mRNA_S-dermatodea_contig10711.492.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10711.492.1 vs. uniprot
Match: A0A6H5JX88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX88_9PHAE) HSP 1 Score: 141 bits (355), Expect = 1.520e-38 Identity = 68/80 (85.00%), Postives = 75/80 (93.75%), Query Frame = 1
Query: 10 TQVDYSDIIAGRPKEVGLKVLASVCGGVKDREGLRFVDVSDNAMGPDGVDACRPAIEGKKELEALLMCNDGLSEAAMMVV 249
+QVD+SDIIAGRPKEVGL+VLA+VCGGV++REGL FVDVS+NAMGPDGVDACRPAIEGKKEL ALLMCNDGLS AAM V
Sbjct: 36 SQVDFSDIIAGRPKEVGLEVLAAVCGGVREREGLTFVDVSENAMGPDGVDACRPAIEGKKELRALLMCNDGLSAAAMEAV 115
BLAST of mRNA_S-dermatodea_contig10711.492.1 vs. uniprot
Match: D8LRW6_ECTSI (Ran-GTPase activating protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRW6_ECTSI) HSP 1 Score: 141 bits (356), Expect = 1.060e-37 Identity = 68/80 (85.00%), Postives = 75/80 (93.75%), Query Frame = 1
Query: 10 TQVDYSDIIAGRPKEVGLKVLASVCGGVKDREGLRFVDVSDNAMGPDGVDACRPAIEGKKELEALLMCNDGLSEAAMMVV 249
T+VD+SDIIAGRPKEVGL+VLA+VCGGV++REGL FVDVS+NAMGPDGVDACRPAIEGKKEL ALLMCNDGLS AAM V
Sbjct: 215 TEVDFSDIIAGRPKEVGLEVLAAVCGGVREREGLTFVDVSENAMGPDGVDACRPAIEGKKELRALLMCNDGLSAAAMEAV 294
BLAST of mRNA_S-dermatodea_contig10711.492.1 vs. uniprot
Match: A0A835ZA71_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA71_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 1.100e-21 Identity = 48/81 (59.26%), Postives = 63/81 (77.78%), Query Frame = 1
Query: 10 TQVDYSDIIAGRPKEVGLKVLASVCGGVKDREGLRFVDVSDNAMGPDGVDACRPAIEGKKE-LEALLMCNDGLSEAAMMVV 249
T+ D SD+IAGRP+++ L+VLA++CGG+ R L +DVSDNAMG GV+ACR A+EG++E L AL MCNDGLS +AM V
Sbjct: 74 TEADISDVIAGRPEDMALRVLAAICGGLAGRS-LSLIDVSDNAMGEKGVNACRAALEGQRETLSALRMCNDGLSASAMEAV 153
BLAST of mRNA_S-dermatodea_contig10711.492.1 vs. uniprot
Match: A0A2D4CFZ3_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CFZ3_PYTIN) HSP 1 Score: 76.3 bits (186), Expect = 2.410e-14 Identity = 36/83 (43.37%), Postives = 58/83 (69.88%), Query Frame = 1
Query: 1 KTHTQVDYSDIIAGRPKEVGLKVLASVCGGVKDREGLRFVDVSDNAMGPDGVDACRPAIEGKKELEALLMCNDGLSEAAMMVV 249
+T T VD++D+IAGRP++ L+VLA++C ++ + L +D+SDNA+G GV AC + G++EL + CN+G+S AA V+
Sbjct: 76 ETLTSVDFADMIAGRPEDEALQVLATLCDALQSIKTLLRIDLSDNALGEKGVRACFGLLLGQEELRHVYFCNNGISAAAAKVI 158
BLAST of mRNA_S-dermatodea_contig10711.492.1 vs. uniprot
Match: A0A8J4S058_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae 00238/432 TaxID=1284355 RepID=A0A8J4S058_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 7.330e-14 Identity = 35/80 (43.75%), Postives = 56/80 (70.00%), Query Frame = 1
Query: 10 TQVDYSDIIAGRPKEVGLKVLASVCGGVKDREGLRFVDVSDNAMGPDGVDACRPAIEGKKELEALLMCNDGLSEAAMMVV 249
T VD++D+IAGRP++ L+VLA++C + D + L +D+SDNA+G GV AC + ++EL+ + CN+G+S AA V+
Sbjct: 76 TSVDFADMIAGRPEDEALQVLATLCDALSDIKTLGRIDLSDNALGEKGVRACFGLLLNQEELQHVYFCNNGISAAAAGVI 155
BLAST of mRNA_S-dermatodea_contig10711.492.1 vs. uniprot
Match: W2PQ73_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2PQ73_PHYPN) HSP 1 Score: 73.6 bits (179), Expect = 8.640e-14 Identity = 33/80 (41.25%), Postives = 56/80 (70.00%), Query Frame = 1
Query: 10 TQVDYSDIIAGRPKEVGLKVLASVCGGVKDREGLRFVDVSDNAMGPDGVDACRPAIEGKKELEALLMCNDGLSEAAMMVV 249
T VD++D+IAGRP++ L+VLA++C + + L +D+SDNA+G GV AC ++ +++L+ + CN+G+S AA V+
Sbjct: 74 TSVDFADMIAGRPEDEALQVLATLCDALSAIKSLTRIDLSDNALGEKGVRACFGLLQNQEKLQHMYFCNNGISAAAAGVI 153
BLAST of mRNA_S-dermatodea_contig10711.492.1 vs. uniprot
Match: A0A6A3J101_9STRA (Uncharacterized protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3J101_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 1.570e-13 Identity = 33/80 (41.25%), Postives = 56/80 (70.00%), Query Frame = 1
Query: 10 TQVDYSDIIAGRPKEVGLKVLASVCGGVKDREGLRFVDVSDNAMGPDGVDACRPAIEGKKELEALLMCNDGLSEAAMMVV 249
T VD++D+IAGRP++ L+VLA++C + + L +D+SDNA+G GV AC ++ +++L+ + CN+G+S AA V+
Sbjct: 528 TSVDFADMIAGRPEDEALQVLATLCDALSSIKTLTRIDLSDNALGEKGVRACFGLLQNQEQLQHMYFCNNGISAAAAGVI 607
BLAST of mRNA_S-dermatodea_contig10711.492.1 vs. uniprot
Match: A0A225WYD6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WYD6_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 1.990e-13 Identity = 34/82 (41.46%), Postives = 57/82 (69.51%), Query Frame = 1
Query: 4 THTQVDYSDIIAGRPKEVGLKVLASVCGGVKDREGLRFVDVSDNAMGPDGVDACRPAIEGKKELEALLMCNDGLSEAAMMVV 249
T T VD++D+IAGRP++ L+VLA++C + + L +D+SDNA+G GV AC ++ +++L+ + CN+G+S AA V+
Sbjct: 73 TLTSVDFADMIAGRPEDEALQVLATLCDALSAIKTLTRIDLSDNALGEKGVRACFGLLQHQEQLQHMFFCNNGISAAAAGVI 154
BLAST of mRNA_S-dermatodea_contig10711.492.1 vs. uniprot
Match: W2J3U5_PHYPR (Uncharacterized protein (Fragment) n=13 Tax=Phytophthora TaxID=4783 RepID=W2J3U5_PHYPR) HSP 1 Score: 73.6 bits (179), Expect = 2.140e-13 Identity = 33/80 (41.25%), Postives = 56/80 (70.00%), Query Frame = 1
Query: 10 TQVDYSDIIAGRPKEVGLKVLASVCGGVKDREGLRFVDVSDNAMGPDGVDACRPAIEGKKELEALLMCNDGLSEAAMMVV 249
T VD++D+IAGRP++ L+VLA++C + + L +D+SDNA+G GV AC ++ +++L+ + CN+G+S AA V+
Sbjct: 91 TSVDFADMIAGRPEDEALQVLATLCDALSAIKSLTRIDLSDNALGEKGVRACFGLLQNQEKLQHMYFCNNGISAAAAGVI 170
BLAST of mRNA_S-dermatodea_contig10711.492.1 vs. uniprot
Match: A0A0W8DJV1_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DJV1_PHYNI) HSP 1 Score: 73.6 bits (179), Expect = 2.160e-13 Identity = 33/80 (41.25%), Postives = 56/80 (70.00%), Query Frame = 1
Query: 10 TQVDYSDIIAGRPKEVGLKVLASVCGGVKDREGLRFVDVSDNAMGPDGVDACRPAIEGKKELEALLMCNDGLSEAAMMVV 249
T VD++D+IAGRP++ L+VLA++C + + L +D+SDNA+G GV AC ++ +++L+ + CN+G+S AA V+
Sbjct: 393 TSVDFADMIAGRPEDEALQVLATLCDALSAIKSLTRIDLSDNALGEKGVRACFGLLQNQEKLQHMYFCNNGISAAAAGVI 472 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10711.492.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10711.492.1 >prot_S-dermatodea_contig10711.492.1 ID=prot_S-dermatodea_contig10711.492.1|Name=mRNA_S-dermatodea_contig10711.492.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=83bp KTHTQVDYSDIIAGRPKEVGLKVLASVCGGVKDREGLRFVDVSDNAMGPDback to top mRNA from alignment at S-dermatodea_contig10711:794..1042- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10711.492.1 ID=mRNA_S-dermatodea_contig10711.492.1|Name=mRNA_S-dermatodea_contig10711.492.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=249bp|location=Sequence derived from alignment at S-dermatodea_contig10711:794..1042- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10711:794..1042- >mRNA_S-dermatodea_contig10711.492.1 ID=mRNA_S-dermatodea_contig10711.492.1|Name=mRNA_S-dermatodea_contig10711.492.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=498bp|location=Sequence derived from alignment at S-dermatodea_contig10711:794..1042- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |