mRNA_S-dermatodea_contig10611.426.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10611.426.1 vs. uniprot
Match: D7FKH6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKH6_ECTSI) HSP 1 Score: 448 bits (1152), Expect = 3.910e-154 Identity = 239/317 (75.39%), Postives = 270/317 (85.17%), Query Frame = 1
Query: 1 GYLDRESMIRETQKAIRQYYKEGMYQDALEVTHRLVDQVDDHFGRAHGVYASALSDMALMMKSVGQNKEATDVYLKALEVYRTVYKGEENASFASTLHNLGMAFRAMAEESRKLEKIPLMERAAEAFERCVQIREKILTNNHPDLQLARSRLAMVQGLLGG-EKERTEARLRAALDGLQIAVGNNDASTANAMTNLALFLKGEGRYDEATELYTTALGARTELYGEKHFNVLVSMHNLSMVHHAAGREDAAVELQGKIARIGEELGMTEEEQKDGMEGVGLEDAIKLTREEGKR-PERKTGRKGQQGGRDSGTAWKP 945
GYL+RE MIRETQKA+R+YYKEGMYQDALEV RLVDQVDDHFGRAHGVY SALSDMALM+KS+G+++EAT+ YLKALEVYR VYKGEENASFASTLHNLGM FRAMAE+S+KLEKIPLMERAAE+FERCVQIREKILTNNHPDLQLARSRLA VQ +LGG EKE TEARLRAALDGLQ+AVGN+DASTANA TNLALFLKGEG+ EAT+LYT L R +LYG KHF+VLVSMHNLSM HH AGRED A++L+ +IA+IGEE+GMT EEQ + G A+KL +EEGK+ PE+K DSG+ WKP
Sbjct: 126 GYLEREGMIRETQKAVREYYKEGMYQDALEVAERLVDQVDDHFGRAHGVYGSALSDMALMLKSMGRHQEATETYLKALEVYRAVYKGEENASFASTLHNLGMLFRAMAEDSKKLEKIPLMERAAESFERCVQIREKILTNNHPDLQLARSRLATVQDMLGGGEKEGTEARLRAALDGLQMAVGNDDASTANAKTNLALFLKGEGKLAEATDLYTDVLETRKKLYGRKHFDVLVSMHNLSMTHHVAGREDEAIKLRDEIAKIGEEMGMTPEEQSEASGAAG--GAVKLAQEEGKKAPEKKKN--------DSGSTWKP 432
BLAST of mRNA_S-dermatodea_contig10611.426.1 vs. uniprot
Match: W4GGN5_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GGN5_9STRA) HSP 1 Score: 144 bits (363), Expect = 4.300e-37 Identity = 92/256 (35.94%), Postives = 136/256 (53.12%), Query Frame = 1
Query: 4 YLDRESMIRETQKAIRQYYKEGMYQDALEVTHRLVDQVDDHFGRAHGVYASALSDMALMMKSVGQNKEATDVYLKALEVYRTVYKGEENASFASTLHNLGMAFRAMAEESRKLEKIPLMERAAEAFERCVQIREKILTNNHPDLQLARSRLAMVQGLLGGEKERTEARLRAALDGLQIAVGNNDASTANAMTNLALFLKGEGRYDEATELYTTALGARTELYGEKHFNVLVSMHNLSMVHHAAGREDAAVELQGKI 771
Y+ ES I Q IR+ Y +G + LE+ D V DHFG H VYAS L+++ALM K++ EA Y AL VY++ GE +AS+A+TLHNLG +R A ++K+ ++ A E FE +++R IL +HPD+ ++ + M+ +K + E L A + L+ VG TA A NL + K G++D A EL+ A R G+ H + +MHN + A GRED A +Q +I
Sbjct: 46 YMIVESDIAGMQHKIRELYSKGDFVSGLEMAEICRDTVRDHFGEDHPVYASTLNNLALMQKNLSLLDEAIGSYEAALRVYKSCV-GENHASWATTLHNLGGVYRLQAHNLSGMKKVEGIDHALECFEESLRVRRDILAPDHPDIAISMCNVGMLYWHTH-KKAKAEEILVEAAERLESKVGPTSPLTALAWNNLGIVYKELGKFDAAVELFAKATAVRKASLGDMHVETITTMHNWAEALRAGGREDDAAVIQKEI 299
BLAST of mRNA_S-dermatodea_contig10611.426.1 vs. uniprot
Match: A0A397DE51_9STRA (EF-hand domain-containing protein (Fragment) n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DE51_9STRA) HSP 1 Score: 123 bits (309), Expect = 1.400e-27 Identity = 81/226 (35.84%), Postives = 119/226 (52.65%), Query Frame = 1
Query: 4 YLDRESMIRETQKAIRQYYKEGMYQDALEVTHRLVDQVDDHFGRAHGVYASALSDMALMMKSVGQNKEATDVYLKALEVYRTVYKGEENASFASTLHNLGMAFRAMAEESRKLEKIPLMERAAEAFERCVQIREKILTNNHPDLQLARSRLAMVQGLLGGEKERTEARLRAALDGLQIAVGNNDASTANAMTNLALFLKGEGRYDEATELYTTALGARTELYGEKH 681
Y+ ES I Q IR+ Y G + LE+ D V DHFG H VYAS L+++ALM K++ EA Y AL VY++ GE +AS+A+TLHNLG +R A ++K+ ++ A E FE +++R IL +HPD+ ++ + M+ +K + E L A + L+ VG TA A NL + K G++D A EL+ A R G+ H
Sbjct: 43 YMIVESDIAGMQHKIRELYSYGDFVSGLEMAEICRDTVRDHFGEDHPVYASTLNNLALMQKNLSLLDEAIGSYEAALRVYKSCV-GENHASWATTLHNLGGVYRLQAHNLSGMKKVEGIDHALECFEESLRVRRDILAPDHPDIAISMCNVGMLYWHTH-KKAKAEEILVEAAERLESKVGPTSPLTALAWNNLGIVYKELGKFDAAVELFAKATAVRKASLGDMH 266
BLAST of mRNA_S-dermatodea_contig10611.426.1 vs. uniprot
Match: A0A024UG34_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UG34_9STRA) HSP 1 Score: 111 bits (278), Expect = 7.890e-25 Identity = 79/256 (30.86%), Postives = 122/256 (47.66%), Query Frame = 1
Query: 4 YLDRESMIRETQKAIRQYYKEGMYQDALEVTHRLVDQVDDHFGRAHGVYASALSDMALMMKSVGQNKEATDVYLKALEVYRTVYKGEENASFASTLHNLGMAFRAMAEESRKLEKIPLMERAAEAFERCVQIREKILTNNHPDLQLARSRLAMVQGLLGGEKERTEARLRAALDGLQIAVGNNDASTANAMTNLALFLKGEGRYDEATELYTTALGARTELYGEKHFNVLVSMHNLSMVHHAAGREDAAVELQGKI 771
Y+ E+ I QK IR+ Y +G + LE+ D V DHFG H VYAS L+++ALM K++ Q EA + Y AL VY++ GE +AS+A+TLHNLG +R A ++K+ ++ A E FE +++R +IL +HPD+ ++ + M+ +KE+ E L A++ L+ VG +MHN + A+GR+D A E+Q I
Sbjct: 45 YMVVEADIAGMQKKIRELYSKGDFVSGLEMAEICRDAVRDHFGDDHPVYASTLNNLALMQKNLSQLDEAIESYEAALRVYKSCV-GENHASWATTLHNLGGVYRLQAHSLSGMKKVEGLDHALECFEESLRVRREILAADHPDIAMSMCNVGMLYWHTH-KKEKAEEMLVEAVERLEAKVGATSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTMHNWAEALRASGRDDDAAEIQKTI 298
BLAST of mRNA_S-dermatodea_contig10611.426.1 vs. uniprot
Match: A0A485LCH3_9STRA (Aste57867_19411 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LCH3_9STRA) HSP 1 Score: 110 bits (274), Expect = 3.250e-24 Identity = 78/255 (30.59%), Postives = 122/255 (47.84%), Query Frame = 1
Query: 16 ESMIRETQKAIRQYYKEGMYQDALEVTHRLVDQVDDHFGRAHGVYASALSDMALMMKSVGQNKEATDVYLKALEVYRTVYKGEENASFASTLHNLGMAFRAMAEESRKLEKIPLMERAAEAFERCVQIREKILTNNHPDLQLARSRLAMVQGLLGGEKERTEARLRAALDGLQIAVGNNDASTANAMTNLALFLKGEGRYDEATELYTTALGARTELYGEKHFNVLVSMHNLSMVHHAAGREDAAVELQGKIARI 780
ES I Q+ IR++Y +G + LE+ D V HFG H VYAS L++MALM K++ +E+ Y AL VY+ GE +AS+A+TLHNLG R + ++KI ++ A E FE +++R IL +HPD+ ++ + ++ +K + E L A++ L+ VG + TA A + +MHNL+ AAGR+D A ++Q I +
Sbjct: 56 ESEIAGMQQKIREFYSKGDFVSGLEIAEICRDTVKVHFGEEHPVYASTLNNMALMQKNLSLLEESIATYEHALRVYKACV-GENHASWATTLHNLGGVHRLHSHALTGMKKIESLDLALECFEESLRVRRDILAADHPDIAISMCNVGILYWHTH-KKAKAEDMLVDAVERLEAKVGPSSPLTALAYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVETITTMHNLAETLRAAGRDDEATKIQEAILEL 308
BLAST of mRNA_S-dermatodea_contig10611.426.1 vs. uniprot
Match: A0A1V9Z3R8_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z3R8_9STRA) HSP 1 Score: 106 bits (265), Expect = 5.210e-22 Identity = 61/181 (33.70%), Postives = 111/181 (61.33%), Query Frame = 1
Query: 4 YLDRESMIRETQKAIRQYYKEGMYQDALEVTHRLVDQVDDHFGRAHGVYASALSDMALMMKSVGQNKEATDVYLKALEVYRTVYKGEENASFASTLHNLGMAFRAMAEESRKLEKIPLMERAAEAFERCVQIREKILTNNHPDLQLARSRLAMVQGLLGGEKERTEARLRAALDGLQIAVG 546
+++ E+ I Q+ IR++Y +G ++ AL++ D V +HFG H VYAS L+++ALM K++ + EA + Y +AL VY+ GE +ASFA+T+HNLG +R + ++K+ M+ A E F+ ++IR++ L +HPD+ ++ + + M+ +K++ E + A++ LQ +G
Sbjct: 271 FVEVENDIAGMQQKIREFYTQGDFESALDIAEICRDNVKEHFGTEHPVYASTLNNIALMQKNLSKLTEAIETYEEALRVYKECV-GENHASFATTMHNLGGVYRLQSHSLSGMKKVEAMDYALEYFQESLRIRQENLAPDHPDVAVSMTNVGMLHWHTH-KKDKGEDMVVEAMERLQKKLG 449
BLAST of mRNA_S-dermatodea_contig10611.426.1 vs. uniprot
Match: A0A2D4CBT8_PYTIN (rRNA adenine N(6)-methyltransferase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBT8_PYTIN) HSP 1 Score: 93.6 bits (231), Expect = 1.790e-17 Identity = 62/189 (32.80%), Postives = 98/189 (51.85%), Query Frame = 1
Query: 1 GYLDRESMIRETQKAIRQYYKEGMYQDALEVTHRLVDQVDDHFGRAHGVYASALSDMALMMKSVGQNKEATDVYLKALEVYRTVYKGEENASFASTLHNLGMAFRAMAEESRKLEKIPLMERAAEAFERCVQIREKILTNNHPDLQLARSRLAMVQGLLGGEKERTEARLRAALDGLQIAVGNNDASTA 567
Y+ E I Q+ IR Y +G +QDALEV + D V HFG +H VYAS ++++ALM K++GQ +EA + Y AL VY+ +A+A + +E++ + RA + FE ++IR+ +L HPD+ L+ L ++ + E+ A L+ AL L+ VG + TA
Sbjct: 64 NYVQVEQDIAAMQREIRDAYSKGSFQDALEVGLQCRDLVKSHFGESHPVYASTITNIALMYKNMGQVEEAIESYEFALRVYKXXXXXXXXXXXXXXXXXXXXX-QALAHGVKGMERVQALHRAQDCFEESLKIRKLLLEPGHPDIALSMCNLGIIHWH-NKQAEKAVATLKDALQALEARVGKDSTLTA 250
BLAST of mRNA_S-dermatodea_contig10611.426.1 vs. uniprot
Match: A0A0P1AF21_PLAHL (Kinesin light chain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AF21_PLAHL) HSP 1 Score: 89.7 bits (221), Expect = 8.670e-17 Identity = 64/196 (32.65%), Postives = 95/196 (48.47%), Query Frame = 1
Query: 1 GYLDRESMIRETQKAIRQYYKEGMYQDALEVTHRLVDQVDDHFGRAHGVYASALSDMALMMKSVGQNKEATDVYLKALEVYRTVYKGEENASFASTLHNLGMAFRAMAEESRKLEKIPLMERAAEAFERCVQIREKILTNNHPDLQLARSRLAMVQGLLGGEKERTEARLRAALDGLQIAVGNNDASTANAMTNLA 588
Y+ E I Q+ IR Y G YQ ALEV + D V HFG H VYAS ++++ALM K++GQ +EA + Y AL+ Y+ + +E++ + RA E FE ++IR +IL H D+ L+ S + ++ + ++ A L A+D L+ VG N TA A NLA
Sbjct: 57 SYVQVEQNIASMQREIRDAYNSGDYQAALEVGFQCRDLVKSHFGENHPVYASTITNIALMYKNLGQTEEAIESYEFALQTYKXXXXXXXXXXXXXXXXXXXXXXXXSI-STAGMERVTALHRALECFEESLKIRREILEPGHADIALSMSNIGVIYWQ-NKQPDKAFAALIEAVDLLEKKVGANSVLTALAKNNLA 250
BLAST of mRNA_S-dermatodea_contig10611.426.1 vs. uniprot
Match: A0A3L6VBZ1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VBZ1_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 9.510e-16 Identity = 52/127 (40.94%), Postives = 72/127 (56.69%), Query Frame = 1
Query: 4 YLDRESMIRETQKAIRQYYKEGMYQDALEVTHRLVDQVDDHFGRAHGVYASALSDMALMMKSVGQNKEATDVYLKALEVYRTVYKGEENASFASTLHNLGMAFRAMAEESRKLEKIPLMERAAEAFE 384
Y+ ES I Q IR+ Y G + LE+ D V DHFG H VYAS L+++ALM K++ EA Y AL VY++ GE +AS+A+TLHNLG +R A ++K+ ++ A E FE
Sbjct: 46 YMIVESDIAGMQHKIRELYSYGDFVSGLEMAEICRDTVRDHFGEDHPVYASTLNNLALMQKNLSLLDEAIGSYEAALRVYKSCV-GENHASWATTLHNLGGVYRLQAHNLSGMKKVEGIDHALECFE 171
BLAST of mRNA_S-dermatodea_contig10611.426.1 vs. uniprot
Match: A0A3R6YC42_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6YC42_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 1.420e-15 Identity = 70/244 (28.69%), Postives = 104/244 (42.62%), Query Frame = 1
Query: 40 KAIRQYYKEGMYQDALEVTHRLVDQVDDHFGRAHGVYASALSDMALMMKSVGQNKEATDVYLKALEVYRTVYKGEENASFASTLHNLGMAFRAMAEESRKLEKIPLMERAAEAFERCVQIREKILTNNHPDLQLARSRLAMVQGLLGGEKERTEARLRAALDGLQIAVGNNDASTANAMTNLALFLKGEGRYDEATELYTTALGARTELYGEKHFNVLVSMHNLSMVHHAAGREDAAVELQGKI 771
K IR+ Y +G + LE+ D V DHFG H VYAS L+++ALM K++ Q EA + Y AL VY++ GE +AS+A+TLHNLG +R A + +KIL +HPD+ ++ + M+ +KE+ E L A++ L+ VG +MHN + A+GR+D A E+Q I
Sbjct: 149 KKIRELYSKGDFVSGLEMAEICRDAVRDHFGDDHPVYASTLNNLALMQKNLSQLDEAIESYEAALRVYKSCV-GENHASWATTLHNLGGVYRLQAHSLSGM--------------------KKILAADHPDIAMSMCNVGMLYWHTH-KKEKAEEMLVEAVERLEAKVGATSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTMHNWAEALRASGRDDDAAEIQKTI 370 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10611.426.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10611.426.1 >prot_S-dermatodea_contig10611.426.1 ID=prot_S-dermatodea_contig10611.426.1|Name=mRNA_S-dermatodea_contig10611.426.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=314bp MIRETQKAIRQYYKEGMYQDALEVTHRLVDQVDDHFGRAHGVYASALSDMback to top mRNA from alignment at S-dermatodea_contig10611:5094..7991- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10611.426.1 ID=mRNA_S-dermatodea_contig10611.426.1|Name=mRNA_S-dermatodea_contig10611.426.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2898bp|location=Sequence derived from alignment at S-dermatodea_contig10611:5094..7991- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10611:5094..7991- >mRNA_S-dermatodea_contig10611.426.1 ID=mRNA_S-dermatodea_contig10611.426.1|Name=mRNA_S-dermatodea_contig10611.426.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1884bp|location=Sequence derived from alignment at S-dermatodea_contig10611:5094..7991- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |