mRNA_S-dermatodea_contig1073.498.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig1073.498.1
Unique NamemRNA_S-dermatodea_contig1073.498.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig1073.498.1 vs. uniprot
Match: D7FKX1_ECTSI (MTS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKX1_ECTSI)

HSP 1 Score: 341 bits (875), Expect = 2.600e-111
Identity = 176/226 (77.88%), Postives = 197/226 (87.17%), Query Frame = 3
Query:   63 MKLKHLESALQSVTRYSDLGPDNVDIDLEQYSTSAHLAARMAYTAEFEFGDIEDRTVLDLGCGTGMLGIAAGMLGASAVVGLDMSEVGLAAAAENAKKMDVELDLVRCDVARNPCVPERYDTVLMNPPFGTRRAGIDVIFLERALEAATTAVYSMHKSSTRKHLLKKAQEWDVDVAVLAQLRFDIPATYKFHKRNSVDVEVDLIRFQKRSPHSDS---DSDVPVKG 731
            MKLKHLES LQSVT YS+LG + V+I+LEQYSTSAHLAARM YTAEFEFGDIEDR+VLDLGCGTGMLGIAAG+LGA AVVGLD+    L+AAAENA+ M++ +D V CDVARNPC+PER+DTVLMNPPFGTRRAGIDV+FLERALEAA T VYSMHK+STRKHLLKKA+EW VD+ VLAQLRFDIPATYKFHKR S+DVEVDLIR QKR   SDS   +S +  KG
Sbjct:    1 MKLKHLESHLQSVTTYSELGAEKVNIELEQYSTSAHLAARMVYTAEFEFGDIEDRSVLDLGCGTGMLGIAAGILGAGAVVGLDVDSGALSAAAENAESMEIGMDFVCCDVARNPCIPERFDTVLMNPPFGTRRAGIDVVFLERALEAAPT-VYSMHKTSTRKHLLKKAEEWGVDITVLAQLRFDIPATYKFHKRRSMDVEVDLIRLQKRLSRSDSCSTESGLDAKG 225          
BLAST of mRNA_S-dermatodea_contig1073.498.1 vs. uniprot
Match: A0A835Z882_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z882_9STRA)

HSP 1 Score: 219 bits (559), Expect = 2.030e-64
Identity = 126/216 (58.33%), Postives = 149/216 (68.98%), Query Frame = 3
Query:   63 MKLKHLESALQSVTRYS---DLGPDNVDIDLEQYSTSAHLAARMAYTAEFEFGDIEDRTVLDLGCGTGMLGIAAGMLGASAVVGLDMSEVGLAAAAENAKKMDVELDLVRCDVARNPCVPERYDTVLMNPPFGTRRAGIDVIFLERALEAATTAVYSMHKSSTRKHLLKKAQEWDVDVAVLAQLRFDIPATYKFHKRNSVDVEVDLIRFQKRSPHS 701
            MKLKHLESALQ VT YS   +L      ++LEQYSTS HLAARM YTA  E  DIED  VLD+GCGTG+LGIAA  LGA  V G+D+    LA AA+NA++ +V+  L   D+A  P     +DTVL NPPFGTRRAG D+ FL  A+  A  AVY+MHK+STR H+LK A+E   +  V+AQL FDIPATY  HKR SVDVEVDLIR    +P S
Sbjct:    1 MKLKHLESALQEVTLYSQLQELTGTAPRLELEQYSTSPHLAARMVYTAHMEHDDIEDMNVLDMGCGTGILGIAAAFLGAGHVTGIDIDPAALAVAAQNAERCEVQETL---DLAEAP----PFDTVLTNPPFGTRRAGADIEFLRLAMSLARRAVYTMHKTSTRAHVLKCAREGGAEAEVIAQLCFDIPATYAHHKRKSVDVEVDLIRVAIAAPAS 209          
BLAST of mRNA_S-dermatodea_contig1073.498.1 vs. uniprot
Match: A0A4P9XQ30_9FUNG (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XQ30_9FUNG)

HSP 1 Score: 219 bits (558), Expect = 2.670e-64
Identity = 113/214 (52.80%), Postives = 160/214 (74.77%), Query Frame = 3
Query:   63 MKLKHLESALQSVTRYSDLGPDNVDIDLEQYSTSAHLAARMAYTAEFEFGDIEDRTVLDLGCGTGMLGIAAGMLGASAVVGLDMSEVGLAAAAENAKKMDVELDLVRCDVARNPCVPER---YDTVLMNPPFGTR-RAGIDVIFLERALEAATTAVYSMHKSSTRKHLLKKAQEWDVDVAVLAQLRFDIPATYKFHKRNSVDVEVDLIRFQKRS 692
            MKLK LES LQSV  +++       I  EQY T  HLAA++ YTA   + DIED+ V D+GCG G+LGIAAGMLGA  ++GLD+ +  +  A +NA++ ++E+D +R +VA +  +P R    DTVLMNPPFGT+ R G+D++FL++ +E A  AVYS+HK+STR+H+LKKA+EW V+  VLA+++F++PA YKFHK+ SVD+EVDL+RF+KR+
Sbjct:    1 MKLKQLESHLQSVEVFAE-----PKIIYEQYPTRPHLAAQILYTAHTVYDDIEDKVVADIGCGCGVLGIAAGMLGAGHLIGLDIDQDAIDIAQQNAEEQEIEIDFIRTNVA-DDALPIRSGYVDTVLMNPPFGTKTRPGVDMLFLKKGIELANCAVYSLHKTSTREHILKKAEEWGVECKVLAEMKFEVPAMYKFHKKKSVDIEVDLLRFEKRA 208          
BLAST of mRNA_S-dermatodea_contig1073.498.1 vs. uniprot
Match: A0A4P9Z2R6_9FUNG (Methyltransferase-like protein 5 n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9Z2R6_9FUNG)

HSP 1 Score: 212 bits (540), Expect = 1.000e-61
Identity = 112/212 (52.83%), Postives = 152/212 (71.70%), Query Frame = 3
Query:   63 MKLKHLESALQSVTRYSDLGPDNVDIDLEQYSTSAHLAARMAYTAEFEFGDIEDRTVLDLGCGTGMLGIAAGMLGASAVVGLDMSEVGLAAAAENAKKMDVELDLVRCDVARNPCVPER---YDTVLMNPPFGTR-RAGIDVIFLERALEAATTAVYSMHKSSTRKHLLKKAQEWDVDVAVLAQLRFDIPATYKFHKRNSVDVEVDLIRFQK 686
            MKLK LES LQ V  +            EQY T AHLAA++ YTA   + D+ED+ V DLGCG G+L IAAGMLGA  V+G+D+ +  +  A  NA++ ++E+D VR ++A +  +P R    DTVLMNPPFGT+ R G+D++FL + +E A  AVYS+HK+STR+H+LKKA+EW+V   VLA+L+FD+PA YKFHK+ SVD+EVDL+RF+K
Sbjct:    1 MKLKQLESYLQDVAVFD-----------EQYPTRAHLAAQILYTAHSVYDDVEDKVVADLGCGCGVLSIAAGMLGAGHVIGVDIDQDAIDIAQRNAEEQEIEMDFVRSNIA-DDALPIRAGYVDTVLMNPPFGTKTRPGVDMLFLRQGIELARHAVYSLHKTSTREHILKKAKEWNVHCDVLAELKFDVPAMYKFHKKKSVDIEVDLLRFEK 200          
BLAST of mRNA_S-dermatodea_contig1073.498.1 vs. uniprot
Match: A0A851TX84_9PASS (METL5 protein (Fragment) n=2 Tax=Passeriformes TaxID=9126 RepID=A0A851TX84_9PASS)

HSP 1 Score: 207 bits (527), Expect = 1.110e-59
Identity = 109/213 (51.17%), Postives = 149/213 (69.95%), Query Frame = 3
Query:   60 RMKLKHLESALQSVTRYSDLGPDNVDIDLEQYSTSAHLAARMAYTAEFEFGDIEDRTVLDLGCGTGMLGIAAGMLGASAVVGLDMSEVGLAAAAENAKKMDV-ELDLVRCDVAR-NPCVPERYDTVLMNPPFGTRR-AGIDVIFLERALEAATTAVYSMHKSSTRKHLLKKAQEWDVDVAVLAQLRFDIPATYKFHKRNSVDVEVDLIRFQKR 689
            ++KLK LES LQ V  +     +N  + LEQY T  H+AA M YT    F DIE++T+ DLGCG GML I + MLGA   VGLD+    L     N +  ++  +++V+CD+   + C+P+ +DTV+MNPPFGT+   GID+IFL+ AL+ A TAVYS+HK+STR+H+ KKA EW+V + VLA+LRFD+PA+YKFHK+ SVD+EVD IRF  +
Sbjct:    3 KLKLKELESCLQQVDTF-----ENPKLLLEQYPTRPHIAACMLYTIHNTFDDIENKTIADLGCGCGMLSIGSAMLGAGFCVGLDIDADALEIFNSNIEDFELTNVNMVQCDICSLSDCMPDTFDTVIMNPPFGTKHNKGIDMIFLKTALQMAKTAVYSLHKTSTRQHIEKKAAEWEVKMEVLAELRFDLPASYKFHKKKSVDIEVDFIRFSAK 210          
BLAST of mRNA_S-dermatodea_contig1073.498.1 vs. uniprot
Match: A0A1X2GST0_9FUNG (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GST0_9FUNG)

HSP 1 Score: 207 bits (526), Expect = 1.280e-59
Identity = 106/212 (50.00%), Postives = 147/212 (69.34%), Query Frame = 3
Query:   63 MKLKHLESALQSVTRYSDLGPDNVDIDLEQYSTSAHLAARMAYTAEFEFGDIEDRTVLDLGCGTGMLGIAAGMLGASAVVGLDMSEVGLAAAAENAKKMDVELDLVRCDVARNPCVPERY----DTVLMNPPFGTRRAGIDVIFLERALEAATTAVYSMHKSSTRKHLLKKAQEWDVDVAVLAQLRFDIPATYKFHKRNSVDVEVDLIRFQK 686
            MKLK LES LQ    +SD       I  EQY T+AHLAARM YTA+  + DIED+ V DLG G G+L IAA +LGA   VG D+    +A A EN ++ + E+D V  D++ + C  +R+    DT++MNPPFGT+  G+D++ L++A+E A  AVYS+HK+STR+H+LKKA+EW V+  V+A+++FD+P  YKFHK+ SVD+ VD +RF K
Sbjct:    1 MKLKELESILQDCEVFSD-----PKIQFEQYPTTAHLAARMLYTADTVYDDIEDKAVGDLGSGCGILSIAACILGAGYNVGFDIDPDAVAIARENCEEFETEVDFVLTDLSADVCALDRFKGRLDTIIMNPPFGTKNKGVDMVLLKKAVETANRAVYSLHKTSTREHILKKAKEWGVECEVIAEMKFDVPMMYKFHKKKSVDIAVDFLRFGK 207          
BLAST of mRNA_S-dermatodea_contig1073.498.1 vs. uniprot
Match: A0A7S1CC87_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CC87_9STRA)

HSP 1 Score: 209 bits (532), Expect = 2.510e-59
Identity = 111/210 (52.86%), Postives = 147/210 (70.00%), Query Frame = 3
Query:   63 MKLKHLESALQSVTRYSDLGPDNVDIDLEQYSTSAHLAARMAYTAEFEFGDIEDRTVLDLGCGTGMLGIAAGMLGASAVVGLDMSEVGLAAAAENAKKMDVELDLVRCDVARNPCVPER---YDTVLMNPPFGTRRAGIDVIFLERALEAATTAVYSMHKSSTRKHLLKKAQ-EWDVDVAVLAQLRFDIPATYKFHKRNSVDVEVDLIRF 680
            MKLK L SALQ V R+++       I+LEQY+TSA LAA M YT E  FGDIE + V D GCGTG+L I A +LGA+  +G+DM    LA AA N  + ++++DLVR ++     +P R    DTV+MNPPFGTR  G+D++F+ RAL+ A+TAVYS+HK+STR H+++KA  EW V+  VLA++RFD+P  Y FHK+ S DVEVD  RF
Sbjct:   37 MKLKELSSALQGVERFTE-----PKIELEQYNTSATLAANMLYTIESAFGDIEGKVVADFGCGTGVLAIGAEILGAAHTIGVDMDADALALAAGNLAEYELDIDLVRANIGGEDPLPIRRGLVDTVIMNPPFGTRVKGVDLVFVRRALDVASTAVYSLHKTSTRAHIMRKATTEWGVEAQVLAEMRFDVPKLYSFHKKKSADVEVDFWRF 241          
BLAST of mRNA_S-dermatodea_contig1073.498.1 vs. uniprot
Match: A0A8H7VJV9_9FUNG (Uncharacterized protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7VJV9_9FUNG)

HSP 1 Score: 206 bits (524), Expect = 2.510e-59
Identity = 106/211 (50.24%), Postives = 145/211 (68.72%), Query Frame = 3
Query:   63 MKLKHLESALQSVTRYSDLGPDNVDIDLEQYSTSAHLAARMAYTAEFEFGDIEDRTVLDLGCGTGMLGIAAGMLGASAVVGLDMSEVGLAAAAENAKKMDVELDLVRCDVAR--NPCVPERYDTVLMNPPFGTRRAGIDVIFLERALEAATTAVYSMHKSSTRKHLLKKAQEWDVDVAVLAQLRFDIPATYKFHKRNSVDVEVDLIRFQKR 689
            MKLK LES LQ    +     DN  I  EQY T+AHLAARM YTA+  + DIED+ V D G G G+L IAA +LGA   VG D+    +  A ENA+  +V++D +  D+ +  N      +DT++MNPPFGT+  GID++FL++A+E A TAVYS+HK+STR+H+ KKA+EW VD  V+A+++FD+P  YKFHK+ SVD+ VD +RF K+
Sbjct:    1 MKLKELESILQDCEVF-----DNPKIQYEQYPTTAHLAARMLYTADTVYDDIEDKVVADFGSGCGILSIAANILGAGYSVGFDIDPDAIRIARENAEGFEVDIDFILTDLGQDNNKFDKFHFDTIVMNPPFGTKTKGIDMVFLKKAVELAGTAVYSLHKTSTREHIRKKAKEWGVDFEVVAEMKFDVPMMYKFHKKKSVDIAVDFLRFSKK 206          
BLAST of mRNA_S-dermatodea_contig1073.498.1 vs. uniprot
Match: A0A1X2HK13_SYNRA (Methyltransferase-like protein 5-like protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HK13_SYNRA)

HSP 1 Score: 204 bits (520), Expect = 9.070e-59
Identity = 105/211 (49.76%), Postives = 145/211 (68.72%), Query Frame = 3
Query:   63 MKLKHLESALQSVTRYSDLGPDNVDIDLEQYSTSAHLAARMAYTAEFEFGDIEDRTVLDLGCGTGMLGIAAGMLGASAVVGLDMSEVGLAAAAENAKKMDVELDLVRCDV--ARNPCVPERYDTVLMNPPFGTRRAGIDVIFLERALEAATTAVYSMHKSSTRKHLLKKAQEWDVDVAVLAQLRFDIPATYKFHKRNSVDVEVDLIRFQKR 689
            MKL+ LES LQ    +     D+  I  EQY T+ HLAARM YTA+  + DIED+ V D GCG G+L IAA +LGA   VG D+    +  A  NA+  +++LD+V  ++  A       R DT++MNPPFGT+  G+D++FL++A+E A TAVYS+HK+STR H+LKKA+EW+VD  V+A+++FD+P  YKFHK+ SVD+ VD +RF KR
Sbjct:    1 MKLRELESLLQDCDVF-----DDPKIQYEQYPTTPHLAARMLYTADTVYDDIEDKAVADFGCGCGILSIAANILGAGYSVGFDIDPDAIEIARSNAETFEIDLDIVLTNLESAGLDRFKGRIDTIVMNPPFGTKNKGVDMVFLKKAIELAGTAVYSLHKTSTRDHILKKAKEWNVDCEVIAEMKFDVPMMYKFHKKKSVDIAVDFLRFGKR 206          
BLAST of mRNA_S-dermatodea_contig1073.498.1 vs. uniprot
Match: A0A7S2XW28_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW28_9STRA)

HSP 1 Score: 204 bits (520), Expect = 1.250e-58
Identity = 116/220 (52.73%), Postives = 152/220 (69.09%), Query Frame = 3
Query:   63 MKLKHLESALQSVTRYSDLGPDNVDIDLEQYSTSAHLAARMAYTAEFEFGDIEDRTVLDLGCGTGMLGIAAGMLGASAVVGLDMSEVGLAAAAENAKKMDVE--LDLVRCDVAR----------NPCVPERYDTVLMNPPFGTRRAGIDVIFLERALEAATTAVYSMHKSSTRKHLLKKAQEWDVDVAVLAQLRFDIPATYKFHKRNSVDVEVDLIRFQK 686
            MKLK LES L SV  + D       ++LEQY TSAHLA+RM +TA   + DIE ++VLDLG GTGMLGIA+ M+GAS V+G+D+    L+ A  N +++ +E  +DL+  D++           +P     +DTV+MNPPFGTRRAG D+ F++R LE +T AVYS+HKSSTR+ +LKKA EW V V VLA+LRFDIP  YKFHK+ + DV VDL+RF K
Sbjct:    1 MKLKQLESHLSSVIPFQD-----PKVELEQYPTSAHLASRMIFTACNTYDDIEGKSVLDLGTGTGMLGIASVMMGASYVLGIDIDPDALSLARVNLEQIGMEDDMDLLNADLSLPTDEDRICTYSPLRLGSFDTVVMNPPFGTRRAGADMDFVQRGLELSTRAVYSLHKSSTRQFILKKAGEWGVGVEVLAELRFDIPQMYKFHKKKTADVNVDLVRFCK 215          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1073.498.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKX1_ECTSI2.600e-11177.88MTS domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835Z882_9STRA2.030e-6458.33S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A4P9XQ30_9FUNG2.670e-6452.80S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A4P9Z2R6_9FUNG1.000e-6152.83Methyltransferase-like protein 5 n=1 Tax=Syncephal... [more]
A0A851TX84_9PASS1.110e-5951.17METL5 protein (Fragment) n=2 Tax=Passeriformes Tax... [more]
A0A1X2GST0_9FUNG1.280e-5950.00S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A7S1CC87_9STRA2.510e-5952.86Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A8H7VJV9_9FUNG2.510e-5950.24Uncharacterized protein n=1 Tax=Mucor circinatus T... [more]
A0A1X2HK13_SYNRA9.070e-5949.76Methyltransferase-like protein 5-like protein n=1 ... [more]
A0A7S2XW28_9STRA1.250e-5852.73Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1073contigS-dermatodea_contig1073:12467..16645 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score341.3
Seed ortholog evalue3.5e-91
Seed eggNOG ortholog2880.D7FKX1
Preferred nameMETTL5
KEGG koko:K07579
EggNOG free text desc.DNA repair
EggNOG OGsCOG2263@1,KOG3420@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-17_001680.1
Exons5
Model size1811
Cds size681
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924170.8316572-UTR-S-dermatodea_contig1073:12466..125281622924170.8316572-UTR-S-dermatodea_contig1073:12466..12528Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1073 12467..12528 +
1694079066.1609414-UTR-S-dermatodea_contig1073:12466..125281694079066.1609414-UTR-S-dermatodea_contig1073:12466..12528Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1073 12467..12528 +
1622924170.9085581-UTR-S-dermatodea_contig1073:15577..166451622924170.9085581-UTR-S-dermatodea_contig1073:15577..16645Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1073 15578..16645 +
1694079066.2399204-UTR-S-dermatodea_contig1073:15577..166451694079066.2399204-UTR-S-dermatodea_contig1073:15577..16645Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1073 15578..16645 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924170.8444786-CDS-S-dermatodea_contig1073:12528..126231622924170.8444786-CDS-S-dermatodea_contig1073:12528..12623Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1073 12529..12623 +
1694079066.1770635-CDS-S-dermatodea_contig1073:12528..126231694079066.1770635-CDS-S-dermatodea_contig1073:12528..12623Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1073 12529..12623 +
1622924170.8569725-CDS-S-dermatodea_contig1073:13306..135631622924170.8569725-CDS-S-dermatodea_contig1073:13306..13563Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1073 13307..13563 +
1694079066.1858165-CDS-S-dermatodea_contig1073:13306..135631694079066.1858165-CDS-S-dermatodea_contig1073:13306..13563Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1073 13307..13563 +
1622924170.86877-CDS-S-dermatodea_contig1073:13923..140091622924170.86877-CDS-S-dermatodea_contig1073:13923..14009Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1073 13924..14009 +
1694079066.1940336-CDS-S-dermatodea_contig1073:13923..140091694079066.1940336-CDS-S-dermatodea_contig1073:13923..14009Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1073 13924..14009 +
1622924170.8798852-CDS-S-dermatodea_contig1073:14751..147991622924170.8798852-CDS-S-dermatodea_contig1073:14751..14799Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1073 14752..14799 +
1694079066.2026885-CDS-S-dermatodea_contig1073:14751..147991694079066.2026885-CDS-S-dermatodea_contig1073:14751..14799Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1073 14752..14799 +
1622924170.8928592-CDS-S-dermatodea_contig1073:15382..155771622924170.8928592-CDS-S-dermatodea_contig1073:15382..15577Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1073 15383..15577 +
1694079066.2187023-CDS-S-dermatodea_contig1073:15382..155771694079066.2187023-CDS-S-dermatodea_contig1073:15382..15577Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1073 15383..15577 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1073.498.1prot_S-dermatodea_contig1073.498.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig1073 12529..15577 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig1073.498.1

>prot_S-dermatodea_contig1073.498.1 ID=prot_S-dermatodea_contig1073.498.1|Name=mRNA_S-dermatodea_contig1073.498.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=227bp
MKLKHLESALQSVTRYSDLGPDNVDIDLEQYSTSAHLAARMAYTAEFEFG
DIEDRTVLDLGCGTGMLGIAAGMLGASAVVGLDMSEVGLAAAAENAKKMD
VELDLVRCDVARNPCVPERYDTVLMNPPFGTRRAGIDVIFLERALEAATT
AVYSMHKSSTRKHLLKKAQEWDVDVAVLAQLRFDIPATYKFHKRNSVDVE
VDLIRFQKRSPHSDSDSDVPVKGEHN*
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mRNA from alignment at S-dermatodea_contig1073:12467..16645+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig1073.498.1 ID=mRNA_S-dermatodea_contig1073.498.1|Name=mRNA_S-dermatodea_contig1073.498.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4179bp|location=Sequence derived from alignment at S-dermatodea_contig1073:12467..16645+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CCTGTAACCTGTAACAGAGTTCTCGCCGCGCAGCACCGTTGGATGGGCCC GACGAGCTGAGGATGAAGCTAAAGCACCTAGAGTCCGCACTGCAATCAGT GACCCGGTACAGCGACCTGGGTCCCGACAATGTCGATATTGACCTCGAGC AATACAGGTGAACTCTATACATGTAGTAAGCGGTTCGCCCCAATAGATTG CCCGATATCTCGTGTGGTGAAGGAATGCGAGAGACAGAGCTACAGAGTAT ACTCCATAGAGGTCTATACTTGTAGTGGTACAAACTGCATATCCCAACAT GCAACATAGAGCTCTAGAGAGCTAGCTCTACGTTGGCATTCGCACGCTTG ATGGAATCGACGATGTGTTGTGCGCATCGCTTGTAGCATTGGTATTATCG AGGCACTGCGCATAATTCCTGAACGACAGGTTGAACGAGTGCAAACGAGA GCACCCCCACAACCTCAATAAGCGTGTGCAGCTGCTGGTGGCGTGCAGCA GCTGCTGTGCGTTGGATGCACGGCTGCATGCAACCATGCAAGCATGCATG TTGAAGTAGTGCGTTTGCAGTCCAGGTTCTTGCCCACGCTGCGCGCCTGC GACTACGCCTGCGACTGGCCTGCGACCGCACCGGGTTACTTGCAGCGGTC CGCCGCAAGAATTGGCATCGTCGGTGTAACCGCATGTCTGAAACGATCGG AGCCCGGGTTGTGTCGGTTGTCGGTATCCACGCGTTGAGCTAAAACCCAA CCCCTTCATACTGACCTGTAGAGCTCCGCACCTGTCAACTAGCCAACCCT CTTACAGTACCAGTTACCGCATCCCTCGCACCCTCTCCAGCACCTCGGCC CATCTAGCCGCGCGAATGGCGTACACAGCCGAGTTCGAATTCGGCGACAT CGAGGACCGAACCGTCCTTGATCTCGGCTGTGGTACGGGCATGCTGGGGA TCGCCGCAGGAATGCTCGGCGCCAGCGCTGTGGTGGGACTCGACATGTCC GAAGTAGGCCTTGCCGCTGCTGCGGAGAATGCCAAGAAGATGGATGTTGA ACTGGATCTCGTGCGCTGCGACGTCGCGCGGAATCCCTGTGTGCCAGGTG TGGTACAGTAACTATAATAGCGTGTTTCTTGGGAGGCTGTGGGTGGGTTG GGCAAAGTGAATCATTATATAATACTTCGAAGTATATCATAAGTAGTGGC GCACCGCGGGACGTAGTGCTCGCCTCGATAATATTGTAGGAGGTTGGGGC TGCCGTACACGCCTTTTCAAGCGTGCGAACAGAATTTGGGAGAGATCCCC GAGTGTGGTTTTGTTTCTTAAATTGTTGGTTGGGTTGGTGCTCCAAGAGA CGACGACGGGCGGGCCTCAAAAGTATTAACAGCAGTCTAGTCTTGTGACA ACCGCCGCCCCGCCCCCCCACCCCTACCCCCACCCCCCCGCGCACGCCTC CGCACAGAACGGTACGACACGGTGCTGATGAACCCCCCTTTCGGTACGCG AAGAGCGGGCATCGACGTGATATTTCTAGAGCGTGCACTTGAGGTGCGTA CTCTTGCGTTGCCTGGAATATATGCTCGTTCTGTTGCCACTTGGGTGCGA TATATCTGTATGCGAGTCACTACTATATATGATATATACTAATAATACTC TGTATCTCTGAGATGTGTCGGTGACGGATATGGCCAGTTCACCCGTACGG GTCCTGTTCGAAGGCCAGGGTGTGGAGGTGGCGGGGCTGATGGCCTCCGT ACACTTGTAGCGAAACAAGGAGGCAGCTATTCCAGATTCTGGCTCGCAGT ACGTGCCGCTTTGGAGCTGGCCGTAGTTCAATAAGGACCTGGTGGAGCGG CGAGGGAGCAATGTCCGATTCCGATTCCTGTTCTGACGTTTTCCATACAT ATCTGGTGGTTTGTGTGTCTCCTCTCTTTTGCTAAGACGTACCAGAGCGA CGATATTTTGTGTGGTAGAAGTAGAGTTCTGCGTATTTTCTCCGGGACTC TTTGCGCATCTGACCACAAGTCGGATCGGACTAAGCCGATCGGCTATACG TACGTAAATCAACCAACCAATCAACCAATCAAATCAGTACCATCCAAGTA GCGTGCTCTTCAAGCATAGAGGAAGGTGAGCTGGGAAGACGACCTGTCTC CTGGTATTACTCTGAAGTTTAATCTCGGATGGGTATGGTACACGATGCAG GGAGCAATTTTGTTAACCATTTTTCGCCTAACAACTAACTGCCGTCGTGC CCTCCACGAATCCGGTACGACTTACCCTCAACCAGGCCGCGACGACGGCG GTGTACTCCATGCACAAATCGTCCACGCGAAAAGTGAGTCAACACCTGAA GCGCGTAGCCACTACTGTATAACATGTTATACGAGCCAGTACTCCAATAA CCGACATCGCTGGAACAACAACGGCGCGAAGTACCAAATTTAGAACGTAC ATTGTTCGATTCCGAGTAATCTACTATCAATAGCGTTTTTTCTACAACTG CAGTATGTAAATCTGGGGTACTATATGTAAATCTGGGGTACTGTACTATA TGTAAATCTGGGGTACTATTTCTTCTTTCTGGTACCATATAGTAAGTGCC AGGGACGGTACGGTGTATCGTAGAAGTAGAATTCTGATTATTAATAGTTA CTTTCTCCTTGACTCTTTGCGCATCTGAGCACAAGTCAGATACTGGTAGG TCGGATGAACCCGATTCGGCTATTCGTGTGCAAATCAATGAATCAATGAA AAGTCAGGACTCCACCCTTAAGCCCGACGTGACACGATATTGCCCAGCCC CGCTTGCAAATCCCTTGCCCGACGTTTGCAGTTGTTCCCTCAAATCCTCG TTATCTTGCTTCTCGTGATCTGTTCCGGCTACCCCTCACGACGTGTTGTC CCTTATCCCACGACAGCATCTGCTCAAGAAAGCGCAGGAGTGGGATGTGG ATGTTGCTGTTCTGGCACAGCTGCGCTTCGATATTCCCGCCACGTACAAG TTCCACAAGCGCAATTCGGTGGATGTGGAGGTCGACCTGATTCGATTTCA GAAACGCTCCCCGCATTCCGATTCCGACAGCGACGTGCCGGTCAAAGGGG AGCACAACTAACGCACCTGCGGGCGTGTGCTTGATTTTCGAGGTCCTTGA TCAACCGCTACAAAATATCACTATGATATAATACATAAGTGTCTTCTTTT TCAGCTTTTTTTTCTCTCCGTGCACGCCGTCGTAATATTTTGGTATCTAT GGCTTCAATATAGTAATAGTAGTTCATGTCGTATAATACTTGAACAACTT GTGGAGTCTTCGGTTTCACTTGAACGGCCCAATCCGACTTGTGAAAAAAA AATGAAGCGACGTAGGCGCGTGCGTACGAGACTGACTTACGTCTAATATG ATGCTAGCACTGCCGCCGCGGATTTACGTCTTCGGTCATGTCGCCGTTCG CGGCAGCCATCTGTTGAGGATGAGGCAGGGGAATCATCATCATCGTATTG TATACGGTACAAGCTTTGTACACCAGTATGCATTTCGATTGAAAGGGTCA GAAATGCCGGGAAAGAAGCTGGTTCGCCAGATGATGGACATGTAGTTATA TGTATACTTCGAACTATATAACGTAGTAGGTACCTGGTGTAGTAGTAGTA GTTAGAGTATATACTATAAAAGTGGTGATTGCTGCTTCAGGAACCAGAGT ACTGTATGCATTTTGATTGAAGGGGTCAGAAATGACGGGAAAGGTGGTTC GCCAGATGATGGACAGGTAGTTATATGTATATATCACGTAGTAGGTGTAG TATTTAGAGTATATAATAGTAAAGTGGTGATTGCTGCTTCAGGAACCAGA GTAGAATCATACACACTGTTTTTTAGAAAACAGTGGGAATTCCCAACCCA GGCAGTCTCGAATTCGTCGATTTGAGCTCTAGACCAGGTACCTCTATTTG TTAATGTATAACAACAGCTCTGGACAAAGGTTAAATCTATGTAAGCAGCT TCACTTGTGACGGATGGATGTATGTTATTTTATGTCCACTTGTTTCGAGC TGGATGGGACGGGCGAAGACCTTTACTTTATAATTTTGTCGTGCACTAGG GGAGTTTGCAGTCGAATGATCGGCTGCCATATGTACATACAGTATCATAC ATACATGTGCGACAACCGCGAGAGACTCG
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Coding sequence (CDS) from alignment at S-dermatodea_contig1073:12467..16645+

>mRNA_S-dermatodea_contig1073.498.1 ID=mRNA_S-dermatodea_contig1073.498.1|Name=mRNA_S-dermatodea_contig1073.498.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1362bp|location=Sequence derived from alignment at S-dermatodea_contig1073:12467..16645+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGAAGCTAAAGCACCTAGAGTCCGCACTGCAATCAGTGACCCGGTACAG
CGACCTGGGTCCCGACAATGTCGATATTGACCTCGAGCAATACAGATGAA
GCTAAAGCACCTAGAGTCCGCACTGCAATCAGTGACCCGGTACAGCGACC
TGGGTCCCGACAATGTCGATATTGACCTCGAGCAATACAGCACCTCGGCC
CATCTAGCCGCGCGAATGGCGTACACAGCCGAGTTCGAATTCGGCGACAT
CGAGGACCGAACCGTCCTTGATCTCGGCTGTGGTACGGGCATGCTGGGGA
TCGCCGCAGGAATGCTCGGCGCCAGCGCTGTGGTGGGACTCGACATGTCC
GAAGTAGGCCTTGCCGCTGCTGCGGAGAATGCCAAGAAGATGGATGTTGA
ACTGGATCTCGTGCGCTGCGACGTCGCGCGGAATCCCTGTGTGCCAGCAC
CTCGGCCCATCTAGCCGCGCGAATGGCGTACACAGCCGAGTTCGAATTCG
GCGACATCGAGGACCGAACCGTCCTTGATCTCGGCTGTGGTACGGGCATG
CTGGGGATCGCCGCAGGAATGCTCGGCGCCAGCGCTGTGGTGGGACTCGA
CATGTCCGAAGTAGGCCTTGCCGCTGCTGCGGAGAATGCCAAGAAGATGG
ATGTTGAACTGGATCTCGTGCGCTGCGACGTCGCGCGGAATCCCTGTGTG
CCAGAACGGTACGACACGGTGCTGATGAACCCCCCTTTCGGTACGCGAAG
AGCGGGCATCGACGTGATATTTCTAGAGCGTGCACTTGAGAACGGTACGA
CACGGTGCTGATGAACCCCCCTTTCGGTACGCGAAGAGCGGGCATCGACG
TGATATTTCTAGAGCGTGCACTTGAGGCCGCGACGACGGCGGTGTACTCC
ATGCACAAATCGTCCACGCGAAAAGCCGCGACGACGGCGGTGTACTCCAT
GCACAAATCGTCCACGCGAAAACATCTGCTCAAGAAAGCGCAGGAGTGGG
ATGTGGATGTTGCTGTTCTGGCACAGCTGCGCTTCGATATTCCCGCCACG
TACAAGTTCCACAAGCGCAATTCGGTGGATGTGGAGGTCGACCTGATTCG
ATTTCAGAAACGCTCCCCGCATTCCGATTCCGACAGCGACGTGCCGGTCA
AAGGGGAGCACAACTAACATCTGCTCAAGAAAGCGCAGGAGTGGGATGTG
GATGTTGCTGTTCTGGCACAGCTGCGCTTCGATATTCCCGCCACGTACAA
GTTCCACAAGCGCAATTCGGTGGATGTGGAGGTCGACCTGATTCGATTTC
AGAAACGCTCCCCGCATTCCGATTCCGACAGCGACGTGCCGGTCAAAGGG
GAGCACAACTAA
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