mRNA_S-dermatodea_contig10776.525.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig10776.525.1
Unique NamemRNA_S-dermatodea_contig10776.525.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig10776.525.1 vs. uniprot
Match: D7FX56_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX56_ECTSI)

HSP 1 Score: 413 bits (1061), Expect = 3.350e-132
Identity = 217/316 (68.67%), Postives = 245/316 (77.53%), Query Frame = 1
Query:    1 THSLPQSYGLALEFLEELASSSRRKAEPLTSFTTRESLKEKWESQVVELKRAGRQVAAPEAAMSGAILSRKWEGGLVEYGSSIFLDVQWFATVLDPLLSLKKDPFGNICLGETRVKNHASLDRLDKEHILELQLPDELWGQKAAPHLLFALKSAGLTFLLPRDLTGGLVILLRMSET-PPDYHERKLKEVRQTRKHDLRLIVECEFSLGLPPGFIERLLARCCHLGSPYPFWR*GALIVGEGAEEGLFSLSLGYSEEKNILRVEVYGGCEEVHAWAALSKVISVIIEIRSKFPGLPWTPKFFSPRHEDKYMHIRTT 945
            T  LP SY LALE LEELASSSRRKAE  T   TR  L+EKW ++V EL  AG  VAAPEAAM GAIL RKWEGGLVEYG+ +FLDV+WFATVLDPL S ++D +G+I LG  RV N ASL RLD EH+ E QL +ELW  + APHLL ALKSAGLTF LP D  GGLVILLRM  T PP+Y  R+ +E  Q RK+DL L V C FSLGLPPGF+ERLLARCCHLG PYPFWR GALIVG GAE+GLFSLSL YSE  N+L+VEV GG EEVHAWAALSKV+SV+I++ S+FPGLP  P FF P+H+ K M IRTT
Sbjct:  660 TMHLPPSYRLALEMLEELASSSRRKAEQRTRGITRADLEEKWHAKVAELNGAGTPVAAPEAAMPGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDSYGDIDLGGIRVTNLASLRRLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTTRPPEYSIRR-EEANQARKYDLTLSVACSFSLGLPPGFVERLLARCCHLGYPYPFWRYGALIVGNGAEKGLFSLSLDYSEHDNMLKVEVLGGGEEVHAWAALSKVLSVMIKMLSEFPGLPCEPIFFCPQHKTKGMPIRTT 974          
BLAST of mRNA_S-dermatodea_contig10776.525.1 vs. uniprot
Match: D7FX69_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX69_ECTSI)

HSP 1 Score: 409 bits (1051), Expect = 5.030e-130
Identity = 211/315 (66.98%), Postives = 243/315 (77.14%), Query Frame = 1
Query:    1 THSLPQSYGLALEFLEELASSSRRKAEPLTSFTTRESLKEKWESQVVELKRAGRQVAAPEAAMSGAILSRKWEGGLVEYGSSIFLDVQWFATVLDPLLSLKKDPFGNICLGETRVKNHASLDRLDKEHILELQLPDELWGQKAAPHLLFALKSAGLTFLLPRDLTGGLVILLRMSETPPDYHERKLKEVRQTRKHDLRLIVECEFSLGLPPGFIERLLARCCHLGSPYPFWR*GALIVGEGAEEGLFSLSLGYSEEKNILRVEVYGGCEEVHAWAALSKVISVIIEIRSKFPGLPWTPKFFSPRHEDKYMHIRTT 945
            T  LP SY LALE LEELASSSRRKAE  T   TR  L+EKW ++V EL  AG  VAAPEAAM GAIL RKWEGGLVEYG+ +FLDV+WFATVLDPL S ++D +G+I LG  RV N ASL RLD EH+ E QL +ELW  + APHLL ALKSAGLTF LP D  GGLVILLRM  T P  +  KL++V +  + DLRL V C FSLGLPPGF+ERLLARCCH+G P+PFWR GALIVG GAE+GLFSLS+ YSEE  IL +EV+GGCEEVHAWAALSKV+SV+I++ S+FPGLP    FF P+H+ K M IRTT
Sbjct:  753 TMHLPPSYRLALEMLEELASSSRRKAEQRTRGITRADLEEKWHAKVAELNGAGTPVAAPEAAMPGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDSYGDIDLGGIRVTNLASLRRLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTTRPPEYGIKLEQVHKASEADLRLTVACSFSLGLPPGFVERLLARCCHMGYPFPFWRYGALIVGNGAEKGLFSLSVEYSEEDKILALEVFGGCEEVHAWAALSKVLSVMIKMLSEFPGLPCELMFFCPQHKTKGMPIRTT 1067          
BLAST of mRNA_S-dermatodea_contig10776.525.1 vs. uniprot
Match: A0A6H5KNW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNW8_9PHAE)

HSP 1 Score: 380 bits (976), Expect = 6.570e-127
Identity = 194/294 (65.99%), Postives = 231/294 (78.57%), Query Frame = 1
Query:   67 RRKAEPLTSFTTRESLKEKWESQVVELKRAGRQVAAPEAAMSGAILSRKWEGGLVEYGSSIFLDVQWFATVLDPLLSLKKDPFGNICLGETRVKNHASLDRLDKEHILELQLPDELWGQKAAPHLLFALKSAGLTFLLPRDLTGGLVILLRM-SETPPDYHERKLKEVRQTRKHDLRLIVECEFSLGLPPGFIERLLARCCHLGSPYPFWR*GALIVGEGAEEGLFSLSLGYSEEKNILRVEVYGGCEEVHAWAALSKVISVIIEIRSKFPGLPWTPKFFSPRHEDKYMHIRTT 945
            RRKA+  T   TR  L+EKW+++V EL  AG  VAAPEAA+SGAIL RKWEGGLVEYG+ +FLDV+WFATVLDPL S ++D +G+I LG  RV N ASL RLD EH+ E QL +ELW ++ APHLL ALKSAGLTF LP D  GGLVILLRM +++PP+Y  R+ +E  Q RK+DL L V C FSLG+PPGF+ERLLARCC LG PYPFWR GAL+VG GAEEGLFSLSL YSE  N+L+VEV GG  EVHAWAALSKV+SV+I++ S+FPGLP  P FF P+H+ K M +RTT
Sbjct:   15 RRKAKRRTRGITRADLEEKWQAKVAELSGAGTPVAAPEAAISGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDSYGDIDLGGIRVTNIASLRRLDNEHVFEPQLAEELWSRELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTKSPPEYSIRR-EEANQARKYDLTLTVACWFSLGVPPGFVERLLARCCRLGVPYPFWRYGALVVGNGAEEGLFSLSLDYSEHDNMLKVEVLGGGGEVHAWAALSKVLSVMIKMLSEFPGLPCEPIFFCPQHKTKGMPVRTT 307          
BLAST of mRNA_S-dermatodea_contig10776.525.1 vs. uniprot
Match: D7FJV1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV1_ECTSI)

HSP 1 Score: 394 bits (1011), Expect = 1.680e-125
Identity = 206/314 (65.61%), Postives = 234/314 (74.52%), Query Frame = 1
Query:    1 THSLPQSYGLALEFLEELASSSRRKAEPLTSFTTRESLKEKWESQVVELKRAGRQVAAPEAAMSGAILSRKWEGGLVEYGSSIFLDVQWFATVLDPLLSLKKDPFGNICLGETRVKNHASLDRLDKEHILELQLPDELWGQKAAPHLLFALKSAGLTFLLPRDLTGGLVILLRMSETPPDYHERKLKEVRQTRKHDLRLIVECEFSLGLPPGFIERLLARCCHLGSPYPFWR*GALIVGEGAEEGLFSLSLGYSEEKNILRVEVYGGCEEVHAWAALSKVISVIIEIRSKFPGLPWTPKFFSPRHEDKYMHIRT 942
            T  LP+SY LALE LEELAS SR K E  T   TR  L+EKW+++V E+ RAG  VAAP+AAM+GAIL RKWEGGLVEYGS +FLDV+WFATVLDPL   K+D +G I LG  RV +  SLDRLD+EH+LE QL ++LWG   APHLL ALKSAGLTF L  D  GGLVILLRM   PP  +  KLKE  Q  K DLRL+VEC F LGLPPGF+ERLLARCCHLG PYPFWR GALIVG+GAEE +FSLSL YSE + IL VEV GG  EV AWAALSKV+SV I++  +FPGLP    FF P H+   M IRT
Sbjct:  589 TMRLPESYRLALEMLEELASCSRSKTEQQTRGITRAILEEKWQAKVAEMNRAGTSVAAPDAAMAGAILIRKWEGGLVEYGSYVFLDVEWFATVLDPLFCHKRDSYGKIDLGGIRVMDVDSLDRLDEEHVLEPQLAEDLWGPVLAPHLLLALKSAGLTFPLSNDSNGGLVILLRMDTKPPPDYGIKLKEKDQANKFDLRLVVECSFRLGLPPGFVERLLARCCHLGLPYPFWRYGALIVGKGAEERMFSLSLEYSEARKILTVEVSGGHTEVFAWAALSKVLSVTIKMLLEFPGLPCRTTFFCPLHKTNGMKIRT 902          
BLAST of mRNA_S-dermatodea_contig10776.525.1 vs. uniprot
Match: A0A6H5JSC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC0_9PHAE)

HSP 1 Score: 348 bits (893), Expect = 3.380e-111
Identity = 186/314 (59.24%), Postives = 218/314 (69.43%), Query Frame = 1
Query:    1 THSLPQSYGLALEFLEELASSSRRKAEPLTSFTTRESLKEKWESQVVELKRAGRQVAAPEAAMSGAILSRKWEGGLVEYGSSIFLDVQWFATVLDPLLSLKKDPFGNICLGETRVKNHASLDRLDKEHILELQLPDELWGQKAAPHLLFALKSAGLTFLLPRDLTGGLVILLRMSETPPDYHERKLKEVRQTRKHDLRLIVECEFSLGLPPGFIERLLARCCHLGSPYPFWR*GALIVGEGAEEGLFSLSLGYSEEKNILRVEVYGGCEEVHAWAALSKVISVIIEIRSKFPGLPWTPKFFSPRHEDKYMHIRT 942
            T  LP+SY LAL+ LEELAS SR K E      TR  L++KW+++V E+ R G  V+AP+AAM+GAIL RKWEGGLVEY S +FLDV+WFATVLDPL   K+D +G I LG  RV +   LDRLD++H+LE QL +E W   +                LP D  GGLVILLRM   P   +  KLKE  Q  K DLRL+VEC FSLGLPPGF+ERLLARCCHLG PYPFWR GALIVG+GAE  +FSLSL YSEE+ IL VEV GG  EV AWAALSKV+SV I++ S+FPGLP    FF P H+ K M IRT
Sbjct:  299 TMHLPESYRLALKMLEELASCSRSKTEQHIRGVTRAILEDKWQTKVAEMNRVGTSVSAPDAAMAGAILIRKWEGGLVEYSSYVFLDVEWFATVLDPLFCHKRDSYGKIYLGGMRVTDVDGLDRLDEDHVLEPQLAEEDWRFPS----------------LPNDSNGGLVILLRMDTKPSPDYGIKLKEADQANKFDLRLVVECSFSLGLPPGFVERLLARCCHLGLPYPFWRYGALIVGKGAEVRMFSLSLEYSEERKILTVEVSGGRTEVFAWAALSKVLSVTIKMLSEFPGLPCGTTFFCPLHKTKRMKIRT 596          
BLAST of mRNA_S-dermatodea_contig10776.525.1 vs. uniprot
Match: A0A6H5JRW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRW5_9PHAE)

HSP 1 Score: 333 bits (853), Expect = 1.730e-104
Identity = 183/307 (59.61%), Postives = 209/307 (68.08%), Query Frame = 1
Query:   22 YGLALEFLEELASSSRRKAEPLTSFTTRESLKEKWESQVVELKRAGRQVAAPEAAMSGAILSRKWEGGLVEYGSSIFLDVQWFATVLDPLLSLKKDPFGNICLGETRVKNHASLDRLDKEHILELQLPDELWGQKAAPHLLFALKSAGLTFLLPRDLTGGLVILLRM-SETPPDYHERKLKEVRQTRKH-DLRLIVECEFSLGLPPGFIERLLARCCHLGSPYPFWR*GALIVGEGAEEGLFSLSLGYSEEKNILRVEVYGGCEEVHAWAALSKVISVIIEIRSKFPGLPWTPKFFSPRHEDKYMHI 936
            Y LAL  LEELAS SR                      V  L  AG   AA EAA+SGAIL RKWEGGLVEYG+ IFLDV WFA VLDPL S KKD  G I LG   V N  SL RLD  HI E +L ++LWG + APHLL AL SAGLTF +P D   GLV++LRM +E PPDY  R + E  Q RK+ DLRL+V+C F LGLPPGF+ERLLARCCHLG P+PFWR GAL+VG GAEEG FSL+L YSEE   L+V+V G C EVHAWA LSKV+SV I++ S+FPGLP   +F  PRHEDK M +
Sbjct:  297 YVLALNLLEELASRSR----------------------VDALGTAGTTAAASEAALSGAILIRKWEGGLVEYGNYIFLDVGWFADVLDPLFSHKKDSNGIIYLGGKTVTNDDSLKRLDANHIFEPRLAEDLWGAELAPHLLSALNSAGLTFPIPNDPFEGLVVVLRMDTEPPPDY--RTIVEEEQARKYYDLRLVVQCSFRLGLPPGFVERLLARCCHLGFPHPFWRYGALVVGAGAEEGKFSLTLEYSEEDKTLKVQVNGRCSEVHAWATLSKVLSVTIKMLSEFPGLPCQLEFLCPRHEDKSMRV 579          
BLAST of mRNA_S-dermatodea_contig10776.525.1 vs. uniprot
Match: A0A6H5KED3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KED3_9PHAE)

HSP 1 Score: 289 bits (740), Expect = 1.810e-92
Identity = 146/247 (59.11%), Postives = 179/247 (72.47%), Query Frame = 1
Query:  199 ILSRKWEGGLVEYGSSIFLDVQWFATVLDPLLSLKKDPFGNICLGETRV-KNHASLDRLDKEHILELQLPDELWGQKAAPHLLFALKSAGLTFLLPRDLTGGLVILLRMSETPPDYHERKLKEVRQTRKHDLRLIVECEFSLGLPPGFIERLLARCCHLGSPYPFWR*GALIVGEGAEEGLFSLSLGYSEEKNILRVEVYGGCEEVHAWAALSKVISVIIEIRSKFPGLPWTPKFFSPRHEDKYMHI 936
            I+  KWEGGLVEYGS +FLDVQWFA VLDPL S K++ +G+I LG   V KN  SL RLD +HI E +L +ELWG   A HLL ALKSAGLTF +P D   GLVIL+RM + PP  ++ KLK+    RK+DL+LI  C+F LGLPPG IER+LARCC LG PYPFWR GALI GEG + G FS  L YS+E  +L + V+GG E+V AWA LSKV+SV+I++ S++ GLP  P+ F P HE+K M I
Sbjct:    2 IVVEKWEGGLVEYGSYVFLDVQWFAEVLDPLFSHKRNLYGSIDLGGRSVTKNVRSLRRLDNDHIFEPRLAEELWGPDLARHLLAALKSAGLTFPMPNDPNEGLVILVRMKDKPPPGYDTKLKQAIAARKYDLKLIFHCKFRLGLPPGLIERILARCCQLGHPYPFWRYGALISGEGGQ-GSFSADLRYSDENKLLEIVVHGGREKVDAWATLSKVLSVLIKMLSEYGGLPCEPQLFCPLHEEKSMPI 247          
BLAST of mRNA_S-dermatodea_contig10776.525.1 vs. uniprot
Match: A0A6H5KZA7_9PHAE (G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZA7_9PHAE)

HSP 1 Score: 252 bits (644), Expect = 2.020e-75
Identity = 147/289 (50.87%), Postives = 182/289 (62.98%), Query Frame = 1
Query:    1 THSLPQSYGLALEFLEELASSSRRKAEPLTSFTTRESLKEKWESQVVELKRAGRQVAAPEAAMSGAILSRKWEGGLVEYGSSIFLDVQWFATVLDPLLSLKKDPFGNICLGETRVKN--HASLDRLDKEHILELQLPDELWGQKAAPHLLFALKSAGLTFLLPRDLTGGLVILLRMSETPPDYHERKLKEVRQTRKHDLRLIVECEFSLGLPPGFIERLLARCCHLGSPYPFWR*GALIVGEGAEEGLFSLSLGYSEEKNILRVEVYGGCEEVHAWAALSKVISVIIEI 861
            T  +P  Y +ALE LEELASSSRRKAE  T   TR  L++KW+++V EL  AG  VAAPEAAMSGAIL                             +S K+D  G+I LG  RV N   A LDRLD++H+ E +L + LW  + A HLL ALKSAGLTF LP+D  GGLVI LRM  T    +  KL++V +  + DL+L V+C FSLGLP GF+ER LA+CCH+G PYPFWR GALIV +G +               IL +EV+GGCEEVHAWAALSKV+SV+I++
Sbjct:  312 TMHIPPGYQVALEMLEELASSSRRKAEQRTRGITRADLEQKWQAKVAELNSAGTPVAAPEAAMSGAIL-----------------------------ISHKRDLDGHIDLGGIRVPNDARARLDRLDRDHVFEPKLAEGLWSPELASHLLLALKSAGLTFPLPQDSNGGLVINLRMDTTRLPEYGIKLEQVHKASEPDLKLTVKCSFSLGLPLGFVERFLAQCCHVGYPYPFWRYGALIVDDGDK---------------ILALEVFGGCEEVHAWAALSKVLSVVIKM 556          
BLAST of mRNA_S-dermatodea_contig10776.525.1 vs. uniprot
Match: D7FL89_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL89_ECTSI)

HSP 1 Score: 182 bits (461), Expect = 8.870e-48
Identity = 113/292 (38.70%), Postives = 160/292 (54.79%), Query Frame = 1
Query:  100 TRESLKEKWESQVVELKRAGRQVAAPEAAMSGAILSRKWEGGLVEYGSSIFLDVQWFATVLDPLLSLK--KDPF-GNICLGETRV-----KNHASLDRLDKEHILELQLPDELWGQKAAPHLLFALKSAGLTFLLPRDLTGGLVILLRMSETPPDYHERKLKEVRQTRKHDLRLIVECEFSLGLPPGFIERLLARCCHLGSPYPFWR*GALI---VGEGAEEGLFSLSLGYSEEKNILRVEVYGGCEEVHAWAALSKVISVIIEIRSKFPGLPWTPKFFSPRHEDKYMHIRT 942
            TR  L  KW   V  L+  G  +  P+ A+ GA+L R+ EG LV + + +FLDV W A +L PLL+ +  +DP  G++ LG+T +     K+ AS +RL    +LE +L   LW    + ++L  L S GLT+ L  D   GLV+LLR+ E  P+   ++L + R  R H   L V+ +  LG+PPG IE++L RCC LG+   FWR G L+   +G G     F+L + YS +   + +EVYG       WAALS  ISV   + S+FPGL W      P+HE      RT
Sbjct:  539 TRADLSTKWNDVVAALEEDGVSIVNPDHALEGALLIREHEGSLVRHETYVFLDVTWLAQILKPLLNHRDDEDPLRGDVSLGDTGITLKEDKHIASWNRLKGHGVLEPELAGVLWPDGLSNYVLPTLDSLGLTYPLDDDPAEGLVVLLRLDEKRPEDVGKELDDFR--RDHTAVLSVKWKIFLGVPPGAIEKMLTRCCRLGTLRTFWRFGVLVQGSLGGGMAAKTFALLIEYSHDTCEVDMEVYGSIRTAAPWAALSYGISVFQAMCSEFPGLRWRASLKCPQHEQDMQISRT 828          
BLAST of mRNA_S-dermatodea_contig10776.525.1 vs. uniprot
Match: D7FL98_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL98_ECTSI)

HSP 1 Score: 179 bits (455), Expect = 5.630e-47
Identity = 113/284 (39.79%), Postives = 159/284 (55.99%), Query Frame = 1
Query:  100 TRESLKEKWESQVVELKRAGRQVAAPEAAMSGAILSRKWEGGLVEYGSSIFLDVQWFATVLDPLLSLK--KDPF-GNICLGETRV-----KNHASLDRLDKEHILELQLPDELWGQKAAPHLLFALKSAGLTFLLPRDLTGGLVILLRMSETPPDYHERKLKEVRQTRKHDLRLIVECEFSLGLPPGFIERLLARCCHLGSPYPFWR*GALI---VGEGAEEGLFSLSLGYSEEKNILRVEVYGGCEEVHAWAALSKVISVIIEIRSKFPGLPWTPKFFSPRHE 918
            TR  L  KW   V  L+  G  V  P+ A+ GA+L R+ EG LV + + +FLDV W A +L PLL+ +  +DP  G++ LG+T +     K+ AS +RL    +LE  L   LW    + ++L AL S GLT+ L  D   GLV+LLR+ E  P+   ++L + R  R H   L V+ +  LG+PPG IE++L RCC LG+   FWR G L+   +G G     F+L + YS +K  + ++VYG       WAALS  ISV   + S+FPGL W      P+HE
Sbjct:  575 TRADLSTKWNEVVAALEGDGVSVVKPDHALEGALLIREHEGSLVRHETYVFLDVTWLAQILKPLLNHRDDEDPLRGDVSLGDTGITLKEDKHIASWNRLKGHGVLEPSLARVLWPDGLSNYVLPALDSLGLTYPLDDDPAEGLVVLLRLDEKRPEDVGKELDDFR--RDHTAVLSVKWKVFLGVPPGAIEKMLTRCCRLGTLRTFWRFGVLVQGSLGGGIAARTFALVVEYSHDKCEVDMKVYGSISTAAPWAALSFGISVFQAMCSEFPGLRWRAALKCPQHE 856          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10776.525.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7FX56_ECTSI3.350e-13268.67LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FX69_ECTSI5.030e-13066.98LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5KNW8_9PHAE6.570e-12765.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJV1_ECTSI1.680e-12565.61LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JSC0_9PHAE3.380e-11159.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRW5_9PHAE1.730e-10459.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KED3_9PHAE1.810e-9259.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZA7_9PHAE2.020e-7550.87G domain-containing protein n=1 Tax=Ectocarpus sp.... [more]
D7FL89_ECTSI8.870e-4838.70LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FL98_ECTSI5.630e-4739.79LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10776contigS-dermatodea_contig10776:5951..7492 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score245.7
Seed ortholog evalue1.5e-62
Seed eggNOG ortholog2880.D7FJV1
KEGG rclassRC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248
KEGG koko:K01188
KEGG ReactionR00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040
KEGG Pathwayko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110
GOsGO:0000003,GO:0003002,GO:0003006,GO:0003674,GO:0004857,GO:0007275,GO:0007389,GO:0008150,GO:0009791,GO:0009908,GO:0022414,GO:0030234,GO:0032501,GO:0032502,GO:0043086,GO:0044092,GO:0048367,GO:0048608,GO:0048731,GO:0048832,GO:0048833,GO:0048856,GO:0050789,GO:0050790,GO:0050793,GO:0061458,GO:0065007,GO:0065009,GO:0090567,GO:0098772
EggNOG OGs2CYK8@1,2S4YE@2759
EC3.2.1.21
CAZyGH1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Exons3
Model size945
Cds size513
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10776.525.1prot_S-dermatodea_contig10776.525.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig10776 6430..7246 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924172.747698-UTR-S-dermatodea_contig10776:5950..60181622924172.747698-UTR-S-dermatodea_contig10776:5950..6018Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10776 5951..6018 +
1694079067.4689863-UTR-S-dermatodea_contig10776:5950..60181694079067.4689863-UTR-S-dermatodea_contig10776:5950..6018Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10776 5951..6018 +
1622924172.7604458-UTR-S-dermatodea_contig10776:6311..64291622924172.7604458-UTR-S-dermatodea_contig10776:6311..6429Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10776 6312..6429 +
1694079067.4923112-UTR-S-dermatodea_contig10776:6311..64291694079067.4923112-UTR-S-dermatodea_contig10776:6311..6429Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10776 6312..6429 +
1622924172.7872055-UTR-S-dermatodea_contig10776:7246..74921622924172.7872055-UTR-S-dermatodea_contig10776:7246..7492Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10776 7247..7492 +
1694079067.5312083-UTR-S-dermatodea_contig10776:7246..74921694079067.5312083-UTR-S-dermatodea_contig10776:7246..7492Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10776 7247..7492 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924172.7703419-CDS-S-dermatodea_contig10776:6429..64521622924172.7703419-CDS-S-dermatodea_contig10776:6429..6452Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10776 6430..6452 +
1694079067.5091999-CDS-S-dermatodea_contig10776:6429..64521694079067.5091999-CDS-S-dermatodea_contig10776:6429..6452Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10776 6430..6452 +
1622924172.7786796-CDS-S-dermatodea_contig10776:6756..72461622924172.7786796-CDS-S-dermatodea_contig10776:6756..7246Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10776 6757..7246 +
1694079067.5204246-CDS-S-dermatodea_contig10776:6756..72461694079067.5204246-CDS-S-dermatodea_contig10776:6756..7246Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10776 6757..7246 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig10776.525.1

>prot_S-dermatodea_contig10776.525.1 ID=prot_S-dermatodea_contig10776.525.1|Name=mRNA_S-dermatodea_contig10776.525.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=171bp
MSGAILSRKWEGGLVEYGSSIFLDVQWFATVLDPLLSLKKDPFGNICLGE
TRVKNHASLDRLDKEHILELQLPDELWGQKAAPHLLFALKSAGLTFLLPR
DLTGGLVILLRMSETPPDYHERKLKEVRQTRKHDLRLIVECEFSLGLPPG
FIERLLARCCHLGSPYPFWR*
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mRNA from alignment at S-dermatodea_contig10776:5951..7492+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig10776.525.1 ID=mRNA_S-dermatodea_contig10776.525.1|Name=mRNA_S-dermatodea_contig10776.525.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1542bp|location=Sequence derived from alignment at S-dermatodea_contig10776:5951..7492+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ACTCACAGTCTTCCGCAGAGCTATGGACTCGCCCTTGAGTTTCTTGAGGA GCTGGCGTCATCTAGTAGGTACGGTCACCGATGCCATGTCTGTGTCGCGA TTTCATGTATCTTCCCATACAATCCTGATATATACCAATACACACTCGTC ACCTGACACAACGCTGTACACGTTCGTGGTGTGTTTTTTCCCAGCGAGCG ACAGCCTTGGTTTTGCCCACTCATGCATTTGTGGACTGTGCACACCTTTA CTCGAAGGATGATAAAATATTGAGCTACGATTGTTGTGTTGTTTTTCTCA AGTTCGTCACCGCTTTACAGAAATTCCATCTTCTCATACTCGCACCCGTT CGTTCGTTTAGACGCAAGGCTGAGCCGCTAACCTCATTCACCACAAGAGA GAGTTTAAAGGAGAAGTGGGAAAGCCAGGTAGTGGAGCTGAAACGAGCTG GAAGGCAGGTAGCAGCCCCAGAAGCGGCCATGTCTGGTGCGATCTTGAGC AGGTGACTCCGATATCGGCGTTACTGGTTTTTGGTTAGCGTGGTGGATGG GTGCCTCAGGAATATCGGGTTTCCAAGTCCTTGTACGTATATGAACCGGT TGTTTAGATGTGAAGTTCTGTGTTTGTGATAATAGTTTGCAGCAAATCAG AAAAGAGGTCCACGCGGATACGATTGTAAGAGCCATGTCAGTCAGTGGAG TTGGTGCAGGTTTGAACTCTGCTCTGCGTCCCATATGTTGTCGGGTCCGG CTTTGAATCCCGAGACGCCCTTGCCGTGCTGTATCCCACGACCGCACTGT ATACAGGAAGTGGGAGGGAGGACTGGTGGAGTACGGCAGCTCCATCTTCC TCGACGTCCAATGGTTTGCCACAGTCCTGGACCCATTGCTGAGTCTCAAG AAAGATCCGTTCGGCAACATATGTCTCGGTGAAACCAGAGTGAAGAACCA TGCCAGCTTGGACAGGCTAGACAAGGAACATATTTTGGAGCTGCAACTCC CTGACGAGCTGTGGGGCCAAAAAGCCGCACCGCATCTTCTCTTCGCTTTG AAGAGTGCAGGGCTGACGTTTCTCCTTCCGAGAGACCTTACCGGCGGTTT GGTGATCCTCTTGCGGATGAGCGAAACGCCCCCAGATTACCACGAGAGGA AGTTGAAGGAAGTACGCCAAACTAGGAAGCACGACCTCAGGCTCATCGTT GAATGCGAGTTCAGTCTAGGATTGCCCCCGGGCTTCATTGAGCGTCTCCT TGCGCGGTGCTGCCACTTGGGCTCTCCGTACCCCTTCTGGCGGTAGGGAG CTCTGATCGTGGGTGAAGGTGCGGAAGAAGGGTTGTTCTCCCTGAGTTTG GGGTACTCCGAGGAGAAAAATATCCTGAGAGTGGAGGTGTACGGAGGATG TGAGGAAGTCCATGCGTGGGCGGCTCTGTCGAAAGTAATCTCCGTAATTA TCGAGATACGCTCGAAGTTTCCTGGTTTACCGTGGACGCCAAAATTTTTC TCCCCACGGCACGAGGACAAGTACATGCACATCAGGACGACC
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Coding sequence (CDS) from alignment at S-dermatodea_contig10776:5951..7492+

>mRNA_S-dermatodea_contig10776.525.1 ID=mRNA_S-dermatodea_contig10776.525.1|Name=mRNA_S-dermatodea_contig10776.525.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1026bp|location=Sequence derived from alignment at S-dermatodea_contig10776:5951..7492+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGTCTGGTGCGATCTTGAGCAGATGTCTGGTGCGATCTTGAGCAGGAAG
TGGGAGGGAGGACTGGTGGAGTACGGCAGCTCCATCTTCCTCGACGTCCA
ATGGTTTGCCACAGTCCTGGACCCATTGCTGAGTCTCAAGAAAGATCCGT
TCGGCAACATATGTCTCGGTGAAACCAGAGTGAAGAACCATGCCAGCTTG
GACAGGCTAGACAAGGAACATATTTTGGAGCTGCAACTCCCTGACGAGCT
GTGGGGCCAAAAAGCCGCACCGCATCTTCTCTTCGCTTTGAAGAGTGCAG
GGCTGACGTTTCTCCTTCCGAGAGACCTTACCGGCGGTTTGGTGATCCTC
TTGCGGATGAGCGAAACGCCCCCAGATTACCACGAGAGGAAGTTGAAGGA
AGTACGCCAAACTAGGAAGCACGACCTCAGGCTCATCGTTGAATGCGAGT
TCAGTCTAGGATTGCCCCCGGGCTTCATTGAGCGTCTCCTTGCGCGGTGC
TGCCACTTGGGCTCTCCGTACCCCTTCTGGCGGTAGGAAGTGGGAGGGAG
GACTGGTGGAGTACGGCAGCTCCATCTTCCTCGACGTCCAATGGTTTGCC
ACAGTCCTGGACCCATTGCTGAGTCTCAAGAAAGATCCGTTCGGCAACAT
ATGTCTCGGTGAAACCAGAGTGAAGAACCATGCCAGCTTGGACAGGCTAG
ACAAGGAACATATTTTGGAGCTGCAACTCCCTGACGAGCTGTGGGGCCAA
AAAGCCGCACCGCATCTTCTCTTCGCTTTGAAGAGTGCAGGGCTGACGTT
TCTCCTTCCGAGAGACCTTACCGGCGGTTTGGTGATCCTCTTGCGGATGA
GCGAAACGCCCCCAGATTACCACGAGAGGAAGTTGAAGGAAGTACGCCAA
ACTAGGAAGCACGACCTCAGGCTCATCGTTGAATGCGAGTTCAGTCTAGG
ATTGCCCCCGGGCTTCATTGAGCGTCTCCTTGCGCGGTGCTGCCACTTGG
GCTCTCCGTACCCCTTCTGGCGGTAG
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