mRNA_S-dermatodea_contig10655.457.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10655.457.1 vs. uniprot
Match: D8LDW6_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDW6_ECTSI) HSP 1 Score: 137 bits (344), Expect = 4.410e-38 Identity = 65/120 (54.17%), Postives = 87/120 (72.50%), Query Frame = 1
Query: 1 TQMIYVLEGDLLRTGFVEELGGGRVIVNDLSKGDATFFPQGLIHYQQNLACDNATFVASLDSVDPGVVFIASGFFQLPTEAIQAAVDFDALPQDVIETFVAGLPTAPMNARRKCLVECGL 360
T+M YV+ G+ LR FVEE GG +VNDLS+GD TFFPQGLIHY+QNL C+ TF+A+L++ DPG V I + FF+LP+EAIQA+++F+ ++ + LP AP ARR+CL CGL
Sbjct: 98 TEMQYVINGEHLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPSEAIQASLNFE---DPALQRLIESLPDAPAAARRQCLERCGL 214
BLAST of mRNA_S-dermatodea_contig10655.457.1 vs. uniprot
Match: A0A6H5JV79_9PHAE (Cupin type-1 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JV79_9PHAE) HSP 1 Score: 136 bits (343), Expect = 7.530e-38 Identity = 63/118 (53.39%), Postives = 88/118 (74.58%), Query Frame = 1
Query: 1 TQMIYVLEGDLLRTGFVEELGGGRVIVNDLSKGDATFFPQGLIHYQQNLACDNATFVASLDSVDPGVVFIASGFFQLPTEAIQAAVDFDALPQDVIETFVAGLPTAPMNARRKCLVEC 354
T+M+YV++G+ LR FVEE GG +VNDL++GD FFPQGLIHYQQNL C+ ATF+A+L++ DPG + I + FF+LP EAIQA+V+F+ + V++ + LP AP AR++CL C
Sbjct: 97 TEMVYVIKGEQLRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNEDPGAITITTRFFELPLEAIQASVNFE---EPVLQNLIESLPDAPAAARQQCLQRC 211
BLAST of mRNA_S-dermatodea_contig10655.457.1 vs. uniprot
Match: A0A0L0GAB9_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GAB9_9EUKA) HSP 1 Score: 110 bits (274), Expect = 9.050e-28 Identity = 60/124 (48.39%), Postives = 77/124 (62.10%), Query Frame = 1
Query: 1 TQMIYVLEGDLLRTGFVEELGGGRVIVNDLSKGDATFFPQGLIHYQQNLACDNATFVASLDSVDPGVVFIASGFFQLPTEAIQAAVDFDALPQDVIETFVA----GLPTAPMNARRKCLVECGL 360
T+ Y++EG+L GFV E GR ++ND+ +TFFPQGL+HYQQN+ C+ A F++ LDS DPG++ IA+ LP EAI AA D D E FVA GLP P R +CLV CGL
Sbjct: 87 TESAYMIEGELT-VGFVME--SGRTVINDIKADQSTFFPQGLLHYQQNMGCEPAGFISILDSSDPGLLVIAAAVAGLPEEAIAAAFDED-------EAFVAQMRMGLPKVPARGRAECLVRCGL 200
BLAST of mRNA_S-dermatodea_contig10655.457.1 vs. uniprot
Match: A0A0L0FUE8_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FUE8_9EUKA) HSP 1 Score: 110 bits (275), Expect = 4.380e-27 Identity = 55/120 (45.83%), Postives = 78/120 (65.00%), Query Frame = 1
Query: 1 TQMIYVLEGDLLRTGFVEELGGGRVIVNDLSKGDATFFPQGLIHYQQNLACDNATFVASLDSVDPGVVFIASGFFQLPTEAIQAAVDFDALPQDVIETFVAGLPTAPMNARRKCLVECGL 360
T+ +Y++EG L GFV E GGR+I+ND+ +TFFPQGL+HYQQN+AC+ A F++ L+S DPG++ I + +LP+EA++A D DA + GLP P R +CL CGL
Sbjct: 180 TESVYIIEG-ALTVGFVTE--GGRLILNDVKTDQSTFFPQGLLHYQQNMACEPAGFISILNSSDPGLLVIPAALAELPSEALEATFDEDAA---FVNQLRIGLPAGPARGRAECLRRCGL 293
BLAST of mRNA_S-dermatodea_contig10655.457.1 vs. uniprot
Match: A0A0L0FML7_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FML7_9EUKA) HSP 1 Score: 102 bits (253), Expect = 2.540e-25 Identity = 51/120 (42.50%), Postives = 73/120 (60.83%), Query Frame = 1
Query: 1 TQMIYVLEGDLLRTGFVEELGGGRVIVNDLSKGDATFFPQGLIHYQQNLACDNATFVASLDSVDPGVVFIASGFFQLPTEAIQAAVDFDALPQDVIETFVAGLPTAPMNARRKCLVECGL 360
T+ IYV+ +L GFV E R+++ND+ +TFFPQGL+HYQQN+ C+ A+F++ LDS DPG+ IA+ LP EA++A +D D + GLP P AR +CL C +
Sbjct: 23 TETIYVVNA-MLTVGFVAE--SSRLVLNDIETDQSTFFPQGLLHYQQNMNCEPASFISILDSADPGLSVIAAALTALPDEALKAVLDEDV---SFVTQLRLGLPAGPARARSECLARCSM 136
BLAST of mRNA_S-dermatodea_contig10655.457.1 vs. uniprot
Match: A0A0L0FDT9_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FDT9_9EUKA) HSP 1 Score: 104 bits (260), Expect = 4.630e-25 Identity = 52/120 (43.33%), Postives = 75/120 (62.50%), Query Frame = 1
Query: 1 TQMIYVLEGDLLRTGFVEELGGGRVIVNDLSKGDATFFPQGLIHYQQNLACDNATFVASLDSVDPGVVFIASGFFQLPTEAIQAAVDFDALPQDVIETFVAGLPTAPMNARRKCLVECGL 360
T+ IY++EG L GFV E GR+I ND+ +TFFP+GLIHYQQN+ C+ A +++ LD D G++ ++ LP+EA++A D DA + + + GLPT P R +C V CGL
Sbjct: 152 TESIYIIEG-ALTVGFVTE--SGRLITNDVIVDQSTFFPRGLIHYQQNMGCEPAGYISMLDDSDAGLLVVSGVLGNLPSEALEATFDEDA---EFVNQLLMGLPTGPARGRAECFVRCGL 265
BLAST of mRNA_S-dermatodea_contig10655.457.1 vs. uniprot
Match: A0A0L0FU70_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FU70_9EUKA) HSP 1 Score: 104 bits (260), Expect = 4.870e-24 Identity = 54/120 (45.00%), Postives = 73/120 (60.83%), Query Frame = 1
Query: 1 TQMIYVLEGDLLRTGFVEELGGGRVIVNDLSKGDATFFPQGLIHYQQNLACDNATFVASLDSVDPGVVFIASGFFQLPTEAIQAAVDFDALPQDVIETFVAGLPTAPMNARRKCLVECGL 360
T+ +YV++G +L GFV E GR+++ND+ K TFFP+GL+HYQQN+ C A F++ LD+ DPGV+ I LP EA+ A D Q+ I GLP P AR +CL CGL
Sbjct: 292 TESLYVIDG-MLTVGFVAE--SGRLVLNDIEKDQTTFFPKGLMHYQQNMQCVPANFISILDTCDPGVLVITESLNALPDEALTATFGED---QEFINQLRLGLPDGPARARSECLKRCGL 405
BLAST of mRNA_S-dermatodea_contig10655.457.1 vs. uniprot
Match: A0A507FDZ0_9FUNG (Cupin type-1 domain-containing protein n=2 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FDZ0_9FUNG) HSP 1 Score: 94.7 bits (234), Expect = 2.080e-21 Identity = 51/119 (42.86%), Postives = 73/119 (61.34%), Query Frame = 1
Query: 1 TQMIYVLEGDLLRTGFVEELGGGRVIVNDLSKGDATFFPQGLIHYQQNLACDNATFVASLDSVDPGVVFIASGFFQLPTEAIQAAVDFDALPQDVIETFVAGLPTAPMNARRKCLVECG 357
++ IYV++G++ + GF+EE G +VIVNDL +G ATF PQG IHYQ NL C+ A +A+ ++ DPG + I + FF+LP AI A++ P+ I LP P +CL CG
Sbjct: 107 SEAIYVIQGNV-QVGFIEE-NGAKVIVNDLVQGQATFIPQGSIHYQVNLGCEQAVMIAANNNEDPGTLTIPAQFFKLPDGAIAASLGGTLDPE--IRALNGSLPMNPAPGVEECLRRCG 221
BLAST of mRNA_S-dermatodea_contig10655.457.1 vs. uniprot
Match: A0A815LD24_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A815LD24_9BILA) HSP 1 Score: 90.1 bits (222), Expect = 1.880e-19 Identity = 48/120 (40.00%), Postives = 66/120 (55.00%), Query Frame = 1
Query: 1 TQMIYVLEGDLLRTGFVEELGGGRVIVNDLSKGDATFFPQGLIHYQQNLACDNATFVASLDSVDPGVVFIASGFFQLPTEAIQAAVDFDALPQDVIETFVAGLPTAPMNARRKCLVECGL 360
T M V +GD +RTGF E G+ +V L + T FPQG +H++QNL+C A FVA +SVDPG+ +S FFQLP + I A+++ + LP AP+ C CGL
Sbjct: 156 TSMFVVTQGDNVRTGFYNE-HTGKFVVTPLKQYQGTVFPQGALHFEQNLSCKQAVFVAGFNSVDPGLNSGSSTFFQLPIDLIAASLNITTAQATSLRDH---LPAAPLQTVASCRARCGL 271
BLAST of mRNA_S-dermatodea_contig10655.457.1 vs. uniprot
Match: A0A815GW40_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A815GW40_9BILA) HSP 1 Score: 90.9 bits (224), Expect = 2.530e-19 Identity = 45/120 (37.50%), Postives = 72/120 (60.00%), Query Frame = 1
Query: 1 TQMIYVLEGDLLRTGFVEELGGGRVIVNDLSKGDATFFPQGLIHYQQNLACDNATFVASLDSVDPGVVFIASGFFQLPTEAIQAAVDFDALPQDVIETFVAGLPTAPMNARRKCLVECGL 360
T++ Y +GD +TGF +E GG+ + + + +G + FPQG IH++QN+ C+ A FVA+ D DPG + IA GFF LPT+ + A++ + +D + + LP +CL+ CGL
Sbjct: 210 TEINYAAKGDF-QTGFFQE-NGGKFVGHIVREGQVSVFPQGAIHFEQNMGCETAMFVAAFDHEDPGTLTIADGFFSLPTDILAASLG--GISEDDVMRLGSNLPKNAGFGTEECLIRCGL 325 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10655.457.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10655.457.1 >prot_S-dermatodea_contig10655.457.1 ID=prot_S-dermatodea_contig10655.457.1|Name=mRNA_S-dermatodea_contig10655.457.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=118bp MIYVLEGDLLRTGFVEELGGGRVIVNDLSKGDATFFPQGLIHYQQNLACDback to top mRNA from alignment at S-dermatodea_contig10655:2889..3658- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10655.457.1 ID=mRNA_S-dermatodea_contig10655.457.1|Name=mRNA_S-dermatodea_contig10655.457.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=770bp|location=Sequence derived from alignment at S-dermatodea_contig10655:2889..3658- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10655:2889..3658- >mRNA_S-dermatodea_contig10655.457.1 ID=mRNA_S-dermatodea_contig10655.457.1|Name=mRNA_S-dermatodea_contig10655.457.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=708bp|location=Sequence derived from alignment at S-dermatodea_contig10655:2889..3658- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |