mRNA_S-dermatodea_contig10628.441.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10628.441.1 vs. uniprot
Match: D7FR84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR84_ECTSI) HSP 1 Score: 306 bits (783), Expect = 3.260e-97 Identity = 159/218 (72.94%), Postives = 173/218 (79.36%), Query Frame = 1
Query: 1 ILKGKALRSDTDTLEQAGIVV----------STAEGGESGGGGFEQPSRLLLVGSTSSEVAVVLSGREMVTVRNDLTGAVVPKGYKKMALNFPSGPPDHSPYRFQRIETLPGLPHEETARDILESLAADPGVRMVLEKHRWTVGALCELYPEGKVGVSAKCVMGLNQNHGAKILLRLRTDDLKGFRKILSIRKVLFHELAHNDISDHNDEFYMLMRQV 624
ILKGKALR + TLE AG++V + E E G F Q S+L+LVGS SEV VL ++ V VRNDL G V PKGYKK+ALN+P GP D SPYRF+RIETLPGLP EETAR ILESLAADPGVR VLEKHRWTVGALCELYPEGKVGVS KCV+GLNQNHG KI LRLRTDDL+GFRKILSIRKVLFHELAHNDISDH+D FYMLMRQV
Sbjct: 44 ILKGKALRDEAGTLEAAGVLVPSPAQTATTTTATERHEEKGDTFVQKSKLMLVGSKPSEVEEVLREQDRVRVRNDLNGQVTPKGYKKVALNYPPGPSDLSPYRFERIETLPGLPEEETARKILESLAADPGVRAVLEKHRWTVGALCELYPEGKVGVSDKCVLGLNQNHGMKIFLRLRTDDLRGFRKILSIRKVLFHELAHNDISDHDDNFYMLMRQV 261
BLAST of mRNA_S-dermatodea_contig10628.441.1 vs. uniprot
Match: A0A7S3XML3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XML3_HETAK) HSP 1 Score: 180 bits (456), Expect = 7.410e-55 Identity = 85/119 (71.43%), Postives = 97/119 (81.51%), Query Frame = 1
Query: 268 SPYRFQRIETLPGLPHEETARDILESLAADPGVRMVLEKHRWTVGALCELYPEGKVGVSAKCVMGLNQNHGAKILLRLRTDDLKGFRKILSIRKVLFHELAHNDISDHNDEFYMLMRQV 624
SPYRF RIETLPGLP ++ AR ILE LA D G+ V+EKHRW VGALCELYPEG+VGVS CV+GLNQN G KILLRLRTDDL+GFRK L +KVL+HELAH DH+D+FY LMRQ+
Sbjct: 2 SPYRFGRIETLPGLPGQDEARSILEQLANDRGILKVMEKHRWQVGALCELYPEGRVGVSEVCVLGLNQNRGQKILLRLRTDDLRGFRKYLGTKKVLYHELAHMVHDDHDDDFYQLMRQI 120
BLAST of mRNA_S-dermatodea_contig10628.441.1 vs. uniprot
Match: A0A7R9WVU5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WVU5_9STRA) HSP 1 Score: 178 bits (451), Expect = 1.080e-50 Identity = 107/218 (49.08%), Postives = 139/218 (63.76%), Query Frame = 1
Query: 1 ILKGKALRSDTDTLEQAGIVVSTAEGGESGGGGFEQPSRLLLVGSTSSEVAVVLSGREMV-----TVRNDLTGAVVPKGYKKM-----ALNFPSGPPDHSPYRFQRIETLPGLPHEETARDILESLAADPGVRMVLEKHRWTVGALCELYPEGKVGVSAKCVMGLNQNHGAKILLRLRTDDLKGFRKILSIRKVLFHELAHNDISDHNDEFYMLMRQV 624
+LKGK L + D L + ++ AE ++ ++ LL +TSS L + V TVR+DLT A K +++ AL + P SPY F I+ LP LPH++TAR IL LA DPGV + +H+W VG+L ELYP+GKVG SA CVMGLN+N G +ILLRLRTDDLKGFRK+LSIRKVLFHELAHN S+H+ +F+ LMRQ+
Sbjct: 56 VLKGKVLSNANDRLRE---LICAAECSQAP----KKRKYTLLATATSSSTKQRLQQQMEVASKSRTVRDDLTTAGQAKEHRRKMQGRRALRNTARTPS-SPYGFGSIDVLPNLPHQDTARGILTQLANDPGVLACMAQHKWKVGSLAELYPDGKVGQSAVCVMGLNKNQGQQILLRLRTDDLKGFRKMLSIRKVLFHELAHNVHSEHDSKFFQLMRQI 265
BLAST of mRNA_S-dermatodea_contig10628.441.1 vs. uniprot
Match: A0A836CEA9_9STRA (WLM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEA9_9STRA) HSP 1 Score: 183 bits (465), Expect = 1.550e-50 Identity = 111/253 (43.87%), Postives = 144/253 (56.92%), Query Frame = 1
Query: 1 ILKGKALRSDTDTLEQAGIVVSTAEGGESGGGGFEQPSRLLLVGSTSSEVAVVLSGREMVTVRNDLTGA-VVPKGYKKMALNFP-SGPPDHSPYRFQRIETLPGLPHEETARDILESLAADPG---------------------------VRMVLEKHRWTVGALCELYPEG----------------KVGVSAKCVMGLNQNHGAKILLRLRTDDLKGFRKILSIRKVLFHELAHNDISDHNDEFYMLMRQV 624
+ KGK L+ D+LE+ G++V ++L+L+GST+++V V V VR+DLTG VVPKGY K+ L + P D SPY F+R++ L GLP + A+ ILE LAAD G VR V+ KH+WTVG L ELYPEG KVGVS C+MGLN+N G I LR+RTDDL+GFRK LS+ KVL+HELAHN DH+++FYMLMRQ+
Sbjct: 56 VWKGKTLKEPYDSLEETGVLVPGR-------------AKLMLIGSTAADVVAVSQPAPHVRVRDDLTGEEVVPKGYVKVPLGVGGTDPRDRSPYVFERVQALRGLPRQAEAQAILEELAADRGTCYNAXXXXXXXXXXXXXXXXXXXXXXVRAVMAKHKWTVGLLTELYPEGXXXXXXXXXXXXXXXXKVGVSETCLMGLNENRGQTIRLRVRTDDLQGFRKPLSMLKVLYHELAHNVYGDHDNDFYMLMRQI 295
BLAST of mRNA_S-dermatodea_contig10628.441.1 vs. uniprot
Match: W4FVA6_9STRA (WLM domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FVA6_9STRA) HSP 1 Score: 173 bits (439), Expect = 1.670e-49 Identity = 79/117 (67.52%), Postives = 99/117 (84.62%), Query Frame = 1
Query: 274 YRFQRIETLPGLPHEETARDILESLAADPGVRMVLEKHRWTVGALCELYPEGKVGVSAKCVMGLNQNHGAKILLRLRTDDLKGFRKILSIRKVLFHELAHNDISDHNDEFYMLMRQV 624
Y+F+ IETLPGLP+E TAR+IL SLA+DPG+ VL H+W VGAL E+YP+GKVGV CV+GLN+N G +I LRLRTDDL GFRK L+I++VLFHEL+HN++SDHN++FY LMRQV
Sbjct: 122 YKFRDIETLPGLPNEPTARNILVSLASDPGILAVLAHHKWQVGALVEMYPDGKVGVDPVCVLGLNENKGQRIRLRLRTDDLLGFRKFLTIKQVLFHELSHNEVSDHNNDFYQLMRQV 238
BLAST of mRNA_S-dermatodea_contig10628.441.1 vs. uniprot
Match: A0A024T9X3_9STRA (WLM domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T9X3_9STRA) HSP 1 Score: 173 bits (439), Expect = 3.370e-49 Identity = 79/117 (67.52%), Postives = 97/117 (82.91%), Query Frame = 1
Query: 274 YRFQRIETLPGLPHEETARDILESLAADPGVRMVLEKHRWTVGALCELYPEGKVGVSAKCVMGLNQNHGAKILLRLRTDDLKGFRKILSIRKVLFHELAHNDISDHNDEFYMLMRQV 624
Y+F IETLP +P+E TAR+ILESLA DPG+ VL +H+W VGAL E++P+GKVGV CV+GLN+N G +I LRLRTDDL GFRK L+I++VLFHEL+HND+SDHN EFY LMRQV
Sbjct: 122 YKFHAIETLPNMPNEATARNILESLATDPGILAVLAQHKWHVGALVEMFPDGKVGVDPVCVLGLNENKGQRIRLRLRTDDLLGFRKFLTIKQVLFHELSHNDVSDHNPEFYQLMRQV 238
BLAST of mRNA_S-dermatodea_contig10628.441.1 vs. uniprot
Match: T0R844_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R844_SAPDV) HSP 1 Score: 174 bits (441), Expect = 1.200e-48 Identity = 80/117 (68.38%), Postives = 96/117 (82.05%), Query Frame = 1
Query: 274 YRFQRIETLPGLPHEETARDILESLAADPGVRMVLEKHRWTVGALCELYPEGKVGVSAKCVMGLNQNHGAKILLRLRTDDLKGFRKILSIRKVLFHELAHNDISDHNDEFYMLMRQV 624
YRF I+TLPGLP E AR IL SLA D G+ V+ KH+WTVGAL E++P+GKVGV CV+GLN+N G +ILLRLRTDDL+GFRK L+I+KVL+HEL HND+SDHN+EFY LMRQV
Sbjct: 117 YRFHEIQTLPGLPDEAKARAILTSLAQDKGILHVMAKHKWTVGALAEMFPDGKVGVDPVCVLGLNENKGQRILLRLRTDDLQGFRKYLTIKKVLYHELTHNDVSDHNNEFYQLMRQV 233
BLAST of mRNA_S-dermatodea_contig10628.441.1 vs. uniprot
Match: W4FXC0_9STRA (WLM domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FXC0_9STRA) HSP 1 Score: 173 bits (439), Expect = 1.410e-48 Identity = 79/117 (67.52%), Postives = 99/117 (84.62%), Query Frame = 1
Query: 274 YRFQRIETLPGLPHEETARDILESLAADPGVRMVLEKHRWTVGALCELYPEGKVGVSAKCVMGLNQNHGAKILLRLRTDDLKGFRKILSIRKVLFHELAHNDISDHNDEFYMLMRQV 624
Y+F+ IETLPGLP+E TAR+IL SLA+DPG+ VL H+W VGAL E+YP+GKVGV CV+GLN+N G +I LRLRTDDL GFRK L+I++VLFHEL+HN++SDHN++FY LMRQV
Sbjct: 122 YKFRDIETLPGLPNEPTARNILVSLASDPGILAVLAHHKWQVGALVEMYPDGKVGVDPVCVLGLNENKGQRIRLRLRTDDLLGFRKFLTIKQVLFHELSHNEVSDHNNDFYQLMRQV 238
BLAST of mRNA_S-dermatodea_contig10628.441.1 vs. uniprot
Match: A0A7S3LEW3_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LEW3_9STRA) HSP 1 Score: 171 bits (433), Expect = 1.800e-48 Identity = 82/125 (65.60%), Postives = 97/125 (77.60%), Query Frame = 1
Query: 250 SGPPDHSPYRFQRIETLPGLPHEETARDILESLAADPGVRMVLEKHRWTVGALCELYPEGKVGVSAKCVMGLNQNHGAKILLRLRTDDLKGFRKILSIRKVLFHELAHNDISDHNDEFYMLMRQV 624
+G + Y F IETLP LPH E A+ ILE+LA DPG++ + KH W VGAL ELYPEGKVG S CVMGLNQN G +ILLR+RTDDL+GFRK+LSIRKVLFHELAHN S+HN +F+ LMRQ+
Sbjct: 149 AGSSGYGDYGFGTIETLPNLPHREKAQRILETLANDPGIQACMAKHNWKVGALAELYPEGKVGESEVCVMGLNQNKGMRILLRVRTDDLRGFRKMLSIRKVLFHELAHNVHSEHNGKFFQLMRQI 273
BLAST of mRNA_S-dermatodea_contig10628.441.1 vs. uniprot
Match: A0A024T9T7_9STRA (WLM domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T9T7_9STRA) HSP 1 Score: 173 bits (439), Expect = 3.380e-48 Identity = 79/117 (67.52%), Postives = 97/117 (82.91%), Query Frame = 1
Query: 274 YRFQRIETLPGLPHEETARDILESLAADPGVRMVLEKHRWTVGALCELYPEGKVGVSAKCVMGLNQNHGAKILLRLRTDDLKGFRKILSIRKVLFHELAHNDISDHNDEFYMLMRQV 624
Y+F IETLP +P+E TAR+ILESLA DPG+ VL +H+W VGAL E++P+GKVGV CV+GLN+N G +I LRLRTDDL GFRK L+I++VLFHEL+HND+SDHN EFY LMRQV
Sbjct: 122 YKFHAIETLPNMPNEATARNILESLATDPGILAVLAQHKWHVGALVEMFPDGKVGVDPVCVLGLNENKGQRIRLRLRTDDLLGFRKFLTIKQVLFHELSHNDVSDHNPEFYQLMRQV 238 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10628.441.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10628.441.1 >prot_S-dermatodea_contig10628.441.1 ID=prot_S-dermatodea_contig10628.441.1|Name=mRNA_S-dermatodea_contig10628.441.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=210bp ILKGKALRSDTDTLEQAGIVVSTAEGGESGGGGFEQPSRLLLVGSTSSEVback to top mRNA from alignment at S-dermatodea_contig10628:2797..7656- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10628.441.1 ID=mRNA_S-dermatodea_contig10628.441.1|Name=mRNA_S-dermatodea_contig10628.441.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4860bp|location=Sequence derived from alignment at S-dermatodea_contig10628:2797..7656- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10628:2797..7656- >mRNA_S-dermatodea_contig10628.441.1 ID=mRNA_S-dermatodea_contig10628.441.1|Name=mRNA_S-dermatodea_contig10628.441.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1260bp|location=Sequence derived from alignment at S-dermatodea_contig10628:2797..7656- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |