mRNA_S-dermatodea_contig1074.506.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig1074.506.1 vs. uniprot
Match: A0A7S3XZ48_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZ48_HETAK) HSP 1 Score: 169 bits (428), Expect = 2.970e-52 Identity = 76/107 (71.03%), Postives = 92/107 (85.98%), Query Frame = 1
Query: 16 VEDIFSYARHNRVDDLERMMDQGVSVNVRDGHGNTVLIVACQNGHKRALKAALRRGANPNAVNNRGNSALHFCYAFGYGETLGRYLMEKGADSSIRNRSGLVCYDGI 336
+ED+FSYARHNRVDDLER++D G+ VN+RD +GNTVL VACQNGHKRA KAALRRGA+ NA N RGN+ LHFC+ +GYGETLG+YL+ KGAD +IRN G+ CY+GI
Sbjct: 16 LEDVFSYARHNRVDDLERLLDAGMPVNIRDQYGNTVLCVACQNGHKRAAKAALRRGADINARNYRGNTPLHFCFTYGYGETLGQYLISKGADPTIRNNDGVTCYEGI 122
BLAST of mRNA_S-dermatodea_contig1074.506.1 vs. uniprot
Match: A0A7S2MBB0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MBB0_9STRA) HSP 1 Score: 165 bits (418), Expect = 2.350e-49 Identity = 72/108 (66.67%), Postives = 92/108 (85.19%), Query Frame = 1
Query: 16 VEDIFSYARHNRVDDLERMMDQGVSVNVRDGHGNTVLIVACQNGHKRALKAALRRGANPNAVNNRGNSALHFCYAFGYGETLGRYLMEKGADSSIRNRSGLVCYDGIG 339
VEDIFSYARHNR +D+ER++DQG+ VN+RD GNT+L ++CQNG+KR KAALRRGAN NA N RGN+ LHFCY +GYG+TLG+YL+ KG D+SI NR+GL C++G+G
Sbjct: 120 VEDIFSYARHNRFEDIERLLDQGIPVNIRDKTGNTILAISCQNGNKRVAKAALRRGANINAQNYRGNTPLHFCYTYGYGDTLGQYLISKGGDTSILNRAGLTCFEGLG 227
BLAST of mRNA_S-dermatodea_contig1074.506.1 vs. uniprot
Match: A0A2D4BHZ8_PYTIN (Proteasome subunit alpha, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BHZ8_PYTIN) HSP 1 Score: 160 bits (405), Expect = 3.040e-45 Identity = 72/105 (68.57%), Postives = 88/105 (83.81%), Query Frame = 1
Query: 22 DIFSYARHNRVDDLERMMDQGVSVNVRDGHGNTVLIVACQNGHKRALKAALRRGANPNAVNNRGNSALHFCYAFGYGETLGRYLMEKGADSSIRNRSGLVCYDGI 336
D+FS ARHNRVD + M+DQGVSVN RD HGNT+L +ACQNG KR K ALRRGAN N+ NNRGN+ALHFC+A+GYG+TLG YL+ KGAD++I N +GL+C+DGI
Sbjct: 318 DVFSAARHNRVDSVAYMLDQGVSVNARDAHGNTILSIACQNGLKRMAKLALRRGANINSQNNRGNTALHFCFAYGYGDTLGEYLLSKGADATIANDAGLLCFDGI 422
BLAST of mRNA_S-dermatodea_contig1074.506.1 vs. uniprot
Match: A0A8K1FJV6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJV6_PYTOL) HSP 1 Score: 147 bits (371), Expect = 4.240e-42 Identity = 66/105 (62.86%), Postives = 82/105 (78.10%), Query Frame = 1
Query: 22 DIFSYARHNRVDDLERMMDQGVSVNVRDGHGNTVLIVACQNGHKRALKAALRRGANPNAVNNRGNSALHFCYAFGYGETLGRYLMEKGADSSIRNRSGLVCYDGI 336
D+FS ARHNR+D + M+DQG+SVN +D HGNT+L +ACQNG KR K ALRRGAN N GN+ALHFC+A+GYG++LG YL+ KGAD+ I N GLVCY+GI
Sbjct: 128 DVFSAARHNRIDSVTYMLDQGISVNSKDAHGNTILSIACQNGLKRMAKLALRRGANINXXXXXGNTALHFCFAYGYGDSLGEYLISKGADTRIGNDDGLVCYEGI 232
BLAST of mRNA_S-dermatodea_contig1074.506.1 vs. uniprot
Match: G4Z035_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4Z035_PHYSP) HSP 1 Score: 145 bits (367), Expect = 8.500e-42 Identity = 68/105 (64.76%), Postives = 83/105 (79.05%), Query Frame = 1
Query: 22 DIFSYARHNRVDDLERMMDQGVSVNVRDGHGNTVLIVACQNGHKRALKAALRRGANPNAVNNRGNSALHFCYAFGYGETLGRYLMEKGADSSIRNRSGLVCYDGI 336
D+FS ARHNR D + M+DQGV VN RD GNT+L +ACQNG KR K ALRRGAN N+ NNRGN+ALHFC+++GYG++LG YL+ KGAD++I N GLVCY GI
Sbjct: 103 DLFSAARHNRYDSVVYMLDQGVPVNSRDQFGNTLLSIACQNGLKRIAKLALRRGANINSQNNRGNTALHFCFSYGYGDSLGAYLISKGADTTIENDDGLVCYYGI 207
BLAST of mRNA_S-dermatodea_contig1074.506.1 vs. uniprot
Match: A0A485KLK5_9STRA (Aste57867_8880 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KLK5_9STRA) HSP 1 Score: 147 bits (370), Expect = 8.540e-42 Identity = 67/105 (63.81%), Postives = 82/105 (78.10%), Query Frame = 1
Query: 22 DIFSYARHNRVDDLERMMDQGVSVNVRDGHGNTVLIVACQNGHKRALKAALRRGANPNAVNNRGNSALHFCYAFGYGETLGRYLMEKGADSSIRNRSGLVCYDGI 336
D+FS ARHNRVDD+ M+D G+ VN++D +GN++L++ACQNG KR K LRRGAN NA N RGN+ LHFCYA+GYGETLG YL+ KGAD +IRN L CY GI
Sbjct: 141 DVFSLARHNRVDDVRDMLDSGLPVNIQDAYGNSLLLIACQNGLKRLAKELLRRGANINAQNTRGNTPLHFCYAYGYGETLGAYLISKGADVTIRNGQDLECYYGI 245
BLAST of mRNA_S-dermatodea_contig1074.506.1 vs. uniprot
Match: A0A0W8D3U4_PHYNI (Histone-lysine N-methyltransferase n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D3U4_PHYNI) HSP 1 Score: 145 bits (365), Expect = 1.110e-41 Identity = 67/105 (63.81%), Postives = 82/105 (78.10%), Query Frame = 1
Query: 22 DIFSYARHNRVDDLERMMDQGVSVNVRDGHGNTVLIVACQNGHKRALKAALRRGANPNAVNNRGNSALHFCYAFGYGETLGRYLMEKGADSSIRNRSGLVCYDGI 336
D+FS ARHN D + M+DQGV VN RD GNT+L +ACQNG KR K ALRRGAN N+ NNRGN+ALHFC+A+GYG++LG YL+ KGAD++I N G+VCY GI
Sbjct: 84 DLFSAARHNHYDSVIYMLDQGVPVNSRDAFGNTLLTIACQNGLKRITKLALRRGANINSQNNRGNTALHFCFAYGYGDSLGAYLISKGADTTIENDDGMVCYYGI 188
BLAST of mRNA_S-dermatodea_contig1074.506.1 vs. uniprot
Match: H3GFG3_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GFG3_PHYRM) HSP 1 Score: 145 bits (365), Expect = 2.900e-41 Identity = 67/105 (63.81%), Postives = 81/105 (77.14%), Query Frame = 1
Query: 22 DIFSYARHNRVDDLERMMDQGVSVNVRDGHGNTVLIVACQNGHKRALKAALRRGANPNAVNNRGNSALHFCYAFGYGETLGRYLMEKGADSSIRNRSGLVCYDGI 336
D+FS RHNR D + M+DQGV VN RD GNT+L +ACQNG KR K ALRRGAN N NNRGN+ALHFC+A+GYG++LG YL+ KGAD++I N G+VCY GI
Sbjct: 122 DLFSATRHNRFDSVTYMLDQGVPVNSRDAFGNTLLSIACQNGLKRIAKLALRRGANINCQNNRGNTALHFCFAYGYGDSLGAYLISKGADTTIENDDGVVCYYGI 226
BLAST of mRNA_S-dermatodea_contig1074.506.1 vs. uniprot
Match: D0NFS1_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NFS1_PHYIT) HSP 1 Score: 143 bits (361), Expect = 5.630e-41 Identity = 67/105 (63.81%), Postives = 81/105 (77.14%), Query Frame = 1
Query: 22 DIFSYARHNRVDDLERMMDQGVSVNVRDGHGNTVLIVACQNGHKRALKAALRRGANPNAVNNRGNSALHFCYAFGYGETLGRYLMEKGADSSIRNRSGLVCYDGI 336
D+FS ARHN D + M+D VSVN RD GNT+L +ACQNG KR K ALRRGAN N+ NNRGN+ALHFC+A+GYG++LG YL+ KGAD++I N GLVCY GI
Sbjct: 96 DLFSAARHNHYDSVVYMLDNSVSVNSRDAFGNTLLSIACQNGLKRITKLALRRGANINSQNNRGNTALHFCFAYGYGDSLGAYLISKGADTTIENDDGLVCYYGI 200
BLAST of mRNA_S-dermatodea_contig1074.506.1 vs. uniprot
Match: W2H644_PHYPR (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2H644_PHYPR) HSP 1 Score: 145 bits (365), Expect = 7.360e-41 Identity = 67/105 (63.81%), Postives = 82/105 (78.10%), Query Frame = 1
Query: 22 DIFSYARHNRVDDLERMMDQGVSVNVRDGHGNTVLIVACQNGHKRALKAALRRGANPNAVNNRGNSALHFCYAFGYGETLGRYLMEKGADSSIRNRSGLVCYDGI 336
D+FS ARHN D + M+DQGV VN RD GNT+L +ACQNG KR K ALRRGAN N+ NNRGN+ALHFC+A+GYG++LG YL+ KGAD++I N G+VCY GI
Sbjct: 157 DLFSAARHNHYDSVIYMLDQGVPVNSRDAFGNTLLTIACQNGLKRITKLALRRGANINSQNNRGNTALHFCFAYGYGDSLGAYLISKGADTTIENDDGMVCYYGI 261 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1074.506.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1074.506.1 >prot_S-dermatodea_contig1074.506.1 ID=prot_S-dermatodea_contig1074.506.1|Name=mRNA_S-dermatodea_contig1074.506.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=115bp FRQNQVEDIFSYARHNRVDDLERMMDQGVSVNVRDGHGNTVLIVACQNGHback to top mRNA from alignment at S-dermatodea_contig1074:21421..22983- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig1074.506.1 ID=mRNA_S-dermatodea_contig1074.506.1|Name=mRNA_S-dermatodea_contig1074.506.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1563bp|location=Sequence derived from alignment at S-dermatodea_contig1074:21421..22983- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig1074:21421..22983- >mRNA_S-dermatodea_contig1074.506.1 ID=mRNA_S-dermatodea_contig1074.506.1|Name=mRNA_S-dermatodea_contig1074.506.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=690bp|location=Sequence derived from alignment at S-dermatodea_contig1074:21421..22983- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |