mRNA_S-dermatodea_contig10817.554.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10817.554.1 vs. uniprot
Match: A0A6H5JWW3_9PHAE (MULE domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW3_9PHAE) HSP 1 Score: 194 bits (492), Expect = 1.440e-54 Identity = 105/118 (88.98%), Postives = 109/118 (92.37%), Query Frame = 1
Query: 1 MVARVHSGVSRDDQVRPPTVVVGDTWQAIPENATIETTRLRVAQTGQSNQDRRLLYVEMLKKATAAVSSGVQFVPPETMRAIVQTFESSVNAAAMISSGQGAVLGNPQAVRQPAARSE 354
MVA VHS S+DDQVRPPTVVVGDTWQAIPE+ATIET RVAQTGQS QDRRLLYVEMLKKATAAVSSGVQ VPP+TMRAIVQTFESS+NAAAMISSGQGAVLGNPQAVRQPA RSE
Sbjct: 439 MVALVHSDASKDDQVRPPTVVVGDTWQAIPEDATIETRLQRVAQTGQSCQDRRLLYVEMLKKATAAVSSGVQLVPPDTMRAIVQTFESSMNAAAMISSGQGAVLGNPQAVRQPAVRSE 556
BLAST of mRNA_S-dermatodea_contig10817.554.1 vs. uniprot
Match: A0A6H5JU34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU34_9PHAE) HSP 1 Score: 129 bits (325), Expect = 4.440e-33 Identity = 68/90 (75.56%), Postives = 81/90 (90.00%), Query Frame = 1
Query: 148 QDRRLLYVEMLKKATAAVSSGVQFVPPETMRAIVQTFESSVNAAAMISSGQGAVLGNPQAVRQPAARSEGTREKSSVEFGGAKNRRRAQA 417
QDRRLLYV+M+K+ AAVS+GV+ VPP+T+RAIV+TFESS+NAAA ISSGQG VLGNPQAVRQPA RS+G R KSS+E+GGA+ RRRAQA
Sbjct: 334 QDRRLLYVDMVKRTNAAVSAGVELVPPDTLRAIVETFESSLNAAARISSGQGVVLGNPQAVRQPAKRSQGARAKSSLEYGGARARRRAQA 423
BLAST of mRNA_S-dermatodea_contig10817.554.1 vs. uniprot
Match: A0A6H5JBU5_9PHAE (SWIM-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBU5_9PHAE) HSP 1 Score: 100 bits (249), Expect = 5.330e-22 Identity = 51/64 (79.69%), Postives = 56/64 (87.50%), Query Frame = 1
Query: 1 MVARVHSGVSRDDQVRPPTVVVGDTWQAIPENATIETTRLRVAQTGQSNQDRRLLYVEMLKKAT 192
MVA V+S S+DDQVRPPT +VGDTWQAIPENATIET RVAQTGQS+QDRRLL+VEMLKK T
Sbjct: 431 MVALVNSDASKDDQVRPPTAMVGDTWQAIPENATIETRLQRVAQTGQSSQDRRLLFVEMLKKTT 494
BLAST of mRNA_S-dermatodea_contig10817.554.1 vs. uniprot
Match: A0A6H5JCK5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK5_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 4.060e-19 Identity = 50/107 (46.73%), Postives = 71/107 (66.36%), Query Frame = 1
Query: 67 GDTWQAIPENATIETTRLRVAQTGQSNQDRRLLYVEMLKKATAAVSSGVQFVPPETMRAIVQTFESSVNAAAMISSGQGAVLGNPQAVRQPAARSEGTREKSSVEFG 387
G W A N TIE++ +++ +TG + QDRR LYV+ LK+ATAAVS GV+ VPPE +RA+V+ F+ V+ A+ I S G + NP VR P +R G R+++S E G
Sbjct: 10 GVQWDA--GNVTIESSLVQLKETGPTPQDRRFLYVDCLKEATAAVSLGVETVPPEALRALVRQFKQGVHQASRIGSSAGLAVANPAVVRLPTSRDTGKRKRASHEGG 114
BLAST of mRNA_S-dermatodea_contig10817.554.1 vs. uniprot
Match: D7FLA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLA8_ECTSI) HSP 1 Score: 87.8 bits (216), Expect = 1.380e-17 Identity = 53/120 (44.17%), Postives = 74/120 (61.67%), Query Frame = 1
Query: 67 GDTWQAIPENATIETTRLRVAQTGQSNQDRRLLYVEMLKKATAAVSSGVQFVPPETMRAIVQTFESSVNAAAMISSGQGAVLGNPQAVRQPAARSEGTREKSSVEFGGAKNRRRAQANHT 426
G W A N TIE++ +++ +TG + QDRR LYV+ LK+ATAAVS GV+ VPPE +RA+VQ F+ V+ A+ I S G + NP VR P +R G R+++S + G R N T
Sbjct: 310 GVQWDA--GNVTIESSLVQLKETGPTPQDRRFLYVDCLKEATAAVSLGVETVPPEALRALVQQFKQGVHQASRIGSSAGLAVANPAVVRPPTSRDTGKRKRASRKGGAVVGAARRTYNQT 427
BLAST of mRNA_S-dermatodea_contig10817.554.1 vs. uniprot
Match: A0A6H5JJG6_9PHAE (SWIM-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJG6_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 5.030e-17 Identity = 50/107 (46.73%), Postives = 71/107 (66.36%), Query Frame = 1
Query: 67 GDTWQAIPENATIETTRLRVAQTGQSNQDRRLLYVEMLKKATAAVSSGVQFVPPETMRAIVQTFESSVNAAAMISSGQGAVLGNPQAVRQPAARSEGTREKSSVEFG 387
G W A N TIE++ +++ +TG + QDRR LYV+ LK+ATAAVS GV+ VPPE +RA+V+ F+ V+ A+ I S G + NP VR P +R G R+++S E G
Sbjct: 755 GVQWDA--GNVTIESSLVQLKETGPTPQDRRFLYVDCLKEATAAVSLGVETVPPEALRALVRQFKQGVHQASRIGSSAGLAVANPAVVRLPTSRDTGKRKRASHEGG 859
BLAST of mRNA_S-dermatodea_contig10817.554.1 vs. uniprot
Match: A0A6H5JMX3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMX3_9PHAE) HSP 1 Score: 82.0 bits (201), Expect = 2.310e-16 Identity = 50/108 (46.30%), Postives = 71/108 (65.74%), Query Frame = 1
Query: 67 GDTWQAIPENATIETTRLRVAQTGQSNQDRRLLYVEMLKKATAAVSSGVQFVPPETMRAIVQTFES-SVNAAAMISSGQGAVLGNPQAVRQPAARSEGTREKSSVEFG 387
G W A N TIE++ +++ +TG + QDRR LYV+ LK+ATAAVS GV+ VPPE +RA+V+ F+ V+ A+ I S G + NP VR P +R G R+++S E G
Sbjct: 109 GVQWDA--GNVTIESSLVQLKETGPTPQDRRFLYVDCLKEATAAVSLGVETVPPEALRALVRQFKQXGVHQASRIGSSAGLAVANPAVVRLPTSRDTGKRKRASHEGG 214 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10817.554.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10817.554.1 >prot_S-dermatodea_contig10817.554.1 ID=prot_S-dermatodea_contig10817.554.1|Name=mRNA_S-dermatodea_contig10817.554.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=143bp MVARVHSGVSRDDQVRPPTVVVGDTWQAIPENATIETTRLRVAQTGQSNQback to top mRNA from alignment at S-dermatodea_contig10817:1138..1566- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10817.554.1 ID=mRNA_S-dermatodea_contig10817.554.1|Name=mRNA_S-dermatodea_contig10817.554.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=429bp|location=Sequence derived from alignment at S-dermatodea_contig10817:1138..1566- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10817:1138..1566- >mRNA_S-dermatodea_contig10817.554.1 ID=mRNA_S-dermatodea_contig10817.554.1|Name=mRNA_S-dermatodea_contig10817.554.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=858bp|location=Sequence derived from alignment at S-dermatodea_contig10817:1138..1566- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |