|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 666 |
| Cds size | 666 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10666.469.1 >prot_S-dermatodea_contig10666.469.1 ID=prot_S-dermatodea_contig10666.469.1|Name=mRNA_S-dermatodea_contig10666.469.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=222bp
LRRKSGRPGEAEELGARALRLVENAYGPVHPELATCLNNLSALLHARRRD
DEAEPLCRRALSMSEEIYGPHHPKIATCLNNLATQASICQVQARGEFEEA
EGYFVRALDIGRQVYGPTHPNVATGLSNLAGLLRCQGKLDEAEPLYRKAV
EIGEEVLGPNHPDLATWLNNLATLIRDKGDPAEAEPLQRRAVSIGERALG
PEHPDLGAQVINLASLLSAQG* back to topmRNA from alignment at S-dermatodea_contig10666:139..7751- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig10666.469.1 ID=mRNA_S-dermatodea_contig10666.469.1|Name=mRNA_S-dermatodea_contig10666.469.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=7613bp|location=Sequence derived from alignment at S-dermatodea_contig10666:139..7751- (Saccorhiza dermatodea SderLu1190fm monoicous)
CTGCGGCGCAAATCAGGTAGACCTGGGGAGGCGGAGGAGCTTGGCGCGCG
CGCGCTTAGGCTGGTGGAAAATGCGTACGGTCCCGTGCACCCCGAGCTGG
CGACGTGTCTCAACAACTTGAGCGCCTTGCTGCACGCGCGAAGGTAAGGA
TGATGGTTTTGACAGTTACCCACGTTCTTTGGTTGATTTGATTGATTTGA
TTTGCACACGTATAGCCGATCGGCTTAATCCGACCGACCCGACTTGTGGT
CAGACACGCAAAGAGTCAAGGAGAAAAGTAACTAATCGTAACATAACTCT
GCTTCTATTATACATCGTGCCTTCCCTGGTACTTTCTACGGTACAAGTTC
TTGCGGTGTCGGAAAGGTTGGTGGTGATGATGATGCTGGTGTAGGTGTGG
TGGTTGTACTGTATTAACCCTTTTGTGACTAAGGCTGTTTTCGGGTAACT
GTTTGCTATTATATTTAACCCTTTTGGGACTTAACCAGGCGACGAAGCCT
AGTTTCGGGTAACTGTTGGCTACCATAATAGCAAACAGTTACTCGATAAC
AGCCTTAGTCCCAAAACAAAAGGGTGCATAATGATAGCAAACAGTTACCC
GAAAGCAGCCTTAGTCCCAAAAGGGTTAATAGTAGGGATGGGTGTATGAT
GATGGTGGTGGTGTTGATATGATGGTGATGATGATGATGATGATGATGAT
GATGATGATGATGATGGTGATAATGATGGTGATGATGACGATGATGATGA
TGATGATGACGATGATGGTGATAACGATGATGATGATTAGTATGGTGGTG
GTGATGCTGATGGTGATGATGCTGATGGTAGCGATGATGATGATGATGGT
GATGATGATGAGAGAGAACGGAGCCGAAGGGAAACGGGGCTGTAGCTGTC
GACTGGCATCGATAAGCTGTTGGTCGTTTCGGAGAGCCCTATTGATTGTT
AATACTAATTTCATACTTCGAAGTACTACTGCTATTAATAGTACCAAAAG
GGTTAGAGCGATTTGGGATTGGTTTTCGTGCAAAATTTCTGTTGGATTCG
TGGTCCAAAATTTCCCATACAAATCGCGATCGATGGTCAACAGGGGTTGG
AGATCCATCCCACTTGCTCTTCTTGCTGTGCCTTCGCTTCGTGTCAGCAC
GAGCGGGATCGGTCAACGTTTTCGTTTGCAAGTAAAGGCGGTAAGAAAAA
ATTAAATATTTTTAGTTAACTGACTCCTAAGTTGGAGAAGGTAAAAAACG
AAAAAATAAATAGAACGAACTGTTGTTACTGGGCCGGGCCGGCCGATTGT
ATCATGATAAAAACACAAAATATAAAAAAAGTCTTATCTTCGTTATGATA
CCTCTCTCGGGAACAGCTCCTATACCCATGTATTTGCGCTCTCTGCAGTC
AACGGCGAGATCCCTTGCCCCTTACAAAAAAAATATATCAAAAAGGTGTG
GTGAGTTATGCTGCAATTGTGTGTACTATGTATATTCATATAGGTAATTC
CGTACTTTTTTTCTTTTTTTTTTCGATCTACTTGCGATTTTTTCTCATCT
GACCTCAAGCGGGATCGGCACTCCAACCATTGGTGACTGGCCGGCCGGTC
GGTCGGTCGGTCGGTCGGTTGTAAGCGTGGCAACCAATGAAAAAAAAAAA
AAAAAAATCGGGAAACAAAACAAATTCTCCGCTGTCCGCGGCGAAACACC
ATTACATCTTAGAACTAAAACAAACGTCAGGGCAGCACTGACCCATATGC
TTACCCTTGCCGTGCACCTTGCCGTGCAACGCGACGTGGGGTCGATCTGT
GGAAACTAAAGGACAGTGAAACACATCGGGAACCAACACGCTCCGCTGCC
CGCGGCGAAACGCAATTGTCTCGACAAAAACAAACATCAGGGCAGCACCG
ACCCATGCTCCCCCTCGCCGTGCAACGTCACCGGCTCCTGCCGCGAAATG
TGCATTTTCAGACGAGACGATGAGGCTGAGCCGCTCTGCCGGAGAGCTCT
ATCCATGTCGGAGGAGATTTATGGGCCTCACCACCCCAAGATCGCCACGT
GCCTGAACAACCTGGCCACCCAGGCGAGTATTTGCGTATGCAGCGAGGAT
GATTGATGATTTGTTTGATTAGATGTTTTCTCCTTGACTCTTTGGGTGTC
TGACCACAAGTCGGGTCGGATTAAGCCGATCGGCTATACGTGTGCAAATC
AACTTGATTGATTGATTGATTGGTTGATTGATTGAGTGATTGATTGATTG
ATTGATTGATTGATTACCGCACGTAGAGCCGATCGGCTTATTCCGACCTT
CCCGCCTACATACTGGTCAGATGCTCTATAGCGAAGTGTCAAGGAGAAAA
TATCTAGTCAGAAGTATAGCAATACCGTGCCTCGTGCTTGGTAGAGCACA
AGCGAGGATAAATATAATATTAGTGGTAACACCATGTATCTTATGAATTG
ATACACCAATGACCGATTGTGTCTATTGATTTTAGACAAGGATGCTGTCT
GATGCCAAACAACTTGATGTTTGCGTTGAGCGTTTGTTTTTTACATAAAA
GCGAAAACAACAGCAGCGACACGCACAGCAGGGATACGCACAGCAGCTCG
ACCGNNNNNNNNNNCGCGTTCGACCTCCGTGTCGCGTTCCGTCGGCATAT
CGTCCTGCCAACGCACACCTCACACGGGCGTAGCCTAGCCGTGGCTATTA
TACCCTATGTCATCATACCCACTATAATAGTATACTATTAATAGTATAGA
AAGCGCAGAAGAGGAATTGGAATTGGAATCGGAATCGGGCCATTCTCCCT
GGCCTCTCTACGGCCAGCTGTTGTTCTTCTACGAAGTATATGCTGTTTTT
GTTTAGTTTTTGTTGAATATGTTGGTGTTGATATTGTTATTGTTGATATC
TGCTGTTGTTGATATTCTCTCTTGTTGATATTTCGATTGCTGGTAATTTG
CTACTGTTGATACGACTATTGTTGATATTGCTATTTTTGATATTGCTATC
GTTGATATTGATATTTGTCGATATCAACTATATTGATAGTCCTGCTGTTG
TTATGTTCTTATAATTGTTGCTATTTTTTCTTTTCACCCCCCCCCCCACT
GAGCTAAAAAATGCTTAGAAATAGGTGTTATACATGATACTTGTCTGTAA
CCATTTTTGTTTTTAATCTAAAACATATGTAAAGATGCACCTTAGATATG
TAATGATTTTTATGGTATTTTTAATGAAGAATGATAGCCCCCACCCTCCT
TTTGTTTTTCTTACTCACACGCTTATGCGGTGCGTTCCGTTATGCCTCTA
TCTATAGAGCTCAATGCCTTTATTTGGCTGATACCGGCCCTCGGCACCTT
TTATACGGCCTCCCGCTCCGCATGCCCAGATCTAACTCCGGCTGACGAAG
CTCCCATCTAATCAAAATAAAGTATGATGAAGTACGTGATACATGTAGAA
GCAACGGAGACAACAACCAGTGTCCTCTGCCGCCACTAAGCGTTTTTTTT
TTTTGTCATTTGTTCCCATTTCTGTTTTTGTTTTTTTCGTTTTTTTGTCT
TTTCTTCATTTTTTTCGTTCTCTTTTTTTCTTTCCATTTTTTTGTGCGTG
CTGTCTGTGCTGAGCAGGTCCAGGCGAGGGGGGAGTTCGAGGAGGCGGAG
GGGTACTTTGTGAGGGCCCTAGACATCGGCAGGCAGGTTTACGGCCCGAC
CCATCCGAACGTGGCAACTGGCCTCTCCAACCTCGCCGGGCTTCTTCGCT
GCCAGGGTAAGGTGTCCATGTGCGTACTGTTGATTGATTGGTTGATTGAT
TTTCACACGTATAGCCGATCGGATTAATCCGACCCGACTTGTGGTCAGAT
GCTATAGCAAAGAGTCAAGGAGAAAAATAACTAATCAGAACCCCCTCGCC
TGTTACTTACAGTACTATGGTACAAGAAATAAGAAATAGTACCCCAGATT
GTAAAGGAACCTTATCCTCGGCGATGTAGGATGGTGGTTACCTGTGGGTC
TTCTAAACTCTCACTCACGCTATTGCGGAGGTACACAGTAATAGTAGTAT
TATAGCAATACGTCCCCGAGTGCATAACGCCTACCCAACGCTGTGATGAT
TTTTGAAAATTGCATTTATTCGACGGCGGAGAGAGAGCGCACTTAGCAGA
CACAAATATTTAGTCGTTTTGGCAAACACGACCGCCAATGGCCCAGACAG
CAGATCGTCTTCTTCGGAATTTTGAACTTTTGGTTCCAGAATTTTCGAAA
AATGGGCAAAACAAAAACACAAATGCCTATCGTATTGTTTGGATCTTGCC
TTTTGCTATATAGCGGGGATAGAGACACTAGTGACGACCAAATATCCCAA
AAATTATACCTGGTACCTAGCATAGCTTAACCAGGTATGAGTCTTGTATG
GCCTTACAAGGTCAATACAAAATAAAAAAGATTGAAAAATAACTCCGGCC
AAGACTCAAATGACTGTGTACGTAATTTAGCCGAAAGTTAATATTGAGTA
TGATAGAATATATATACATTCGAGTCTTGCCTGGGAGGACGATTGAAGAT
ATTCTAGAGCTCTAAGGCCGGGCTGACTTTTTCAGATGTTTCAACGACGG
GTCAGTAAACGGATCAATCAATCGACCCATCAATCGATCAATCAATCAAT
CAATCAATCAATCAATCAATCAAACTAATATATCTAATCTGTGACCACAA
TCACCACCACCATCATCATCATCGTTTGCAAATGAAAATTAGCATGAAAT
GAACACGCGCACGCATACCAAATCATGAAATCATCACCACGTCCGTTTTG
TGGGATATATAGTCCGTGTGTGCCTTCTGTACCTTCTGTGCCTGCTGTGC
CTTCTGTACCTTCTGTACCTTCTGTACCTTCTGTACCTTCTGTACCTTCT
GTACCTCCTGTACCTTCTGTACCTTCTGTACCTTCTATATATTATGTACC
TTCTGCACCTTCTGTACCTTCTGTACCATCTGTACCTTCTGTACCTTATG
TAGCTTCTGTCCCTTTTTTACGACCACGAGCGGGGTCGGAGTGGACAGGC
CGATTGGCTGCAAGCGTGTGACAAACCGATCAACGAATGAATGAATGAAT
CAACCAACCGATAATTCTATCAATAAATATATCACATAATTTACCAATCA
ACCAACAAATCAATGGATACATCAACCAATCAATCAACCAATCAACCAAT
CAACCAATAAATGAATGAATCAATCAATCAATAATTCCATTGCTAAATCA
ACCAACCGATCAATCAACCAGCCAATGATTCAGTCAATGAATATATCACT
AAAATCATCAATCAACCAGCGAATAAATCAATCAACCAATGAACCAACCA
ACCAGTAACGAATGAATGGATTGTGATGAATGAATGAATATATGAATAAA
TGAATCAAGCAATTAATAAATGAGCCAAACTACCAATCAATCACCCAACC
AACCAGCCAATCAATCAATTACTCACTAAAATCATCAATCAACCAACCAA
TCAAATACCCAACCAACCAGTAAACGAATGACTGGATTATGATGATTGAA
TGAGTGCATAGATGAATGAACGAACCAGCCAACCAATCAACCAATCAAGC
AAGCAATAAATCAAAATCTATTAAGCAATCAACCACCCAACCAACCAATA
ATTCAGTCAATGAATATACAGTACCACTTAAATCATCAACCAACCAATCA
ATCGATCACTGAATGAATCGACCAACCAATCAATCAGTCAACCAACCAAT
AATCCAATCAACCAAAAACATAACTCTTAAAATCAATCAACCAATCAACC
AATAAATCGACGTGTGAATGCATGAATGAATTAATGAATTAATATATACA
TAGATGAATGAATGAATGAATCACTCCATAAATCAATCAGTCGTCAATCA
ATAACTCAATCAGCAAATCAACCAACCAACCAACCAATCAATCAATCAAT
CACCCAATCAATCAATCAATCAACCAATCAATCAATCAATTAATCAATCA
GCCAATAAATCAACTAACCAATCGGTCAATCAATCAACCACAACCGACTA
GTCAATCAACCAATCAATCAATCAATCAATTAATCAATCAGCCAATCAAT
TAATCAATCAGCCGATTAATCAACCAACCAATCAACCTATCAATCACCCA
TTCAATCATGAATGAAACCAATCAATCCATCAATCAATCAATTAATCAAT
CAGCCAATGAATCTACCAACCAATCGGTCCATCAATCAACCACAACCAAC
TAATCAATCAACCAATCAATCAATCAATCAATCACTTAATCAAGCACCCA
ATAAATCAACCAACCAATCGGTCATTCAATCAACCACAACCAATTATTCA
ATCAACCAATCAATCAATCAATCAATCAATTATTCAATCAGCCAGTAAAT
CAACCAACGAATCGGTCAATCAATCAACCACAACCAACTAGTCAATCAAT
CAACCAATCAATCAATCAATCAATTAATCAATCAGCCAGTAAATCAACCA
ACCAATCGGTCAATCAATCAACCACAATCAGCCAATAAAGCAACGAACCA
ATTGAGCAATCAATCAACCACAACCAACTAATCAATCAACCAATCAATCA
ATCAATCAATAATCAGCCAACCAATCGGTCAATCAATCAACCACAGCCAA
CTAATCAACCAACCAACCACTCAATCAATCAAGTAATCAATCAGCCAAAT
AAATCAACCAACCAATCGGTCAATCAATCACTCACAACCAACTAATCAAT
CAATCAACCAATCAACCAATCAACCAATCAACCAAGAATTCAATCAGCAA
GTAAATCTACCAACCAATCGGTCAATCAATCAACCACAACCAACTAATCA
ATCAAGCAACCAATCAATCAATCAATCAATTAATCAATCAGCCAATAAAT
CAACTAACCAATCGGTCAATCAATCAACCACAACCGACTAATCAATCAAC
CAATCAATCAATCAATCAATTCATCAATCAGCCGATAAATCAACCAACCA
ATCAACTATCAATCAACCACAACCAACAAATTAATCAATCAACCAATCAA
TCAATCAATCAATCAATTAATCAATCAGCCGATAAATCAACCAACCAATC
AACCTATCAATCAATTAATCAATCAGCCAATAAAGCAACCAACCAGTTGG
TCAATCAATCAACCAATCAATCAATCAATCAATTAATCAATCACCCTATA
AATCAACCAACCAATCGGTCAATCAGCCAACCACAACCAACTAATTAATC
AATCAACCTACCAATCAACCTATCAATCAATTAATCAATCAGCCAGTAAA
TCAACCAACCAACGAACCAAACGACCATCGATTCCCAACACGCTCCCCCG
AAACAGGAAAGCTGGACGAAGCCGAGCCTCTCTACCGTAAGGCCGTCGAG
ATAGGGGAAGAAGTCCTAGGCCCCAATCACCCAGACCTTGCCACATGGCT
CAACAACCTCGCCACCCTAATCAGGGACAAGGGAGACCCTGCCGAAGCCG
AGCCTCTGCAGCGGCGGGCAGTATCGATCGGGGAACGAGCGCTCGGACCT
GAGCACCCTGACCTTGGTGCGCAGGTTATCAACCTGGCTTCGCTGCTGAG
CGCTCAAGGTTAG back to topCoding sequence (CDS) from alignment at S-dermatodea_contig10666:139..7751- >mRNA_S-dermatodea_contig10666.469.1 ID=mRNA_S-dermatodea_contig10666.469.1|Name=mRNA_S-dermatodea_contig10666.469.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1332bp|location=Sequence derived from alignment at S-dermatodea_contig10666:139..7751- (Saccorhiza dermatodea SderLu1190fm monoicous)
CTGCGGCGCAAATCAGGTAGACCTGGGGAGGCGGAGGAGCTTGGCGCGCG
CGCGCTTAGGCTGGTGGAAAATGCGTACGGTCCCGTGCACCCCGAGCTGG
CGACGTGTCTCAACAACTTGAGCGCCTTGCTGCACGCGCGAAGCTGCGGC
GCAAATCAGGTAGACCTGGGGAGGCGGAGGAGCTTGGCGCGCGCGCGCTT
AGGCTGGTGGAAAATGCGTACGGTCCCGTGCACCCCGAGCTGGCGACGTG
TCTCAACAACTTGAGCGCCTTGCTGCACGCGCGAAGACGAGACGATGAGG
CTGAGCCGCTCTGCCGGAGAGCTCTATCCATGTCGGAGGAGATTTATGGG
CCTCACCACCCCAAGATCGCCACGTGCCTGAACAACCTGGCCACCCAGGC
GAGTATTTGCACGAGACGATGAGGCTGAGCCGCTCTGCCGGAGAGCTCTA
TCCATGTCGGAGGAGATTTATGGGCCTCACCACCCCAAGATCGCCACGTG
CCTGAACAACCTGGCCACCCAGGCGAGTATTTGCCAGGTCCAGGCGAGGG
GGGAGTTCGAGGAGGCGGAGGGGTACTTTGTGAGGGCCCTAGACATCGGC
AGGCAGGTTTACGGCCCGACCCATCCGAACGTGGCAACTGGCCTCTCCAA
CCTCGCCGGGCTTCTTCGCTGCCAGGGTAAGCAGGTCCAGGCGAGGGGGG
AGTTCGAGGAGGCGGAGGGGTACTTTGTGAGGGCCCTAGACATCGGCAGG
CAGGTTTACGGCCCGACCCATCCGAACGTGGCAACTGGCCTCTCCAACCT
CGCCGGGCTTCTTCGCTGCCAGGGTAAGCTGGACGAAGCCGAGCCTCTCT
ACCGTAAGGCCGTCGAGATAGGGGAAGAAGTCCTAGGCCCCAATCACCCA
GACCTTGCCACATGGCTCAACAACCTCGCCACCCTAATCAGGGACAAGGG
AGACCCTGCCGAAGCCGAGCCTCTGCAGCGGCGGGCAGTATCGATCGGGG
AACGAGCGCTCGGACCTGAGCACCCTGACCTTGGTGCGCAGGTTATCAAC
CTGGCTTCGCTGCTGAGCGCTCAAGGTTAGCTGGACGAAGCCGAGCCTCT
CTACCGTAAGGCCGTCGAGATAGGGGAAGAAGTCCTAGGCCCCAATCACC
CAGACCTTGCCACATGGCTCAACAACCTCGCCACCCTAATCAGGGACAAG
GGAGACCCTGCCGAAGCCGAGCCTCTGCAGCGGCGGGCAGTATCGATCGG
GGAACGAGCGCTCGGACCTGAGCACCCTGACCTTGGTGCGCAGGTTATCA
ACCTGGCTTCGCTGCTGAGCGCTCAAGGTTAG back to top
|