHAE (L-type lectin-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL82_9PHAE) HSP 1 Score: 141 bits (356), Expect = 1.150e-38 Identity = 62/78 (79.49%), Postives = 71/78 (91.03%), Query Frame = 1
Query: 1 GAGMKELRVDLPSGDFHGFVETFKGLGVIVDTYRNEEFYQSHKDITVVYNTGNSTREEMIKASVGCNAQVRYYENRGE 234
G GMK+LR DLPSGDFHGFVETFKGLGVIVDTYRNEE+Y +HKD T+VYNTGN TR+EM++ASVGCN QVR+YENR +
Sbjct: 133 GGGMKDLRADLPSGDFHGFVETFKGLGVIVDTYRNEEYYNAHKDFTIVYNTGNMTRDEMVEASVGCNGQVRFYENRAD 210
BLAST of mRNA_S-dermatodea_contig10879.586.1 vs. uniprot
Match: D7FS50_ECTSI (L-type lectin-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS50_ECTSI) HSP 1 Score: 141 bits (356), Expect = 1.310e-38 Identity = 62/78 (79.49%), Postives = 71/78 (91.03%), Query Frame = 1
Query: 1 GAGMKELRVDLPSGDFHGFVETFKGLGVIVDTYRNEEFYQSHKDITVVYNTGNSTREEMIKASVGCNAQVRYYENRGE 234
G GMK+LR DLPSGDFHGFVETFKGLGVIVDTYRNEE+Y +HKD T+VYNTGN TR+EM++ASVGCN QVR+YENR +
Sbjct: 141 GGGMKDLRADLPSGDFHGFVETFKGLGVIVDTYRNEEYYNAHKDFTIVYNTGNMTRDEMVEASVGCNGQVRFYENRAD 218
BLAST of mRNA_S-dermatodea_contig10879.586.1 vs. uniprot
Match: A0A7S3K3R2_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K3R2_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 8.540e-17 Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 1
Query: 40 GDFHGFVETFKGLGVIVDTYRNEEFYQSHKDITVVYNTGNSTREEMIKASVGCNAQVRYYENRGE 234
GDFHGF E FKG+G+I+DT++N E HKDIT+V N G S E ++ SVGCN VRY+E R +
Sbjct: 115 GDFHGFSEKFKGIGIIIDTFKNAETLSYHKDITIVMNQGESEIETILANSVGCNGDVRYHEERAD 179
BLAST of mRNA_S-dermatodea_contig10879.586.1 vs. uniprot
Match: A0A7S2RYF1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYF1_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 3.840e-15 Identity = 33/65 (50.77%), Postives = 45/65 (69.23%), Query Frame = 1
Query: 40 GDFHGFVETFKGLGVIVDTYRNEEFYQSHKDITVVYNTGNSTREEMIKASVGCNAQVRYYENRGE 234
GDFHG VE F G GVI DT++N E H+D+++VYN G T E M++ GC+A +RY+E RG+
Sbjct: 154 GDFHGSVERFTGFGVIFDTFKNTETLSYHRDVSLVYNDGEKTTEVMLENKEGCDASIRYHEERGD 218
BLAST of mRNA_S-dermatodea_contig10879.586.1 vs. uniprot
Match: A0A7S2B8C4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B8C4_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 2.750e-12 Identity = 30/65 (46.15%), Postives = 43/65 (66.15%), Query Frame = 1
Query: 40 GDFHGFVETFKGLGVIVDTYRNEEFYQSHKDITVVYNTGNSTREEMIKASVGCNAQVRYYENRGE 234
GD HG VE F G GVI DT++N E H+D++V+ N G S+ E M+ GC+A +RY+E+R +
Sbjct: 137 GDLHGSVERFTGFGVIFDTFKNTESLSRHRDVSVIVNDGESSTELMMDKLEGCDASIRYHEDRAD 201
BLAST of mRNA_S-dermatodea_contig10879.586.1 vs. uniprot
Match: A0A3M6VKR2_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKR2_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 4.790e-11 Identity = 30/59 (50.85%), Postives = 41/59 (69.49%), Query Frame = 1
Query: 49 HGFVETFKGLGVIVDTYRNEEFYQSHKDITVVYNTGNSTREEMI-KASVGCNAQVRYYE 222
HGF E +KG+GV++DT+ NEE HKDI+V N G + ++M + VGCNA VRY+E
Sbjct: 121 HGFTEKYKGVGVVIDTFNNEEHKGGHKDISVFTNDGTKSYDQMYDEKRVGCNAAVRYHE 179
BLAST of mRNA_S-dermatodea_contig10879.586.1 vs. uniprot
Match: A0A835YN92_9STRA (Concanavalin A-like lectin/glucanase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN92_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 2.700e-9 Identity = 30/65 (46.15%), Postives = 42/65 (64.62%), Query Frame = 1
Query: 40 GDFHGFVETFKGLGVIVDTYRNEEFYQSHKDITVVYNTGNSTREEMIKASVGCNAQVRYYENRGE 234
GD G F G+G++VDT RNE + H+D++VV + G TRE++ VGCNA VRY+E R +
Sbjct: 170 GDVFGMDAAFTGIGIVVDTKRNEGDNR-HRDVSVVMSDGRRTREQIQSNLVGCNANVRYWEGRDD 233
BLAST of mRNA_S-dermatodea_contig10879.586.1 vs. uniprot
Match: M4BJT5_HYAAE (L-type lectin-like domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BJT5_HYAAE) HSP 1 Score: 60.5 bits (145), Expect = 6.810e-9 Identity = 30/63 (47.62%), Postives = 41/63 (65.08%), Query Frame = 1
Query: 40 GDFHGFVETFKGLGVIVDTYRNEEFYQSHKDITVVYNTGNSTREEMIKAS-VGCNAQ-VRYYE 222
GD HGF+ FKG+GV+ DT+ N+E HKD+T N G T +E+ +A VGC A +RY+E
Sbjct: 122 GDNHGFIGEFKGIGVVFDTFVNQEHNGGHKDVTFFENDGTKTLDELNEADKVGCMAPGIRYHE 184
BLAST of mRNA_S-dermatodea_contig10879.586.1 vs. uniprot
Match: A0A8J2WUK2_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WUK2_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 9.350e-9 Identity = 26/67 (38.81%), Postives = 44/67 (65.67%), Query Frame = 1
Query: 37 SGDFHGFVETFKGLGVIVDTYRNEEFYQSHKDITVVYNTGNST-REEMIKASVGCNAQVRYYENRGE 234
+G FHG F G+ V+ DT+RN+E +H+D+ +V + G + +++ + GC+A VRY+ENRG+
Sbjct: 112 AGAFHGADPRFAGVAVVADTFRNDEAAAAHRDLALVASGGGAADAAALLEGAAGCDASVRYHENRGD 178
BLAST of mRNA_S-dermatodea_contig10879.586.1 vs. uniprot
Match: A0A3R7JZA5_9STRA (L-type lectin-like domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JZA5_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 4.460e-8 Identity = 29/63 (46.03%), Postives = 40/63 (63.49%), Query Frame = 1
Query: 40 GDFHGFVETFKGLGVIVDTYRNEEFYQSHKDITVVYNTGNSTREEMIKAS-VGCNAQ-VRYYE 222
GD HGF+ FKGLG++ DT+ N+E HKD+T N G+ T +E+ VGC A +RY+E
Sbjct: 124 GDNHGFIGEFKGLGIVFDTFVNQEHGGGHKDVTFFENDGSKTLDELNDMEKVGCMAPGIRYHE 186 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10879.586.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10879.586.1 >prot_S-dermatodea_contig10879.586.1 ID=prot_S-dermatodea_contig10879.586.1|Name=mRNA_S-dermatodea_contig10879.586.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=75bp MKELRVDLPSGDFHGFVETFKGLGVIVDTYRNEEFYQSHKDITVVYNTGNback to top mRNA from alignment at S-dermatodea_contig10879:110..5442- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10879.586.1 ID=mRNA_S-dermatodea_contig10879.586.1|Name=mRNA_S-dermatodea_contig10879.586.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5333bp|location=Sequence derived from alignment at S-dermatodea_contig10879:110..5442- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10879:110..5442- >mRNA_S-dermatodea_contig10879.586.1 ID=mRNA_S-dermatodea_contig10879.586.1|Name=mRNA_S-dermatodea_contig10879.586.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=450bp|location=Sequence derived from alignment at S-dermatodea_contig10879:110..5442- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |