mRNA_S-dermatodea_contig10625.438.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10625.438.1 vs. uniprot
Match: D8LDN6_ECTSI (ULP_PROTEASE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDN6_ECTSI) HSP 1 Score: 206 bits (525), Expect = 2.490e-59 Identity = 96/125 (76.80%), Postives = 105/125 (84.00%), Query Frame = 1
Query: 1 AYGKVQHWTRNVDLFSKKFVFVPVVENMHWSLACLTNLHKLKAGKTKYDFGVDEEAPCMLFLDSLDMHHASRIYDYLRRYLQEKWRESGRKKLEFNTSSFPLVRPRVPTQINGCDCGVYVLRYAK 375
AY KVQHWTRNVDLF KKFV VPVVE+MHWSLACL NL KL+ K D+ DE PCMLFLDSLDMH+ASRIYDYLRRYLQ KW+E+GR ++ F+ FPLVRPRVPTQINGCDCGVYVLRYAK
Sbjct: 423 AYSKVQHWTRNVDLFKKKFVLVPVVEDMHWSLACLCNLDKLEVDKEAADYQSDEAQPCMLFLDSLDMHYASRIYDYLRRYLQAKWKETGRGEMLFDQDVFPLVRPRVPTQINGCDCGVYVLRYAK 547
BLAST of mRNA_S-dermatodea_contig10625.438.1 vs. uniprot
Match: A0A6H5KTD8_9PHAE (ULP_PROTEASE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD8_9PHAE) HSP 1 Score: 203 bits (516), Expect = 4.090e-58 Identity = 94/125 (75.20%), Postives = 105/125 (84.00%), Query Frame = 1
Query: 1 AYGKVQHWTRNVDLFSKKFVFVPVVENMHWSLACLTNLHKLKAGKTKYDFGVDEEAPCMLFLDSLDMHHASRIYDYLRRYLQEKWRESGRKKLEFNTSSFPLVRPRVPTQINGCDCGVYVLRYAK 375
AY KVQHWTR+VDLF KKFV VPVVE++HWSLACL NL KL+ K D+ DE PCMLFLDSLDMH+ASRIYDYLRRYLQ KW+E+GR ++ F+ FPLVRPRVPTQINGCDCGVYVLRYAK
Sbjct: 725 AYSKVQHWTRSVDLFKKKFVLVPVVEDLHWSLACLCNLDKLEVDKEAADYQSDEAQPCMLFLDSLDMHYASRIYDYLRRYLQAKWKETGRGEMLFDQHVFPLVRPRVPTQINGCDCGVYVLRYAK 849
BLAST of mRNA_S-dermatodea_contig10625.438.1 vs. uniprot
Match: A0A7S3ZZX5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZX5_9STRA) HSP 1 Score: 102 bits (253), Expect = 2.400e-23 Identity = 55/150 (36.67%), Postives = 82/150 (54.67%), Query Frame = 1
Query: 1 AYGKVQHWTRNVDLFSKKFVFVPVVENMHWSLACLTNLHKLKAG-----KTKYDFGVDEEA---------PCMLFLDSLDMHHASRIYDYLRRYLQEKWRESGRKKLEFNT-----------SSFPLVRPRVPTQINGCDCGVYVLRYAK 375
A+ +V+ WTR VD+F+KKF+ VPVVE++HWSLA + + +L + + D G E+ PC++ +DSL MH A +I +LR +L+ +WR+ + F + L P+VP Q N CDCGVY LRY +
Sbjct: 130 AHARVERWTRGVDVFAKKFLLVPVVEDLHWSLAIVCHPGELAKRAVARERRELDVGATEDEXXXXDCPARPCVIHMDSLRMHSAKKIEKWLRCFLEMEWRKRHSDEEPFTLRERTARAGGPPADLLLAMPKVPQQTNSCDCGVYTLRYGQ 279
BLAST of mRNA_S-dermatodea_contig10625.438.1 vs. uniprot
Match: K0RDN9_THAOC (ULP_PROTEASE domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RDN9_THAOC) HSP 1 Score: 103 bits (257), Expect = 3.200e-23 Identity = 57/133 (42.86%), Postives = 79/133 (59.40%), Query Frame = 1
Query: 13 VQHWTRNVDLFSKKFVFVPVVENMHWSLACLTNLHKLKAGKTKYDFGVDEEA--PCMLFLDSLDMHHASRIYDYLRRYLQEKWRESGRKKLE-----------FNTSSFPLVRPRVPTQINGCDCGVYVLRYA 372
V WT N D+F KKFVFVP+ +++HWSL + N ++ + YD V E PC+LFLDSL MH+ ++I L ++L +W+ +KK E F +S L+ P+VP Q NGCDCGV+V RYA
Sbjct: 786 VASWTANKDIFKKKFVFVPINKDLHWSLCVIVNPGEIAS---VYDEDVSSECEHPCLLFLDSLKMHNKNQIRKTLLKWLNAEWK--AKKKGEEDDSGILPHDPFQNNSMNLIVPKVPYQENGCDCGVFVCRYA 913
BLAST of mRNA_S-dermatodea_contig10625.438.1 vs. uniprot
Match: A0A7S4A0P2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A0P2_9STRA) HSP 1 Score: 102 bits (253), Expect = 3.490e-23 Identity = 55/150 (36.67%), Postives = 82/150 (54.67%), Query Frame = 1
Query: 1 AYGKVQHWTRNVDLFSKKFVFVPVVENMHWSLACLTNLHKLKAG-----KTKYDFGVDEEA---------PCMLFLDSLDMHHASRIYDYLRRYLQEKWRESGRKKLEFNT-----------SSFPLVRPRVPTQINGCDCGVYVLRYAK 375
A+ +V+ WTR VD+F+KKF+ VPVVE++HWSLA + + +L + + D G E+ PC++ +DSL MH A +I +LR +L+ +WR+ + F + L P+VP Q N CDCGVY LRY +
Sbjct: 162 AHARVERWTRGVDVFAKKFLLVPVVEDLHWSLAIVCHPGELAKRAVARERRELDVGATEDEXXXXDCPARPCVIHMDSLRMHSAKKIEKWLRCFLEMEWRKRHSDEEPFTLRERTARAGGPPADLLLAMPKVPQQTNSCDCGVYTLRYGQ 311
BLAST of mRNA_S-dermatodea_contig10625.438.1 vs. uniprot
Match: W4FEY7_9STRA (ULP_PROTEASE domain-containing protein n=12 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FEY7_9STRA) HSP 1 Score: 102 bits (255), Expect = 5.590e-23 Identity = 50/124 (40.32%), Postives = 77/124 (62.10%), Query Frame = 1
Query: 1 AYGKVQHWTRNVDLFSKKFVFVPVVENMHWSLACLTNLHKLKAGKTKYDFGVDEEAPCMLFLDSLDMHHASRIYDYLRRYLQEKWRESGRKKLEFNTSSFPLVRPRVPTQINGCDCGVYVLRYA 372
++ K++ WT+NV +F+ +F+FVP+ +N HWSLA + N L + G APC+LF DSL+ H+ +I L+ YL++++ +S + F+ + LV P VP Q N CDCGV+VL YA
Sbjct: 462 SFDKIRRWTKNVSIFTHRFLFVPINDNCHWSLAVICNPGSLAQPPFVEERG--NAAPCILFFDSLNCHNKVKIVATLQAYLEKEF-QSRHPEYSFDATRATLVEPEVPRQTNSCDCGVFVLLYA 582
BLAST of mRNA_S-dermatodea_contig10625.438.1 vs. uniprot
Match: A0A8J2SX84_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SX84_9STRA) HSP 1 Score: 102 bits (253), Expect = 9.080e-23 Identity = 55/150 (36.67%), Postives = 82/150 (54.67%), Query Frame = 1
Query: 1 AYGKVQHWTRNVDLFSKKFVFVPVVENMHWSLACLTNLHKLKAG-----KTKYDFGVDEEA---------PCMLFLDSLDMHHASRIYDYLRRYLQEKWRESGRKKLEFNT-----------SSFPLVRPRVPTQINGCDCGVYVLRYAK 375
A+ +V+ WTR VD+F+KKF+ VPVVE++HWSLA + + +L + + D G E+ PC++ +DSL MH A +I +LR +L+ +WR+ + F + L P+VP Q N CDCGVY LRY +
Sbjct: 321 AHARVERWTRGVDVFAKKFLLVPVVEDLHWSLAIVCHPGELAKRAVARERRELDVGATEDEXXXXDCPARPCVIHMDSLRMHSAKKIEKWLRCFLEMEWRKRHSDEEPFTLRERTARAGGPPADLLLAMPKVPQQTNSCDCGVYTLRYGQ 470
BLAST of mRNA_S-dermatodea_contig10625.438.1 vs. uniprot
Match: A0A7S3JWX9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JWX9_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.150e-22 Identity = 54/150 (36.00%), Postives = 86/150 (57.33%), Query Frame = 1
Query: 1 AYGKVQHWTRNVDLFSKKFVFVPVVENMHWSLA-----------CLTNLHKLKAGKTKYDFGVD-----------EEAPCMLFLDSLDMHHASRIYDYLRRYLQEKWRESGRKKLE--FNTSSFPLVRP-RVPTQINGCDCGVYVLRYAK 375
A+ +V+ WTR +D+F KF+ VPVV+ +HWSLA C T+++ +K T D VD E PC++F+DSL MH + ++ ++ +L E++R+ K ++ F T PL+ ++P Q NG DCG++VLRYA+
Sbjct: 174 AHKRVERWTRRLDIFKLKFIMVPVVQQLHWSLAVICHPDRIVDMCETHINHVKKKGTTADDAVDIDVDDEDEEIDPEQPCVVFMDSLKMHKENEVFKAIKAWLCEEYRKKKGKDIQCLFETKKIPLIADLKLPRQKNGWDCGLFVLRYAR 323
BLAST of mRNA_S-dermatodea_contig10625.438.1 vs. uniprot
Match: A0A7S3JWU2_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JWU2_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.450e-22 Identity = 54/150 (36.00%), Postives = 86/150 (57.33%), Query Frame = 1
Query: 1 AYGKVQHWTRNVDLFSKKFVFVPVVENMHWSLA-----------CLTNLHKLKAGKTKYDFGVD-----------EEAPCMLFLDSLDMHHASRIYDYLRRYLQEKWRESGRKKLE--FNTSSFPLVRP-RVPTQINGCDCGVYVLRYAK 375
A+ +V+ WTR +D+F KF+ VPVV+ +HWSLA C T+++ +K T D VD E PC++F+DSL MH + ++ ++ +L E++R+ K ++ F T PL+ ++P Q NG DCG++VLRYA+
Sbjct: 374 AHKRVERWTRRLDIFKLKFIMVPVVQQLHWSLAVICHPDRIVDMCETHINHVKKKGTTADDAVDIDVDDEDEEIDPEQPCVVFMDSLKMHKENEVFKAIKAWLCEEYRKKKGKDIQCLFETKKIPLIADLKLPRQKNGWDCGLFVLRYAR 523
BLAST of mRNA_S-dermatodea_contig10625.438.1 vs. uniprot
Match: A0A7S3XZ20_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZ20_HETAK) HSP 1 Score: 95.9 bits (237), Expect = 9.130e-22 Identity = 55/126 (43.65%), Postives = 73/126 (57.94%), Query Frame = 1
Query: 4 YGKVQHWTRNVDLFSKKFVFVPVVENMHWSLACLTNLHKLKAGKTKYDFGVDEEAPCMLFLDSLDMHHASRIYDYLRRYLQEKWRES--GRKKLEFNTSSFPLVRPRVPTQINGCDCGVYVLRYAK 375
+ V+ WTR V+LF+K+ VFVPV + HWSLA + + L +FG PC+L LDSL +H + LR YL ++ + G + F S+ PLVRP VP+Q N DCGVYVL YAK
Sbjct: 55 HAAVRRWTRGVNLFAKRLVFVPVNQAAHWSLAVVCSPGHLAISPE--EFG----EPCVLHLDSLRLHSGKEVARRLRGYLALEYEKQYPGGGPVAFTASTMPLVRPPVPSQGNTSDCGVYVLEYAK 174 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10625.438.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10625.438.1 >prot_S-dermatodea_contig10625.438.1 ID=prot_S-dermatodea_contig10625.438.1|Name=mRNA_S-dermatodea_contig10625.438.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=125bp AYGKVQHWTRNVDLFSKKFVFVPVVENMHWSLACLTNLHKLKAGKTKYDFback to top mRNA from alignment at S-dermatodea_contig10625:3015..7723+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10625.438.1 ID=mRNA_S-dermatodea_contig10625.438.1|Name=mRNA_S-dermatodea_contig10625.438.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4709bp|location=Sequence derived from alignment at S-dermatodea_contig10625:3015..7723+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10625:3015..7723+ >mRNA_S-dermatodea_contig10625.438.1 ID=mRNA_S-dermatodea_contig10625.438.1|Name=mRNA_S-dermatodea_contig10625.438.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=750bp|location=Sequence derived from alignment at S-dermatodea_contig10625:3015..7723+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |