mRNA_S-dermatodea_contig10668.470.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_S-dermatodea_contig10668.470.1
Unique Name	mRNA_S-dermatodea_contig10668.470.1
Type	mRNA
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)

Homology

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BLAST of mRNA_S-dermatodea_contig10668.470.1 vs. uniprot
Match: D7FXY8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXY8_ECTSI)

HSP 1 Score: 224 bits (570), Expect = 9.340e-69
Identity = 114/129 (88.37%), Postives = 121/129 (93.80%), Query Frame = 1

Query:    1 QLHHERDLGVPIDVIDPRNYLLPKKPVPLPKEDEALINWREGESRGSVKKEDLSTSARRKAVDTSVTWLKKTVYLTNDPFDPVHQFKSEQQTQADKEVELEEELARGGLQDRKMLIEESFLHANSRKPV 387
            +LH+ERDLGVPIDVIDPRNYLLPKK VPLP EDEAL+NWREG+  GSVKKEDLSTSARRK VDTSVTWLKKTVYLTNDPFDPVHQFKSEQQTQADKEVELE+E+ARG  QDRKMLIEESFLHANS KP+
Sbjct:   68 KLHYERDLGVPIDVIDPRNYLLPKKAVPLPPEDEALLNWREGDGPGSVKKEDLSTSARRKTVDTSVTWLKKTVYLTNDPFDPVHQFKSEQQTQADKEVELEKEIARGKKQDRKMLIEESFLHANSNKPL 196

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BLAST of mRNA_S-dermatodea_contig10668.470.1 vs. uniprot
Match: A0A835YRH5_9STRA (Paf1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRH5_9STRA)

HSP 1 Score: 108 bits (270), Expect = 5.240e-25
Identity = 61/129 (47.29%), Postives = 85/129 (65.89%), Query Frame = 1

Query:    1 QLHHERDLGVPIDVIDPRNYLLPKKPVPLPKEDEALINWREGE-SRGSVKKED-LSTSARRKAVDTSVTWLKKTVYLTNDPFDPVHQFKSEQQTQADKEVELEEELARGGLQDRKMLIEESFLHANSRK 381
            +LH  RDLGV ID+ID R+Y +P KP  L  +D  L+ W + E   G+ + E+  S   +RK VDTSVTWLKKTVYLTNDPFD VH+F+S++Q Q D +  +++++      DR   + +SF  ANS+K
Sbjct:  152 KLHCNRDLGVDIDIIDSRSYSVPDKPPTLHPKDAELLQWDKVERGNGAAEAEEGFSRRMQRKQVDTSVTWLKKTVYLTNDPFDAVHKFRSDRQVQMDAKERMQKDMEESRKTDRVSAVLQSFAEANSKK 280

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BLAST of mRNA_S-dermatodea_contig10668.470.1 vs. uniprot
Match: F0W354_9STRA (RNA polymerase IIassociated factor 1 putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W354_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 1.010e-9
Identity = 44/124 (35.48%), Postives = 67/124 (54.03%), Query Frame = 1

Query:    1 QLHHERDLGVPIDVIDPRNYLLPKKPVPLPKEDEALINWREGESRGSVKKEDLSTSARRKAVDTSVTWLKKTVYLTNDPFDPVHQFKSEQQTQADKEVELEEELARGGLQDRKMLIEESFLHAN 372
            ++H E +LG+ ID+IDP  Y +P    PL   DEA++  +E +S+      D  + AR       V+WL++T Y+ ND ++PVH+FKSE + Q++     E  LA       K   E+SF   N
Sbjct:  165 EIHEEPNLGLSIDLIDPAKYEVPTVTEPLEAGDEAVLMMKETQSK------DTKSKARP-----VVSWLRRTEYMGNDLYEPVHKFKSEVEFQSELREGTENALAEEVQVTLKQRAEDSFKDVN 277

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BLAST of mRNA_S-dermatodea_contig10668.470.1 vs. uniprot
Match: A0A152A5K3_9MYCE (RNA polymerase II-associated factor 1 n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A5K3_9MYCE)

HSP 1 Score: 54.7 bits (130), Expect = 4.290e-6
Identity = 30/72 (41.67%), Postives = 44/72 (61.11%), Query Frame = 1

Query:   13 ERDLGVPIDVIDPRNYLLPKKPVPLPKEDEALINWREGESRGSVKKEDLSTSARRKAVDTSVTWLKKTVYLT 228
            E  LG+PI++IDP  Y  PK  +P+P ED+ L+      S    ++E+ S  + +K V  SVTWL+KT YL+
Sbjct:  144 EPHLGIPIELIDPTLYYTPKSKLPIPTEDQTLLR-----SLSVQEEEEKSLKSVKKPVRPSVTWLRKTEYLS 210

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BLAST of mRNA_S-dermatodea_contig10668.470.1 vs. uniprot
Match: A0A7S3YBK4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YBK4_HETAK)

HSP 1 Score: 53.5 bits (127), Expect = 4.320e-6
Identity = 27/44 (61.36%), Postives = 31/44 (70.45%), Query Frame = 1

Query:    1 QLHHERDLGVPIDVIDPRNYLLPK-KPVPLPKEDEALINWREGE 129
            QLH ERDLGVPID+IDP  YL+P   P P+   D AL+ WRE E
Sbjct:  141 QLHCERDLGVPIDLIDPARYLVPPGTPPPMDPADRALLEWREEE 184

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BLAST of mRNA_S-dermatodea_contig10668.470.1 vs. uniprot
Match: A0A024FZ64_9STRA (Uncharacterized protein n=8 Tax=Albugo candida TaxID=65357 RepID=A0A024FZ64_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 1.110e-5
Identity = 44/144 (30.56%), Postives = 67/144 (46.53%), Query Frame = 1

Query:    1 QLHHERDLGVPIDVIDPRNY--------------------LLPKKPVPLPKEDEALINWREGESRGSVKKEDLSTSARRKAVDTSVTWLKKTVYLTNDPFDPVHQFKSEQQTQADKEVELEEELARGGLQDRKMLIEESFLHAN 372
            ++H E +LG+ ID+IDP  Y                     +P K  PL   DEA++  +E +S+      D    AR       V+WL++T Y+ ND ++PVH+FKSE + Q++     E  LA       +   E+SF   N
Sbjct:  165 EIHEEPNLGLSIDLIDPAKYEGRSLDGHLYGRVLMFCVIDTVPTKAEPLEAGDEAVLMMKETQSK------DTKYKARP-----VVSWLRRTEYMGNDLYEPVHKFKSEVEFQSELREGTENALAEEVQVTLEQRAEDSFKDIN 297

[Close]

BLAST of mRNA_S-dermatodea_contig10668.470.1 vs. uniprot
Match: A0A7S3YEK7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEK7_HETAK)

HSP 1 Score: 51.6 bits (122), Expect = 3.650e-5
Identity = 28/64 (43.75%), Postives = 42/64 (65.62%), Query Frame = 1

Query:  172 RRKAVDTSVTWLKKTVYLTNDPFD-PVHQFKSEQQTQADKEVELEEELARGGLQDRKMLIEESF 360
            +RK+VDT+VTW+K+T YL+ND +  PVH FKS+    A++   L++E+    LQ     IE +F
Sbjct:    8 KRKSVDTNVTWMKRTTYLSNDLYGAPVHAFKSQAAAVAEQNAGLDQEMVEVNLQSAATKIEATF 71

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig10668.470.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig10668.470.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7


Match Name	E-value	Identity	Description
D7FXY8_ECTSI	9.340e-69	88.37	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835YRH5_9STRA	5.240e-25	47.29	Paf1-domain-containing protein n=1 Tax=Tribonema m...	[more]
F0W354_9STRA	1.010e-9	35.48	RNA polymerase IIassociated factor 1 putative n=1 ...	[more]
A0A152A5K3_9MYCE	4.290e-6	41.67	RNA polymerase II-associated factor 1 n=1 Tax=Tieg...	[more]
A0A7S3YBK4_HETAK	4.320e-6	61.36	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A024FZ64_9STRA	1.110e-5	30.56	Uncharacterized protein n=8 Tax=Albugo candida Tax...	[more]
A0A7S3YEK7_HETAK	3.650e-5	43.75	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig10668	contig	S-dermatodea_contig10668:41..2866 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	227.3
Seed ortholog evalue	4.2e-57
Seed eggNOG ortholog	2880.D7FXY8
Preferred name	PAF1
KEGG rclass	RC00080,RC00216,RC00242,RC00255
KEGG ko	ko:K00294,ko:K11673,ko:K15174
KEGG Reaction	R00245,R00707,R00708,R04444,R04445,R05051
KEGG Pathway	ko00250,ko00330,ko01100,ko04011,map00250,map00330,map01100,map04011
GOs	GO:0000018,GO:0000082,GO:0000083,GO:0000122,GO:0000183,GO:0000278,GO:0000414,GO:0000416,GO:0000428,GO:0000785,GO:0000981,GO:0000983,GO:0000988,GO:0000989,GO:0000993,GO:0001015,GO:0001076,GO:0001098,GO:0001099,GO:0001704,GO:0001706,GO:0001711,GO:0001932,GO:0001934,GO:0002237,GO:0002682,GO:0002683,GO:0003674,GO:0003682,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006282,GO:0006289,GO:0006323,GO:0006325,GO:0006333,GO:0006342,GO:0006351,GO:0006353,GO:0006354,GO:0006355,GO:0006356,GO:0006357,GO:0006360,GO:0006362,GO:0006364,GO:0006366,GO:0006368,GO:0006378,GO:0006396,GO:0006397,GO:0006464,GO:0006479,GO:0006513,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007275,GO:0007369,GO:0007492,GO:0007507,GO:0008023,GO:0008104,GO:0008150,GO:0008152,GO:0008213,GO:0009058,GO:0009059,GO:0009302,GO:0009605,GO:0009607,GO:0009617,GO:0009653,GO:0009790,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009909,GO:0009910,GO:0009987,GO:0010033,GO:0010390,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010638,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016074,GO:0016458,GO:0016567,GO:0016569,GO:0016570,GO:0016571,GO:0016574,GO:0016584,GO:0016591,GO:0016593,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019538,GO:0019827,GO:0019899,GO:0022402,GO:0022607,GO:0022613,GO:0030054,GO:0030154,GO:0030880,GO:0031056,GO:0031058,GO:0031060,GO:0031062,GO:0031123,GO:0031124,GO:0031126,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031396,GO:0031399,GO:0031401,GO:0031440,GO:0031442,GO:0031497,GO:0031935,GO:0031938,GO:0031974,GO:0031981,GO:0032259,GO:0032268,GO:0032270,GO:0032446,GO:0032496,GO:0032501,GO:0032502,GO:0032774,GO:0032784,GO:0032786,GO:0032968,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033182,GO:0033365,GO:0033523,GO:0033554,GO:0033993,GO:0034243,GO:0034470,GO:0034504,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0034728,GO:0035327,GO:0035987,GO:0036211,GO:0040029,GO:0042221,GO:0042254,GO:0042325,GO:0042327,GO:0043144,GO:0043170,GO:0043175,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0043628,GO:0043631,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044770,GO:0044772,GO:0044843,GO:0044877,GO:0045165,GO:0045309,GO:0045595,GO:0045596,GO:0045637,GO:0045638,GO:0045787,GO:0045814,GO:0045892,GO:0045893,GO:0045910,GO:0045934,GO:0045935,GO:0045937,GO:0045943,GO:0045944,GO:0046483,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048580,GO:0048581,GO:0048583,GO:0048598,GO:0048646,GO:0048731,GO:0048831,GO:0048856,GO:0048869,GO:0050684,GO:0050685,GO:0050789,GO:0050793,GO:0050794,GO:0050815,GO:0050896,GO:0051052,GO:0051053,GO:0051093,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051219,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051569,GO:0051641,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0055029,GO:0060255,GO:0060795,GO:0060968,GO:0061695,GO:0065007,GO:0070013,GO:0070063,GO:0070647,GO:0070727,GO:0070887,GO:0070911,GO:0071103,GO:0071216,GO:0071219,GO:0071222,GO:0071310,GO:0071396,GO:0071704,GO:0071824,GO:0071840,GO:0072359,GO:0080090,GO:0080134,GO:0080135,GO:0090068,GO:0090262,GO:0090304,GO:0097659,GO:0098727,GO:0098781,GO:0099122,GO:0140110,GO:1901360,GO:1901362,GO:1901407,GO:1901409,GO:1901564,GO:1901576,GO:1901700,GO:1901701,GO:1901987,GO:1901989,GO:1902275,GO:1902494,GO:1902679,GO:1902680,GO:1902806,GO:1902808,GO:1903047,GO:1903311,GO:1903313,GO:1903320,GO:1903506,GO:1903507,GO:1903508,GO:1903706,GO:1903707,GO:1905269,GO:1990234,GO:1990269,GO:2000026,GO:2000112,GO:2000113,GO:2000241,GO:2000242,GO:2000819,GO:2001020,GO:2001141,GO:2001163,GO:2001165,GO:2001166,GO:2001173,GO:2001207,GO:2001209,GO:2001252,GO:2001253,GO:2001255
EggNOG free text desc.	transcription elongation from RNA polymerase II promoter
EggNOG OGs	KOG2478@1,KOG2478@2759
Ec32 ortholog description	RNA polymerase II-associated, Paf1
Ec32 ortholog	Ec-19_002080.1
EC	1.2.1.88
COG Functional cat.	S
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko01000,ko03021,ko03036
Hectar predicted targeting category	other localisation
Exons	3
Model size	387
Cds size	387
Stop	0
Start	0

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig10668.470.1	prot_S-dermatodea_contig10668.470.1	Saccorhiza dermatodea SderLu1190fm monoicous	polypeptide	S-dermatodea_contig10668 41..2866 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622924168.7992098-CDS-S-dermatodea_contig10668:40..182	1622924168.7992098-CDS-S-dermatodea_contig10668:40..182	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig10668 41..182 +
1694079064.7831259-CDS-S-dermatodea_contig10668:40..182	1694079064.7831259-CDS-S-dermatodea_contig10668:40..182	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig10668 41..182 +
1622924168.8082428-CDS-S-dermatodea_contig10668:1240..1377	1622924168.8082428-CDS-S-dermatodea_contig10668:1240..1377	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig10668 1241..1377 +
1694079064.8048878-CDS-S-dermatodea_contig10668:1240..1377	1694079064.8048878-CDS-S-dermatodea_contig10668:1240..1377	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig10668 1241..1377 +
1622924168.8167665-CDS-S-dermatodea_contig10668:2758..2866	1622924168.8167665-CDS-S-dermatodea_contig10668:2758..2866	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig10668 2759..2866 +
1694079064.8177576-CDS-S-dermatodea_contig10668:2758..2866	1694079064.8177576-CDS-S-dermatodea_contig10668:2758..2866	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig10668 2759..2866 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at S-dermatodea_contig10668:41..2866+
coding sequence from alignment at S-dermatodea_contig10668:41..2866+

protein sequence of mRNA_S-dermatodea_contig10668.470.1

>prot_S-dermatodea_contig10668.470.1 ID=prot_S-dermatodea_contig10668.470.1|Name=mRNA_S-dermatodea_contig10668.470.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=129bp
QLHHERDLGVPIDVIDPRNYLLPKKPVPLPKEDEALINWREGESRGSVKK
EDLSTSARRKAVDTSVTWLKKTVYLTNDPFDPVHQFKSEQQTQADKEVEL
EEELARGGLQDRKMLIEESFLHANSRKPV

mRNA from alignment at S-dermatodea_contig10668:41..2866+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_S-dermatodea_contig10668.470.1 ID=mRNA_S-dermatodea_contig10668.470.1|Name=mRNA_S-dermatodea_contig10668.470.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2826bp|location=Sequence derived from alignment at S-dermatodea_contig10668:41..2866+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CAGCTCCACCACGAGCGGGACCTGGGGGTGCCCATCGATGTTATCGACCC
GCGAAACTATCTCTTGCCGAAGAAGCCGGTACCCTTGCCTAAGGAAGACG
AGGCCCTCATCAATTGGCGGGAGGGGGAATCCCGCGGCTCAGGTTCGTTT
AGTGTTTTTTTTGTGGAAGGAATCATGCCCTATTACTGAGTTACTATTAT
TGCACTGCTGTTTGCGGCCCTGTGAAATGTGTAAGGGCCGTTTCTATCGA
GCGCTTTTTTCCCCTCACGAAACGTGAGAGAGCCAGTGCACCGCTTTTTT
TTATCTCCGCCGTTTCGCTGCAAAAAAAAAAAAGTCGCCTCACGTTTCGT
GAATTGAACACTCACGAAAAAAAAATGACGTGAGGGTTCTTCAATTCACG
AAACGTGAGGTTTGTAAAAAGGCGTGTTTGAAAAGGTAACGTTTCGTGAG
GTGTCCATTTTTGTGAGAAAACCGGCTCCGATAGAAACGGCCCTAATAAG
TGTGTGTGTGTGTGGTTTGTGTGTGTATGTGTGTATGTATGTATATATGT
ATCTATGTATTTTCGAGTCATGGTGCTGCGTATTTTGTTGTTGTTGGGAA
TGTGTCGTCGCTCCCCTTGTTTTTGGCAGGAGGCGTTACGGGCAGAAATT
GACGAACCACACGTCGCGTCGCGAGTTTTTTTTTGTTTGTTGTCTCGTCT
GTTTTCCTTGTTTTTCTTTGTCATTTTTTCTTTTTTTCTTTTTTCTTTTT
TCCCACACCCTTAATGTTCTTGTTCTCGTCCGTTAGGATAAACGTTCGCG
ACGAGGGCTCCGTCAATTTGTGTGTCTTGTGTCTGTGTCTGTGTTCGTGT
CTGTGTCCGTGTCTGTGTCTGTGTCCGTGTCTGTATCCGTGTCTGTGTCT
GTGTTCGTGTCTGTGTCTGTGTTCGTGTCTGTGTCTGTGTTCGTGTCTGT
GTCTGTGTTCGTGTCTGTGTCTGTGTCCGTGTCTGTGTCTTTGTTTGTGT
TTGTGTCTGTGTCCGTGTCTGTGTCTGTGTTCGTGTCTGTGTCTGTGTTC
GTGTCTGTGTCTGTGTCTGTGTTCGTTTCTGTGTCAGTGTCAGTGTCTGT
GTCTGTGTCTGTGGTGTTTGTCCCTTTGTGTTTTGATTTATTTTTGTCGC
GAAACACCAACTCCAGCCCCGCGCCCGCGCCCGCGCCCGCGCCCGCGCAG
TGAAAAAGGAGGATCTATCGACATCGGCAAGACGCAAGGCAGTGGACACG
TCAGTAACCTGGCTAAAGAAGACGGTGTACCTCACGAACGACCCCTTCGA
TCCCGTCCACCAGTTCAAGTCGGAGCAGCAGACGCAGGTGACACGACGAA
AGGATGGGCACGCCTACTAATAGTATTAATACTACTATTAATAATACTAT
TTATACTACTAATACTATTGATTCTATTAATACTATTGATACTACTAATA
CTACTAATATTATTTATACTAGTTATAGTATTTATACTATTCATAATACT
TTTTATACTATTTATATACGAAGTATAGTATTAATACTATTAATAATACT
ATTTATGCGTTGGCCGACTTTGATTAATTGGTGGATTTTATTGATTGATT
CATTTAATTTAATTTAATTTAATTTTATGTTGTTTACTGTTTGTGTGTGT
GTTCGCTTAATTACTTGTTTGTTTGTAACATTTATTGATTTGTTACTGAT
GAGGTGGTTCATTTGTAGATTAATTGATTGATTGATTGATTGATTGAATG
AGTGATTGATTGGATCATTTAATTGATTCATTGATTGATTGATTTGATTA
GTTAATTGATTGCATTATTTTTGTCACAGTTTTTGGTTGCCGATCCCGCT
CGGTCGTGTGGTCAGACGAGAAACAGATCGAGAAATCTATACACATATAC
ACAAGTAGACTTCTGATTTCAGTTAATTCCTCCTTGAATATTTGCTATGA
TAGCCTTTGCCCACAAGTCGGGTCGGTCGGCTTTAGCCGATCGCCTACCT
GTATACGCACATGCTCGTGTTCTAAAGGTGCACATCAATCAGGACCCTAA
AAACTATGCCCACCGTAGCAAACGATAGACCATACTGGTCTGGCCTTACA
AAACCATCTGCACATCTTTCGGTCTGAACTGTCAACAAAACAACCAAAAC
GATTAACGTAAGCTGTTGGAGCCAGCAACGTGTAGAAATAAAACCTTGGA
TATGCCATTGGACATATATTTTTATTCTGATTGCTTCTGTATACCTCCGT
TATATCCTTGTTAATTAATGTAATACAAGAGTCAAACCATTTTTTTGAAT
TTTTTCATATTGATTTAAGTGTGGCCCACAGCCCTAAGCTGAGGCCCGAT
TGTGGACACTATACCCTATACGATTTATATTTTTAAACTCCTACAGTATA
CGATTTGAACTCCTATACGATTTGAGGCCGATCTTGTACACTAAACTCGC
CGCCCGTCACCGCCCGCGCGGTCGCCGCGGTCTAGTCGAGCGCGGCGCCT
ACGCATGCCGTGGGTCGCCACACCGTATCCTCCAAACCCAACCCGCACAT
GCGTCCTGCCAACGCACACCTCGCGGGCGACAGCCATGGCTTGCAACTAG
TTATAGTCAAATCAACGAATCGATCGATCATTGTTCCATGTTTGTGACGA
GATTCTCTCGATATGCGCGCTTGTGCTGCATTTTTTTTGTGTGTGTGGCA
TGTATGTCCTCTTCTCAGGCGGACAAGGAGGTGGAGCTGGAAGAGGAGCT
GGCGCGAGGCGGGCTGCAGGACCGAAAGATGCTCATCGAGGAGTCCTTCC
TGCACGCCAACAGCCGAAAGCCGGTG

Coding sequence (CDS) from alignment at S-dermatodea_contig10668:41..2866+

>mRNA_S-dermatodea_contig10668.470.1 ID=mRNA_S-dermatodea_contig10668.470.1|Name=mRNA_S-dermatodea_contig10668.470.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=774bp|location=Sequence derived from alignment at S-dermatodea_contig10668:41..2866+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CAGCTCCACCACGAGCGGGACCTGGGGGTGCCCATCGATGTTATCGACCC
GCGAAACTATCTCTTGCCGAAGAAGCCGGTACCCTTGCCTAAGGAAGACG
AGGCCCTCATCAATTGGCGGGAGGGGGAATCCCGCGGCTCAGCAGCTCCA
CCACGAGCGGGACCTGGGGGTGCCCATCGATGTTATCGACCCGCGAAACT
ATCTCTTGCCGAAGAAGCCGGTACCCTTGCCTAAGGAAGACGAGGCCCTC
ATCAATTGGCGGGAGGGGGAATCCCGCGGCTCAGTGAAAAAGGAGGATCT
ATCGACATCGGCAAGACGCAAGGCAGTGGACACGTCAGTAACCTGGCTAA
AGAAGACGGTGTACCTCACGAACGACCCCTTCGATCCCGTCCACCAGTTC
AAGTCGGAGCAGCAGACGCAGTGAAAAAGGAGGATCTATCGACATCGGCA
AGACGCAAGGCAGTGGACACGTCAGTAACCTGGCTAAAGAAGACGGTGTA
CCTCACGAACGACCCCTTCGATCCCGTCCACCAGTTCAAGTCGGAGCAGC
AGACGCAGGCGGACAAGGAGGTGGAGCTGGAAGAGGAGCTGGCGCGAGGC
GGGCTGCAGGACCGAAAGATGCTCATCGAGGAGTCCTTCCTGCACGCCAA
CAGCCGAAAGCCGGTGGCGGACAAGGAGGTGGAGCTGGAAGAGGAGCTGG
CGCGAGGCGGGCTGCAGGACCGAAAGATGCTCATCGAGGAGTCCTTCCTG
CACGCCAACAGCCGAAAGCCGGTG