mRNA_S-dermatodea_contig10641.449.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig10641.449.1
Unique NamemRNA_S-dermatodea_contig10641.449.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig10641.449.1 vs. uniprot
Match: A0A6H5K7A9_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7A9_9PHAE)

HSP 1 Score: 367 bits (942), Expect = 6.690e-116
Identity = 217/375 (57.87%), Postives = 249/375 (66.40%), Query Frame = 1
Query:   13 GSTSTVLKVVDVDTLRVVAVKEMTVCDSKQTAVLRHELRVLHPQLQPLIPSKTAR-RGRRSRGPTXXXXXXXXXXPASRGSSADNTCGDGGVTGIAAGAGAGGKGRRGGGS---------------PCPFMPSYFGSFVSQDELGRPRVSIVLEHIPGVDLACWIEETGSRRSGASGAGXXXXXXXXXDAKGLRWHHP---------------PETWLARVCRDMLEALRYLHDRRCIHRDVKPANLLLGPGGAKLADFGSTVS--EDESSGHRMHGTIRFMSPERLSARPYRPGSDLWAAGLTVASAALGENPIPHCSTEFEAVEHAEAAFDMVAAHPGASALSPALLDFLKNVLVADPEKRPTVEEMLRHPFV 1038
            GS+STV KVVD++TLRVVAVKEM VCDSKQ  +LRHEL VLHPQLQPL+P K  R  GRRSR              AS G++                A   GK   GGG                PCP+MP Y+GSFVS D+ GRPRVSIV+E++ GVDLA WIEE G    G+SG G     XXXX                         PE WL+RVCRD+LEALRYLH+R  IHRDVKPAN+LLGPGGA+L DFGST+   EDE  G RMHGT+RFMSPERL ARPY P SDLWAAGLTVASAALGENP+PH +T+FEA  HAE AF+MV +HP ++ LSP+LLDFL+ VLVADPE+RPTVE+ML HPFV
Sbjct:   73 GSSSTVWKVVDIETLRVVAVKEMIVCDSKQGTILRHELSVLHPQLQPLVPPKPKRLSGRRSRASAAPISGAGAGDAASSGTNTPTIAXX--XXXXXXSARRSGKKSLGGGKSVAAASTSAPVVRPGPCPYMPRYYGSFVSHDDGGRPRVSIVMEYVSGVDLARWIEEVG----GSSGDGEGRREXXXXXXXXXXXXXXXXXXXXXXXXXRPPIPELWLSRVCRDILEALRYLHERGFIHRDVKPANVLLGPGGARLVDFGSTIDGREDECGG-RMHGTVRFMSPERLCARPYWPSSDLWAAGLTVASAALGENPVPHSATKFEAAGHAEVAFEMVRSHPASAGLSPSLLDFLRAVLVADPERRPTVEQMLAHPFV 440          
BLAST of mRNA_S-dermatodea_contig10641.449.1 vs. uniprot
Match: D7FS87_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS87_ECTSI)

HSP 1 Score: 351 bits (901), Expect = 1.980e-115
Identity = 208/379 (54.88%), Postives = 239/379 (63.06%), Query Frame = 1
Query:    1 FFLSGSTSTVLKVVDVDTLRVVAVKEMTVCDSKQTAVLRHELRVLHPQLQPLIPSK----TARRGRRSRGPTXXXXXXXXXXPASRGSSADNTCGDGGVTGIAAGAGAGGKG--------RRGGGSPCPFMPSYFGSFVSQDELGRPRVSIVLEHIPGVDLACWIEETGSRRSGASGAGXXXXXXXXXDAKGLRWHHP--------------------PETWLARVCRDMLEALRYLHDRRCIHRDVKPANLLLGPGGAKLADFGSTVSEDESS-GHRMHGTIRFMSPERLSARPYRPGSDLWAAGLTVASAALGENPIPHCSTEFEAVEHAEAAFDMVAAHPGASALSPALLDFLKNVLVADPEKRPTVEEMLRHPFV 1038
            F   GSTSTV KVVD++TLRVVAVKEM VCDSKQ  +LRHEL VLHPQLQPL+P K    + RR R S  P           P                                     R G   PCP+MP Y+GSFVS D+ GRPRVSIV+E++ GVDLA WIEE G    G+SG G      XXX                              PE WL RVCRDMLEALRYLH+R  IHRDVKPAN+LLGPGGA+L DFGST+ + E   G RMHGT+RFMSPERL ARPYRP SDLWAAGLTVASAALGENP+PH + +FEA  HAE AF+MV +HP ++ LSP+LLDFL+ VLVADPE+RPTVE+ML HP++
Sbjct:   68 FLGRGSTSTVWKVVDIETLRVVAVKEMIVCDSKQGTILRHELSVLHPQLQPLVPPKPKRLSGRRSRASAAPVGDAASSGTNTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVVRPG---PCPYMPRYYGSFVSHDDGGRPRVSIVMEYVSGVDLARWIEEVG----GSSGEGEGRREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPPIPEMWLPRVCRDMLEALRYLHERGFIHRDVKPANVLLGPGGARLVDFGSTIDDREDECGGRMHGTVRFMSPERLCARPYRPSSDLWAAGLTVASAALGENPVPHSANKFEAAGHAEVAFEMVRSHPASAGLSPSLLDFLRAVLVADPERRPTVEQMLAHPYL 439          
BLAST of mRNA_S-dermatodea_contig10641.449.1 vs. uniprot
Match: A0A835YL65_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL65_9STRA)

HSP 1 Score: 105 bits (262), Expect = 1.310e-22
Identity = 64/163 (39.26%), Postives = 92/163 (56.44%), Query Frame = 1
Query:  571 LARVCRDMLEALRYLHDRRCIHRDVKPANLLLGPGGA-KLADFG-----STVSEDESSGHRMHGTIRFMSPERLSARPYRPGSDLWAAGLTVASAALGENPIPHCSTEFEAVEHAEAAFDMVAAHP-GASALSPALLDFLKNVLVADPEKRPTVEEMLRHPFV 1038
            LA V RD L  L  +H    +HRD+KP+N+LL   GA KLADFG     +    + ++ H   GT  +MSPERL    Y   SD+W+ GL++ + ALG  P+         V  +   + ++ A P  A+ +SP L DFL+  L  DP +RP+VE++L HPF+
Sbjct:  129 LASVARDALRGLASIHRLGLLHRDIKPSNMLLDARGAVKLADFGLVREAAAADLEAATAHTFVGTAVYMSPERLRGEEYSFSSDVWSLGLSLLTLALGRFPLN--------VPKSNLYWHLMKALPENAAGMSPCLRDFLRGTLHRDPARRPSVEQLLAHPFL 283          
BLAST of mRNA_S-dermatodea_contig10641.449.1 vs. uniprot
Match: A0A0S4IQX7_BODSA (Protein kinase, putative n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4IQX7_BODSA)

HSP 1 Score: 107 bits (267), Expect = 1.330e-22
Identity = 66/173 (38.15%), Postives = 93/173 (53.76%), Query Frame = 1
Query:  559 PETWLARVCRDMLEALRYLHD-RRCIHRDVKPANLLLGP--GGAKLADFG--STVSEDESSGHRMHGTIRFMSPERLSARPYRPGSDLWAAGLTVASAALGENPIPHCSTEFEAVE--------HAEAAFDMVAAHPGASALSPALLDFLKNVLVADPEKRPTVEEMLRHPFV 1038
            P+  LA V RD+L  L+YLH  RR IHRD+KP N+L     G AK++DFG  S + +   S H   GT+ +MSPERL    Y    D+W+ G++VA  ALG +P  H +   ++ E        H      ++A     S  +P L  F+   L  D   RPT+ E+L+HPF+
Sbjct:  161 PDAALASVSRDVLLGLQYLHQQRRLIHRDMKPGNVLYNATTGCAKISDFGVSSALDQHNESAHTFVGTVTYMSPERLRGESYSFEGDVWSWGISVAELALGAHPYSHLTNPGDSTETKFWVLMQHLNGDGPVIALP---STFNPLLAAFIHACLTKDAATRPTIAELLKHPFI 330          
BLAST of mRNA_S-dermatodea_contig10641.449.1 vs. uniprot
Match: A0A2P6V9N1_9CHLO (Mitogen-activated kinase kinase 3 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V9N1_9CHLO)

HSP 1 Score: 107 bits (267), Expect = 4.440e-22
Identity = 71/235 (30.21%), Postives = 111/235 (47.23%), Query Frame = 1
Query:  343 PCPFMPSYFGSFVSQDELGRPRVSIVLEHIPGVDLACWIEETGSRRSGASGAGXXXXXXXXXDAKGLRWHHPPETWLARVCRDMLEALRYLHDRRCIHRDVKPANLLLGPGGA-KLADFGSTVSEDESSG--HRMHGTIRFMSPERLSARPYRPGSDLWAAGLTVASAALGENPIPHCSTEFEAVEHAEAAFDMVAAHPGASALSPALLDFLKNVLVADPEKRPTVEEMLRHPFV 1038
            P   +  ++G++ S D   R ++++VLE++ G  L+  +                            R    PE  LA +    L AL Y+H  R +HRD+KPAN+L+   G  K++DFG +   D +    +   GT+ +MSPERL+  PY   +D+WA GL +   A G+ P         A++      +     P     SP L DF+   +  DP KRP+ E+++RHPFV
Sbjct:  148 PLDGLIRFYGAYHSAD---RGQIAVVLEYMDGGSLSDLV---------------------------ARVKQVPEPVLAAIAARTLPALAYMHSHRMVHRDIKPANILINTEGQPKVSDFGISAFMDTTIAQCNTFLGTVTYMSPERLAGEPYSFSADIWALGLALLECATGKYPY---DASGGAIQLMMQLMEEECPLPPDGQCSPELRDFVAQCMRRDPWKRPSAEQLMRHPFV 349          
BLAST of mRNA_S-dermatodea_contig10641.449.1 vs. uniprot
Match: A0A2I0B120_9ASPA (Mitogen-activated protein kinase kinase kinase YODA n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0B120_9ASPA)

HSP 1 Score: 104 bits (260), Expect = 1.570e-21
Identity = 79/232 (34.05%), Postives = 109/232 (46.98%), Query Frame = 1
Query:  346 CPFMPSYFGSFVSQDELGRPRV-SIVLEHIPGVDLACWIEETGSRRSGASGAGXXXXXXXXXDAKGLRWHHPPETWLARVCRDMLEALRYLHDRRCIHRDVKPANLLLGPGGAKLADFGSTVSEDESSGHRMHGTIRFMSPERLSARPYRPGSDLWAAGLTVASAALGENPIPHCSTEFEAVEHAEAAFDMVAAHPGASALSPALLDFLKNVLVADPEKRPTVEEMLRHPFV 1038
            CP +   FG  VS++  G PR+ ++ LE+  G D+   I  +G                      GL     PE  + R  R +LE LR++H R  +H D+KP N+LL  G AK+ADFG +  E       + GT  +M+PE L  + Y   +D+WA G T A    G  P P   TE  AV     + + +   P   A+S    DFL    V DP +R T E +L HPFV
Sbjct:   56 CPHIIGCFGHQVSEEPSGEPRLYNLFLEYAGGGDIYGLIRSSG----------------------GL-----PEEAVRRHVRSILEGLRHIHARGYVHCDIKPQNILLVGGEAKIADFGLSNGE-------IRGTPLYMAPEALLRKEYEAPADIWALGCTAAEMFSGRRPWPE--TEVCAVIRRIGSSEEMPEIP--PAMSAEGKDFLSRCFVKDPRERWTAEMLLSHPFV 249          
BLAST of mRNA_S-dermatodea_contig10641.449.1 vs. uniprot
Match: A0A1X6NJC2_PORUM (Protein kinase domain-containing protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJC2_PORUM)

HSP 1 Score: 100 bits (250), Expect = 4.880e-21
Identity = 76/233 (32.62%), Postives = 107/233 (45.92%), Query Frame = 1
Query:  349 PFMPSYFGSFVSQDELGRPRVSIVLEHIPGVDLACWIEETGSRRSGASGAGXXXXXXXXXDAKGLRWHHPPETWLARVCRDMLEALRYLHDRRCIHRDVKPANLLLGPGGA-KLADFGSTV--SEDESSGHRMHGTIRFMSPERLSARPYRPGSDLWAAGLTVASAALGENPIPHCSTEFEAVEHAEAAFDMVAAHPGASALSPALLDFLKNVLVADPEKRPTVEEMLRHPFV 1038
            P +  Y G F   DE G   +S+V+E++ G  LA  + + G                             PE  +A + R +++ L YLH R  IHRDVKPAN+L+   G  K+ DFG +   S    SG  + GT  +++PE +  RPY    D+W+ G TV   A G  P  H  T   A+     A       P    LSPA  +FL    V DP +RP+  ++ RHPF+
Sbjct:   62 PNVVRYLGCFT--DEAGA--LSLVVEYVNGWSLAEHVAQYGFF---------------------------PEPLVAEITRQLVDGLAYLHSRGVIHRDVKPANVLVTRSGVVKICDFGVSARGSVPGISGRTVCGTPHYIAPEVIEQRPYTESVDVWSLGCTVMELATGRRPW-HELTAMSAL----VALSKSRTPPLPPGLSPACRNFLGTCWVRDPARRPSAAQLRRHPFL 258          
BLAST of mRNA_S-dermatodea_contig10641.449.1 vs. uniprot
Match: A0A7S1G6G9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G6G9_9STRA)

HSP 1 Score: 101 bits (251), Expect = 8.220e-21
Identity = 65/167 (38.92%), Postives = 88/167 (52.69%), Query Frame = 1
Query:  562 ETWLARVCRDMLEALRYLHDRRCIHRDVKPANLLLGP-GGAKLADFGSTVSEDESSGHR--MHGTIRFMSPERLSARPYRPGSDLWAAGLTVASAALGENPIPHCSTEFEAVEHAEAAFDMVAAHP-----GASALSPALLDFLKNVLVADPEKRPTVEEMLRHPFV 1038
            E  +A VC  ML  L YLH    IHRDVK  N+LL P G AK+ADFG +   + +   R  + GT  +M+PE +    Y   +D+W+ G+T+   A GE P  H         H   A  ++   P      A+  SP + DF+K  L  DP  RPTV+E+L+HPFV
Sbjct:   97 EPEIADVCASMLLGLSYLHREHLIHRDVKAGNVLLSPEGNAKMADFGVSAQLNNTMSRRRTVIGTPFWMAPEVIQETSYDGKADVWSLGITIIEMAEGEPPNSHI--------HPMRAIFLIPTLPPPKLADAAKWSPHMQDFVKLCLQKDPADRPTVDELLKHPFV 255          
BLAST of mRNA_S-dermatodea_contig10641.449.1 vs. uniprot
Match: A0A7S2RLR2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLR2_9STRA)

HSP 1 Score: 103 bits (258), Expect = 9.830e-21
Identity = 76/235 (32.34%), Postives = 109/235 (46.38%), Query Frame = 1
Query:  337 GSPCPFMPSYFGSFVSQDELGRPRVSIVLEHIPGVDLACWIEETGSRRSGASGAGXXXXXXXXXDAKGLRWHHPPETWLARVCRDMLEALRYLHDRRCIHRDVKPANLLLGP-GGAKLADFGSTVSEDES--SGHRMHGTIRFMSPERLSARPYRPGSDLWAAGLTVASAALGENPIPHCSTEFEAVEHAEAAFDMVAAHPGASALSPALLDFLKNVLVADPEKRPTVEEMLRHP 1032
            G  CP + +++ +FV   E     VS+V+E++ G  L   ++                           R     ET L  +   +L+ L +LH+RR IHRD+KP NLL+   G  KL+DFG     D S        GT  +MSPERL+  PY    D+W  GLTV + ALG  P       +  ++  +      A+ P  + LSP + DFL+  L  DP  RP+  E+LR P
Sbjct:  409 GPSCPHIVAFYDAFVQPQE---GTVSMVVEYMDGGSLQDILD---------------------------RGRRADETVLVNIAFQVLKGLVFLHERRQIHRDLKPGNLLIDHLGRVKLSDFGIARELDASWNGAETFVGTFTYMSPERLAGEPYSCPCDIWGLGLTVLALALGRFPYSESIGYWGLLQEIKER----ASPPPPAHLSPEMRDFLEACLRKDPRHRPSAAELLRMP 609          
BLAST of mRNA_S-dermatodea_contig10641.449.1 vs. uniprot
Match: A0A7S2GCB3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GCB3_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.160e-20
Identity = 80/262 (30.53%), Postives = 123/262 (46.95%), Query Frame = 1
Query:  352 FMPSYFGSFVSQDELGRPRVSIVLEHIPGVDLACWIEETGSRRSGASGAGXXXXXXXXXDAKGLRWHHPPETWLARVCRDMLEALRYLHDRRCIHRDVKPANLLLGPGG-AKLADFG----------------------------STV-SEDESSGHRMH---GTIRFMSPERLSARPYRPGSDLWAAGLTVASAALGENPIPHCSTEFEAVEHAEAAFDMVAAHPGASALSPALLDFLKNVLVADPEKRPTVEEMLRHPFV 1038
            +M +Y G+FVS ++    + S+++E +   DL  W+E                       AK    H  PE +LA +   + +AL  L++++ +HRDVKP N+L+   G  KL+DFG                            ST+ S  E     +    GT R+MSPERL+A  Y   +D+WA GLT+A+  LGE P     + ++ ++++E     V        LS  L DF+   L  DP +RP  ++ML+HPFV
Sbjct:  449 YMVNYHGAFVSDED---NKASLMVEFMANGDLESWVE-----------------------AK----HELPEEFLAVIAYQVCKALASLNEKKRMHRDVKPGNVLISSTGQVKLSDFGMCADVKGATDTGCDMNIRPNAGVGFASGSTILSRQERHSETLKDFVGTYRYMSPERLTADEYSYSADVWALGLTLATCVLGECPFSKDCSFWQLLQNSELPETEVLKRQD---LSTDLRDFITTCLKKDPNERPEAKDMLQHPFV 677          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10641.449.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K7A9_9PHAE6.690e-11657.87Protein kinase domain-containing protein n=1 Tax=E... [more]
D7FS87_ECTSI1.980e-11554.88Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A835YL65_9STRA1.310e-2239.26Kinase-like domain-containing protein (Fragment) n... [more]
A0A0S4IQX7_BODSA1.330e-2238.15Protein kinase, putative n=1 Tax=Bodo saltans TaxI... [more]
A0A2P6V9N1_9CHLO4.440e-2230.21Mitogen-activated kinase kinase 3 n=1 Tax=Micracti... [more]
A0A2I0B120_9ASPA1.570e-2134.05Mitogen-activated protein kinase kinase kinase YOD... [more]
A0A1X6NJC2_PORUM4.880e-2132.62Protein kinase domain-containing protein (Fragment... [more]
A0A7S1G6G9_9STRA8.220e-2138.92Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S2RLR2_9STRA9.830e-2132.34Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2GCB3_9STRA1.160e-2030.53Hypothetical protein n=1 Tax=Florenciella parvula ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10641contigS-dermatodea_contig10641:3059..4342 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score355.5
Seed ortholog evalue2.8e-95
Seed eggNOG ortholog2880.D7FS87
EggNOG free text desc.MAP kinase kinase activity
EggNOG OGsKOG0581@1,KOG0581@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSerine/threonine/dual specificity protein kinase, catalytic domain
Ec32 orthologEc-05_004950.1
Exons3
Model size1038
Cds size1038
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10641.449.1prot_S-dermatodea_contig10641.449.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig10641 3059..4342 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924167.3911893-CDS-S-dermatodea_contig10641:3058..33981622924167.3911893-CDS-S-dermatodea_contig10641:3058..3398Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10641 3059..3398 +
1694079063.794106-CDS-S-dermatodea_contig10641:3058..33981694079063.794106-CDS-S-dermatodea_contig10641:3058..3398Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10641 3059..3398 +
1622924167.4012485-CDS-S-dermatodea_contig10641:3521..36761622924167.4012485-CDS-S-dermatodea_contig10641:3521..3676Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10641 3522..3676 +
1694079063.8039114-CDS-S-dermatodea_contig10641:3521..36761694079063.8039114-CDS-S-dermatodea_contig10641:3521..3676Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10641 3522..3676 +
1622924167.4099996-CDS-S-dermatodea_contig10641:3799..43421622924167.4099996-CDS-S-dermatodea_contig10641:3799..4342Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10641 3800..4342 +
1694079063.81314-CDS-S-dermatodea_contig10641:3799..43421694079063.81314-CDS-S-dermatodea_contig10641:3799..4342Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10641 3800..4342 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig10641.449.1

>prot_S-dermatodea_contig10641.449.1 ID=prot_S-dermatodea_contig10641.449.1|Name=mRNA_S-dermatodea_contig10641.449.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=346bp
FFLSGSTSTVLKVVDVDTLRVVAVKEMTVCDSKQTAVLRHELRVLHPQLQ
PLIPSKTARRGRRSRGPTPTPTPTKAAAPASRGSSADNTCGDGGVTGIAA
GAGAGGKGRRGGGSPCPFMPSYFGSFVSQDELGRPRVSIVLEHIPGVDLA
CWIEETGSRRSGASGAGAVAGAGAGADAKGLRWHHPPETWLARVCRDMLE
ALRYLHDRRCIHRDVKPANLLLGPGGAKLADFGSTVSEDESSGHRMHGTI
RFMSPERLSARPYRPGSDLWAAGLTVASAALGENPIPHCSTEFEAVEHAE
AAFDMVAAHPGASALSPALLDFLKNVLVADPEKRPTVEEMLRHPFV
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mRNA from alignment at S-dermatodea_contig10641:3059..4342+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig10641.449.1 ID=mRNA_S-dermatodea_contig10641.449.1|Name=mRNA_S-dermatodea_contig10641.449.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1284bp|location=Sequence derived from alignment at S-dermatodea_contig10641:3059..4342+ (Saccorhiza dermatodea SderLu1190fm monoicous)
TTTTTTCTTTCAGGCTCGACCAGCACGGTGCTAAAGGTGGTGGACGTGGA CACCCTCCGAGTGGTTGCGGTGAAAGAGATGACGGTGTGCGACTCCAAGC AAACGGCTGTCCTGCGACACGAGCTGCGAGTCCTCCACCCGCAGCTCCAG CCCCTCATACCCAGCAAGACCGCGCGACGTGGCCGAAGATCCAGGGGGCC CACTCCAACACCGACGCCCACGAAGGCAGCCGCGCCCGCCTCCCGTGGGA GCTCCGCCGACAATACTTGTGGCGACGGCGGCGTCACCGGCATCGCTGCT GGCGCTGGCGCGGGGGGGAAAGGGCGAAGAGGAGGGGGCAGTGGCGGGCG GATCGGGCGGGGGGCGGGGGGCTCGTGGGGTGGTGTTGGCAATAGCTGTA GTAGTAGTAGTCGCGGCGGTGACGATGGTGGCGCTGGTAGCGGTGACTCC CCGCCTCGACGAGGCCCGTGCCCCTTTATGCCGAGCTACTTCGGGTCTTT CGTTTCGCAGGATGAGTTGGGCCGGCCTCGCGTCAGCATCGTGCTGGAGC ACATCCCCGGGGTGGACCTTGCGTGTTGGATCGAGGAAACCGGGAGCCGC CGCAGTGGCGCCAGCGGGGTCGAGGCTAATAAGGCGGCGGGGGCAGCAGA AGAAAACATCGATGCGAACACGAACACGAACACGAACTCGAACGCGAACA CGGACGCTAACTCTAACGCGAGCGCGAGCGCAAACGTCGAGGCGGGGGCG GTCGCGGGAGCGGGGGCGGGAGCAGACGCGAAGGGCTTGCGGTGGCACCA CCCGCCAGAGACGTGGCTCGCGCGGGTCTGCCGCGACATGCTGGAGGCCC TTCGTTACCTGCACGACCGCCGCTGTATACACCGCGACGTGAAGCCGGCA AACCTGCTGCTGGGCCCCGGGGGCGCCAAGCTCGCCGACTTCGGGAGCAC GGTAAGCGAAGACGAATCTTCGGGTCATCGCATGCACGGGACGATCCGGT TTATGAGTCCCGAGCGGCTTTCCGCGCGGCCGTACCGCCCCGGATCGGAT CTGTGGGCGGCAGGGCTGACAGTGGCCTCCGCGGCGCTGGGGGAAAACCC GATACCGCACTGCTCGACGGAGTTCGAGGCGGTCGAGCACGCGGAGGCGG CGTTCGACATGGTCGCGGCACACCCCGGCGCATCCGCGCTCTCCCCGGCG CTGCTGGACTTCTTGAAGAACGTGCTGGTGGCGGATCCTGAGAAGCGCCC GACTGTGGAGGAAATGCTTCGACATCCGTTCGTG
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Coding sequence (CDS) from alignment at S-dermatodea_contig10641:3059..4342+

>mRNA_S-dermatodea_contig10641.449.1 ID=mRNA_S-dermatodea_contig10641.449.1|Name=mRNA_S-dermatodea_contig10641.449.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2076bp|location=Sequence derived from alignment at S-dermatodea_contig10641:3059..4342+ (Saccorhiza dermatodea SderLu1190fm monoicous)
TTTTTTCTTTCAGGCTCGACCAGCACGGTGCTAAAGGTGGTGGACGTGGA
CACCCTCCGAGTGGTTGCGGTGAAAGAGATGACGGTGTGCGACTCCAAGC
AAACGGCTGTCCTGCGACACGAGCTGCGAGTCCTCCACCCGCAGCTCCAG
CCCCTCATACCCAGCAAGACCGCGCGACGTGGCCGAAGATCCAGGGGGCC
CACTCCAACACCGACGCCCACGAAGGCAGCCGCGCCCGCCTCCCGTGGGA
GCTCCGCCGACAATACTTGTGGCGACGGCGGCGTCACCGGCATCGCTGCT
GGCGCTGGCGCGGGGGGGAAAGGGCGAAGAGGAGGGGGCATTTTTTCTTT
CAGGCTCGACCAGCACGGTGCTAAAGGTGGTGGACGTGGACACCCTCCGA
GTGGTTGCGGTGAAAGAGATGACGGTGTGCGACTCCAAGCAAACGGCTGT
CCTGCGACACGAGCTGCGAGTCCTCCACCCGCAGCTCCAGCCCCTCATAC
CCAGCAAGACCGCGCGACGTGGCCGAAGATCCAGGGGGCCCACTCCAACA
CCGACGCCCACGAAGGCAGCCGCGCCCGCCTCCCGTGGGAGCTCCGCCGA
CAATACTTGTGGCGACGGCGGCGTCACCGGCATCGCTGCTGGCGCTGGCG
CGGGGGGGAAAGGGCGAAGAGGAGGGGGCAGCCCGTGCCCCTTTATGCCG
AGCTACTTCGGGTCTTTCGTTTCGCAGGATGAGTTGGGCCGGCCTCGCGT
CAGCATCGTGCTGGAGCACATCCCCGGGGTGGACCTTGCGTGTTGGATCG
AGGAAACCGGGAGCCGCCGCAGTGGCGCCAGCGGGGCCCGTGCCCCTTTA
TGCCGAGCTACTTCGGGTCTTTCGTTTCGCAGGATGAGTTGGGCCGGCCT
CGCGTCAGCATCGTGCTGGAGCACATCCCCGGGGTGGACCTTGCGTGTTG
GATCGAGGAAACCGGGAGCCGCCGCAGTGGCGCCAGCGGGGCGGGGGCGG
TCGCGGGAGCGGGGGCGGGAGCAGACGCGAAGGGCTTGCGGTGGCACCAC
CCGCCAGAGACGTGGCTCGCGCGGGTCTGCCGCGACATGCTGGAGGCCCT
TCGTTACCTGCACGACCGCCGCTGTATACACCGCGACGTGAAGCCGGCAA
ACCTGCTGCTGGGCCCCGGGGGCGCCAAGCTCGCCGACTTCGGGAGCACG
GTAAGCGAAGACGAATCTTCGGGTCATCGCATGCACGGGACGATCCGGTT
TATGAGTCCCGAGCGGCTTTCCGCGCGGCCGTACCGCCCCGGATCGGATC
TGTGGGCGGCAGGGCTGACAGTGGCCTCCGCGGCGCTGGGGGAAAACCCG
ATACCGCACTGCTCGACGGAGTTCGAGGCGGTCGAGCACGCGGAGGCGGC
GTTCGACATGGTCGCGGCACACCCCGGCGCATCCGCGCTCTCCCCGGCGC
TGCTGGACTTCTTGAAGAACGTGCTGGTGGCGGATCCTGAGAAGCGCCCG
ACTGTGGAGGAAATGCTTCGACATCCGTTCGTGGCGGGGGCGGTCGCGGG
AGCGGGGGCGGGAGCAGACGCGAAGGGCTTGCGGTGGCACCACCCGCCAG
AGACGTGGCTCGCGCGGGTCTGCCGCGACATGCTGGAGGCCCTTCGTTAC
CTGCACGACCGCCGCTGTATACACCGCGACGTGAAGCCGGCAAACCTGCT
GCTGGGCCCCGGGGGCGCCAAGCTCGCCGACTTCGGGAGCACGGTAAGCG
AAGACGAATCTTCGGGTCATCGCATGCACGGGACGATCCGGTTTATGAGT
CCCGAGCGGCTTTCCGCGCGGCCGTACCGCCCCGGATCGGATCTGTGGGC
GGCAGGGCTGACAGTGGCCTCCGCGGCGCTGGGGGAAAACCCGATACCGC
ACTGCTCGACGGAGTTCGAGGCGGTCGAGCACGCGGAGGCGGCGTTCGAC
ATGGTCGCGGCACACCCCGGCGCATCCGCGCTCTCCCCGGCGCTGCTGGA
CTTCTTGAAGAACGTGCTGGTGGCGGATCCTGAGAAGCGCCCGACTGTGG
AGGAAATGCTTCGACATCCGTTCGTG
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