mRNA_S-dermatodea_contig10819.556.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig10819.556.1
Unique NamemRNA_S-dermatodea_contig10819.556.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig10819.556.1 vs. uniprot
Match: D8LTW2_ECTSI (Queuosine salvage protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTW2_ECTSI)

HSP 1 Score: 457 bits (1175), Expect = 1.750e-160
Identity = 220/249 (88.35%), Postives = 234/249 (93.98%), Query Frame = 1
Query:    1 DCLNFCFWPTPGLEYEHLAFGLKAAVQRDPQSLSADRLANATEDTIRGWFSGFDIPQISERAAKLRELGCVLQAHFGGEAALLVARAARSAARLVRLITCLLPGFRDEALHQGQQCFFYKRAQILAADLWAAYGRPPPGSGSPYAFEDVGDLTMFADYRVPQILAHLGVMEYDHDLDAKIGGKVQLQAGSEEEVEIRAACIQAVEGLRDALARRHVGVTSVEIDWRLWHEGERIKKDIRPHHRTLTCFY 747
            DCLNFCFWPTPGLEYEHLAFGLKAAVQRDP +LSADRLA ATE+TIRGWFSGF+IPQISERAAKLRELGCVLQAHFGGEAALLVARAARSAARLVRL+TCLLPGFRDE LHQG+QCFFYKRAQILAADLWAAYGRPPPGSGS YAFED+G+LTMFADYRVPQ+LAHLGV+EY   L+ KI G  +LQ GSEEEVEIRA C+QAVEGLR ALARR+V VTSVEIDWRLWHEGERIKKDI+PHHRTLTCFY
Sbjct:   89 DCLNFCFWPTPGLEYEHLAFGLKAAVQRDPLALSADRLAVATEETIRGWFSGFEIPQISERAAKLRELGCVLQAHFGGEAALLVARAARSAARLVRLLTCLLPGFRDETLHQGRQCFFYKRAQILAADLWAAYGRPPPGSGSLYAFEDIGELTMFADYRVPQVLAHLGVLEYSQALETKIDGLERLQPGSEEEVEIRAMCVQAVEGLRAALARRNVVVTSVEIDWRLWHEGERIKKDIQPHHRTLTCFY 337          
BLAST of mRNA_S-dermatodea_contig10819.556.1 vs. uniprot
Match: A0A836CCJ7_9STRA (Queuosine salvage protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCJ7_9STRA)

HSP 1 Score: 282 bits (721), Expect = 9.570e-92
Identity = 142/249 (57.03%), Postives = 175/249 (70.28%), Query Frame = 1
Query:    1 DCLNFCFWPTPGLEYEHLAFGLKAAVQRDPQSLSADRLANATEDTIRGWFSGFDIPQISERAAKLRELGCVLQAHFGGEAALLVARAARSAARLVRLITCLLPGFRDEALHQGQQCFFYKRAQILAADLWAAYGRPPPGSGSPYAFEDVGDLTMFADYRVPQILAHLGVMEYDHDLDAKIGGKVQLQAGSEEEVEIRAACIQAVEGLRDALARRHVGVTSVEIDWRLWHEGERIKKDIRPHHRTLTCFY 747
            D LNFCFWPTPGLEYEHLA GL  A++ DP++LSA  L+ AT   +  W  GF +PQ++ER +K+RELG VL AHFGG A+ +V  A  SA  L+RLIT LLPGFRDEA+++G Q F YKRAQI+ ADLWAAYG    G+   + F D+ +LTMFADYRVPQ+LAH G + Y   L  +I    +L AG EEEVEIRAA +QAVE + +A+      + SVE+DW LWH GE  K  I PHHRTL+ FY
Sbjct:   74 DALNFCFWPTPGLEYEHLASGLARALEADPRALSAAVLSAATPALLASWAPGFALPQMAERVSKVRELGAVLGAHFGGLASNMVQAAGGSAVNLIRLITALLPGFRDEAVYRGSQVFLYKRAQIVVADLWAAYGCR--GADQLFGFRDMAELTMFADYRVPQVLAHAGALVYAPALRQRIESLQELPAGGEEEVEIRAATVQAVERVAEAMKALGAPLLSVELDWLLWHRGEASKDTIAPHHRTLSIFY 320          
BLAST of mRNA_S-dermatodea_contig10819.556.1 vs. uniprot
Match: A0A7S0P787_CAFRO (Queuosine salvage protein n=4 Tax=Sar TaxID=2698737 RepID=A0A7S0P787_CAFRO)

HSP 1 Score: 265 bits (677), Expect = 1.190e-84
Identity = 137/250 (54.80%), Postives = 174/250 (69.60%), Query Frame = 1
Query:    1 DCLNFCFWPTP-GLEYEHLAFGLKAAVQRDPQSLSADRLANATEDTIRGWFSGFDIPQISERAAKLRELGCVLQAHFGGEAALLVARAARSAARLVRLITCLLPGFRDEALHQGQQCFFYKRAQILAADLWAAYGRPPPGSGSPYAFEDVGDLTMFADYRVPQILAHLGVMEYDHDLDAKIGGKVQLQAGSEEEVEIRAACIQAVEGLRDALARRHVGVTSVEIDWRLWHEGERIKKDIRPHHRTLTCFY 747
            D LN+CFWP+   +EY+ LA GL+ AV+ DP   SA+RL  AT   +RGW +  D+P+  ERA  LRELG VL A +GG+AA LV+   +SA RLV L+   LPGFRDE +++G++ F YKRAQILAAD+WAAYGR   G  SP+AF D+  LTMFADYRVPQ+L  +GV+ Y   L+A+I  + +L  GSEEEVEIRAA +QAVE LR A+      + SVE+DW LW  GER K+ + PHHRT T  Y
Sbjct:  107 DSLNWCFWPSATSMEYDALAVGLRKAVEADPSVFSAERLQGATAADVRGWLAPHDVPEAEERAEMLRELGHVLAAEYGGQAANLVSACGQSACRLVALLASRLPGFRDETVYRGRRVFLYKRAQILAADVWAAYGRLTSGP-SPFAFRDMASLTMFADYRVPQLLLPMGVLRYSPALEARIAAQEELCPGSEEEVEIRAASVQAVEKLRHAMGGT---LLSVELDWLLWQRGERSKEKLPPHHRTRTVCY 352          
BLAST of mRNA_S-dermatodea_contig10819.556.1 vs. uniprot
Match: A0A4D9CUX0_9STRA (Queuosine salvage protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUX0_9STRA)

HSP 1 Score: 265 bits (677), Expect = 2.870e-84
Identity = 145/292 (49.66%), Postives = 179/292 (61.30%), Query Frame = 1
Query:    1 DCLNFCFWPTPGLEYEHLAFGLKAAVQRDPQSLSADRLANATEDTIRGWF----------------------------------------SGFDIPQISERAAKLRELGCVLQAHFGGEAALLVARAARSAARLVRLITCLLPGFRDEALHQGQQCFFYKRAQILAADLWAAYG--RPPPGSGSPYAFEDVGDLTMFADYRVPQILAHLGVMEYDHDLDAKIGGKVQLQAGSEEEVEIRAACIQAVEGLRDALARRHVG-VTSVEIDWRLWHEGERIKKDIRPHHRTLTCFY 747
            D LNFCFWPTPGLEYEHLA GL+ A++RDP + +A  LA+ +  T+ GW                                         S F +P +SER  K+RE+G VL  HF G+AA LV  +  SA  LVRL++   P FRDEALHQG+Q +FYKRAQIL AD+WAAYG    PP    PYAF D+G+LTMFADYRVPQIL   GV+ Y   L  ++ G+ +L AGSEEEVEIRAA +QAVE +R+       G + SVE+DW LW EGER +  + PHHRTL+ FY
Sbjct:   94 DALNFCFWPTPGLEYEHLARGLRRALERDPTAFNAQALASVSPATVAGWVDCPSPPSPSHLSTSTPPTGPGPATGARGTSPPSSPASSPPSSF-LPCLSERVRKVREVGHVLLQHFNGQAADLVRASGFSAVELVRLLSAFFPSFRDEALHQGEQVYFYKRAQILVADIWAAYGCRTDPP---FPYAFRDMGELTMFADYRVPQILRGRGVLRYAPGLAERVDGREELPAGSEEEVEIRAATVQAVESMREVWRAGGKGEILSVELDWLLWQEGERYRDSLPPHHRTLSIFY 381          
BLAST of mRNA_S-dermatodea_contig10819.556.1 vs. uniprot
Match: A0A0M8K9E5_9CHLR (Uncharacterized protein n=2 Tax=Ardenticatenia TaxID=1382928 RepID=A0A0M8K9E5_9CHLR)

HSP 1 Score: 261 bits (666), Expect = 1.480e-83
Identity = 130/249 (52.21%), Postives = 166/249 (66.67%), Query Frame = 1
Query:    1 DCLNFCFWPTPGLEYEHLAFGLKAAVQRDPQSLSADRLANATEDTIRGWFSGFDIPQISERAAKLRELGCVLQAHFGGEAALLVARAARSAARLVRLITCLLPGFRDEALHQGQQCFFYKRAQILAADLWAAYGRPPPGSGSPYAFEDVGDLTMFADYRVPQILAHLGVMEYDHDLDAKIGGKVQLQAGSEEEVEIRAACIQAVEGLRDALARRHVGVTSVEIDWRLWHEGERIKKDIRPHHRTLTCFY 747
            D LNFCFWP PGLEYEHLA GLK A++ DP    A+RL     D +R W  G ++PQ+ ER   +RE+G  L AHFGG+AA LV+ A  SAARLV L+T   PGFRD A++ G+Q FFYKRAQI AAD+W A+     G      F+DV ++TMFADYRVPQ L   GV+ Y   L  K+  + ++  GS EE+EIRAA +QAVE LR  LA+R   V +V++DW LW   E +++ + PHHRTLT +Y
Sbjct:   68 DALNFCFWPKPGLEYEHLALGLKRAIEADPHVFDAERLVQVEADDLRRWV-GAELPQMEERVRLVREVGAGLLAHFGGQAANLVSAADHSAARLVSLLTAHFPGFRDHAVYDGRQVFFYKRAQIFAADVWGAFNGAGLGR-----FDDVHEMTMFADYRVPQYLRARGVLVYAPPLAEKVDARQEIAPGSPEEIEIRAATVQAVEHLRSLLAQRGYDVPAVQVDWLLWERAEAVRESLPPHHRTLTIYY 310          
BLAST of mRNA_S-dermatodea_contig10819.556.1 vs. uniprot
Match: A0A5D6YCF7_9STRA (Queuosine salvage protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YCF7_9STRA)

HSP 1 Score: 260 bits (665), Expect = 2.970e-83
Identity = 132/249 (53.01%), Postives = 165/249 (66.27%), Query Frame = 1
Query:    1 DCLNFCFWPTPGLEYEHLAFGLKAAVQRDPQSLSADRLANATEDTIRGWFSGFDIPQISERAAKLRELGCVLQAHFGGEAALLVARAARSAARLVRLITCLLPGFRDEALHQGQQCFFYKRAQILAADLWAAYGRPPPGSGSPYAFEDVGDLTMFADYRVPQILAHLGVMEYDHDLDAKIGGKVQLQAGSEEEVEIRAACIQAVEGLRDALARRHVGVTSVEIDWRLWHEGERIKKDIRPHHRTLTCFY 747
            D LNFCFWPT  +EYEHLA GLK A+ RDP +L A+RL + + +T+  WF  F  PQ+ ER  K++ELG VLQ  FGG+A  L+ARA  SA   VRL+   LPGFRD+A+++G+Q  FYKRAQIL  D+WAAYGR   G  S   F D+  LTMFADYRVPQ+L   GV+EY   L   +  K ++ +GSE EVEIRAA IQAVE +   +      +  VE+DW LW  GE  K  + PHHRTLT +Y
Sbjct:   76 DALNFCFWPTEHMEYEHLARGLKDALLRDPHALDAERLVSVSSETLMSWFCPFTPPQVDERKRKIQELGEVLQHGFGGQALNLIARAEGSAVEAVRLVLANLPGFRDQAVYRGEQVHFYKRAQILVGDVWAAYGRRSTGVAS---FHDIAQLTMFADYRVPQVLRPEGVLEYSEPLARLVDSKTEIPSGSEMEVEIRAATIQAVEQIHAQMEELGHSLKVVELDWLLWQIGEGRKDALLPHHRTLTVYY 321          
BLAST of mRNA_S-dermatodea_contig10819.556.1 vs. uniprot
Match: A0A0P1A8J2_PLAHL (Queuosine salvage protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A8J2_PLAHL)

HSP 1 Score: 259 bits (662), Expect = 8.170e-83
Identity = 129/249 (51.81%), Postives = 167/249 (67.07%), Query Frame = 1
Query:    1 DCLNFCFWPTPGLEYEHLAFGLKAAVQRDPQSLSADRLANATEDTIRGWFSGFDIPQISERAAKLRELGCVLQAHFGGEAALLVARAARSAARLVRLITCLLPGFRDEALHQGQQCFFYKRAQILAADLWAAYGRPPPGSGSPYAFEDVGDLTMFADYRVPQILAHLGVMEYDHDLDAKIGGKVQLQAGSEEEVEIRAACIQAVEGLRDALARRHVGVTSVEIDWRLWHEGERIKKDIRPHHRTLTCFY 747
            D LNFCFWPT  +EYEHLA GLKAA+ RDP +L A+ LAN T++T+  WFS +  PQ+ ER  K++E+G VL  HF G+A  L+  A  SA   +RL+     GF+D AL++G+Q  FYKRAQIL  D+WAAYGR   G  S   F D+G LTMFADYRVPQ+L    V+ Y  +L   + GKV++ +GSE EVEIRAA IQAVE +   L  +   +  +E+DW LW  GE+ KKD+ PHHRT + +Y
Sbjct:   75 DALNFCFWPTKDMEYEHLARGLKAALLRDPHALDAENLANVTKETVASWFSPYTPPQLDERQRKVQEVGVVLLKHFDGKALNLIKSARCSAVEAIRLVLAYFSGFQDHALYKGEQVHFYKRAQILVGDVWAAYGRRTSGITS---FHDIGKLTMFADYRVPQVLRSDCVIHYSPELAQIVDGKVEIPSGSEMEVEIRAATIQAVEQIHQQLISKGYCLHIIELDWLLWQIGEKNKKDLLPHHRTWSIYY 320          
BLAST of mRNA_S-dermatodea_contig10819.556.1 vs. uniprot
Match: A0A329RBU5_9STRA (Queuosine salvage protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RBU5_9STRA)

HSP 1 Score: 255 bits (652), Expect = 2.660e-81
Identity = 129/249 (51.81%), Postives = 161/249 (64.66%), Query Frame = 1
Query:    1 DCLNFCFWPTPGLEYEHLAFGLKAAVQRDPQSLSADRLANATEDTIRGWFSGFDIPQISERAAKLRELGCVLQAHFGGEAALLVARAARSAARLVRLITCLLPGFRDEALHQGQQCFFYKRAQILAADLWAAYGRPPPGSGSPYAFEDVGDLTMFADYRVPQILAHLGVMEYDHDLDAKIGGKVQLQAGSEEEVEIRAACIQAVEGLRDALARRHVGVTSVEIDWRLWHEGERIKKDIRPHHRTLTCFY 747
            D LNFCFWPT  +EYEHLA GLK A+ RDP  L AD LA  T +T+  WF  F  PQ+ ER  K+RE+G VLQ  F G+A  L+ +A  SA   +RL+    PGFRD AL++G+Q  FYKRAQIL  D+WAAYGR   G  S   F D+G LTMFADYRVPQ+L   GV+ Y   L   +  K ++ AGSE E+EIRAA IQAVE +   +  R   +  +E+DW LW  GE  K+D+ PHHRT + +Y
Sbjct:   75 DALNFCFWPTQYMEYEHLARGLKTALLRDPHVLDADNLAMVTNETVTSWFHPFTPPQLDERRRKVREVGEVLQKFFDGQALNLIKKANFSAVEAIRLVLAYFPGFRDHALYKGEQVHFYKRAQILVGDVWAAYGRRTSGIAS---FHDIGKLTMFADYRVPQVLRPEGVLVYSSKLAELVDNKAEIPAGSEMELEIRAATIQAVEQIHKQMINRGHHLEVIELDWLLWQIGEDNKEDLLPHHRTWSIYY 320          
BLAST of mRNA_S-dermatodea_contig10819.556.1 vs. uniprot
Match: H3G7J8_PHYRM (Queuosine salvage protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G7J8_PHYRM)

HSP 1 Score: 253 bits (645), Expect = 1.960e-80
Identity = 127/249 (51.00%), Postives = 162/249 (65.06%), Query Frame = 1
Query:    1 DCLNFCFWPTPGLEYEHLAFGLKAAVQRDPQSLSADRLANATEDTIRGWFSGFDIPQISERAAKLRELGCVLQAHFGGEAALLVARAARSAARLVRLITCLLPGFRDEALHQGQQCFFYKRAQILAADLWAAYGRPPPGSGSPYAFEDVGDLTMFADYRVPQILAHLGVMEYDHDLDAKIGGKVQLQAGSEEEVEIRAACIQAVEGLRDALARRHVGVTSVEIDWRLWHEGERIKKDIRPHHRTLTCFY 747
            D LNFCFWPT  +EYEHLA GLK A+  DP +L A+ LA  T +T+  WF  F  PQ+ ER  K+RE+G VLQ  F G A  L+ +A  SA   +RL+    PGFRD A+++G+Q  FYKRAQIL  D+WAAYGR   G  S   F D+  LTMFADYRVPQ+L   GVM Y  DL   +  K ++ AGSE E+EIRAA IQAVE + + +A +   +  +E+DW LW  GE  K+D+ PHHRT + +Y
Sbjct:   61 DALNFCFWPTENMEYEHLARGLKTALVNDPHALDAENLATVTNETVASWFHPFTPPQLDERRRKIREVGDVLQYFFDGRAMNLIKQANFSAVEAIRLVLANFPGFRDHAVYKGEQVHFYKRAQILVGDVWAAYGRRTSGIAS---FHDISKLTMFADYRVPQVLRPEGVMVYSADLAKLVDSKGEIPAGSEMELEIRAATIQAVEMIHNHMAHQGHHLQVIELDWLLWQIGEDNKEDLLPHHRTWSIYY 306          
BLAST of mRNA_S-dermatodea_contig10819.556.1 vs. uniprot
Match: A0A7S2UWC3_9STRA (Queuosine salvage protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWC3_9STRA)

HSP 1 Score: 253 bits (646), Expect = 1.140e-79
Identity = 126/249 (50.60%), Postives = 166/249 (66.67%), Query Frame = 1
Query:    1 DCLNFCFWPTPGLEYEHLAFGLKAAVQRDPQSLSADRLANATEDTIRGWFSGFDIPQISERAAKLRELGCVLQAHFGGEAALLVARAARSAARLVRLITCLLPGFRDEALHQGQQCFFYKRAQILAADLWAAYGRPPPGSGSPYAFEDVGDLTMFADYRVPQILAHLGVMEYDHDLDAKIGGKVQLQAGSEEEVEIRAACIQAVEGLRDALARRHVGVTSVEIDWRLWHEGERIKKDIRPHHRTLTCFY 747
            D LNFCFWPT GLEYEHLA  LK  +  DP + +A  L N  E  ++ W  G DIP I  R   LR+LG VL   + G A  +V  +  SA++LV+++   +P FRDE+++ G+Q FFYKRAQILAAD+W A+GR     G    F D+ ++TMFADYRVPQIL H GV++Y   L   I  + ++ AGS+ E+EIRAA IQAVE L+  L +  V +TSVEIDW LW EGE++K++I+ HH+T T FY
Sbjct:  129 DSLNFCFWPTKGLEYEHLAIALKNVLIGDPAAFNASNLVNIKESELQKWLPGVDIPLIHARVTALRQLGAVLLNSYDGLAIKMVEESNNSASKLVQMVVSSIPSFRDESVYNGEQVFFYKRAQILAADIWGAFGRQ--SKGHICGFSDMEEVTMFADYRVPQILEHRGVLKYSQRLCQMIVSEEEIPAGSDMEIEIRAATIQAVEMLQHILEKNDVKLTSVEIDWLLWQEGEKLKENIQKHHKTRTMFY 375          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10819.556.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTW2_ECTSI1.750e-16088.35Queuosine salvage protein n=2 Tax=Ectocarpus TaxID... [more]
A0A836CCJ7_9STRA9.570e-9257.03Queuosine salvage protein n=1 Tax=Tribonema minus ... [more]
A0A7S0P787_CAFRO1.190e-8454.80Queuosine salvage protein n=4 Tax=Sar TaxID=269873... [more]
A0A4D9CUX0_9STRA2.870e-8449.66Queuosine salvage protein n=1 Tax=Nannochloropsis ... [more]
A0A0M8K9E5_9CHLR1.480e-8352.21Uncharacterized protein n=2 Tax=Ardenticatenia Tax... [more]
A0A5D6YCF7_9STRA2.970e-8353.01Queuosine salvage protein n=1 Tax=Pythium brassicu... [more]
A0A0P1A8J2_PLAHL8.170e-8351.81Queuosine salvage protein n=1 Tax=Plasmopara halst... [more]
A0A329RBU5_9STRA2.660e-8151.81Queuosine salvage protein n=2 Tax=Phytophthora Tax... [more]
H3G7J8_PHYRM1.960e-8051.00Queuosine salvage protein n=1 Tax=Phytophthora ram... [more]
A0A7S2UWC3_9STRA1.140e-7950.60Queuosine salvage protein n=1 Tax=Fibrocapsa japon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10819contigS-dermatodea_contig10819:5857..6606 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score459.5
Seed ortholog evalue9.8e-127
Seed eggNOG ortholog2880.D8LTW2
Preferred nameC9orf64
GOsGO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008477,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016798,GO:0016799,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0101030,GO:1901360
EggNOG free text desc.Chromosome 9 open reading frame 64
EggNOG OGsKOG2524@1,KOG2524@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein of unknown function DUF2419
Ec32 orthologEc-12_004090.1
Exons1
Model size750
Cds size750
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924175.514067-CDS-S-dermatodea_contig10819:5856..66061622924175.514067-CDS-S-dermatodea_contig10819:5856..6606Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10819 5857..6606 -
1694079069.5971832-CDS-S-dermatodea_contig10819:5856..66061694079069.5971832-CDS-S-dermatodea_contig10819:5856..6606Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10819 5857..6606 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10819.556.1prot_S-dermatodea_contig10819.556.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig10819 5857..6606 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig10819.556.1

>prot_S-dermatodea_contig10819.556.1 ID=prot_S-dermatodea_contig10819.556.1|Name=mRNA_S-dermatodea_contig10819.556.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=250bp
DCLNFCFWPTPGLEYEHLAFGLKAAVQRDPQSLSADRLANATEDTIRGWF
SGFDIPQISERAAKLRELGCVLQAHFGGEAALLVARAARSAARLVRLITC
LLPGFRDEALHQGQQCFFYKRAQILAADLWAAYGRPPPGSGSPYAFEDVG
DLTMFADYRVPQILAHLGVMEYDHDLDAKIGGKVQLQAGSEEEVEIRAAC
IQAVEGLRDALARRHVGVTSVEIDWRLWHEGERIKKDIRPHHRTLTCFY*
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mRNA from alignment at S-dermatodea_contig10819:5857..6606-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig10819.556.1 ID=mRNA_S-dermatodea_contig10819.556.1|Name=mRNA_S-dermatodea_contig10819.556.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=750bp|location=Sequence derived from alignment at S-dermatodea_contig10819:5857..6606- (Saccorhiza dermatodea SderLu1190fm monoicous)
GACTGCCTGAACTTTTGTTTCTGGCCGACGCCCGGCCTCGAGTATGAGCA CCTAGCTTTCGGGCTCAAGGCGGCGGTGCAGCGGGACCCTCAGTCCCTCT CCGCCGACCGTCTCGCGAACGCCACGGAGGACACGATCCGGGGCTGGTTC TCGGGCTTCGACATCCCGCAGATCTCGGAGCGCGCGGCGAAGCTCCGAGA GCTGGGGTGCGTCCTACAAGCCCACTTCGGCGGCGAGGCGGCGCTTCTGG TGGCGCGCGCCGCGCGCTCGGCCGCGCGGCTGGTGCGGCTCATCACCTGC TTGCTGCCGGGCTTCCGCGACGAGGCGCTACACCAGGGGCAGCAGTGCTT CTTCTACAAGCGCGCGCAGATCCTCGCGGCGGACCTGTGGGCGGCGTACG GTAGGCCGCCTCCGGGGTCCGGGAGCCCGTACGCCTTCGAGGATGTGGGA GACCTCACCATGTTCGCGGACTACCGCGTGCCGCAGATCCTGGCGCACCT CGGCGTAATGGAGTACGACCACGATCTGGATGCCAAGATCGGAGGCAAGG TGCAGCTGCAGGCCGGTAGCGAGGAGGAGGTGGAGATCCGCGCGGCGTGC ATCCAGGCGGTCGAAGGCTTGCGTGACGCGCTGGCACGGCGTCACGTCGG CGTTACGAGCGTCGAGATCGACTGGCGGCTGTGGCACGAGGGGGAGCGCA TCAAGAAGGACATTCGACCACATCACCGAACGTTGACCTGCTTTTACTGA
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Coding sequence (CDS) from alignment at S-dermatodea_contig10819:5857..6606-

>mRNA_S-dermatodea_contig10819.556.1 ID=mRNA_S-dermatodea_contig10819.556.1|Name=mRNA_S-dermatodea_contig10819.556.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1500bp|location=Sequence derived from alignment at S-dermatodea_contig10819:5857..6606- (Saccorhiza dermatodea SderLu1190fm monoicous)
GACTGCCTGAACTTTTGTTTCTGGCCGACGCCCGGCCTCGAGTATGAGCA
CCTAGCTTTCGGGCTCAAGGCGGCGGTGCAGCGGGACCCTCAGTCCCTCT
CCGCCGACCGTCTCGCGAACGCCACGGAGGACACGATCCGGGGCTGGTTC
TCGGGCTTCGACATCCCGCAGATCTCGGAGCGCGCGGCGAAGCTCCGAGA
GCTGGGGTGCGTCCTACAAGCCCACTTCGGCGGCGAGGCGGCGCTTCTGG
TGGCGCGCGCCGCGCGCTCGGCCGCGCGGCTGGTGCGGCTCATCACCTGC
TTGCTGCCGGGCTTCCGCGACGAGGCGCTACACCAGGGGCAGCAGTGCTT
CTTCTACAAGCGCGCGCAGATCCTCGCGGCGGACCTGTGGGCGGCGTACG
GTAGGCCGCCTCCGGGGTCCGGGAGCCCGTACGCCTTCGAGGATGTGGGA
GACCTCACCATGTTCGCGGACTACCGCGTGCCGCAGATCCTGGCGCACCT
CGGCGTAATGGAGTACGACCACGATCTGGATGCCAAGATCGGAGGCAAGG
TGCAGCTGCAGGCCGGTAGCGAGGAGGAGGTGGAGATCCGCGCGGCGTGC
ATCCAGGCGGTCGAAGGCTTGCGTGACGCGCTGGCACGGCGTCACGTCGG
CGTTACGAGCGTCGAGATCGACTGGCGGCTGTGGCACGAGGGGGAGCGCA
TCAAGAAGGACATTCGACCACATCACCGAACGTTGACCTGCTTTTACTGA
GACTGCCTGAACTTTTGTTTCTGGCCGACGCCCGGCCTCGAGTATGAGCA
CCTAGCTTTCGGGCTCAAGGCGGCGGTGCAGCGGGACCCTCAGTCCCTCT
CCGCCGACCGTCTCGCGAACGCCACGGAGGACACGATCCGGGGCTGGTTC
TCGGGCTTCGACATCCCGCAGATCTCGGAGCGCGCGGCGAAGCTCCGAGA
GCTGGGGTGCGTCCTACAAGCCCACTTCGGCGGCGAGGCGGCGCTTCTGG
TGGCGCGCGCCGCGCGCTCGGCCGCGCGGCTGGTGCGGCTCATCACCTGC
TTGCTGCCGGGCTTCCGCGACGAGGCGCTACACCAGGGGCAGCAGTGCTT
CTTCTACAAGCGCGCGCAGATCCTCGCGGCGGACCTGTGGGCGGCGTACG
GTAGGCCGCCTCCGGGGTCCGGGAGCCCGTACGCCTTCGAGGATGTGGGA
GACCTCACCATGTTCGCGGACTACCGCGTGCCGCAGATCCTGGCGCACCT
CGGCGTAATGGAGTACGACCACGATCTGGATGCCAAGATCGGAGGCAAGG
TGCAGCTGCAGGCCGGTAGCGAGGAGGAGGTGGAGATCCGCGCGGCGTGC
ATCCAGGCGGTCGAAGGCTTGCGTGACGCGCTGGCACGGCGTCACGTCGG
CGTTACGAGCGTCGAGATCGACTGGCGGCTGTGGCACGAGGGGGAGCGCA
TCAAGAAGGACATTCGACCACATCACCGAACGTTGACCTGCTTTTACTGA
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