mRNA_S-dermatodea_contig108.538.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig108.538.1 vs. uniprot
Match: A0A6H5L4R8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4R8_9PHAE) HSP 1 Score: 307 bits (786), Expect = 5.410e-102 Identity = 146/149 (97.99%), Postives = 149/149 (100.00%), Query Frame = 1
Query: 1 GMLTAMKQEVTRKHKAEKWALDDVVYHTEVTSYERMEQVRSPPSEGVYIHGLFLDGAAWSKQDGVMVESEPKKLFVSLPVLYVSANTKSDQVKVKREMFGAQGPFECPCYKYSARTDRYIIFMVNLKCTMEKNPQFWTLRGTALLCNTD 447
GMLTAMKQEVTRKHKAEKWALDDVVYHTEVTSYERMEQVRSPP+EGVYIHGLFLDGAAWSKQ+GVMVESEPKKLFVSLPVL+VSANTKSDQVKVKREMFGAQGPFECPCYKYSARTDRYIIFMVNLKCTMEKNPQFWTLRGTALLCNTD
Sbjct: 268 GMLTAMKQEVTRKHKAEKWALDDVVYHTEVTSYERMEQVRSPPAEGVYIHGLFLDGAAWSKQEGVMVESEPKKLFVSLPVLFVSANTKSDQVKVKREMFGAQGPFECPCYKYSARTDRYIIFMVNLKCTMEKNPQFWTLRGTALLCNTD 416
BLAST of mRNA_S-dermatodea_contig108.538.1 vs. uniprot
Match: D7FPL8_ECTSI (Dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPL8_ECTSI) HSP 1 Score: 307 bits (786), Expect = 5.330e-94 Identity = 146/149 (97.99%), Postives = 149/149 (100.00%), Query Frame = 1
Query: 1 GMLTAMKQEVTRKHKAEKWALDDVVYHTEVTSYERMEQVRSPPSEGVYIHGLFLDGAAWSKQDGVMVESEPKKLFVSLPVLYVSANTKSDQVKVKREMFGAQGPFECPCYKYSARTDRYIIFMVNLKCTMEKNPQFWTLRGTALLCNTD 447
GMLTAMKQEVTRKHKAEKWALDDVVYHTEVTSYERMEQVRSPP+EGVYIHGLFLDGAAWSKQ+GVMVESEPKKLFVSLPVL+VSANTKSDQVKVKREMFGAQGPFECPCYKYSARTDRYIIFMVNLKCTMEKNPQFWTLRGTALLCNTD
Sbjct: 4493 GMLTAMKQEVTRKHKAEKWALDDVVYHTEVTSYERMEQVRSPPAEGVYIHGLFLDGAAWSKQEGVMVESEPKKLFVSLPVLFVSANTKSDQVKVKREMFGAQGPFECPCYKYSARTDRYIIFMVNLKCTMEKNPQFWTLRGTALLCNTD 4641
BLAST of mRNA_S-dermatodea_contig108.538.1 vs. uniprot
Match: A0A7S0CDH8_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CDH8_9STRA) HSP 1 Score: 234 bits (596), Expect = 3.500e-73 Identity = 104/148 (70.27%), Postives = 125/148 (84.46%), Query Frame = 1
Query: 1 GMLTAMKQEVTRKHKAEKWALDDVVYHTEVTSYERMEQVRSPPSEGVYIHGLFLDGAAWSKQDGVMVESEPKKLFVSLPVLYVSANTKSDQVKVKREMFGAQGPFECPCYKYSARTDRYIIFMVNLKCTMEKNPQFWTLRGTALLCNT 444
G+LTAMKQEVTRKHKA+KWALDDVVYHTEV+++ER +QV+S P+EG+Y+HGLFLDG+AWSK DG +VES+PK LFV LP+L+V+ N K D+ K K+EMFG GP+ECP YKY+ RTDRY IF NLK T EK P FWT+RG ALLCNT
Sbjct: 279 GLLTAMKQEVTRKHKAQKWALDDVVYHTEVSNFERADQVKSAPAEGIYVHGLFLDGSAWSKSDGHLVESQPKVLFVPLPILFVTGNVKKDEDKAKKEMFGQLGPYECPVYKYATRTDRYFIFFANLKTTPEKPPNFWTMRGVALLCNT 426
BLAST of mRNA_S-dermatodea_contig108.538.1 vs. uniprot
Match: A0A7S4T437_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T437_9STRA) HSP 1 Score: 232 bits (591), Expect = 9.770e-73 Identity = 104/148 (70.27%), Postives = 126/148 (85.14%), Query Frame = 1
Query: 1 GMLTAMKQEVTRKHKAEKWALDDVVYHTEVTSYERMEQVRSPPSEGVYIHGLFLDGAAWSKQDGVMVESEPKKLFVSLPVLYVSANTKSDQVKVKREMFGAQGPFECPCYKYSARTDRYIIFMVNLKCTMEKNPQFWTLRGTALLCNT 444
G LTAMKQEVTRKHKAEKWALDDVVYHTEV +ER EQV++PP+EG+YIHGLFLDGAA+S+Q+G ++ES+PK LFVSLP+L+V+ N + D+ K K+E+FG+ GP+ECP YKY++RTDRY IF NLKCT EK P W LRG ALLCNT
Sbjct: 253 GCLTAMKQEVTRKHKAEKWALDDVVYHTEVMPFERAEQVKNPPTEGIYIHGLFLDGAAFSRQEGHLIESQPKTLFVSLPILFVTGNARKDEEKSKKELFGSIGPYECPVYKYASRTDRYFIFFANLKCTAEKYPNKWALRGVALLCNT 400
BLAST of mRNA_S-dermatodea_contig108.538.1 vs. uniprot
Match: W7TAL6_9STRA (Dynein heavy chain n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TAL6_9STRA) HSP 1 Score: 222 bits (565), Expect = 8.360e-71 Identity = 101/149 (67.79%), Postives = 127/149 (85.23%), Query Frame = 1
Query: 1 GMLTAMKQEVTRKHKAEKWALDDVVYHTEVTSYERMEQVRSPPSEGVYIHGLFLDGAAWSKQDGVMVESEPKKLFVSLPVLYVSANTKSDQVKVKREMFGAQGPFECPCYKYSARTDRYIIFMVNLKCTMEKNPQFWTLRGTALLCNTD 447
G+LTAMKQEVTR+HKA+KWALDDVVYHTEVTSYER EQ+RSPPSEG+Y++GL L+GA W+K +G +VESE KKLFV LPVL+V+ANTKS++ KV++++FG QGP+E PCYKY RTDR+++ MV LK ++ P W LRGTALLCN +
Sbjct: 97 GLLTAMKQEVTRRHKADKWALDDVVYHTEVTSYERPEQIRSPPSEGIYVYGLSLEGAGWNKIEGTLVESEAKKLFVPLPVLHVTANTKSEEFKVRKDIFGTQGPYEAPCYKYPCRTDRFMVMMVTLKGG-DRPPTHWALRGTALLCNIE 244
BLAST of mRNA_S-dermatodea_contig108.538.1 vs. uniprot
Match: A0A7S3V5M0_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V5M0_9STRA) HSP 1 Score: 235 bits (600), Expect = 1.080e-69 Identity = 105/148 (70.95%), Postives = 125/148 (84.46%), Query Frame = 1
Query: 1 GMLTAMKQEVTRKHKAEKWALDDVVYHTEVTSYERMEQVRSPPSEGVYIHGLFLDGAAWSKQDGVMVESEPKKLFVSLPVLYVSANTKSDQVKVKREMFGAQGPFECPCYKYSARTDRYIIFMVNLKCTMEKNPQFWTLRGTALLCNT 444
G LTAMKQEVTRKHK++KWALDDVVYHTEVT++ER+EQ+++PP+EG+YIHGLFLDGAAWS+Q G +VES+PK LFV PVLYV+ N K D+ + ++EMFG GP+ECP YKY +RTDRY IF NLKCT EK P WTLRG ALLCNT
Sbjct: 809 GCLTAMKQEVTRKHKSQKWALDDVVYHTEVTNFERVEQIKAPPAEGIYIHGLFLDGAAWSRQSGTLVESQPKLLFVPAPVLYVTGNAKKDEDRARKEMFGPIGPYECPVYKYPSRTDRYFIFYANLKCTPEKYPNKWTLRGVALLCNT 956
BLAST of mRNA_S-dermatodea_contig108.538.1 vs. uniprot
Match: A0A482S2S2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S2S2_9ARCH) HSP 1 Score: 235 bits (600), Expect = 2.410e-69 Identity = 107/151 (70.86%), Postives = 128/151 (84.77%), Query Frame = 1
Query: 1 GMLTAMKQEVTRKHK--AEKWALDDVVYHTEVTSYERMEQVRSPPSEGVYIHGLFLDGAAWSKQDGVMVESEPKKLFVSLPVLYVSANTKSDQVKVKREMFGAQGPFECPCYKYSARTDRYIIFMVNLKCTMEKNPQFWTLRGTALLCNTD 447
GMLTAMKQEV RKH+ A KWALDD++YHTEVT+Y+R+E V+SPPSEG YIHGLF++G AWSK+ ++VESEPK LFV LPVL VSAN KS+++K +R+++GAQGP+ECPCYKY RTDRY IFMV LKC+ EKNP FWTLR LLCNTD
Sbjct: 918 GMLTAMKQEVCRKHQKDANKWALDDIIYHTEVTNYDRIESVKSPPSEGCYIHGLFIEGCAWSKEHQMLVESEPKVLFVPLPVLMVSANLKSEEMKNRRDVYGAQGPYECPCYKYRTRTDRYFIFMVTLKCSPEKNPAFWTLRAVGLLCNTD 1068
BLAST of mRNA_S-dermatodea_contig108.538.1 vs. uniprot
Match: A0A835YLK0_9STRA (Dynein heavy chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLK0_9STRA) HSP 1 Score: 236 bits (601), Expect = 4.200e-69 Identity = 113/149 (75.84%), Postives = 125/149 (83.89%), Query Frame = 1
Query: 1 GMLTAMKQEVTRKHKAEKWALDDVVYHTEVTSYERMEQVRSPPSEGVYIHGLFLDGAAWSKQDGVMVESEPKKLFVSLPVLYVSANTKSDQVKVKREMFGAQGPFECPCYKYSARTDRYIIFMVNLKCT-MEKNPQFWTLRGTALLCNT 444
GMLTAMKQEVTRKHK +KWALDDVVYHTEVT++ER+EQVRS P EGVYIHGLF+DGAAWSKQ+G +VES PK LF SLPV+ VSANTK DQ KV R+MFG QGP+ CP YKY+ R+DRY IF NLK EK P FWTLRGTALLCNT
Sbjct: 4493 GMLTAMKQEVTRKHKGDKWALDDVVYHTEVTTHERVEQVRSSPQEGVYIHGLFIDGAAWSKQEGCLVESAPKVLFTSLPVMLVSANTKKDQEKVVRDMFGVQGPYLCPVYKYATRSDRYRIFYANLKVQGSEKGPNFWTLRGTALLCNT 4641
BLAST of mRNA_S-dermatodea_contig108.538.1 vs. uniprot
Match: A0A7S4NI87_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NI87_9STRA) HSP 1 Score: 222 bits (566), Expect = 7.390e-69 Identity = 98/148 (66.22%), Postives = 123/148 (83.11%), Query Frame = 1
Query: 1 GMLTAMKQEVTRKHKAEKWALDDVVYHTEVTSYERMEQVRSPPSEGVYIHGLFLDGAAWSKQDGVMVESEPKKLFVSLPVLYVSANTKSDQVKVKREMFGAQGPFECPCYKYSARTDRYIIFMVNLKCTMEKNPQFWTLRGTALLCNT 444
G LTAMKQEVTR+HKA KWALDDVVYHTEVT++ER++QV+SPP+EG+YIHGLFLDGAAWS+Q+G +VES+PK LFV LPVL+V+ N K ++ + ++E+FG+ GP+ECP YKY++R DRY +F NLKCT EK P W LRG L NT
Sbjct: 263 GCLTAMKQEVTRQHKANKWALDDVVYHTEVTNFERVDQVKSPPAEGIYIHGLFLDGAAWSRQEGHLVESQPKVLFVPLPVLFVTGNAKKEEDRSRKELFGSVGPYECPVYKYASRGDRYFVFFANLKCTAEKYPNHWALRGVCALMNT 410
BLAST of mRNA_S-dermatodea_contig108.538.1 vs. uniprot
Match: A0A2D5NKH1_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5NKH1_9BACT) HSP 1 Score: 230 bits (587), Expect = 4.840e-68 Identity = 104/149 (69.80%), Postives = 124/149 (83.22%), Query Frame = 1
Query: 1 GMLTAMKQEVTRKHKAEKWALDDVVYHTEVTSYERMEQVRSPPSEGVYIHGLFLDGAAWSKQDGVMVESEPKKLFVSLPVLYVSANTKSDQVKVKREMFGAQGPFECPCYKYSARTDRYIIFMVNLKCTMEKNPQFWTLRGTALLCNTD 447
GMLTAMKQEVTR H+ E WALD+V+YHTEVTS+ER+EQVRS P EG YIHGLFL+G A+ K G + ESEPKKLFV LPVL+V+AN + ++K ++EMFGAQGP+E PCYKY RTDR+ +F V LKCT +KNP+ WTLRGTALLCNTD
Sbjct: 761 GMLTAMKQEVTRNHRKENWALDNVIYHTEVTSFERVEQVRSKPDEGAYIHGLFLEGGAFDKNQGQLCESEPKKLFVPLPVLFVTANQEEPELKKRKEMFGAQGPYEAPCYKYPKRTDRFFVFYVTLKCTPDKNPRHWTLRGTALLCNTD 909 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig108.538.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig108.538.1 >prot_S-dermatodea_contig108.538.1 ID=prot_S-dermatodea_contig108.538.1|Name=mRNA_S-dermatodea_contig108.538.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=149bp MLTAMKQEVTRKHKAEKWALDDVVYHTEVTSYERMEQVRSPPSEGVYIHGback to top mRNA from alignment at S-dermatodea_contig108:16561..17868- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig108.538.1 ID=mRNA_S-dermatodea_contig108.538.1|Name=mRNA_S-dermatodea_contig108.538.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1308bp|location=Sequence derived from alignment at S-dermatodea_contig108:16561..17868- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig108:16561..17868- >mRNA_S-dermatodea_contig108.538.1 ID=mRNA_S-dermatodea_contig108.538.1|Name=mRNA_S-dermatodea_contig108.538.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=894bp|location=Sequence derived from alignment at S-dermatodea_contig108:16561..17868- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |