mRNA_S-dermatodea_contig10798.536.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
|
Overview
Homology
BLAST of mRNA_S-dermatodea_contig10798.536.1 vs. uniprot
Match: D8LMR7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMR7_ECTSI) HSP 1 Score: 267 bits (683), Expect = 1.910e-77 Identity = 212/425 (49.88%), Postives = 235/425 (55.29%), Query Frame = 3
Query: 234 VASFDIMALKAKAIQLVERLRQEKTARLKADREMHKVAGKVQVLSDHIEKLMLFLKHEATQKAKAHEQQRRLQKELDLVKARSTALTRGNQAKDRVTIELREGSKILEDQLRLMDEKYMELRTKLDWTRTKADKDVRRARAQASALRTKWALLCTAG-GGGENNLLDSINVD--PARQNRQSSSAPEVGTGGDYGHYGSSGKLANHSKQQQHQH-----------------------------------------HGVGQSRGGGSRGSPPIGSRGGLDSRVGRGGGTXXXXXXXXXXXGAMASSTSEPSLFARQHRXXXXXXXXXXXXXLGGAGREAADGQQR----PRTGAVGG----RSGLLQGGVTFNPGLSAGSDPGGG--GDMLAGVRGGSGGGQRPPWSEQGG-KVAGGRHAPQLLYA 1343
VA+ DIMALK KA QLVERLR EK+ARLKA+R+ KVAGKVQVLSDHIEKLM+FLKHEATQKAKAHEQQRRLQKEL+LVKARSTAL R NQAKDRVT ELREGSKILEDQLRLMDEKYMELRTKLDWTRTKADKDVRRARAQASALRTKWA+LC G GGG ++LLD++ VD P SSSAP GV P+ SRGG D +A STS+PSL Q L G G+ + P G GG R G GG++ GLSAG+DPGG GDM G G GGGQRPPWSEQGG + AG + ++LYA
Sbjct: 483 VATADIMALKVKATQLVERLRHEKSARLKAERKTQKVAGKVQVLSDHIEKLMMFLKHEATQKAKAHEQQRRLQKELELVKARSTALLRSNQAKDRVTTELREGSKILEDQLRLMDEKYMELRTKLDWTRTKADKDVRRARAQASALRTKWAILCGDGEGGGGSSLLDTMQVDVAPGPHLNHSSSAPGTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGV------------PL-SRGGQDP---------------------LAPSTSDPSLLRGQQTRPQRSGFGGGNSSLKMVGAGXXXGKFKNAAVPLPGYAGGGGAARGGSPPGGLSA--GLSAGTDPGGELLGDMGTGRGGTGGGGQRPPWSEQGGGRGAGDIASKKILYA 871
BLAST of mRNA_S-dermatodea_contig10798.536.1 vs. uniprot
Match: A0A835YJ85_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ85_9STRA) HSP 1 Score: 156 bits (394), Expect = 3.830e-40 Identity = 102/194 (52.58%), Postives = 128/194 (65.98%), Query Frame = 3
Query: 183 QRGGGGHSGVDGYDAEEVASFDIMALKAKAIQLVERLRQEKTARLKADREMHKVAGKVQVLSDHIEKLMLFLKHEATQKAKAHEQQRRLQKELDLVKARSTALTRGNQAKDRVTIELREGSKILEDQLRLMDEKYMELRTKLDWTRTKADKDVRRARAQASALRTKWALLCTAGGGG---ENNLLDSINVDPAR 755
+ GGGG +G+ + DI AL+++ +QLVE LRQEK RL+A E + AG V+ LS+H+EKLM +LKHEA KA+AHEQQ RLQKE++L++AR AL R AK R ELREGSKILEDQLRLMD KY+ELR KLD TR +A ++V A+ + LR KW L GG LLD VDPA+
Sbjct: 17 ENGGGGGTGL------AAITGDIAALRSRCLQLVEALRQEKGRRLRAVGEGERQAGHVRALSEHVEKLMAYLKHEAAAKARAHEQQLRLQKEVELLRARGAALERKAAAKSRAISELREGSKILEDQLRLMDAKYVELRGKLDRTRARAAREVGAAKRDCTRLRVKWTTLSREFGGCGGLRGALLDE--VDPAQ 202
BLAST of mRNA_S-dermatodea_contig10798.536.1 vs. uniprot
Match: A0A7S1UHS9_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHS9_9STRA) HSP 1 Score: 149 bits (376), Expect = 7.920e-36 Identity = 90/166 (54.22%), Postives = 116/166 (69.88%), Query Frame = 3
Query: 246 DIMALKAKAIQLVERLRQEKTARLKADREMHKVAGKVQVLSDHIEKLMLFLKHEATQKAKAHEQQRRLQKELDLVKARSTALTRGNQAKDRVTIELREGSKILEDQLRLMDEKYMELRTKLDWTRTKADKDVRRARAQASALRTKWALLCTAGGGGENNLLDSINV 743
D+ AL+ +A L R RQEK A+ +A+ + KV LSDHIEKLML LKHEA KAKA E QRR Q+E L++ R+ AL + N A++RV +E++EGSKILEDQLRLMDEKY+ELR KLDWTR KA ++V++ +A+AS LR ++ALL G LLD V
Sbjct: 293 DMKALRMRATHLASRHRQEKEAKYRAEDALRSSNKKVAALSDHIEKLMLHLKHEAASKAKAFELQRRAQRETTLLRKRNQALVKRNTARERVILEMQEGSKILEDQLRLMDEKYLELRVKLDWTRNKATQEVKKFKAEASNLRARFALLHPGEG-----LLDDARV 453
BLAST of mRNA_S-dermatodea_contig10798.536.1 vs. uniprot
Match: A0A8J2SP64_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SP64_9STRA) HSP 1 Score: 145 bits (367), Expect = 6.130e-35 Identity = 90/185 (48.65%), Postives = 116/185 (62.70%), Query Frame = 3
Query: 237 ASFDIMALKAKAIQLVERLRQEKTARLKADREMHKVAGKVQVLSDHIEKLMLFLKHEATQKAKAHEQQRRLQKELDLVKARSTALTRGNQAKDRVTIELREGSKILEDQLRLMDEKYMELRTKLDWTRTKADKDVRRARAQASALRTKWALLCTAGGGGENNLLDSINVD-PARQNRQSSSAPEV 788
A D+ ALK KA +L+ R + EK R KA+ E KV LSDH+EKLM+ LKHE KA+ +Q RR +K+LD K RS L R N A+++ +EL+EGSKILEDQL+LMD +Y+ELR KLDWTR A+ V+RA+ AS LR KWAL + G LLD + + P +QS PE
Sbjct: 317 AGDDVRALKHKATELLARGKAEKDQRQKAEAEAKLTGKKVAALSDHVEKLMVHLKHEVGAKAQVTDQLRRAEKDLDTAKLRSRTLARRNNAREKFVLELKEGSKILEDQLKLMDRRYLELRAKLDWTRQHAETQVKRAKKAASTLRAKWALATNSSQG----LLDEVQLPAPGTLTQQSHFPPET 497
BLAST of mRNA_S-dermatodea_contig10798.536.1 vs. uniprot
Match: A0A7S2RYH1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYH1_9STRA) HSP 1 Score: 138 bits (347), Expect = 1.540e-34 Identity = 90/178 (50.56%), Postives = 115/178 (64.61%), Query Frame = 3
Query: 276 QLVERLRQEKTARLKADREMHKVAGKVQVLSDHIEKLMLFLKHEATQKAKAHEQQRRLQKELDLVKARSTALTRGNQAKDRVTIELREGSKILEDQLRLMDEKYMELRTKLDWTRTKADKDVRRARAQASALRTKWALLCTAGGGGENNLLDSINVDPARQNRQSSSAPEVGTGGDYG 809
QL+ER + EK +RL+A+ K+ LS HIE+LML LKHEA KAKAHE R +E+ L++ R+ LT+ A+D+V +ELREG+KILEDQLRLMDEKYMELRTKLD+TR + K+V + + QAS LR KWALL A G LLD + V + G GGD+G
Sbjct: 1 QLLERQKAEKESRLRAEAATKLANKKILALSQHIERLMLHLKHEAASKAKAHEAAGRATQEVSLLRQRNGVLTKRAGARDQVIVELREGAKILEDQLRLMDEKYMELRTKLDYTRQASTKEVNKYKQQASHLRAKWALLSNAPGH-VPTLLDEMPVPMG----------DTGGGGDWG 167
BLAST of mRNA_S-dermatodea_contig10798.536.1 vs. uniprot
Match: A0A812Y6I0_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Y6I0_SYMMI) HSP 1 Score: 141 bits (355), Expect = 2.440e-34 Identity = 91/165 (55.15%), Postives = 112/165 (67.88%), Query Frame = 3
Query: 237 ASFDIMALKAKAIQLVERLRQEKTARLKADREMHKVAGKVQVLSDHIEKLMLFLKHEATQKAKAHEQQRRLQKELDLVKARSTALTRGNQAKDRVTIELREGSKILEDQLRLMDEKYMELRTKLDWTRTKADKDVRRARAQASALRTKWALLCTAGGGGENNLLD 731
A+ DI ALKAKAI LVER+RQEK +L+ + E + A K+++LSDH+EKLM+ LKHEA K KA +Q R +K V+ ++R AKDR+ ELREGSKILEDQLRLMDEKY+ELRTKLD+ R A K VR A+ AS LR K+AL G LLD
Sbjct: 201 AAEDIRALKAKAISLVERIRQEKEDKLRIEGEQKQYAKKIEMLSDHVEKLMIHLKHEAAAKIKAVDQLRASEKRNRAVQDNLDLVSRKAAAKDRLIAELREGSKILEDQLRLMDEKYLELRTKLDYAREMAAKKVRNAQKTASELRVKFALA------GNQKLLD 359
BLAST of mRNA_S-dermatodea_contig10798.536.1 vs. uniprot
Match: A0A7S2B9G0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B9G0_9STRA) HSP 1 Score: 138 bits (348), Expect = 5.240e-34 Identity = 88/169 (52.07%), Postives = 111/169 (65.68%), Query Frame = 3
Query: 237 ASFDIMALKAKAIQLVERLRQEKTARLKADREMHKVAGKVQVLSDHIEKLMLFLKHEATQKAKAHEQQRRLQKELDLVKARSTALTRGNQAKDRVTIELREGSKILEDQLRLMDEKYMELRTKLDWTRTKADKDVRRARAQASALRTKWALLCTAGGGGENNLLDSINV 743
AS D+ LKAKA+ L+ER + EK RL+A+ KV LS HIEKLML LKHEA KAKAHE R +E+ L++AR+ AL + ++D + EL EG+KILEDQLRLMDEKYMELRTKLD+TR K+V + +A AS+LR KWA G LLD + +
Sbjct: 44 ASDDLTLLKAKAMSLLERQKNEKELRLRAEAATKASNKKVLALSQHIEKLMLHLKHEAASKAKAHEAAGRAAQEVSLLRARNAALGKRAASRDSIIKELTEGAKILEDQLRLMDEKYMELRTKLDFTRMTTGKEVTKYKALASSLRAKWAAYSNNQG-----LLDELEM 207
BLAST of mRNA_S-dermatodea_contig10798.536.1 vs. uniprot
Match: A0A7S2DJE2_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DJE2_9STRA) HSP 1 Score: 126 bits (317), Expect = 4.000e-30 Identity = 75/147 (51.02%), Postives = 101/147 (68.71%), Query Frame = 3
Query: 246 DIMALKAKAIQLVERLRQEKTARLKADREMHKVAGKVQVLSDHIEKLMLFLKHEATQKAKAHEQQRRLQKELDLVKARSTALTRGNQAKDRVTIELREGSKILEDQLRLMDEKYMELRTKLDWTRTKADKDVRRARAQASALRTKWA 686
D++ LK + LV+R RQEK R +A+ KV +LS H+EKLML LKHEA KAKA E R +E+ L++ R+ AL + +KD + EL EG+KILEDQLRLMDEKYME+RTKLD+TRT + ++V + + ++S LR KWA
Sbjct: 14 DLLNLKGRQAALVDRQRQEKENRSRAEAATKNAIKKVVLLSQHVEKLMLHLKHEAVSKAKAQEAAGRAAQEVSLMRTRNKALNKRAASKDVMIRELSEGAKILEDQLRLMDEKYMEIRTKLDFTRTTSTREVAKHKQESSVLRAKWA 160
BLAST of mRNA_S-dermatodea_contig10798.536.1 vs. uniprot
Match: A0A5D6Y1X9_9STRA (JmjC domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1X9_9STRA) HSP 1 Score: 130 bits (327), Expect = 9.200e-29 Identity = 75/153 (49.02%), Postives = 105/153 (68.63%), Query Frame = 3
Query: 246 DIMALKAKAIQLVERLRQEKTARLKADREMHKVAGKVQVLSDHIEKLMLFLKHEATQKAKAHEQQRRLQKELDLVKARSTALTRGNQAKDRVTIELREGSKILEDQLRLMDEKYMELRTKLDWTRTKADKDVRRARAQASALRTKWALLCTAG 704
+ ALK KA++L R R EK R K++ + + + K+ LS+HIEK+M+ LKHEA KAKA + QRRL++EL K +S AL + + AKD EL +G++ILEDQLRLMDEK++++R KLDWTR + K+V++ + SALR KW L AG
Sbjct: 812 EFQALKEKAVELASRERVEKELRQKSESGLSEASAKIVALSEHIEKVMVHLKHEAAAKAKAVDAQRRLERELAECKDKSAALQKRSAAKDAELQELEQGARILEDQLRLMDEKFIDVRNKLDWTRATSQKEVKKLAGELSALRMKWQLASDAG 964
BLAST of mRNA_S-dermatodea_contig10798.536.1 vs. uniprot
Match: W4GXL6_9STRA (Uncharacterized protein n=14 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GXL6_9STRA) HSP 1 Score: 127 bits (320), Expect = 4.050e-28 Identity = 78/156 (50.00%), Postives = 99/156 (63.46%), Query Frame = 3
Query: 237 ASFDIMALKAKAIQLVERLRQEKTARLKADREMHKVAGKVQVLSDHIEKLMLFLKHEATQKAKAHEQQRRLQKELDLVKARSTALTRGNQAKDRVTIELREGSKILEDQLRLMDEKYMELRTKLDWTRTKADKDVRRARAQASALRTKWALLCTAG 704
A D+ ALK K +L R R EK R + D + + K+ LS+HIEKLM+ LKHEA KAKA E + ++ + + S LT+ AKDRV EL++GSKILEDQLRLMDEKY+ELR KLDWTRT + KD RR + + + LR KW L G
Sbjct: 384 AMDDVKALKEKTAELAGRQRTEKELRARTDAALVEANEKIVALSEHIEKLMVHLKHEAAAKAKALEALKAVEADRRDLADASATLTKKTNAKDRVISELQQGSKILEDQLRLMDEKYIELRNKLDWTRTTSQKDTRRLQHELNTLRCKWQLAMDTG 539 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10798.536.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10798.536.1 >prot_S-dermatodea_contig10798.536.1 ID=prot_S-dermatodea_contig10798.536.1|Name=mRNA_S-dermatodea_contig10798.536.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=365bp MALKAKAIQLVERLRQEKTARLKADREMHKVAGKVQVLSDHIEKLMLFLKback to top mRNA from alignment at S-dermatodea_contig10798:528..3072+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10798.536.1 ID=mRNA_S-dermatodea_contig10798.536.1|Name=mRNA_S-dermatodea_contig10798.536.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2545bp|location=Sequence derived from alignment at S-dermatodea_contig10798:528..3072+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10798:528..3072+ >mRNA_S-dermatodea_contig10798.536.1 ID=mRNA_S-dermatodea_contig10798.536.1|Name=mRNA_S-dermatodea_contig10798.536.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2190bp|location=Sequence derived from alignment at S-dermatodea_contig10798:528..3072+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |