mRNA_S-dermatodea_contig107.479.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig107.479.1 vs. uniprot
Match: D7FSS5_ECTSI (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSS5_ECTSI) HSP 1 Score: 446 bits (1147), Expect = 9.730e-150 Identity = 230/352 (65.34%), Postives = 270/352 (76.70%), Query Frame = 1
Query: 139 SELRQRPSTMR-NKDNAPAPD------IPSPAPLPKKSGGCPVQIKSGVYYWVRKAVVILFPAYVLCCMFEVLEPPKPLIRHAWYDAVELLGGGPRVFSAADLKEEGGGGRPMLSVLGEVFDVSKGAKHYGPNGAYRGFTGKDASRAFVSGDFTEAGLTDDVSGLEPSQCLGIKDWHSFYKNDDKYKQRGFLAGRFHDARGAPTPALAAFERCAEEGQREKEREAEQKQLYPNCNSRWAAAEGGRVWCEDPKKVPRKFAPKAVHGADIRAAGSQGAVKPGGAGESGGQTPGAE---GGEGADGD---SRNAAKVKGRCSCFDREFAEENKDRLLSYSGCAPGANLCETKPPE 1155
SELR+RP MR N D + AP +P P PKKS GCP+Q+KSG YY+VRKAVVILFPAY+LCCMF VLEPP+P+ H W A+ LG GPRVFSAA+LK +G G RPMLS+LGEVFDVSKGAKHYG GAY FTGKDASR+FVSG+FTEAGLTDD+SGLEPS+CLGIKDWH FY+N ++YK+RG LAGRF+DA G PT LA F +C +G +EKEREA +K LYP+CNSRW+A EGGRVWCED KKVPRKFAP+ VHGA IR G +G+ +P +SG T AE GG G G+ S +AAKVKGRCSCFD ++A+ N+ RLLSY GCAP +N C TKPPE
Sbjct: 2 SELRRRP--MRGNSDASAAPGPGSTAAVPPPVDAPKKSSGCPIQVKSGTYYYVRKAVVILFPAYILCCMFGVLEPPRPMAEHTWDAAMLALGRGPRVFSAAELKAKGSGSRPMLSILGEVFDVSKGAKHYGKGGAYESFTGKDASRSFVSGNFTEAGLTDDLSGLEPSKCLGIKDWHEFYQNHEQYKKRGLLAGRFYDANGKPTRELAPFHKCPRKGTKEKEREAAEKLLYPSCNSRWSAPEGGRVWCEDEKKVPRKFAPENVHGAGIREQG-EGSSQP----KSGATTQAAEAAGGGSGLSGEAEASTDAAKVKGRCSCFDVDYAKANEHRLLSYGGCAPESNSCMTKPPE 346
BLAST of mRNA_S-dermatodea_contig107.479.1 vs. uniprot
Match: A0A6H5LMN7_9PHAE (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LMN7_9PHAE) HSP 1 Score: 391 bits (1004), Expect = 1.660e-128 Identity = 209/322 (64.91%), Postives = 243/322 (75.47%), Query Frame = 1
Query: 139 SELRQRPSTMRNKDNA-PAPD----IPSPAPLPKKSGGCPVQIKSGVYYWVRKAVVILFPAYVLCCMFEVLEPPKPLIRHAWYDAVELLGGGPRVFSAADLKEEGGGGRPMLSVLGEVFDVSKGAKHYGPNGAYRGFTGKDASRAFVSGDFTEAGLTDDVSGLEPSQCLGIKDWHSFYKNDDKYKQRGFLAGRFHDARGAPTPALAAFERCAEEGQREKEREAEQKQLYPNCNSRWAAAEGGRVWCEDPKKVPRKFAPKAVHGADIRAAGSQGAVKPGGAGESGGQTPGAE---GGEGADGD---SRNAAKV-----KGRCS 1056
SELRQRP + +A P P +P PA PKKS GCP+Q+KSG YY+VRKAVVILFPAY+LCCMF VLEPP+P+ H W A+ LG GPR+FSAA+LK +G G RPMLS+LGEVFDVSKGAKHYG GAY FTGKDASR+FVSG+FTEAGLTDD+SGLEPS+CLGIKDWH FY++ + YK+RG LAGRF+DA G PT LAAF +CA +G +EKEREA +K LYP+CNSRW+AAEGGRVWCED KKVPRKFAP+ VHGA IR G +G +P ESG AE GG G G+ SR+AAKV KGR S
Sbjct: 2 SELRQRPVPGSSAASAAPGPGSTAAVPPPAGAPKKSSGCPIQVKSGTYYYVRKAVVILFPAYILCCMFGVLEPPRPMAEHTWDAAMLALGRGPRIFSAAELKAKGSGSRPMLSILGEVFDVSKGAKHYGKGGAYESFTGKDASRSFVSGNFTEAGLTDDLSGLEPSECLGIKDWHEFYQSHELYKKRGLLAGRFYDANGEPTRELAAFHKCARKGAKEKEREAAEKLLYPSCNSRWSAAEGGRVWCEDEKKVPRKFAPENVHGAGIREQG-EGKSQP----ESGVAKQAAEAAGGGSGVGGEAEASRDAAKVCCAWVKGRSS 318
BLAST of mRNA_S-dermatodea_contig107.479.1 vs. uniprot
Match: A0A6P7PPP2_BETSP (neuferricin n=1 Tax=Betta splendens TaxID=158456 RepID=A0A6P7PPP2_BETSP) HSP 1 Score: 166 bits (420), Expect = 1.550e-43 Identity = 101/260 (38.85%), Postives = 125/260 (48.08%), Query Frame = 1
Query: 403 RVFSAADLKE---EGGGGRPMLSVLGEVFDVSKGAKHYGPNGAYRGFTGKDASRAFVSGDFTEAGLTDDVSGLEPSQCLGIKDWHSFYKNDDKYKQRGFLAGRFHDARGAPTPALAAFERCAEEGQREKEREAEQKQLYPNCNSRWAAAEGGRVWCE--------DPKKVPRK-FAPKAVHGADIRAAGSQGAVKPGGAGESGGQTPGAEGGEGADGDSRNAAKVKGRCSCFDREFAEENKDRLLSYSGCAPGANLCETK 1146
R+ S ++L + E G L++LG VFDV KG KHYGP GAYR GKDAS +FV+GDFTE GLTDDVS L P Q L + DW +FY++ Y+ GF+ GRF+ G PTPAL E EG+R K + + +P CNS W+AA GGRVWC D VPRK F+P RC C + A E+ LL Y GC P A+ C K
Sbjct: 35 RLLSRSELSQYDGEDGSSGLYLAILGRVFDVHKGHKHYGPAGAYRSMAGKDASLSFVTGDFTEGGLTDDVSSLSPLQVLALYDWLAFYESH--YQFVGFVTGRFYSETGQPTPALLQVEASRAEGERMKSQSDAEMLRFPQCNSEWSAARGGRVWCSTKSGGVVRDWTGVPRKRFSP---------------------------------------------GSTSVRCVCVEDPAAAEDNPNLLKYEGCPPHADSCSVK 247
BLAST of mRNA_S-dermatodea_contig107.479.1 vs. uniprot
Match: A0A1Y1I9L4_KLENI (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I9L4_KLENI) HSP 1 Score: 166 bits (420), Expect = 2.790e-43 Identity = 81/152 (53.29%), Postives = 102/152 (67.11%), Query Frame = 1
Query: 454 MLSVLGEVFDVSKGAKHYGPNGAYRGFTGKDASRAFVSGDFTEAGLTDDVSGLEPSQCLGIKDWHSFYKNDDKYKQRGFLAGRFHDARGAPTPALAAFERCAEEGQREKEREAEQKQLYPNCNSRWAAAEGGRVWCEDPKKVPRKFAPKAVH 909
++++LG VFDV+KGA HYGP G Y F G+DAS AFV+GDF+ AGLTDDVSGL PSQ G+ W FY ++YKQ G LAGR++D RG T AL + E EE E R E+++ YP CNSRW+ A GG VWC+ K PR+F + H
Sbjct: 89 LIAILGTVFDVTKGADHYGPGGGYSHFAGRDASAAFVTGDFSPAGLTDDVSGLAPSQVAGVAQWRQFYV--ERYKQVGVLAGRYYDDRGEATAALRSVEAALEEAAHEDARRKEEEKQYPACNSRWSQAAGGEVWCD--KGFPRQFFSGSEH 236
BLAST of mRNA_S-dermatodea_contig107.479.1 vs. uniprot
Match: A0A1I9VZF2_PETMA (Neuferricin n=3 Tax=Petromyzon marinus TaxID=7757 RepID=A0A1I9VZF2_PETMA) HSP 1 Score: 166 bits (420), Expect = 3.580e-43 Identity = 97/210 (46.19%), Postives = 127/210 (60.48%), Query Frame = 1
Query: 268 YWVRKAVVILFPAYVLCCMFEVLEPPKPLIRHAWYDAVELL---------GGGPRVFSAADL-KEEGGGGRP--MLSVLGEVFDVSKGAKHYGPNGAYRGFTGKDASRAFVSGDFTEAGLTDDVSGLEPSQCLGIKDWHSFYKNDDKYKQRGFLAGRFHDARGAPTPALAAFERCAEEGQREKEREAEQKQLYPNCNSRWAAAEGGRVWC 861
+W+ ++ + A +L LEPP LI W +LL G R+ + ++L + +G G P L+VLG+VFDVSKGAKHYGP +Y+ G+DASRAFVSGDF++AGL DDVSGL P+Q LG+ DW SFY+ D Y G L GRF+D +G PT AL E G + KE + QK+ +P CNS W+AA G RVWC
Sbjct: 5 WWLAVSLCVAGSALLL----SRLEPPGRLIT--WLQQ-QLLPAHFFPSPSSGQQRLLTLSELGRYDGQEGSPGLYLAVLGQVFDVSKGAKHYGPGASYQALAGRDASRAFVSGDFSDAGLVDDVSGLSPAQMLGLHDWLSFYQRD--YAYVGKLVGRFYDEQGRPTEALREVEEALALGHKAKEEKELQKRRFPPCNSEWSAASGSRVWC 205
BLAST of mRNA_S-dermatodea_contig107.479.1 vs. uniprot
Match: UPI0014032CD0 (neuferricin n=1 Tax=Amblyraja radiata TaxID=386614 RepID=UPI0014032CD0) HSP 1 Score: 163 bits (413), Expect = 2.800e-42 Identity = 88/157 (56.05%), Postives = 111/157 (70.70%), Query Frame = 1
Query: 403 RVFSAADLKEE-GGGGRP--MLSVLGEVFDVSKGAKHYGPNGAYRGFTGKDASRAFVSGDFTEAGLTDDVSGLEPSQCLGIKDWHSFYKNDDKYKQRGFLAGRFHDARGAPTPALAAFERCAEEGQREK-EREAEQKQLYPNCNSRWAAAEGGRVWC 861
R+FS A+L GG G P L+VLG+VFDV KG KHYGP+G+YR F G+DASRAFVSGDFT++GL DDVSGL P++ L ++DW FYK + YK R LAG ++D G PT AL E+ E+G++ K E E E KQ +P CNS W + +GGRVWC
Sbjct: 45 RLFSKAELSHYCGGKGSPGLYLAVLGQVFDVRKGTKHYGPSGSYRFFAGRDASRAFVSGDFTDSGLVDDVSGLSPTEMLSLQDWLIFYKREYIYKGR--LAGTYYDHNGEPTQALIHAEQLTEQGRKLKAESEWENKQ-FPPCNSEWTSTKGGRVWC 198
BLAST of mRNA_S-dermatodea_contig107.479.1 vs. uniprot
Match: A0A851LNK2_CORCR (NEUFC protein (Fragment) n=1 Tax=Corythaeola cristata TaxID=103954 RepID=A0A851LNK2_CORCR) HSP 1 Score: 162 bits (410), Expect = 6.630e-42 Identity = 89/191 (46.60%), Postives = 115/191 (60.21%), Query Frame = 1
Query: 352 LIRHAWYDAVELLGGGPRVFSAADL-KEEGGGGRP--MLSVLGEVFDVSKGAKHYGPNGAYRGFTGKDASRAFVSGDFTEAGLTDDVSGLEPSQCLGIKDWHSFYKNDDKYKQRGFLAGRFHDARGAPTPALAAFERCAEEGQREKEREAEQKQLYPNCNSRWAAAEGGRVWCE--------DPKKVPRKF 891
L+R + LL R+ SAA+L + G G P L+VLG VFDV +G +HYGP GAY G G+DA+RAF +GDFT+AGL D+VSGL P++ L I+ W FY+ D Y+ G L GRF+DA GAPT AL E EE + K ++KQ +P CNS W++A+G R WC D VPRK
Sbjct: 23 LLRRGFEPRAWLLPRPGRLLSAAELARYRGAVGEPGLYLAVLGHVFDVERGRRHYGPGGAYSGLAGRDATRAFATGDFTQAGLVDEVSGLSPAELLAIRSWLDFYR--DNYRPVGKLVGRFYDANGAPTEALRQAEAAMEEALKFKAESEQRKQQFPPCNSEWSSAKGSRFWCSRQSGGVNRDWTGVPRKL 211
BLAST of mRNA_S-dermatodea_contig107.479.1 vs. uniprot
Match: A0A7K5YVL3_9AVES (NEUFC protein (Fragment) n=2 Tax=Pteroclidae TaxID=56295 RepID=A0A7K5YVL3_9AVES) HSP 1 Score: 162 bits (409), Expect = 9.960e-42 Identity = 98/214 (45.79%), Postives = 118/214 (55.14%), Query Frame = 1
Query: 283 AVVILFPAYVLCCMFEVLEPPKPLIRHAWYDAVELLGGGPRVFSAADL-KEEGGGGRP--MLSVLGEVFDVSKGAKHYGPNGAYRGFTGKDASRAFVSGDFTEAGLTDDVSGLEPSQCLGIKDWHSFYKNDDKYKQRGFLAGRFHDARGAPTPALAAFERCAEEGQREKEREAEQKQLYPNCNSRWAAAEGGRVWCE--------DPKKVPRKF 891
AVV L C + EP AW LL R+ SAA+L + G GG P L+VLG VFDV +G KHYGP GAY G G DA+RAF +GDFT AGL DDVSGL P + I+ W SFY+ D Y+ G L GRF+D GAPT AL E EE + K ++KQ +P CNS W++A+G R WC D VPRK
Sbjct: 13 AVVALLCLGAACLLGRGFEP------RAWL----LLPPRGRLLSAAELARYRGAGGEPGLYLAVLGRVFDVERGRKHYGPGGAYSGLAGTDATRAFATGDFTPAGLVDDVSGLSPGELATIQSWLSFYR--DNYEPVGKLVGRFYDENGAPTEALRQAEAAIEEALKVKAESQQRKQQFPPCNSEWSSAKGTRFWCSKQSGGVTRDWTGVPRKL 214
BLAST of mRNA_S-dermatodea_contig107.479.1 vs. uniprot
Match: A0A7L0RXB5_GLABR (NEUFC protein (Fragment) n=6 Tax=Neognathae TaxID=8825 RepID=A0A7L0RXB5_GLABR) HSP 1 Score: 161 bits (408), Expect = 1.300e-41 Identity = 86/174 (49.43%), Postives = 107/174 (61.49%), Query Frame = 1
Query: 403 RVFSAADL-KEEGGGGRP--MLSVLGEVFDVSKGAKHYGPNGAYRGFTGKDASRAFVSGDFTEAGLTDDVSGLEPSQCLGIKDWHSFYKNDDKYKQRGFLAGRFHDARGAPTPALAAFERCAEEGQREKEREAEQKQLYPNCNSRWAAAEGGRVWCE--------DPKKVPRKF 891
R+ SAA+L + G G P L+VLG VFDV +G +HYGP GAY GF G+DA+RAF +GDFT+AGL DDVS L P + L I+ W SFY D Y G L GRF+D GAPT AL E EE Q+ + ++KQ +P CNS W++A+G R WC D VPRK
Sbjct: 41 RLLSAAELARYRGAAGEPGLYLAVLGRVFDVERGRRHYGPGGAYSGFAGRDATRAFATGDFTQAGLVDDVSALSPGEMLAIQSWLSFYS--DNYDPVGKLVGRFYDENGAPTEALREAEAAIEEAQKLQAESKQRKQQFPPCNSEWSSAKGSRFWCSRQSGGVNRDWTGVPRKL 212
BLAST of mRNA_S-dermatodea_contig107.479.1 vs. uniprot
Match: A0A672FEF3_SALFA (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672FEF3_SALFA) HSP 1 Score: 160 bits (406), Expect = 1.560e-41 Identity = 91/235 (38.72%), Postives = 116/235 (49.36%), Query Frame = 1
Query: 457 LSVLGEVFDVSKGAKHYGPNGAYRGFTGKDASRAFVSGDFTEAGLTDDVSGLEPSQCLGIKDWHSFYKNDDKYKQRGFLAGRFHDARGAPTPALAAFERCAEEGQREKEREAEQKQLYPNCNSRWAAAEGGRVWCE--------DPKKVPRKFAPKAVHGADIRAAGSQGAVKPGGAGESGGQTPGAEGGEGADGDSRNAAKVKGRCSCFDREFAEENKDRLLSYSGCAPGANLC 1137
L++LG+VFDV+KG KHYGP GAY G+DAS +F++GDF+E GLTDDVSGL P Q + + DW +FY+ + Y+ G + GRF+ G PT AL E EGQR K R +K YP CNS W++A+GGRVWC D VPRK HG RC C + +A E L Y GC+P A+ C
Sbjct: 59 LALLGQVFDVNKGHKHYGPGGAYHFMAGRDASCSFITGDFSEGGLTDDVSGLSPVQVVALYDWLAFYQRE--YQTVGVVIGRFYSTSGQPTEALLRVEASRAEGQRIKARAEAEKMRYPACNSEWSSAKGGRVWCSTKSGGVVRDWTGVPRKRFSARSHGV--------------------------------------------RCVCVEDPYAAEEDPNLQRYDGCSPHADSC 247 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig107.479.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig107.479.1 >prot_S-dermatodea_contig107.479.1 ID=prot_S-dermatodea_contig107.479.1|Name=mRNA_S-dermatodea_contig107.479.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=350bp MPSELRQRPSTMRNKDNAPAPDIPSPAPLPKKSGGCPVQIKSGVYYWVRKback to top mRNA from alignment at S-dermatodea_contig107:7821..15180+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig107.479.1 ID=mRNA_S-dermatodea_contig107.479.1|Name=mRNA_S-dermatodea_contig107.479.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=7360bp|location=Sequence derived from alignment at S-dermatodea_contig107:7821..15180+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig107:7821..15180+ >mRNA_S-dermatodea_contig107.479.1 ID=mRNA_S-dermatodea_contig107.479.1|Name=mRNA_S-dermatodea_contig107.479.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2100bp|location=Sequence derived from alignment at S-dermatodea_contig107:7821..15180+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |