mRNA_S-dermatodea_contig10626.439.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10626.439.1 vs. uniprot
Match: D7FU23_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU23_ECTSI) HSP 1 Score: 257 bits (656), Expect = 3.960e-81 Identity = 119/169 (70.41%), Postives = 142/169 (84.02%), Query Frame = 1
Query: 1 VDESKNPSTSFVLSNSVYTYPDVYVCLYNFYGCDDMELEADCVASMGATEGGETSATFNPDMDDELQLPTSSFLTDERGYCVAFNVSDIPVTDEERDAEDYVLLNMYWYPGGSANSSTTCIEEDGDWESHSESVFVFLRDSATGILSAGIQVAYSCRTTSSSSHVFTYM 507
V +SKNPSTSFVLSN+VY YPD YVCLYNF+GCDDM LE C +S+ TEGG ++A FNP D E ++ T+++LTDERG+CV+F S + + D ERD EDY+LLNMYWYPGG+AN+STTCI E+G+WESHSESVF+FLRDS TGILSAGIQVAYSC T+ SSSHVFTYM
Sbjct: 38 VKKSKNPSTSFVLSNNVYRYPDTYVCLYNFFGCDDMALEEFCASSVFDTEGGSSTAVFNPGGDLEQEIATTAYLTDERGWCVSFETSAVDIVDGERDPEDYILLNMYWYPGGTANASTTCISEEGEWESHSESVFMFLRDSDTGILSAGIQVAYSCMTSESSSHVFTYM 206
BLAST of mRNA_S-dermatodea_contig10626.439.1 vs. uniprot
Match: D8LMD2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMD2_ECTSI) HSP 1 Score: 162 bits (411), Expect = 1.370e-45 Identity = 87/171 (50.88%), Postives = 110/171 (64.33%), Query Frame = 1
Query: 16 NPSTSFVLSNSVYTYPDVYVCLYNFYGCDDMELEADCVASMGATEGGETSATFNPDMDDELQLPTSSFLTDERGYCVAFNVSDIP-VTDEERDAE---DYVLLNMYWYPGGSANSSTTCIEEDGDWESHSESVFVFLRDSA---TGILSAGIQVAYSCRTTSSSSHVFTYM 507
NPS SF +SN+VY YPD++VCLY YGCD ELE +C+ S T G TSA F P + E +P LT E G+CV F S I +ER+A DY+LL+MYWYPGG+ + S TC+ E WE HSE ++V L+DS +G++S GIQV YSC T SSSH FTY+
Sbjct: 43 NPSVSFEVSNTVYEYPDIWVCLYGEYGCDSWELEEECMESAQLTGWGNTSAVFYPGGEYEQTIPGVGMLTPEDGWCVEFETSTISQFLGQERNASYYLDYLLLDMYWYPGGTESDSNTCVVEG--WEPHSEWMYVKLKDSGYPESGLVSTGIQVPYSCITNVSSSHSFTYV 211
BLAST of mRNA_S-dermatodea_contig10626.439.1 vs. uniprot
Match: A0A6H5K474_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K474_9PHAE) HSP 1 Score: 147 bits (370), Expect = 3.410e-39 Identity = 82/175 (46.86%), Postives = 105/175 (60.00%), Query Frame = 1
Query: 1 VDESKNPSTSFVLSNSVYTYPDVYVCLYNFYGCDDMELEADCVASMGA--TEGGETSATFNPDMDDELQLPTSSFLTDERGYCVAFNVSDIP-VTDEERDAE---DYVLLNMYWYPGGSANSSTTCIEEDGDWESHSESVFVFLRDSATGILSAGIQVAYSCRTTSSSSHVFTYM 507
V + NP S LSN+V+ YPDV+VCLY YGCD+ ELE +C+ S A T G +SA + P E ++ LT G+CV F S I ERDA+ DY+LL+MYWYPGG STTC+ E W++H + ++VFL D G +S GIQV YSC T SSSH TY+
Sbjct: 78 VRKRNNPDASIELSNTVFEYPDVWVCLYVDYGCDEWELEEECMTSATANRTGWGHSSAVYYPGGVYEQEIHVEEKLTPNNGWCVEFQTSKITRFLGRERDAKYYLDYLLLDMYWYPGGLEVDSTTCVVEG--WKTHKQWMYVFLNDPVLGQVSTGIQVPYSCITNVSSSHSHTYV 250
BLAST of mRNA_S-dermatodea_contig10626.439.1 vs. uniprot
Match: D8LMD1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMD1_ECTSI) HSP 1 Score: 147 bits (371), Expect = 4.270e-39 Identity = 80/175 (45.71%), Postives = 107/175 (61.14%), Query Frame = 1
Query: 1 VDESKNPSTSFVLSNSVYTYPDVYVCLYNFYGCDDMELEADCVASM--GATEGGETSATFNPDMDDELQLPTSSFLTDERGYCVAFNVSDIP-VTDEERDAE---DYVLLNMYWYPGGSANSSTTCIEEDGDWESHSESVFVFLRDSATGILSAGIQVAYSCRTTSSSSHVFTYM 507
V + +NP S LSN+V+ YPD++VCLY YGCD+ ELE +C+ S T G +SA + P E ++ LT G+CV F S I D ERDA+ DY+LL+MYWYPGG S TC+ E W++H++ ++VFL D + +S GIQV YSC T SSSH FTY+
Sbjct: 110 VRKRENPDASIELSNTVFEYPDIWVCLYVAYGCDEWELENECMTSATGNRTGWGNSSAVYYPGGVYEQEIHVEGKLTPNNGWCVEFQTSKITRFLDRERDAKYYLDYLLLDMYWYPGGLEADSNTCVVEG--WKTHNQWMYVFLNDPESERVSTGIQVPYSCITNVSSSHSFTYV 282
BLAST of mRNA_S-dermatodea_contig10626.439.1 vs. uniprot
Match: A0A6H5JN97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN97_9PHAE) HSP 1 Score: 144 bits (364), Expect = 1.210e-38 Identity = 77/169 (45.56%), Postives = 106/169 (62.72%), Query Frame = 1
Query: 19 PSTSFVLSNSVYTYPDVYVCLYNFYGCDDMELEADCVASMGA--TEGGETSATFNPDMDDELQLPTSSFLTDERGYCVAFNVSDIP-VTDEERDAE---DYVLLNMYWYPGGSANSSTTCIEEDGDWESHSESVFVFLRDSATGILSAGIQVAYSCRTTSSSSHVFTYM 507
P +S LSN+V+ YPD++VCLY YGCD++ELE +C+ S A T G +SA + P + E ++ T + G+CV F S I EERDA D++LL+MYWYPGG STTC+ E W++H++ ++VFL D A G +S + V YSC T SSSH FTY+
Sbjct: 44 PESSIELSNTVFEYPDIWVCLYADYGCDELELEEECMTSATANMTGWGNSSAVYYPGGEYEQEIHVEGRETPDHGWCVEFQTSKITRFLGEERDASRFLDHLLLDMYWYPGGLETDSTTCVIEG--WKTHNQWMYVFLNDPALGQVSTRVPVPYSCITNVSSSHSFTYV 210
BLAST of mRNA_S-dermatodea_contig10626.439.1 vs. uniprot
Match: D8LT44_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT44_ECTSI) HSP 1 Score: 142 bits (357), Expect = 1.940e-38 Identity = 73/170 (42.94%), Postives = 108/170 (63.53%), Query Frame = 1
Query: 13 KNPSTSFVLSNSVYTYPDVYVCLYNFYGCDDMELEADCVASMGATEGGETSATFNPDMDDELQLPTSSFLTDERGY-CVAFNVSDIPV----TDEERDAEDYVLLNMYWYPGGSANSSTTCIEEDGDWESHSESVFVFLRDSATGILSAGIQVAYSCRTTSSSSHVFTYM 507
++P T+F LSN++Y YPD++VCLY YGCD+MEL+ +CV S ATEGGET A F P + E +P L+ ++G+ CV + S I E + D++LL+M WYPGG N S TC+ E W +H+E +++ +D+ TG LS+ I + Y+C T S+S FT++
Sbjct: 42 EDPGTTFKLSNNIYQYPDLWVCLYVNYGCDEMELQEECVNSSNATEGGETLAVFYPGGEYEQVIPGEQILSKDKGFFCVEYETSTITTFLGQEPETGEYLDHILLDMSWYPGGY-NDSKTCLAEG--WGTHNEWIYITFKDAGTGSLSSEIPLPYTCITNGSTSREFTHV 208
BLAST of mRNA_S-dermatodea_contig10626.439.1 vs. uniprot
Match: D8LNQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ3_ECTSI) HSP 1 Score: 139 bits (351), Expect = 2.030e-36 Identity = 80/191 (41.88%), Postives = 108/191 (56.54%), Query Frame = 1
Query: 4 DESKNPSTSFVLSNSVYTYPDVYVCLYNFYGCDDMELEADCVASMGATEGGETSATFNP--DMDDELQLPTS-----------------SFLTDERGYCVAFNVSDIPVTD---EERDAE---DYVLLNMYWYPGGSANSSTTCIEEDGDWESHSESVFVFLRDSATGI-LSAGIQVAYSCRTTSSSSHVF 498
+++K P TSFVL+N VY YPD+++C Y YGCD ELE +CV S TEGGE A F P +D Q+ T +F+ D RG+CV F S TD +ERD+ DY+ L+MYWYPGG +STTC+ E +W H E V+ FL D +S G ++YSC T +S++H+F
Sbjct: 52 EKAKAPDTSFVLTNVVYKYPDLWICPYVNYGCDAWELEEECVDSAWMTEGGEPDAVFYPREKLDQLHQVTTEERKIAAIPDLTNFDSEGNFVEDGRGHCVIFETS--AATDFVGQERDSHEYLDYIHLDMYWYPGGKFGNSTTCVAEGVEWADHREWVYGFLSDPEDSTAISTGFPLSYSCITNTSNTHIF 240
BLAST of mRNA_S-dermatodea_contig10626.439.1 vs. uniprot
Match: A0A6H5L518_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L518_9PHAE) HSP 1 Score: 140 bits (352), Expect = 2.230e-36 Identity = 76/192 (39.58%), Postives = 107/192 (55.73%), Query Frame = 1
Query: 4 DESKNPSTSFVLSNSVYTYPDVYVCLYNFYGCDDMELEADCVASMGATEGGETSATFNP--DMDDELQLPTSSF-----------------LTDERGYCVAFNVSDIPV-TDEERDAE---DYVLLNMYWYPGGSANSSTTCIEEDGDWESHSESVFVFLRD-SATGILSAGIQVAYSCRTTSSSSHVFTYM 507
+++K P TSF+L+N VY +PD+++CLY YGCD++ELE CV S TEGG +A F P +D E ++ T L D RG CV F S +ERD DY+LL+MYW PGG++ STTC+ + +W H E V+ FL D +S G+ ++YSC T +S++H F M
Sbjct: 75 EKAKAPDTSFLLTNEVYKFPDLWICLYVNYGCDELELEEKCVNSAWTTEGGVPNAVFYPRVQLDQEQEITTEQLQIEAIPENTDVDSEGNSLEDGRGKCVIFRTSAATAFVGQERDPHEFLDYILLDMYWNPGGTSGKSTTCVPDGVEWTDHREWVYGFLSDPDDPSAISTGVHLSYSCITNTSNTHTFNTM 266
BLAST of mRNA_S-dermatodea_contig10626.439.1 vs. uniprot
Match: D7FXH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXH8_ECTSI) HSP 1 Score: 139 bits (350), Expect = 2.520e-36 Identity = 80/185 (43.24%), Postives = 112/185 (60.54%), Query Frame = 1
Query: 1 VDESKNPSTSFVLSNSVYTYPDVYVCLYNFYGCDDMELEADCVASMGATEGGETSATF------NPDMDDELQLP-----TSSF--LTDERGYCVAFNVSDIPV-TDEERDAE---DYVLLNMYWYPGGSANS-STTCIEEDGDWESHSESVFVFLRDSA-TGILSAGIQVAYSCRTTSSSSHVF 498
V+ +K+P+TS LSN VYTYPD++VC YN YGCDD+ LE CV S TE G +A F + + D L++ TS+ + RG CV F S +ERD + DY+LL+MYWYP G+ + STTC+E+ +WE H E V+ FL D ++S +Q++YSC T++S+SHVF
Sbjct: 38 VERTKSPNTSVELSNVVYTYPDLWVCPYNQYGCDDITLELGCVESSWETEAGPPNAIFYNSEGTDQNATDPLEIEATWVDTSAIEGIVKGRGLCVEFKTSAATAFVGQERDPDEYLDYILLDMYWYPSGNETTDSTTCVEDGEEWEPHREWVYAFLTDPEDVTMVSTAVQLSYSCITSASTSHVF 222
BLAST of mRNA_S-dermatodea_contig10626.439.1 vs. uniprot
Match: D7FXH7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXH7_ECTSI) HSP 1 Score: 131 bits (329), Expect = 2.150e-35 Identity = 73/170 (42.94%), Postives = 101/170 (59.41%), Query Frame = 1
Query: 43 NSVYTYPDVYVCLYNFYGCDDMELEADCVASMGATEGGETSATFNPD------MDDELQLPTSSFLT--DERGYCVAFNVSDIPV-TDEERDAE---DYVLLNMYWYPGGSANS-STTCIEEDGDWESHSESVFVFLRD-SATGILSAGIQVAYSCRTTSSSSHVFTYMV 510
N+VY YPD++VC YN YGCDD LE CV S TEGG A F P D+LQ+ ++ T + RG CV F S +ER+ + DY+ L+MYWYP G+ + STTC+E+ +WE H E V+ FL D ++S +Q++Y+C T++S+SHVF MV
Sbjct: 17 NTVYKYPDLWVCPYNQYGCDDTSLELGCVNSAWETEGGVPEAIFYPSDGTDQVATDQLQIEANAIDTGTEGRGLCVEFKTSAATAFVGQERNPDEYLDYISLDMYWYPSGNETTESTTCVEDGEEWEPHREWVYAFLTDPDDASMVSTAVQLSYTCITSTSNSHVFNSMV 186 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10626.439.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10626.439.1 >prot_S-dermatodea_contig10626.439.1 ID=prot_S-dermatodea_contig10626.439.1|Name=mRNA_S-dermatodea_contig10626.439.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=177bp VDESKNPSTSFVLSNSVYTYPDVYVCLYNFYGCDDMELEADCVASMGATEback to top mRNA from alignment at S-dermatodea_contig10626:6030..7691+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10626.439.1 ID=mRNA_S-dermatodea_contig10626.439.1|Name=mRNA_S-dermatodea_contig10626.439.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1662bp|location=Sequence derived from alignment at S-dermatodea_contig10626:6030..7691+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10626:6030..7691+ >mRNA_S-dermatodea_contig10626.439.1 ID=mRNA_S-dermatodea_contig10626.439.1|Name=mRNA_S-dermatodea_contig10626.439.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1062bp|location=Sequence derived from alignment at S-dermatodea_contig10626:6030..7691+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |