mRNA_S-dermatodea_contig1063.443.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig1063.443.1 vs. uniprot
Match: A0A6H5K4I9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4I9_9PHAE) HSP 1 Score: 118 bits (295), Expect = 5.450e-30 Identity = 59/79 (74.68%), Postives = 65/79 (82.28%), Query Frame = 1
Query: 1 KHLVRPSDALCEAAMLAEPNLSVRMSEVTAAVLRPLLKNLPERVVEYNRRYQLAVNAIEAEAAGLIDVPRQDTRVSTVG 237
KHLVRPSDALCEAA +EPNLSVRMSE TAAVLRPLLK+LP RV+EYNRRY + V +EAEA GLIDVP+Q V VG
Sbjct: 172 KHLVRPSDALCEAARFSEPNLSVRMSETTAAVLRPLLKSLPSRVLEYNRRYNIVVKTMEAEALGLIDVPKQHELVGAVG 250
BLAST of mRNA_S-dermatodea_contig1063.443.1 vs. uniprot
Match: D7FSI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSI1_ECTSI) HSP 1 Score: 114 bits (285), Expect = 1.060e-29 Identity = 58/79 (73.42%), Postives = 63/79 (79.75%), Query Frame = 1
Query: 1 KHLVRPSDALCEAAMLAEPNLSVRMSEVTAAVLRPLLKNLPERVVEYNRRYQLAVNAIEAEAAGLIDVPRQDTRVSTVG 237
KHLVRPSDALCEAA +EPNLSVRMSE TAAVLRPLLK+LP RV+EYNR Y + V +EAEA GLIDVP Q V VG
Sbjct: 40 KHLVRPSDALCEAARFSEPNLSVRMSETTAAVLRPLLKSLPSRVLEYNRIYNIVVKTMEAEAPGLIDVPEQHELVGAVG 118
BLAST of mRNA_S-dermatodea_contig1063.443.1 vs. uniprot
Match: A0A7S3ZU99_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZU99_9STRA) HSP 1 Score: 102 bits (253), Expect = 9.620e-24 Identity = 50/79 (63.29%), Postives = 58/79 (73.42%), Query Frame = 1
Query: 1 KHLVRPSDALCEAAMLAEPNLSVRMSEVTAAVLRPLLKNLPERVVEYNRRYQLAVNAIEAEAAGLIDVPRQDTRVSTVG 237
KH VRP+D LCE AM PNLS RM+EVTAAV+RPL+KNLP+RV +YNRRY V + EA +I VP QD RV TVG
Sbjct: 269 KHAVRPADELCEVAMAEMPNLSCRMNEVTAAVMRPLIKNLPQRVEDYNRRYDSVVKVLREEAGDIIVVPTQDERVGTVG 347
BLAST of mRNA_S-dermatodea_contig1063.443.1 vs. uniprot
Match: A0A7S4E6V5_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E6V5_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 6.550e-23 Identity = 50/79 (63.29%), Postives = 56/79 (70.89%), Query Frame = 1
Query: 1 KHLVRPSDALCEAAMLAEPNLSVRMSEVTAAVLRPLLKNLPERVVEYNRRYQLAVNAIEAEAAGLIDVPRQDTRVSTVG 237
KH VRP D LCE AM PNLS RM+EVTAAV+RPL+KNLP+RV YNRRY V + EA +I VP QD RV TVG
Sbjct: 266 KHAVRPPDDLCEVAMAEMPNLSCRMNEVTAAVMRPLIKNLPQRVEAYNRRYDAVVKVLREEAGDVIVVPTQDERVGTVG 344
BLAST of mRNA_S-dermatodea_contig1063.443.1 vs. uniprot
Match: A0A8J2WEJ6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WEJ6_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 1.100e-22 Identity = 50/79 (63.29%), Postives = 56/79 (70.89%), Query Frame = 1
Query: 1 KHLVRPSDALCEAAMLAEPNLSVRMSEVTAAVLRPLLKNLPERVVEYNRRYQLAVNAIEAEAAGLIDVPRQDTRVSTVG 237
KH VRP D LCE AM PNLS RM+EVTAAV+RPL+KNLP+RV YNRRY V + EA +I VP QD RV TVG
Sbjct: 202 KHAVRPPDDLCEVAMAEMPNLSCRMNEVTAAVMRPLIKNLPQRVEAYNRRYDAVVKVLREEAGDVIVVPTQDERVGTVG 280
BLAST of mRNA_S-dermatodea_contig1063.443.1 vs. uniprot
Match: D7FMY1_ECTSI (Aminotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMY1_ECTSI) HSP 1 Score: 88.6 bits (218), Expect = 7.500e-19 Identity = 46/79 (58.23%), Postives = 57/79 (72.15%), Query Frame = 1
Query: 1 KHLVRPSDALCEAAMLAEPNLSVRMSEVTAAVLRPLLKNLPERVVEYNRRYQLAVNAIEAEAAGLIDVPRQDTRVSTVG 237
KH VR SD L E AML+E NLSVRM+E+TAAV+RPLL NLPERV +++RRYQ V +E + LI+VP+ S VG
Sbjct: 268 KHSVRGSDELMEKAMLSERNLSVRMTEMTAAVIRPLLANLPERVAQFHRRYQEVVGILEEQVPDLIEVPKPLEHASVVG 346
BLAST of mRNA_S-dermatodea_contig1063.443.1 vs. uniprot
Match: A0A7S3NJM7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJM7_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 5.970e-17 Identity = 45/79 (56.96%), Postives = 51/79 (64.56%), Query Frame = 1
Query: 1 KHLVRPSDALCEAAMLAEPNLSVRMSEVTAAVLRPLLKNLPERVVEYNRRYQLAVNAIEAEAAGLIDVPRQDTRVSTVG 237
KHL RP D LCE AML PNLS RMSE+TAAV RPLL NLP RV+ YN RY L + A ++ VP D R + VG
Sbjct: 249 KHLTRPDDILCEEAMLKYPNLSCRMSELTAAVARPLLANLPSRVITYNARYDLICSI--ATKNNVLKVPGHDYRCAPVG 325
BLAST of mRNA_S-dermatodea_contig1063.443.1 vs. uniprot
Match: A0A7S3FD09_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3FD09_9VIRI) HSP 1 Score: 73.9 bits (180), Expect = 1.250e-13 Identity = 40/80 (50.00%), Postives = 51/80 (63.75%), Query Frame = 1
Query: 1 KHLVRPSDALCEAAMLAEPNLSVRMSEVTAAVLRPLLKNL-PERVVEYNRRYQLAVNAIEAEAAGLIDVPRQDTRVSTVG 237
KHLV+P + LCE ML +PNLS RM+EVTAA++RPL++NL ER YN RY + + A A I VP Q V +G
Sbjct: 275 KHLVQPPEYLCEQYMLTKPNLSCRMTEVTAAMMRPLIRNLYSERKPRYNARYAMLCKVMAAMAGEHIFVPEQHEHVGNMG 354
BLAST of mRNA_S-dermatodea_contig1063.443.1 vs. uniprot
Match: F0YLY5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLY5_AURAN) HSP 1 Score: 64.3 bits (155), Expect = 3.140e-10 Identity = 38/80 (47.50%), Postives = 48/80 (60.00%), Query Frame = 1
Query: 1 KHLVRPSDA-LCEAAMLAEPNLSVRMSEVTAAVLRPLLKNLPERVVEYNRRYQLAVNAIEAEAAGLIDVPRQDTRVSTVG 237
KH RP D L E AM P LS RMSE++AA LRP + +L +RVVE NRR+ L ++ A G + +P D R S VG
Sbjct: 263 KHGARPEDDDLLERAMATMPYLSTRMSELSAACLRPAVASLADRVVEANRRHALIARSLGDLAGGGVVLPESDPRASCVG 342
BLAST of mRNA_S-dermatodea_contig1063.443.1 vs. uniprot
Match: K8ECV9_9CHLO (Aminotransferase, DegT/DnrJ/EryC1/StrS family protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8ECV9_9CHLO) HSP 1 Score: 63.5 bits (153), Expect = 5.930e-10 Identity = 36/80 (45.00%), Postives = 45/80 (56.25%), Query Frame = 1
Query: 1 KHLVRPSDALCEAAMLAEPNLSVRMSEVTAAVLRPLLKNL-PERVVEYNRRYQLAVNAIEAEAAGLIDVPRQDTRVSTVG 237
KH P LCE ML PNLS RM+EVTAA++RPL+ NL ER+ Y R+ L + I+ A + VP V VG
Sbjct: 335 KHARMPPQELCEKYMLTMPNLSSRMNEVTAAMMRPLIANLYSERLPRYMERWLLITSVIDLMAGEYVSVPTSGPNVEDVG 414 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1063.443.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1063.443.1 >prot_S-dermatodea_contig1063.443.1 ID=prot_S-dermatodea_contig1063.443.1|Name=mRNA_S-dermatodea_contig1063.443.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=79bp KHLVRPSDALCEAAMLAEPNLSVRMSEVTAAVLRPLLKNLPERVVEYNRRback to top mRNA from alignment at S-dermatodea_contig1063:17597..18416- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig1063.443.1 ID=mRNA_S-dermatodea_contig1063.443.1|Name=mRNA_S-dermatodea_contig1063.443.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=820bp|location=Sequence derived from alignment at S-dermatodea_contig1063:17597..18416- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig1063:17597..18416- >mRNA_S-dermatodea_contig1063.443.1 ID=mRNA_S-dermatodea_contig1063.443.1|Name=mRNA_S-dermatodea_contig1063.443.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=474bp|location=Sequence derived from alignment at S-dermatodea_contig1063:17597..18416- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |