mRNA_S-dermatodea_contig10765.519.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10765.519.1 vs. uniprot
Match: F6MHT6_SACJA (Carbonic anhydrase n=1 Tax=Saccharina japonica TaxID=88149 RepID=F6MHT6_SACJA) HSP 1 Score: 280 bits (717), Expect = 8.990e-93 Identity = 129/175 (73.71%), Postives = 147/175 (84.00%), Query Frame = 1
Query: 1 QVKFDKCSDTPHLVFDGETYNLLQIHIHSPSEHMIGGSVHDAEIHWVHLKEGTTDSLLVVGVLFDTSEYGHNVEIQHLWDVLEIGEETTEEAFVTRAYDVLPSNPTFSHYIGSLTTPPCTEGVKWIVMSDAVVMGEMQLEDFRRSVAFYDDSKVDKQGNTNRPYQPLNGRDVFLV 525
++ F CSD PH+ F GE YNLLQIHIHSPSEHMIGGS H AEIHWVH+KEGT D LLVVGVLFDT++YG NVEI+HLWDVL+IGE TT+E F TR YD++PSNP FSHY+GSLTTPPCTEGVKWIVMSD V M +MQL++FR SVA +DDSKVD+ GNTNRP Q LN R +F V
Sbjct: 114 EILFGGCSDVPHVEFKGERYNLLQIHIHSPSEHMIGGSEHSAEIHWVHVKEGTEDQLLVVGVLFDTTDYGSNVEIEHLWDVLDIGETTTKEVFTTRIYDIMPSNPVFSHYMGSLTTPPCTEGVKWIVMSDPVTMSKMQLDEFRTSVALFDDSKVDEHGNTNRPGQSLNDRKIFFV 288
BLAST of mRNA_S-dermatodea_contig10765.519.1 vs. uniprot
Match: Q9SMD6_9PHAE (Carbonic anhydrase alpha type (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q9SMD6_9PHAE) HSP 1 Score: 232 bits (592), Expect = 7.160e-76 Identity = 105/142 (73.94%), Postives = 124/142 (87.32%), Query Frame = 1
Query: 100 MIGGSVHDAEIHWVHLKEGTTDSLLVVGVLFDTSEYGHNVEIQHLWDVLEIGEETTEEAFVTRAYDVLPSNPTFSHYIGSLTTPPCTEGVKWIVMSDAVVMGEMQLEDFRRSVAFYDDSKVDKQGNTNRPYQPLNGRDVFLV 525
MIGGS H+AEIHWVH+K GT D LLV+GVLFDT++YG NVEI+HLWDVL+IG+ TT+E FVTR YD++PSNP FSHY+GSLTTPPCTEGVKWIVMSD V MG+MQL++FR SVA +D+SKVD+ GNTNRP Q LN RD+F V
Sbjct: 1 MIGGSEHEAEIHWVHVKAGTDDQLLVIGVLFDTTQYGSNVEIEHLWDVLDIGKPTTDEVFVTRVYDIMPSNPVFSHYMGSLTTPPCTEGVKWIVMSDPVTMGKMQLDEFRTSVALFDNSKVDEMGNTNRPRQSLNNRDIFFV 142
BLAST of mRNA_S-dermatodea_contig10765.519.1 vs. uniprot
Match: D8LB10_ECTSI (Carbonic anhydrase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB10_ECTSI) HSP 1 Score: 223 bits (568), Expect = 4.160e-70 Identity = 100/175 (57.14%), Postives = 135/175 (77.14%), Query Frame = 1
Query: 1 QVKFDKCSDTPHLVFDGETYNLLQIHIHSPSEHMIGGSVHDAEIHWVHLKEGTTDSLLVVGVLFDTSEYGHNVEIQHLWDVLEIGEETTEEAFVTRAYDVLPSNPTFSHYIGSLTTPPCTEGVKWIVMSDAVVMGEMQLEDFRRSVAFYDDSKVDKQGNTNRPYQPLNGRDVFLV 525
QV F C+D P+L + GETYNLLQ HIHSPSEH++GG+ H AEIH VHLK+ TTD LLVVG++F+ S+YG NVE++ +W+V+++ ++ EE F+ AY +LP+ P+F+ Y GSLTTPPCTEGV+WI+MS+ M QL+++RR+VA ++ SKV + G TNRP Q LNGRDV V
Sbjct: 119 QVDFSGCTDAPYLQYQGETYNLLQFHIHSPSEHVLGGAEHAAEIHLVHLKQNTTDGLLVVGIMFEVSDYGQNVELEPMWNVMDLNQDIAEEQFMAAAYSLLPATPSFTTYSGSLTTPPCTEGVRWILMSEPNYMSTWQLDNYRRAVALHEGSKVSEVGATNRPIQELNGRDVLYV 293
BLAST of mRNA_S-dermatodea_contig10765.519.1 vs. uniprot
Match: A0A872YNN4_SACJA (Carbonic anhydrase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A872YNN4_SACJA) HSP 1 Score: 190 bits (483), Expect = 2.900e-57 Identity = 92/178 (51.69%), Postives = 128/178 (71.91%), Query Frame = 1
Query: 1 QVKFDKCSDTPHLVFDGETYNLLQIHIHSPSEHMIGGSVHDAEIHWVHLKE---GTTDSLLVVGVLFDTSEYGHNVEIQHLWDVLEIGEETTEEAFVTRAYDVLPSNPTFSHYIGSLTTPPCTEGVKWIVMSDAVVMGEMQLEDFRRSVAFYDDSKVDKQGNTNRPYQPLNGRDVFLV 525
++ F +C+ T +L FDG Y+LLQ+HIHSPSEHM+ GS+HDAEIH VH ++ GT LLV+GV D E+G NV ++ LWDVL G + V Y+++PS+ +SHY+GSLTTPPC+E V+W+VMS V+G++QL+ FR SVA +S+VD++ NTNRP Q +NGR V++V
Sbjct: 121 EIDFSECTSTSNLSFDGGKYSLLQMHIHSPSEHMVAGSLHDAEIHLVHSRDDSDGTESELLVIGVFLDAKEHGWNVALEPLWDVLGSG---AKPRGVINPYELIPSDMAYSHYMGSLTTPPCSEIVRWVVMSTPTVIGDLQLDIFRDSVATATNSQVDERSNTNRPGQAINGRAVYIV 295
BLAST of mRNA_S-dermatodea_contig10765.519.1 vs. uniprot
Match: H6WB77_VAULI (Carbonic anhydrase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB77_VAULI) HSP 1 Score: 130 bits (326), Expect = 4.430e-34 Identity = 79/197 (40.10%), Postives = 106/197 (53.81%), Query Frame = 1
Query: 4 VKFDK-CSDTPHLVFDGETYNLLQIHIHSPSEHMIGGSVHDAEIHWVHLKEGTTDSLLVVGVLFD-TSEYGHNVEIQHLWDVL-----------EIGEETTEEAFVTRA------------YDVLPSNPTFSHYIGSLTTPPCTEGVKWIVMSDAVVMGEMQLEDFRRSVAFYDDSKVDKQGNTNRPYQPLNGRDVF 519
V FD C TP + +G +NLLQ H+HS SEH+IGG +DAEIH+VH SL VVGV+ TS+ N+E W+ + EI E++T A Y +LP++ T+ +Y+GSLTTPPC+E V WIVM + + + QLE FR + + VD GN RP QP NGR V+
Sbjct: 60 VTFDGYCQTTPTITINGAVFNLLQFHLHSVSEHVIGGGYYDAEIHFVHYSALDPTSLAVVGVMISSTSDNVGNLEFAKYWEHMAYVSGKQQYASEIVEKSTATMVSATASSSMSAMEQVNPYSMLPADGTYYNYLGSLTTPPCSETVTWIVMKEGITVSPDQLEAFRAGLMDPEFPLVDNYGNNARPPQPTNGRMVY 256
BLAST of mRNA_S-dermatodea_contig10765.519.1 vs. uniprot
Match: H6WB76_VAULI (Carbonic anhydrase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB76_VAULI) HSP 1 Score: 120 bits (302), Expect = 8.850e-30 Identity = 76/202 (37.62%), Postives = 106/202 (52.48%), Query Frame = 1
Query: 4 VKFDK-CSDTPHLVFDGETYNLLQIHIHSPSEHMIGGSVHDAEIHWVHLKEGTTDSLLVVGVLFD-TSEYGHNVEI--------------QHLWDVLE-------------IGEETTEEAFV-TRAYDVLPSNPTFSHYIGSLTTPPCTEGVKWIVMSDAVVMGEMQLEDFRRSVAFYDDSKVDKQGNTNRPYQPLNGRDVF 519
V FD C TP + +G +NLLQ H+HS SEH+IGG +DAEIH+VH SL VVGV+ TS+ N+E ++ +++E + T+ A Y +LP++ T+ +Y+GSLTTPPC+E V WIVM + + + QLE FR + + VD GN RP QP NGR V+
Sbjct: 136 VTFDGYCQTTPTITINGAVFNLLQFHLHSVSEHVIGGGYYDAEIHFVHYSALDPTSLAVVGVMISSTSDNIGNLEFTKYAEHMAYVSGKQKYASEIMETDATMAPAATPSSMASSTSMSAMEQVNPYSMLPADGTYYNYLGSLTTPPCSETVTWIVMKEGITVSPDQLEAFRAGLMDPEFPLVDNYGNNARPPQPTNGRMVY 337
BLAST of mRNA_S-dermatodea_contig10765.519.1 vs. uniprot
Match: A0A2E3J3Q0_9BACT (Carbonic anhydrase n=2 Tax=FCB group TaxID=1783270 RepID=A0A2E3J3Q0_9BACT) HSP 1 Score: 117 bits (294), Expect = 2.580e-29 Identity = 68/163 (41.72%), Postives = 90/163 (55.21%), Query Frame = 1
Query: 37 LVFDGETYNLLQIHIHSPSEHMIGGSVHDAEIHWVHLKEGTTDSLLVVGVLFDTSEYGHNVEIQHLWDVL--EIGEETTEEAFVTRAYDVLPSNPTFSHYIGSLTTPPCTEGVKWIVMSDAVVMGEMQLEDFRRSVAFYDDSKVDKQGNTNRPYQPLNGRDVF 519
+V + ++YNLLQ H H PSEH + G E H VH E L VVGVLF+T E N IQHLWD + ++G E T + +A D+LP + +F HY GSLTTPPC EGV W VM ++ + + Q F + + G RP QPLN R++
Sbjct: 111 IVIENKSYNLLQFHFHRPSEHTVKGRKFTMEAHLVHATEDM--QLAVVGVLFETGE--ENSFIQHLWDNIPNQVGTERTIVGQI-QALDLLPEDRSFLHYAGSLTTPPCIEGVSWYVMKSSLEVSKAQANTFEKII-----------GRNARPVQPLNDREIM 257
BLAST of mRNA_S-dermatodea_contig10765.519.1 vs. uniprot
Match: A0A450XNX8_9GAMM (Carbonic anhydrase n=1 Tax=Candidatus Kentron sp. MB TaxID=2138164 RepID=A0A450XNX8_9GAMM) HSP 1 Score: 117 bits (293), Expect = 2.880e-29 Identity = 64/164 (39.02%), Postives = 95/164 (57.93%), Query Frame = 1
Query: 37 LVFDGETYNLLQIHIHSPSEHMIGGSVHDAEIHWVHLKEGTTDSLLVVGVLFDTSEYGHNVEIQHLWDVL--EIGEET-TEEAFVTRAYDVLPSNPTFSHYIGSLTTPPCTEGVKWIVMSDAVVMGEMQLEDFRRSVAFYDDSKVDKQGNTNRPYQPLNGRDVF 519
L+ DG+ Y LLQ+H H+PSEH IGG + E+H VH + L V+G++ + + N I+ +W+ + ++ +ET + E F +LP + TF +Y+GSLTTPPC+EGV+W VM + E Q+ F R + G +NRP QPLNGR +F
Sbjct: 102 LLVDGKPYKLLQLHFHTPSEHQIGGKLASMELHLVH--QNADKELAVIGIMIEEGK--ENKAIKGIWEKMPKKVAKETESHETF--NVASLLPKDKTFFYYMGSLTTPPCSEGVRWFVMKTPIHFSEEQIRKFHRII-----------GVSNRPLQPLNGRTIF 248
BLAST of mRNA_S-dermatodea_contig10765.519.1 vs. uniprot
Match: A0A2R3P8T9_9BACT (Carbonic anhydrase n=2 Tax=Bacteria TaxID=2 RepID=A0A2R3P8T9_9BACT) HSP 1 Score: 116 bits (290), Expect = 6.840e-29 Identity = 65/163 (39.88%), Postives = 94/163 (57.67%), Query Frame = 1
Query: 34 HLVFDGETYNLLQIHIHSPSEHMIGGSVHDAEIHWVHL-KEGTTDSLLVVGVLFDTSEYGHNVEIQHLWDVLEIGEETTEEAFVTRAYDVLPSNPTFSHYIGSLTTPPCTEGVKWIVMSDAVVMGEMQLEDFRRSVAFYDDSKVDKQGNTNRPYQPLNGRDVF 519
+++ DG + L Q H H+PSEH I G + E H+VH K+G +L V+GV+F E N I+ +W+ L +T + A AYD+LP + Y GSLTTPPC+EGV+WIVM + + + + Q+E FR+ + G+TNRP QPLN R +
Sbjct: 94 YIIVDGIRFELKQFHFHAPSEHTIKGKSYPFEAHFVHADKDG---NLAVIGVIF--KEGKKNPIIEKIWENLPEAGKTIKLAHKINAYDLLPKKKKYYRYSGSLTTPPCSEGVRWIVMEEEMELSKEQIEKFRKLMG----------GDTNRPVQPLNARMIM 241
BLAST of mRNA_S-dermatodea_contig10765.519.1 vs. uniprot
Match: UPI00190A542D (carbonic anhydrase family protein n=1 Tax=Persephonella atlantica TaxID=2699429 RepID=UPI00190A542D) HSP 1 Score: 114 bits (285), Expect = 3.620e-28 Identity = 65/163 (39.88%), Postives = 92/163 (56.44%), Query Frame = 1
Query: 34 HLVFDGETYNLLQIHIHSPSEHMIGGSVHDAEIHWVHL-KEGTTDSLLVVGVLFDTSEYGHNVEIQHLWDVLEIGEETTEEAFVTRAYDVLPSNPTFSHYIGSLTTPPCTEGVKWIVMSDAVVMGEMQLEDFRRSVAFYDDSKVDKQGNTNRPYQPLNGRDVF 519
++V DG + L Q H H+PSEH + G + E H+VH K+G +L V+GVLF E N I+ +W L +T + A AYD+LP + Y GSLTTPPC+EGV+WIVM + + + + Q++ FR + G+TNRP QPLN R +
Sbjct: 92 YIVVDGIRFELKQFHFHAPSEHKVKGKSYPFEAHFVHADKDG---NLAVIGVLF--KEGKKNPVIEKIWKNLPETGKTVKLAHKVNAYDLLPEEKKYYRYSGSLTTPPCSEGVRWIVMKEEMELSKEQIQKFRELMG----------GDTNRPVQPLNARMIL 239 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10765.519.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10765.519.1 >prot_S-dermatodea_contig10765.519.1 ID=prot_S-dermatodea_contig10765.519.1|Name=mRNA_S-dermatodea_contig10765.519.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=178bp QVKFDKCSDTPHLVFDGETYNLLQIHIHSPSEHMIGGSVHDAEIHWVHLKback to top mRNA from alignment at S-dermatodea_contig10765:5318..7834- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10765.519.1 ID=mRNA_S-dermatodea_contig10765.519.1|Name=mRNA_S-dermatodea_contig10765.519.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2517bp|location=Sequence derived from alignment at S-dermatodea_contig10765:5318..7834- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10765:5318..7834- >mRNA_S-dermatodea_contig10765.519.1 ID=mRNA_S-dermatodea_contig10765.519.1|Name=mRNA_S-dermatodea_contig10765.519.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1068bp|location=Sequence derived from alignment at S-dermatodea_contig10765:5318..7834- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |