mRNA_S-dermatodea_contig10617.429.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig10617.429.1
Unique NamemRNA_S-dermatodea_contig10617.429.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig10617.429.1 vs. uniprot
Match: D8LLR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLR2_ECTSI)

HSP 1 Score: 438 bits (1126), Expect = 4.170e-138
Identity = 224/268 (83.58%), Postives = 241/268 (89.93%), Query Frame = 1
Query:    1 WQAVDEVNKKDYALKMVRIPRGRSGQLANGEARVAEMAVVEQSVVRSLPTNHPNIVRFHDAGISKADNEIRYFILSEYCPSNVLKKMSVAADQGGLLAETEVLLIFRDTLMAVLYLHSRVPPIAHRRELDLKVDNLLVGRDGLIKLCDFGSCSTTHRAFFGAQDIQAASEDIRRNTTPEYRSPEQVDLSRGYVVSEKVDIWALGVILYRLAFFTTPFEDNKGNVEASAILRGLSDRKIHQEHRYSHGLVSLIRCCLVVDPERRPTIGQ 804
            ++AVDEVNKKD+ALKMVRIPR RSGQLAN E  VAEMAVVEQSVVRSLP NHPNIV+FHDAGISKADNEIRYFILSEYCPSNVLKKMS AADQG LL ETEVLLIFRDTLMAVLYLHSR PPIAHR   DLKVDNLLVGRDGLIKLCDFGSCST H+A+   +++Q A+EDIRRNTT  YRSPEQVDL +G+VVSEKVDIWALGVIL++LAFF TPFEDNKGNV+A AIL+GL D+KI QE RYS GLVSLIRCCLVVDP RRPTIGQ
Sbjct:   29 YKAVDEVNKKDFALKMVRIPRSRSGQLANEE--VAEMAVVEQSVVRSLPNNHPNIVKFHDAGISKADNEIRYFILSEYCPSNVLKKMSGAADQGSLLPETEVLLIFRDTLMAVLYLHSRDPPIAHR---DLKVDNLLVGRDGLIKLCDFGSCSTQHKAYLSPKELQLANEDIRRNTTAAYRSPEQVDLFQGHVVSEKVDIWALGVILFKLAFFQTPFEDNKGNVDAGAILKGLGDKKIPQEKRYSAGLVSLIRCCLVVDPARRPTIGQ 291          
BLAST of mRNA_S-dermatodea_contig10617.429.1 vs. uniprot
Match: A0A6H5JEL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL9_9PHAE)

HSP 1 Score: 385 bits (989), Expect = 2.990e-119
Identity = 201/268 (75.00%), Postives = 218/268 (81.34%), Query Frame = 1
Query:    1 WQAVDEVNKKDYALKMVRIPRGRSGQLANGEARVAEMAVVEQSVVRSLPTNHPNIVRFHDAGISKADNEIRYFILSEYCPSNVLKKMSVAADQGGLLAETEVLLIFRDTLMAVLYLHSRVPPIAHRRELDLKVDNLLVGRDGLIKLCDFGSCSTTHRAFFGAQDIQAASEDIRRNTTPEYRSPEQVDLSRGYVVSEKVDIWALGVILYRLAFFTTPFEDNKGNVEASAILRGLSDRKIHQEHRYSHGLVSLIRCCLVVDPERRPTIGQ 804
            ++AVDEVNKKD+ALKMVRIPR RSG+ ANGE  VAEMA VEQS+VRSLP NHPNIV+FHDAGISK D+EIRYFILSEYCPSNVLKKMS AADQG LL ETEVLLIFRDTLMAV                    DNLLVGRDGLIKLCDFGSCST H+AF   ++   A EDI RNTT  YRSPEQVDL +G+VVSEKVDIWALGVIL++LAFF TPFEDNKGNV+   IL+GL D+KI QEHRYS GLVSLIRCCLVVDP RRPTIGQ
Sbjct:   29 YKAVDEVNKKDFALKMVRIPRTRSGKPANGE--VAEMAFVEQSMVRSLPNNHPNIVKFHDAGISKTDSEIRYFILSEYCPSNVLKKMSGAADQGNLLPETEVLLIFRDTLMAV--------------------DNLLVGRDGLIKLCDFGSCSTQHKAFLSRKEALIAHEDILRNTTAAYRSPEQVDLFQGHVVSEKVDIWALGVILFKLAFFQTPFEDNKGNVDLEGILKGLGDKKIPQEHRYSAGLVSLIRCCLVVDPARRPTIGQ 274          
BLAST of mRNA_S-dermatodea_contig10617.429.1 vs. uniprot
Match: A0A835YQI3_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQI3_9STRA)

HSP 1 Score: 249 bits (637), Expect = 4.470e-79
Identity = 129/260 (49.62%), Postives = 182/260 (70.00%), Query Frame = 1
Query:   28 KDYALKMVRIPRGRSGQLANGEARVAEMAVVEQSVVRSLPTNHPNIVRFHDAGISKADNEIRYFILSEYCPSNVLKKMSVAADQ-GGLLAETEVLLIFRDTLMAVLYLHSRVPPIAHRRELDLKVDNLLVGRDGLIKLCDFGSCSTTHRAFFGAQDIQAASEDIRRNTTPEYRSPEQVDLSRGYVVSEKVDIWALGVILYRLAFFTTPFEDNKGNVEASAILRGLSDRKIHQEHRYSHGLVSLIRCCLVVDPERRPTIGQ 804
            KDYALK+  +PR R+G +AN EA  AE A +EQ++++ +   HPN++   D+G+ K DNEIRY IL EYCP  VL  ++ A       L E +++LI RDTL A+ +LH++ PPIAHR   DL+V+NLLV   G ++LC+FGSCS  HR+F  ++DI  A E+IRR T P YR+PEQVDL  G++VSE+VDIWA+GV+L++LAF  TPFED++G+V+  AIL G    ++ + H YS GL +L++ C+   P+ RP+  Q
Sbjct:   39 KDYALKVTWVPRDRNGAVANEEA--AETASLEQTILKRI-CPHPNVIEVLDSGMLKEDNEIRYHILIEYCPRTVLGHLTEARKAPSNYLPERDIMLILRDTLSALQHLHAQTPPIAHR---DLRVENLLVDVRGRVRLCNFGSCSLRHRSFAASRDIALAKEEIRRRTAPAYRAPEQVDLHLGHMVSERVDIWAVGVLLHKLAFGATPFEDSRGDVQNLAILGGFRVDRLPEAHPYSSGLCALLQLCMNPIPQARPSCAQ 292          
BLAST of mRNA_S-dermatodea_contig10617.429.1 vs. uniprot
Match: A0A835YHI7_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHI7_9STRA)

HSP 1 Score: 241 bits (615), Expect = 3.220e-76
Identity = 131/233 (56.22%), Postives = 167/233 (71.67%), Query Frame = 1
Query:    1 WQAVDEVNKKDYALKMVRIPRGRSGQLANGEARVAEMAVVEQSVVRSLPTNHPNIVRFHDAGISKADNEIRYFILSEYCPSNVLKKMSVAA-DQGGLLAETEVLLIFRDTLMAVLYLHSRVPPIAHRRELDLKVDNLLVGRDGLIKLCDFGSCSTTHRAFFGAQDIQAASEDIRRNTTPEYRSPEQVDLSRGYVVSEKVDIWALGVILYRLAFFTTPFEDNKGNVEASAILRG 696
            ++  DE+ K +YALK+VR+ R R G     E   AEMA +EQ+VV+ L   HPNIV   D G +  D+E+RY ILSE+CP +VL  +S A     G L E +++ I RDTLMA+L++HS+ PPIAHR   DLKV+NLL+G DG  KLCDFGSCS THRAF GA+D   A E+IRR TTP YR+PEQVDL  G+VVSE+VD+WALGV+L++LAF  TPFED +G+V+   IL G
Sbjct:   31 YKGEDELGK-EYALKIVRVARERGGGPVVDE-EAAEMASLEQTVVKRL-CPHPNIVEAFDCGTTWEDSEVRYHILSEFCPRSVLGMLSDARRGPAGHLPERDIMWILRDTLMALLHMHSQSPPIAHR---DLKVENLLIGADGRCKLCDFGSCSVTHRAFAGARDAALAKEEIRRRTTPAYRAPEQVDLHLGHVVSERVDVWALGVLLFKLAFGATPFEDARGDVQNLGILGG 257          
BLAST of mRNA_S-dermatodea_contig10617.429.1 vs. uniprot
Match: A0A7S1XJ07_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJ07_9STRA)

HSP 1 Score: 176 bits (446), Expect = 2.590e-50
Identity = 97/224 (43.30%), Postives = 134/224 (59.82%), Query Frame = 1
Query:   28 KDYALKMVRIPRGRSGQLANGEARVAEMAVVEQSVVRSLPTNHPNIVRFHDAGISKADNEIRYFILSEYCPSNVLKKMSVAADQGGLLAETEVLLIFRDTLMAVLYLHSRVPPIAHRRELDLKVDNLLVGRDGLIKLCDFGSCSTTHRAFFGAQDIQAASEDIRRNTTPEYRSPEQVDLSRGYVVSEKVDIWALGVILYRLAFFTTPFEDNKGNVEASAILRGL 699
            K Y LK +R+P+            + ++A  EQ + RSL   HPN+V  +   I     +  Y+IL E C  NV + +    ++   L +  VL + RD  +A+ +LH R PP+AHR   D+KV+N+L+G  G+ K+CDFGS +TTH        I   +E+I RNTT  YR+PEQVDL R   VSEKVDIWALG ++Y+L +F TPFEDN+GNVE   IL G+
Sbjct:   52 KRYILKRMRVPKNHED--------LVKIAQKEQEICRSLAP-HPNVVEIYGTHIMDIGQDWDYYILMEACQGNVAELVLGHYNRTTYLQQDLVLRVLRDVALALEHLHEREPPLAHR---DIKVENVLLGPGGVFKVCDFGSGTTTHYTVTDTSKIPLIAEEISRNTTLAYRAPEQVDLYRQQPVSEKVDIWALGCMIYKLCYFRTPFEDNQGNVEKIGILNGI 263          
BLAST of mRNA_S-dermatodea_contig10617.429.1 vs. uniprot
Match: A0A7R9YG02_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YG02_9STRA)

HSP 1 Score: 181 bits (460), Expect = 2.770e-48
Identity = 107/269 (39.78%), Postives = 145/269 (53.90%), Query Frame = 1
Query:   25 KKDYALKMVRIPRGRSGQLANGEARVAEMAVVEQSVVRSLPTNHPNIVRFHDAGISKADNEIRYFILSEYCPSNVLKKMSVAADQGGLLAETEVLLIFRDTLMAVLYLHSRVPPIAHRRELDLKVDNLLVGRDGLIKLCDFGSCSTTHRAFFGAQDIQAASEDIRRNTTPEYRSPEQVDLSRGYVVSEKVDIWALGVILYRLAFFTTPFEDNKGNVEASAILRGLS---------DRKIHQEHRYSHGLVSLIRCCLVVDPERRPTIGQ 804
            +K Y LK +R+P+          A +  +A  EQ + R L   HPN+V F    +     +  Y+IL E C  NV + +     Q   L++  VL I RDTL+A+ +LH R  PIAHR   D+KV+N+LVG DG  KLCDFGS +T H        I   +E+I RNTT  YR+PEQVDL R   +SEKVDIWA+G +L+++ +F TP+ED  GNVE   IL G            R       ++  LV  I+  +   P  RP+ GQ
Sbjct:   40 RKCYILKRMRVPKDH--------AELNRIAGHEQKICRQLAP-HPNVVEFFGTHVVDIGRDWDYYILMEACRGNVAELVHAQYRQTRFLSQRNVLSILRDTLVALEFLHERPLPIAHR---DIKVENMLVGYDGTYKLCDFGSATTVHHTVTDTAKIPLIAEEISRNTTLAYRAPEQVDLYRQDPLSEKVDIWAVGCMLFKMMYFRTPYEDTSGNVEKIGILNGADGLRFPPPVLQRAGFPNPPFTQSLVDFIKISMTQKPTERPSAGQ 296          
BLAST of mRNA_S-dermatodea_contig10617.429.1 vs. uniprot
Match: A0A2G3DGJ4_CAPCH (Protein kinase domain-containing protein n=2 Tax=Capsicum TaxID=4071 RepID=A0A2G3DGJ4_CAPCH)

HSP 1 Score: 164 bits (415), Expect = 1.630e-45
Identity = 103/260 (39.62%), Postives = 151/260 (58.08%), Query Frame = 1
Query:   28 KDYALKMVRIPRGRSGQLANGEARVAEMAVVEQSVVRSLPTNHPNIVRFHDAGISKADNEIRYFILSEYCPSNVLKKMSVAADQG-GLLAETEVLLIFRDTLMAVLYLHSRVPPIAHRRELDLKVDNLLVGRDGLIKLCDFGSCSTTHRAFFGAQDIQAASEDIRRNTTPEYRSPEQVDLSRGYVVSEKVDIWALGVILYRLAFFTTPFEDNKGNVEASAILRGLSDRKIHQEHRYSHGLVSLIRCCLVVDPERRPTIGQ 804
            K YALK +         + N E  + ++ + E SV++SL   HPNIV  H   I          ++ EYC  +++   SV  ++G G   E +VLLIFRD   AV  +H + PPIAHR   DLK +NLL+G DGL KLCDFGS ST H+ F   +++    ++IR++TTP YR+PE  DL R  +++EKVDIWALG +L+R+ +F + F D +  ++   +L G  + +I +  +Y   ++ LIR  L   P+ RP I Q
Sbjct:   52 KQYALKHI---------IVNDEESL-DLVLKEISVMKSLK-GHPNIVTLHAHAILDVGRTKEALLVMEYCDQSLV---SVLENRGAGFFEEKQVLLIFRDVCNAVFAMHCQSPPIAHR---DLKAENLLLGADGLWKLCDFGSTSTNHKRFEKPEEMGIEEDNIRKHTTPAYRAPEMWDLYRRELINEKVDIWALGCLLFRICYFKSAF-DGESKLQ---VLNG--NYRIPELPKYRASIIDLIRDMLQSSPDARPDITQ 288          
BLAST of mRNA_S-dermatodea_contig10617.429.1 vs. uniprot
Match: A0A8B8ZY06_PHODC (probable serine/threonine-protein kinase DDB_G0276461 isoform X1 n=3 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B8ZY06_PHODC)

HSP 1 Score: 160 bits (406), Expect = 3.940e-44
Identity = 104/270 (38.52%), Postives = 150/270 (55.56%), Query Frame = 1
Query:    1 WQAVDEVNK-KDYALKMVRIPRGRSGQLANGEARVAEMAVVEQSVVRSLPTNHPNIVRFHDAGISKADNEIRYFILSEYCPSNVLKKMSVAADQG-GLLAETEVLLIFRDTLMAVLYLHSRVPPIAHRRELDLKVDNLLVGRDGLIKLCDFGSCSTTHRAFFGAQDIQAASEDIRRNTTPEYRSPEQVDLSRGYVVSEKVDIWALGVILYRLAFFTTPFEDNKGNVEASAILRGLSDRKIHQEHRYSHGLVSLIRCCLVVDPERRPTIGQ 804
            + A D VN  K YALK V    G S  L           V+++  V  L   HPN+V      I      +   ++ E+C  +++   +V  ++G G   E ++LLIFRD   AV  +H + PPIAHR   DLK +N+L+G DG  KLCDFGS ST H+ F   +++    ++IR++TTP YR+PE  DL R  V+SEKVDIWALG +LYR+ +F + F D +  ++   IL G  + +I    ++S  + SLI+  L   P+ RP I Q
Sbjct:   42 YLARDAVNSSKQYALKHVICQDGESLDL-----------VMKEISVMKLLKGHPNVVMLVAHAILDMGRTMEAMLVMEFCEKSLV---TVLENRGAGYFEEKKILLIFRDVCNAVFAMHCQSPPIAHR---DLKAENVLLGADGAWKLCDFGSTSTNHKCFNRPEEMGIEEDNIRKHTTPAYRAPEMWDLYRREVISEKVDIWALGCLLYRICYFKSAF-DGESKLQ---ILNG--NYRIPDSPKFSASVTSLIKDMLEASPDARPNITQ 288          
BLAST of mRNA_S-dermatodea_contig10617.429.1 vs. uniprot
Match: D8TCP1_SELML (Protein kinase domain-containing protein n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8TCP1_SELML)

HSP 1 Score: 160 bits (405), Expect = 5.970e-44
Identity = 103/268 (38.43%), Postives = 148/268 (55.22%), Query Frame = 1
Query:    1 WQAVDEVNKKDYALKMVRIPRGRSGQLANGEARVAEMAVVEQSVVRSLPTNHPNIVRFHDAGISKADNEIRYFILSEYCPSNVLKKMSVAADQGGLLAETEVLLIFRDTLMAVLYLHSRVPPIAHRRELDLKVDNLLVGRDGLIKLCDFGSCSTTHRAFFGAQDIQAASEDIRRNTTPEYRSPEQVDLSRGYVVSEKVDIWALGVILYRLAFFTTPFEDNKGNVEASAILRGLSDRKIHQEHRYSHGLVSLIRCCLVVDPERRPTIGQ 804
            + A D  + K+YALK +      S  L   E           +V+++L   HPNIV  H   +         F++ +YC   ++  +   A   G   E ++L IFRD   AV  +H + PPIAHR   DLK +N+L+G +GL KLCDFGS ST HR F  A+++    + IR++TTP YR+PE  DL +  ++SEKVDIWALG +LYRL FF + F D +  ++   IL G  + +I +  RYS  +  LI+  L+  P+ RP I Q
Sbjct:   42 YLARDAQSGKNYALKHLICNDDESLHLVRKEV----------AVMKAL-RGHPNIVTLHAHAVLANGRTKECFLVMDYCEKTLVAVLD--ARGAGFFEERQLLSIFRDICNAVYAMHCQSPPIAHR---DLKAENILLGANGLWKLCDFGSISTNHRRFERAEEMGVEEDIIRKHTTPAYRAPEMWDLYQRELISEKVDIWALGCLLYRLCFFKSAF-DGESKLQ---ILNG--NYRIPEAPRYSENITQLIKDMLMPSPDSRPDILQ 287          
BLAST of mRNA_S-dermatodea_contig10617.429.1 vs. uniprot
Match: A0A4D8Y9F5_SALSN (AP2-associated kinase n=1 Tax=Salvia splendens TaxID=180675 RepID=A0A4D8Y9F5_SALSN)

HSP 1 Score: 157 bits (397), Expect = 4.900e-43
Identity = 105/270 (38.89%), Postives = 151/270 (55.93%), Query Frame = 1
Query:    1 WQAVDEVNK-KDYALKMVRIPRGRSGQLANGEARVAEMAVVEQSVVRSLPTNHPNIVRFHDAGISKADNEIRYFILSEYCPSNVLKKMSVAADQG-GLLAETEVLLIFRDTLMAVLYLHSRVPPIAHRRELDLKVDNLLVGRDGLIKLCDFGSCSTTHRAFFGAQDIQAASEDIRRNTTPEYRSPEQVDLSRGYVVSEKVDIWALGVILYRLAFFTTPFEDNKGNVEASAILRGLSDRKIHQEHRYSHGLVSLIRCCLVVDPERRPTIGQ 804
            + A D VN  K YALK +         + N E    E+   E SV+++L T HPN+V      +          +L EYC  +++   +V   +G G   E +VL IFRD   AV  +H + PPIAHR   DLK +NLL+G DGL KLCDFGS ST H+ F   +++    ++IR++TTP YR+PE  DL R  +++EKVDIWALG +L+R+ +    F D +  ++   IL G  + +I  + +Y+  L+ LIR  L   P+ RP I Q
Sbjct:   42 YLARDAVNGFKQYALKHI---------ICNDEES-QELVTKEISVMKTL-TGHPNVVTLLAHAVFDMGRTKEALLLMEYCEKSLV---NVLEGRGAGYFEEKQVLTIFRDICTAVFVMHCQTPPIAHR---DLKAENLLLGSDGLWKLCDFGSTSTNHKRFEKPEEMGIEEDNIRKHTTPAYRAPEMWDLFRRELINEKVDIWALGCLLFRICYLKLAF-DGESKLQ---ILNG--NYRIPDQPKYTTLLIDLIRDMLQSSPDDRPDITQ 288          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10617.429.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLR2_ECTSI4.170e-13883.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JEL9_9PHAE2.990e-11975.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YQI3_9STRA4.470e-7949.62Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A835YHI7_9STRA3.220e-7656.22Kinase-like domain-containing protein (Fragment) n... [more]
A0A7S1XJ07_9STRA2.590e-5043.30Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7R9YG02_9STRA2.770e-4839.78Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A2G3DGJ4_CAPCH1.630e-4539.62Protein kinase domain-containing protein n=2 Tax=C... [more]
A0A8B8ZY06_PHODC3.940e-4438.52probable serine/threonine-protein kinase DDB_G0276... [more]
D8TCP1_SELML5.970e-4438.43Protein kinase domain-containing protein n=1 Tax=S... [more]
A0A4D8Y9F5_SALSN4.900e-4338.89AP2-associated kinase n=1 Tax=Salvia splendens Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10617contigS-dermatodea_contig10617:1534..7956 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score439.9
Seed ortholog evalue8.6e-121
Seed eggNOG ortholog2880.D8LLR2
Preferred nameATMRK1
KEGG koko:K04424,ko:K16799
KEGG Pathwayko04010,ko04341,map04010,map04341
KEGG ModuleM00678
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004485,GO:0004672,GO:0004674,GO:0004712,GO:0004713,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0007275,GO:0008150,GO:0008152,GO:0009791,GO:0009987,GO:0010154,GO:0010344,GO:0016020,GO:0016301,GO:0016310,GO:0016421,GO:0016740,GO:0016772,GO:0016773,GO:0016874,GO:0016885,GO:0018108,GO:0018193,GO:0018212,GO:0019538,GO:0022414,GO:0023052,GO:0031974,GO:0032501,GO:0032502,GO:0035556,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0061458,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0071944,GO:0140096,GO:1901564
EggNOG free text desc.clathrin-coated pit assembly
EggNOG OGsCOG0515@1,KOG0192@2759,KOG1989@1,KOG1989@2759
EC2.7.11.25
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSH3 domain
Ec32 orthologEc-04_004810.2
Exons6
Model size805
Cds size804
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10617.429.1prot_S-dermatodea_contig10617.429.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig10617 1534..7955 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924166.0315232-CDS-S-dermatodea_contig10617:1533..16321622924166.0315232-CDS-S-dermatodea_contig10617:1533..1632Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10617 1534..1632 +
1694079062.9711967-CDS-S-dermatodea_contig10617:1533..16321694079062.9711967-CDS-S-dermatodea_contig10617:1533..1632Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10617 1534..1632 +
1622924166.0458395-CDS-S-dermatodea_contig10617:2299..24731622924166.0458395-CDS-S-dermatodea_contig10617:2299..2473Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10617 2300..2473 +
1694079062.9809642-CDS-S-dermatodea_contig10617:2299..24731694079062.9809642-CDS-S-dermatodea_contig10617:2299..2473Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10617 2300..2473 +
1622924166.055313-CDS-S-dermatodea_contig10617:3641..37541622924166.055313-CDS-S-dermatodea_contig10617:3641..3754Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10617 3642..3754 +
1694079062.9881458-CDS-S-dermatodea_contig10617:3641..37541694079062.9881458-CDS-S-dermatodea_contig10617:3641..3754Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10617 3642..3754 +
1622924166.0676215-CDS-S-dermatodea_contig10617:4493..45961622924166.0676215-CDS-S-dermatodea_contig10617:4493..4596Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10617 4494..4596 +
1694079062.9955692-CDS-S-dermatodea_contig10617:4493..45961694079062.9955692-CDS-S-dermatodea_contig10617:4493..4596Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10617 4494..4596 +
1622924166.0775151-CDS-S-dermatodea_contig10617:5365..55871622924166.0775151-CDS-S-dermatodea_contig10617:5365..5587Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10617 5366..5587 +
1694079063.0027874-CDS-S-dermatodea_contig10617:5365..55871694079063.0027874-CDS-S-dermatodea_contig10617:5365..5587Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10617 5366..5587 +
1622924166.089047-CDS-S-dermatodea_contig10617:7862..79551622924166.089047-CDS-S-dermatodea_contig10617:7862..7955Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10617 7863..7955 +
1694079063.0105162-CDS-S-dermatodea_contig10617:7862..79551694079063.0105162-CDS-S-dermatodea_contig10617:7862..7955Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10617 7863..7955 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig10617.429.1

>prot_S-dermatodea_contig10617.429.1 ID=prot_S-dermatodea_contig10617.429.1|Name=mRNA_S-dermatodea_contig10617.429.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=268bp
WQAVDEVNKKDYALKMVRIPRGRSGQLANGEARVAEMAVVEQSVVRSLPT
NHPNIVRFHDAGISKADNEIRYFILSEYCPSNVLKKMSVAADQGGLLAET
EVLLIFRDTLMAVLYLHSRVPPIAHRRELDLKVDNLLVGRDGLIKLCDFG
SCSTTHRAFFGAQDIQAASEDIRRNTTPEYRSPEQVDLSRGYVVSEKVDI
WALGVILYRLAFFTTPFEDNKGNVEASAILRGLSDRKIHQEHRYSHGLVS
LIRCCLVVDPERRPTIGQ
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mRNA from alignment at S-dermatodea_contig10617:1534..7956+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig10617.429.1 ID=mRNA_S-dermatodea_contig10617.429.1|Name=mRNA_S-dermatodea_contig10617.429.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6423bp|location=Sequence derived from alignment at S-dermatodea_contig10617:1534..7956+ (Saccorhiza dermatodea SderLu1190fm monoicous)
TGGCAGGCTGTTGACGAGGTTAACAAGAAGGACTACGCGCTGAAGATGGT GCGGATCCCGCGAGGGCGTTCAGGGCAGCTGGCGAACGGAGAGGCAAGGG TTTTTATTTTTATTGTTTGATTGGTTGATTGATTGATTGATTGATTGATT GGTTGATTGATTAATTGATGATTGATTGATTGATTTGACTGATTGATCTT GATTTTGATATTGTTTGCTTTTTGCATTGATTGATTTTTCTTTATTTTTT GTTTGCTTGATGGATTGATTGATTGATTTTTTGTTTTTGTTTTTTTTGTT TTATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTG ATTGATTGATTGACTGACTGTATTTAGTTACTTTGTTAATTGAATTACTG CTTTGGTTTGATTTTTCTTATTGACTTTTTACTGATCGATTGGTTTGTTT TTATTTTTTTGTTGATTTGACTGTTTGGCCTCACGCTTACAACCGACCGA CCGGCCCGCTATAATAGTTATGCTAATGGTTGCCGATCCCGCCCACTTTT TAATCTAAATGTACATGGATCTCTTAATAGTGTCTGTGAAGCCCTTTCGA TTTTTTGCATCAAGAGCTTTTTACTCTAAAGCCCTACTTCGCATATATTT CGCATCAAGGGGCCACCTCTAAATCTACTCTAAAACATCGTTCAACGCGC TTATCACACTATACTACTATAATAATTATATTAAAGACATAACTATTCAT GGTGTGTAAACCTCAGGTGGCGGAGATGGCCGTGGTGGAGCAGTCGGTTG TTCGATCGCTGCCGACGAATCACCCAAACATCGTCAGGTTCCACGACGCG GGGATCAGCAAGGCTGACAACGAGATACGCTACTTCATTCTGTCGGAGTA CTGCCCCAGCAACGTGCTCAAGAAAATGAGCGTAGCGGCGGTGAGACAAG GCAGCGAACGTTTTATTTCTATTTTTTTATGGGGTGGGTTCAGGTCGGTT CGGTTCGGTTAGGTTAGGTTGGGGTCGGTTCGGTTCGGTTAGGTTTGGTT TGGTTATAGGATGGGTTCGGTTGGGGTGGGGTGGGGGGAGGGAGTTCTTA TGTATGGGGTGGGTTCGATTCGGTTCGGTTCGGTTGGGGTCGGTTTGGTT GTTTCGGTTACGTTAGGTTACGTTAGGTTACGTTAGGTTTGTTTTGGTTA TAGGTTAGGTTCGGTTAGGTCGGGTTCGGTTGGGCTGGGGTCGGTTCGGT TTGGTTTGTTTTGGTTTGGTTCGGTTTGGTTTGATTCGGTTATAGATTCG GTTAGGTTCGGTTAGGTTGGGGGGGGGGCGGGGGGGGGGGATGCACTTGT ATCTTGCATGCCTTAGCTGTTAAGACCATTGACCACGCGTCCTCGAGAGG ACGGAGACTTGTTCTCACAGGATCGATCTGTCGCCGATGGCCAATCGTTC CTTCCTACCCTGCCCAAGGCGGCGCAAACATGTTTTTTACCATCCTGTCT ACATCGGGGGAGGTTCTTACATTTTCGTGATGAGCGCCAACAACACCGGT TCGCGATCGAGTATTAATATTAGTAGTGTGAGACGTACGTATTTGGCAAC CGGTTGACAGTTGGCATTGTGAGATTTGGGTTGGCGCTGGTCGCTGGTGG GGTAGACTATTGTAGTGTAAGAGAAAAAAAAGTTCCCAACCGATTGTTGC TGGTCCTGCGGGTTGGGTAGGCTACTTACTACTGTAGTTGTTTATAAGTG TCCGTCATAACCGACCGGTCACGTGAGAACAAAAAAAAATGAAATTTATT TTCATGTTAAAACCCACTTTGCGAAATTTTTACTAAAAAAAACTCGTATG TATACTGTAATGTCATCCCCATTTACTTGTACAGTAACTGGTGTTGCTTC TTCTCGTGCGTACTATTTCGTTTCTGTCCCCCCCTTGTGCAACTGAAACG CCTCCTCTGCCGCCCTCCCTCCCTCCCTGCCTACCCTACCCTACCCGTGA CCTGACCTTACTTGACCTGACCTGACGTGACCTGACGCGACCTGACGTGA CCTGCCCTAACCTGCCCTAACCTGCCCTGCCCTGCCCTGCCCTGCCGTGC CCATCCAGGATCAAGGAGGTCTATTGGCGGAAACGGAGGTGCTCCTGATC TTTCGAGATACGCTCATGGCGGTGCTGTATCTGCACAGCCGAGTCCCACC GATAGCCCACAGGCGAGAGCTGTGTGTGTGTGTTTTTGTGTGTTGTGTCT CATTCCGTGGTGACAGCAGTTATGGTACGTGGAGCGGTCAGATCCGTCCC ACGTCGTGCTTTCATTCCATGGTACAGTATATACAGTCATGGTGCTTGTA TGTAGGAATCCATCCCAACTTTGTTTTCTGGGTTGTGTGTTTCATTCCGT GGTGACAGCAGTTAAGGATACGTGGAGCGGACAGATCCGTCCCCCATCGT GCATTCATCTCCATGGTACTACTGTCTGTTGCAGTTATAATCAGTGTATG TAGGAATCCATCCGAACATTTCTGCATTCATCAAGAACTAGTTGCAAGCC ACGGCTGTCGCCCGTGAGGTGTGCGTTGGCAGGACGATGTGCGGGTTGGG TTTGGAGGATACGGTGTGGCGACCCACGGCAGGCGTATTCGCCGCGCTCG ACCGCGGCGACCGCGCGGGCGGCGACGGGCGGCGAGTTTAGTGTACAACG TCGGCCTCAAACCGTATACTTCATATAGGAGTTCAAATCGTATAGGAGTT TAAGTGTACAATCTCGGCCTCAAAAATTGTACAGGAGTTTATTTTAAGTG TTGTGGTCCGCTGTGGTCCACACTAAATCACTGTGAATCGCTATTAAAAA TGGTTCACTGCAGTCCGTTGTAGTAATGAATAAGGATGAAAAAAAAAAAA TGCGTGTTGAACCATGCCTGTTCCGCCGACACGTCTGTCCTTCCCGGCGA ATTTCTCCAGAGACTTGAAGGTCGATAATCTTCTGGTGGGTCGAGATGGC CTCATCAAGCTCTGTGACTTCGGTAGCTGTAGCACGACGCACAGGGCCTT TTTCGGCGCTCAGGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTATA TAATATTAGTAGGTTAGCCACGGGCTATGTTAAAATAATAGGCTATGCTG GTGAGGTGAAAAATCCTCTAATACTCTGTGCTTCGCACAGGTTTCACCGC TGAAACTCTAAATCGCAGTTGTTTTTGTCCAGAAGAATCAACCCTAAATC GCTATTGAAAAGCGTGGATTGTTCCTTTACTTTAATTTATAAGCATGTGC GGGTATCGTGTTTTGTTTTGCTTTGTGTGTGTTGTGTTGTGTGTATGTTG TGTTGTGTTGTGTGTATGTTGTGTGTATGTTGTGTTGTGTTGTGTTGTTC TCTGTATATATTGTGCTGTGTGTGTTAGTCGGGGCTTGCTTGAGTGTGTT ATGTGTGCGTCTTTCTCGTGTGCTGCTGTCTGTGCTCGTGATTCGTGTGT GTGTTGTATGTCTGTCTGTCTCGTCTGTTGGTTCCTGCGCCCATATACAC GCCTTACGTGTGTGCGTTGTTCTGTAGTGTGGCTTTTTTATTTTGTGTGT GTTTTATGCGTGCGTCTGTCTGCCTGTGCGCTGCTGTCTGTGTTTGTGGA GTGTTTGTGTGTGTGCCTTGTCTGTGTGTGTGCCGTTTTTTTTTCTTTTT CTTTTTTTCTCTACACCCATGGTCCATTTATGCATGCCTATCTTGTTGCC TCTGTTTGTAACTTATAAAGAGATCTTTAATTAATCCCCACCCCGCACCG AAAAACAAATGCCTCCTATCATGCACGAGCAGGACATCCAGGCGGCCAGT GAGGATATTCGGAGGAACACCACTCCGGAGTACCGATCGCCGGAGCAGGT GGACCTGTCCCGAGGGTATGTGGTGAGCGAGAAGGTTGATATCTGGGCGC TGGGGGTGATCCTGTACAGGCTGGCGTTCTTCACGACTCCGTTCGAAGAC AATAAGGGGAACGTTGAGGCCTCGGCGATACTCAGGGGGTTGTCCGATCG CAAGGTGCGTGTATGTGTGTATGTGTGTGTATGGGTGTGTATGTGTAGGA GTTGTGCGGTATGTGTGTGTGTGTGTGTGTGTGGATGTGTATATGTGTGG GAGTTGTGCGGTAAGCCTACGCGATATTTTACGAAGGACCCACGATAGTT GTGTATAGGTGTGTGCGTGTATGTTTGTATGTGGGTGTATGTGTGTATGT GTGGGAGTTGTGCGGTAAGTGTGTGTGTGTGTGTGTGTGTGTAGTCTGTA TGTGTGGGAGTTGTGCGGTAAGCCTGCGCGATATTTTACGAAGGACCCAC GATAGTTGACAGGACCAGTACGTCAGATTTCTCGAATGGTGTAATATTTC GGGGATGATCGTTGTGCCAAGGTGGTGTCATTCACATTTTTTTGGCCAGA CCTCGCTTCCGGTTCTTCGTTTCTTCTTTTTTGGGTGATGCTGTGTTGGT TTGGGTAGATATGGTACGTCATCGTTGGGGGACAGCAGTAGGGTGGGTTA CTGGCTCGGATATCACAGTCGGCCCTAGTTTGTGTCAAAAGTTCAATTCT AAATCGCTATTAAAAAACTTGCAAAGAAAACGCTATTAACCCTTTGGTAC TATAGTATGAATACTATCCTATATTGTTAGTAGTAGGGCTCTCGGAAACG ACCAAAAGCTCTCTGGATGCCAGTCGACAGCTACGACAGCCCCGGTTGGT TGGTTCCCTTAGGCTCCTTTACTTCTCGTATCCTGCGCCATAAGCAGTGG GTTTCGGTCCCCAGGGCTCCGCTTCAAGCACGCCTCATTGCGTGCTAACC AGCTCTCTAAACAGGGGGCTAGTACCAAAAGGGTTAAGCAATGAAAAAAT ATTTGTGCATGGAAAATAATTAACAAACGCTCGGAAACAGAGGGGATATA TAATAGGCACCTCGGAACTCAGGTGTGCTGCATAAAAATAACAGCAGCCC CCGTCTCCTAAGGCGCACATGTACTGCAAGTTGGATCGTACTTACCATAC CACACGATCACTGCTTTGTTTTTTTTTTTAACTTTTGCAGAAGATACCGC ACCGCCGTGTGTGCGCGCGCATACTCTGTGTAGTGCGTGCAATGATGCAC CTGGTTTGCAAAAAGGTTTGATAGTATGAGCTATAATATAATGTAACCAC AAACGATTAATAGTACTATTACGGGGGACTAGACCATAGTTAACAGGTCC AAATAGGCCGGAATTATCGAGATTTCAAGGTCGATATTCTTGTGTATGGC CGTATCTCGTGTCCCTTTTTCGTTTTTCAGGAGAATTGCTTTGCTTGGGT ATTCATAGTCGGAATAGTTAGGTATTTATGGTCATGACATTTGGTCCTGA TTACTTGATTATAGTGTGATTACTTGATTATAGTGTACCTCCGTAATAGT AGGTAGCCACGGCTGCGCCGGCCGTGACGTGAAGAATTCTACTATTTTCA ACATGGCCTCGAAATCGGGTAGGAGTGTAGTGTACAAGAATCGGCCTAAA AAATCACAAATGAAACGCACACTTGTGGGAAGTTATTAGTGTATAAATCG GCCTAAAAAAATCGTATCTTATTAATTAATGCATGCAACAATGATCGATT GTGTGTATTGATTTTAAACAAGGATGCTGTCTGATGCCAAACAACTTAAT GTTTGTGTTGAGCAATATTTGTTTATAAAAGCGAAAACACAGCAGCGACA CGCACAGTAGCTCGACCGCGTTCGACCTCCGTGTCGCGTTCCGTCGGCAT ACCGTCCTGCCAACACACACTTCACACGGGCGTGTAGCCGTGGCTACCCA CTATTAATAGTATTTAGGAAAGCGCGGACACAGTAGCGGTATATTTTTTA ATTATTAGCTCTTTTGACCGTTTTTTTATAGCGATTTAGAGTTGATTTCT GTAGCACGAAATTAACTCTAAATTCATATGATTTGCGATGATGCCACACG ACTTGATGTTTGTGTGGAGCGCCAAATGTTGAAAAGAGAGGGATTTTTTA CCTCACGGGCTTAGCCTAGCCCTGGCTACGTACTATTAATAGGTAATTAA TAATGACTAGTTGCAAGCCACGGCTGTCGCCCGTGAGGTGTGCGTTTGGG ATACGGTGTTGCGACCCACGGCAGGCGTATCGCTATGCATTTGAAAAAAT TAAATCGTATCGGATTTAGTGTACCCAATCCGGCTTCAGTTTGAGAATAT AAATCGTATGGAATTTAGTATGGCCTCAGTATATTGTAGGATTTTTGTAT TAATATACGTGTTGTTTTTGCATTTACAGATACACCAAGAGCACCGGTAC TCCCACGGCTTGGTGTCGCTCATCAGATGCTGTCTCGTCGTCGACCCGGA GAGGAGACCAACAATCGGCCAGG
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Coding sequence (CDS) from alignment at S-dermatodea_contig10617:1534..7956+

>mRNA_S-dermatodea_contig10617.429.1 ID=mRNA_S-dermatodea_contig10617.429.1|Name=mRNA_S-dermatodea_contig10617.429.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1608bp|location=Sequence derived from alignment at S-dermatodea_contig10617:1534..7956+ (Saccorhiza dermatodea SderLu1190fm monoicous)
TGGCAGGCTGTTGACGAGGTTAACAAGAAGGACTACGCGCTGAAGATGGT
GCGGATCCCGCGAGGGCGTTCAGGGCAGCTGGCGAACGGAGAGGCAAGGT
GGCAGGCTGTTGACGAGGTTAACAAGAAGGACTACGCGCTGAAGATGGTG
CGGATCCCGCGAGGGCGTTCAGGGCAGCTGGCGAACGGAGAGGCAAGGGT
GGCGGAGATGGCCGTGGTGGAGCAGTCGGTTGTTCGATCGCTGCCGACGA
ATCACCCAAACATCGTCAGGTTCCACGACGCGGGGATCAGCAAGGCTGAC
AACGAGATACGCTACTTCATTCTGTCGGAGTACTGCCCCAGCAACGTGCT
CAAGAAAATGAGCGTAGCGGCGGTGGCGGAGATGGCCGTGGTGGAGCAGT
CGGTTGTTCGATCGCTGCCGACGAATCACCCAAACATCGTCAGGTTCCAC
GACGCGGGGATCAGCAAGGCTGACAACGAGATACGCTACTTCATTCTGTC
GGAGTACTGCCCCAGCAACGTGCTCAAGAAAATGAGCGTAGCGGCGGATC
AAGGAGGTCTATTGGCGGAAACGGAGGTGCTCCTGATCTTTCGAGATACG
CTCATGGCGGTGCTGTATCTGCACAGCCGAGTCCCACCGATAGCCCACAG
GCGAGAGCTGATCAAGGAGGTCTATTGGCGGAAACGGAGGTGCTCCTGAT
CTTTCGAGATACGCTCATGGCGGTGCTGTATCTGCACAGCCGAGTCCCAC
CGATAGCCCACAGGCGAGAGCTAGACTTGAAGGTCGATAATCTTCTGGTG
GGTCGAGATGGCCTCATCAAGCTCTGTGACTTCGGTAGCTGTAGCACGAC
GCACAGGGCCTTTTTCGGCGCTCAGAGACTTGAAGGTCGATAATCTTCTG
GTGGGTCGAGATGGCCTCATCAAGCTCTGTGACTTCGGTAGCTGTAGCAC
GACGCACAGGGCCTTTTTCGGCGCTCAGGACATCCAGGCGGCCAGTGAGG
ATATTCGGAGGAACACCACTCCGGAGTACCGATCGCCGGAGCAGGTGGAC
CTGTCCCGAGGGTATGTGGTGAGCGAGAAGGTTGATATCTGGGCGCTGGG
GGTGATCCTGTACAGGCTGGCGTTCTTCACGACTCCGTTCGAAGACAATA
AGGGGAACGTTGAGGCCTCGGCGATACTCAGGGGGTTGTCCGATCGCAAG
GACATCCAGGCGGCCAGTGAGGATATTCGGAGGAACACCACTCCGGAGTA
CCGATCGCCGGAGCAGGTGGACCTGTCCCGAGGGTATGTGGTGAGCGAGA
AGGTTGATATCTGGGCGCTGGGGGTGATCCTGTACAGGCTGGCGTTCTTC
ACGACTCCGTTCGAAGACAATAAGGGGAACGTTGAGGCCTCGGCGATACT
CAGGGGGTTGTCCGATCGCAAGATACACCAAGAGCACCGGTACTCCCACG
GCTTGGTGTCGCTCATCAGATGCTGTCTCGTCGTCGACCCGGAGAGGAGA
CCAACAATCGGCCAGATACACCAAGAGCACCGGTACTCCCACGGCTTGGT
GTCGCTCATCAGATGCTGTCTCGTCGTCGACCCGGAGAGGAGACCAACAA
TCGGCCAG
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