mRNA_S-dermatodea_contig10578.402.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig10578.402.1
Unique NamemRNA_S-dermatodea_contig10578.402.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig10578.402.1 vs. uniprot
Match: D8LF43_ECTSI (RPA_interact_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF43_ECTSI)

HSP 1 Score: 249 bits (635), Expect = 3.940e-79
Identity = 122/171 (71.35%), Postives = 140/171 (81.87%), Query Frame = 1
Query:   25 MDGDDV-WEENGAFRD---EEHMLSPEEYLEMMQYIEEACRQEDLNAEAEAIEEYELNRRLEEEAVESAVASGLDFDDNGQDNSVLCPVCKRNYLLQAGAPSASIVCVCGFRLDTGGDRLGLEHLRQQLAETYEQHRTGCSAEPSFSVEGSPGLDVLWSSCDGCGFARVVL 525
            +D D++ W + G   D   EEH+LSP+EYLEMMQYIEEAC++ED  AEA  +E+YEL RRLEEE VE AVAS  D + NGQD++VLCPVCKR+YLL  G PSASIVC CGFRLDTGGDRLGLEH +QQLA+TY +H T CSAEPSF VEG+PG DVLWSSCDGCGFARVVL
Sbjct:    2 VDEDELGWGDGGGAEDDCDEEHLLSPDEYLEMMQYIEEACKEEDFRAEAAVLEDYELTRRLEEEEVEYAVASLDDINGNGQDDAVLCPVCKRDYLLHPGPPSASIVCACGFRLDTGGDRLGLEHFKQQLADTYSEHSTACSAEPSFVVEGAPGFDVLWSSCDGCGFARVVL 172          
BLAST of mRNA_S-dermatodea_contig10578.402.1 vs. uniprot
Match: A0A835YX80_9STRA (Replication protein A interacting C-terminal-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX80_9STRA)

HSP 1 Score: 103 bits (256), Expect = 6.490e-23
Identity = 60/155 (38.71%), Postives = 81/155 (52.26%), Query Frame = 1
Query:   82 LSPEEYLEMMQYIEEACRQEDLNAEAEAIEEYELNRRLEEE-------AVESAVASGLDFDDNGQDNSVLCPVCKRNYLLQAGAPSASIVCVCGFRLDTGGDRLGLEHLRQQLAETYEQHRTGCSAEPSFSVEGSPGLDVLWSSCDGCGFARVVL 525
            L+PEEY +MM +IE+A   E   A+A                      A  +  A+  +     +D+ VLCPVCK  +LLQ GA   +I+C CGFRL T G+ + L  LRQ LAE +  HR  C  +P+F V    G  +LWS C  CGF ++VL
Sbjct:    5 LTPEEYTDMMLFIEQALAAELARADASXXXXXXXXXXXXXXXXXXXXXAALARAAAEAEDGRGWRDDEVLCPVCKGGWLLQHGA---TIMCTCGFRLQTDGEGMQLGVLRQALAEVFTDHRERCHLQPTFRVREEFGAAMLWSECSACGFEQIVL 156          
BLAST of mRNA_S-dermatodea_contig10578.402.1 vs. uniprot
Match: A0A833R3L3_9POAL (RPA-interacting protein A n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833R3L3_9POAL)

HSP 1 Score: 82.8 bits (203), Expect = 1.190e-14
Identity = 64/175 (36.57%), Postives = 88/175 (50.29%), Query Frame = 1
Query:    4 ALPQPEAMDGDDVWEENGAFRDEEHMLSPEEYLEMMQYIEEACRQEDLNAEAEAIEEYELNRRLEEEAVESAVASGLDFDDNGQDNSVLCPVCKRNYLLQAGAPSASIVCVC-GFRLDTGGDRLGLEHLRQQLAETYEQHRT-GCSAEPSFSVEGSPGLDVLWSSCDGCGFARVV 522
            ALP  E  + D +WE    F +     S E  LEM + + +  R+E +  E E +EE  ++  LEE+A E    +    ++ G +N V CPVCK+  L +A      I C C   RLD G D++ LE LR QLAE +  H   GC + P F VE + GL  L   C+ C    VV
Sbjct:   74 ALPLNE-KENDQIWEHEDQFGNVTE--SEEALLEMERLLYQELREELIRRELEFLEE--VDAYLEEQAFEHMQLN----ENQGVENKVWCPVCKKGELKEA---HNLIYCTCCNMRLDIGDDKVNLEFLRDQLAEVHMVHLDRGCKSTPKFCVETNFGLTALCIKCEVCCTFEVV 236          
BLAST of mRNA_S-dermatodea_contig10578.402.1 vs. uniprot
Match: A0A1S3K953_LINUN (RPA-interacting protein A isoform X2 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3K953_LINUN)

HSP 1 Score: 76.3 bits (186), Expect = 1.920e-12
Identity = 42/128 (32.81%), Postives = 64/128 (50.00%), Query Frame = 1
Query:  166 IEEYELNRRLEEEAVESAVASGLDFDDNG--------QDNSVLCPVCKRNYLLQAGAPSASIVCVCGFRLDTGGDRLGLEHLRQQLAETYEQHRTGCSAEPSFSVEGSPGLDVLWSSCDGCGFARVVL 525
            +EE +    LEE+ +       L FD+ G        + + V+CP+CK+N L+Q       I C CG R+DT  D L + +++ QL E    H T C  E  FSV    G++ L  +C+ C F  +V+
Sbjct:   99 LEEIKSELLLEEQRILEEYEKSLAFDEAGLCAAIDQLKTDEVICPICKKNPLMQN---KQIIFCCCGMRIDTELDGLNIANIKSQLEEGISLHNTQCVKEAKFSVMKQAGVENLLMTCETCDFMFIVI 223          
BLAST of mRNA_S-dermatodea_contig10578.402.1 vs. uniprot
Match: D8R075_SELML (Uncharacterized protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R075_SELML)

HSP 1 Score: 76.3 bits (186), Expect = 2.240e-12
Identity = 59/175 (33.71%), Postives = 90/175 (51.43%), Query Frame = 1
Query:   28 DGDDVWEENGAFRDEEHMLSPEEYLEMMQYIEEACRQ----EDLNAEAEAIEEYELNRRLEEEAVESAVASGLDFDDNGQDNSVLCPVCKRNYLLQAGAPSASIVCVCGFRLDTGGDR----LGLEHLRQQLAETYEQH-RTGCSAEPSFSVEGSPGLDVLWSSCDGCGFARVVL 525
            DGD +W  + A       LSP+EY ++M  ++    Q    E      + +E+YE    LE+    S++AS L  + N Q+N VLCP+C+R +LL       SI C     LD G  R    +G+E +R +LAE  +QH  +GCS++P F+ +       L+  C+ C F  VV+
Sbjct:   69 DGDMLWNYSSAGSKSPSELSPQEYEDLMLAMQAVLYQGTYPEQQQHAIDDLEDYEKATALED----SSLASLL--EQNHQENGVLCPLCRRGFLLDK---ENSIRCSSNGCLDLGSQRDKLKVGVEFVRIRLAELMDQHYSSGCSSQPVFTFKDE--FQSLFILCNSCDFFEVVV 232          
BLAST of mRNA_S-dermatodea_contig10578.402.1 vs. uniprot
Match: A0A1S3K944_LINUN (RPA-interacting protein B isoform X1 n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3K944_LINUN)

HSP 1 Score: 76.3 bits (186), Expect = 2.840e-12
Identity = 42/128 (32.81%), Postives = 64/128 (50.00%), Query Frame = 1
Query:  166 IEEYELNRRLEEEAVESAVASGLDFDDNG--------QDNSVLCPVCKRNYLLQAGAPSASIVCVCGFRLDTGGDRLGLEHLRQQLAETYEQHRTGCSAEPSFSVEGSPGLDVLWSSCDGCGFARVVL 525
            +EE +    LEE+ +       L FD+ G        + + V+CP+CK+N L+Q       I C CG R+DT  D L + +++ QL E    H T C  E  FSV    G++ L  +C+ C F  +V+
Sbjct:  123 LEEIKSELLLEEQRILEEYEKSLAFDEAGLCAAIDQLKTDEVICPICKKNPLMQN---KQIIFCCCGMRIDTELDGLNIANIKSQLEEGISLHNTQCVKEAKFSVMKQAGVENLLMTCETCDFMFIVI 247          
BLAST of mRNA_S-dermatodea_contig10578.402.1 vs. uniprot
Match: UPI000BA8254F (RPA-interacting protein B-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA8254F)

HSP 1 Score: 74.7 bits (182), Expect = 7.400e-12
Identity = 36/91 (39.56%), Postives = 50/91 (54.95%), Query Frame = 1
Query:  253 QDNSVLCPVCKRNYLLQAGAPSASIVCVCGFRLDTGGDRLGLEHLRQQLAETYEQHRTGCSAEPSFSVEGSPGLDVLWSSCDGCGFARVVL 525
            Q + V+CPVC+R+ L QAG+    I C CG ++DT  D   L +  QQL +   QH   C+  P FSV    G+  L  +C  CGF  +V+
Sbjct:  142 QRDEVICPVCQRSPLAQAGSV---IFCPCGIQIDTEQDSFTLHNFHQQLDKGITQHTNNCNVSPIFSVRSEYGITNLLITCTACGFMFIVV 229          
BLAST of mRNA_S-dermatodea_contig10578.402.1 vs. uniprot
Match: UPI000D1C7D68 (uncharacterized protein LOC9653983 n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C7D68)

HSP 1 Score: 75.5 bits (184), Expect = 1.070e-11
Identity = 58/173 (33.53%), Postives = 90/173 (52.02%), Query Frame = 1
Query:   28 DGDDVWEENGAFRDEEHMLSPEEYLEMMQYIEEACRQEDL--NAEAEAIEEYELNRRLEEEAVESAVASGLDFDDNGQDNSVLCPVCKRNYLLQAGAPSASIVCVCGFRLDTGGDR----LGLEHLRQQLAETYEQH-RTGCSAEPSFSVEGSPGLDVLWSSCDGCGFARVVL 525
            DGD +W  + A       LSP+EY ++M  ++    Q       + + +E+YE    LE+    S++AS L  + N Q+N VLCP+C+R +LL       SI C     LD G  R    +G+E +R +LAE  +QH  +GCS++P F+ +       L+  C+ C F  VV+
Sbjct:  142 DGDMLWNYSSAGSKSPSELSPQEYEDLMLAMQAVLYQGTYPEQQQHDDLEDYEKATALED----SSLASLL--EQNHQENGVLCPLCRRGFLLDK---ENSIRCSSNGCLDLGSQRDKLKVGVEFVRIRLAELMDQHYSSGCSSQPVFTFKDE--FQSLFILCNSCDFFEVVV 303          
BLAST of mRNA_S-dermatodea_contig10578.402.1 vs. uniprot
Match: A0A3M6V0A9_POCDA (Uncharacterized protein n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6V0A9_POCDA)

HSP 1 Score: 72.4 bits (176), Expect = 5.960e-11
Identity = 51/150 (34.00%), Postives = 75/150 (50.00%), Query Frame = 1
Query:   85 SPEEYLEMMQYIEEACRQEDLNAEAEAIEEYELNRRLEEEAVESAVASGLDFDDNGQDNSVLCPVCKRNYLLQAGAPSASIVCVCGFRLDTGGDRLGLEHLRQQLAETYEQH-RTGCSAEPSF--SVEGSPGLDVLWSSCDGCGFARVVL 525
            S +E L ++  I++    E+ N     + +YE N + EE ++ +A+ S       G ++SV+CPVCKRN L Q       + C CG R+DT  D L L +LR Q+      H   GC+ EP F  SV     +  L + C  C F  +VL
Sbjct:  108 SLDEVLSLLDEIQKELMDEERNI----LAQYEENLKFEESSLCAAIES------LGTEDSVICPVCKRNPLHQN---KQVVFCACGIRIDTEHDALNLTYLRNQIDGALTIHGEQGCTMEPEFCVSVLQEVAVSNLVALCKACDFLFIVL 244          
BLAST of mRNA_S-dermatodea_contig10578.402.1 vs. uniprot
Match: A0A7S0VBY7_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VBY7_9CRYP)

HSP 1 Score: 70.1 bits (170), Expect = 1.110e-10
Identity = 52/155 (33.55%), Postives = 77/155 (49.68%), Query Frame = 1
Query:   70 EEHMLSPEEYLEMMQYIEEACRQEDLNAEAEAI-EEYELNRRLEEEAVESAVASGLDFDDNGQDNSVLCPVCKRNYLLQAGAPSASIVCVCGFRLDTGGDRLGLEHLRQQLAETYEQHRT-GCSAEPSFSVEGSPG-LDVLWSSCDGCGFARVVL 525
            EE  LS EEY+ +MQY+EEA   E    E E I +E     R E  A+ ++ A G         + V CPVC R+ L    +    + C CG RL    +++ L  L   L + +  H + GC+ +P  S++  PG +D+L  +C  C F  VV+
Sbjct:   31 EEDGLSEEEYIGLMQYLEEAVVTELRKQEQEIIAQELFDQERAESNALAASHAEG---------HRVTCPVCMRDTL---HSHRNVVFCGCGMRLSCQTEQVSLVQLESMLLDRFAAHTSSGCANQPVCSIQTVPGGVDMLMMACAACDFMDVVV 173          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10578.402.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D8LF43_ECTSI3.940e-7971.35RPA_interact_C domain-containing protein n=1 Tax=E... [more]
A0A835YX80_9STRA6.490e-2338.71Replication protein A interacting C-terminal-domai... [more]
A0A833R3L3_9POAL1.190e-1436.57RPA-interacting protein A n=1 Tax=Carex littledale... [more]
A0A1S3K953_LINUN1.920e-1232.81RPA-interacting protein A isoform X2 n=1 Tax=Lingu... [more]
D8R075_SELML2.240e-1233.71Uncharacterized protein n=3 Tax=Selaginella moelle... [more]
A0A1S3K944_LINUN2.840e-1232.81RPA-interacting protein B isoform X1 n=2 Tax=Lingu... [more]
UPI000BA8254F7.400e-1239.56RPA-interacting protein B-like n=1 Tax=Limulus pol... [more]
UPI000D1C7D681.070e-1133.53uncharacterized protein LOC9653983 n=1 Tax=Selagin... [more]
A0A3M6V0A9_POCDA5.960e-1134.00Uncharacterized protein n=1 Tax=Pocillopora damico... [more]
A0A7S0VBY7_9CRYP1.110e-1033.55Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10578contigS-dermatodea_contig10578:589..2822 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score79.3
Seed ortholog evalue1.9e-12
Seed eggNOG ortholog7668.SPU_020179-tr
Preferred nameRPAIN
GOsGO:0001650,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006606,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006974,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0015031,GO:0015833,GO:0016604,GO:0016605,GO:0017038,GO:0031974,GO:0031981,GO:0033036,GO:0033365,GO:0033554,GO:0034504,GO:0034613,GO:0034641,GO:0034645,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044452,GO:0044464,GO:0044877,GO:0045184,GO:0046483,GO:0046907,GO:0050896,GO:0051169,GO:0051170,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051716,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0072594,GO:0090304,GO:1901360,GO:1901576
EggNOG free text desc.protein import into nucleus
EggNOG OGs2C8FC@1,2R0QT@2759,39SXM@33154,3BKGT@33208,3CTDP@33213
COG Functional cat.S
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRPA-interacting protein
Ec32 orthologEc-06_001600.1
Exons4
Model size1091
Cds size504
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10578.402.1prot_S-dermatodea_contig10578.402.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig10578 1152..2798 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924163.9407713-UTR-S-dermatodea_contig10578:588..11511622924163.9407713-UTR-S-dermatodea_contig10578:588..1151Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10578 589..1151 -
1694079061.3916216-UTR-S-dermatodea_contig10578:588..11511694079061.3916216-UTR-S-dermatodea_contig10578:588..1151Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10578 589..1151 -
1622924163.997519-UTR-S-dermatodea_contig10578:2798..28221622924163.997519-UTR-S-dermatodea_contig10578:2798..2822Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10578 2799..2822 -
1694079061.466924-UTR-S-dermatodea_contig10578:2798..28221694079061.466924-UTR-S-dermatodea_contig10578:2798..2822Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10578 2799..2822 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924163.9537506-CDS-S-dermatodea_contig10578:1151..12571622924163.9537506-CDS-S-dermatodea_contig10578:1151..1257Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10578 1152..1257 -
1694079061.4173467-CDS-S-dermatodea_contig10578:1151..12571694079061.4173467-CDS-S-dermatodea_contig10578:1151..1257Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10578 1152..1257 -
1622924163.9648507-CDS-S-dermatodea_contig10578:1528..16951622924163.9648507-CDS-S-dermatodea_contig10578:1528..1695Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10578 1529..1695 -
1694079061.4291759-CDS-S-dermatodea_contig10578:1528..16951694079061.4291759-CDS-S-dermatodea_contig10578:1528..1695Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10578 1529..1695 -
1622924163.974146-CDS-S-dermatodea_contig10578:2030..21231622924163.974146-CDS-S-dermatodea_contig10578:2030..2123Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10578 2031..2123 -
1694079061.4393344-CDS-S-dermatodea_contig10578:2030..21231694079061.4393344-CDS-S-dermatodea_contig10578:2030..2123Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10578 2031..2123 -
1622924163.9825916-CDS-S-dermatodea_contig10578:2660..27981622924163.9825916-CDS-S-dermatodea_contig10578:2660..2798Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10578 2661..2798 -
1694079061.4512143-CDS-S-dermatodea_contig10578:2660..27981694079061.4512143-CDS-S-dermatodea_contig10578:2660..2798Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10578 2661..2798 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig10578.402.1

>prot_S-dermatodea_contig10578.402.1 ID=prot_S-dermatodea_contig10578.402.1|Name=mRNA_S-dermatodea_contig10578.402.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=168bp
MDGDDVWEENGAFRDEEHMLSPEEYLEMMQYIEEACRQEDLNAEAEAIEE
YELNRRLEEEAVESAVASGLDFDDNGQDNSVLCPVCKRNYLLQAGAPSAS
IVCVCGFRLDTGGDRLGLEHLRQQLAETYEQHRTGCSAEPSFSVEGSPGL
DVLWSSCDGCGFARVVL*
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mRNA from alignment at S-dermatodea_contig10578:589..2822-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig10578.402.1 ID=mRNA_S-dermatodea_contig10578.402.1|Name=mRNA_S-dermatodea_contig10578.402.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2234bp|location=Sequence derived from alignment at S-dermatodea_contig10578:589..2822- (Saccorhiza dermatodea SderLu1190fm monoicous)
GGGGCGCTTCCTCAGCCGGAGGCGATGGACGGCGATGATGTGTGGGAGGA GAACGGCGCGTTTCGAGACGAGGAGCACATGCTCTCGCCCGAGGAGTACC TTGAGATGATGCAGTACATAGAGGAGGCGTGCAGGCAGGAAGACCTTAAC GCGGAGGCGGAGGTATGTGGGTTTTTGCGTGTTTGGGTCGGGGATATCGG TTGCAGGGGTCAAGCAGGTGTGCTTCTACGCGGCAGTTTGGGCGAGGGTT GATGGTCGCTGCGCGTGCTGTGCGTGTTTGGCTATACGTTCGATTTTTGC TTGCTGTGTTGCCATTTATGCAGGCGTGGCGGATTTGTCGATGTTGTATC CCTCGCGAAGCAACGCTGACGTTCGGTGGTGACCGCTACCGAGTACATAA GTACCAGTAGAGCCACCGTTCCGCTGTGATGAAACTGTACAATACAAGTA CATGACAAGGCTTGGTTACAACGGCTACAGTACCGAAACCGGCTAACCGC GCCCTAAGTTGCACGTGCTCAACATCATCGATTCGCTGCCGACAAACAAA CGACCGTTCCTCTACCACTCCACACGGATACCCCTCACCATGCCATCCTC CAGTCTCTATTCTCCATTCCGATGTGTTTTGTGACGTCTGAGACCCTGAC GTATGTATGGACCGCGGTCGTAATTCGGTCGTTTTTGTTCCTGGAGCAGG CCATCGAGGAGTACGAGCTAAATAGGCGTTTAGAGGAGGAAGCAGTCGAA TCCGCGGTCGCATCTGGTCTTGACTTTGACGACAACGGACAGGTAAGACT CACGCTCTGAGATCGGGCAAGGCGAGAGCAGGAAGACAAACCGTTCACAC TCTCTGCGCTTTTTTCACACGAGGTGCGAAATGCGGTTGTTTTATGTGTG TTCGATGGTGAAACTTAGCGGTGATCATCAAACCGTGTGCGTCCAGCGCG GCGTTCTTTTGTTATCTCTTACGTTCTGAATCAGGAGGGTGTGTACCGTG TACCATCTTGACGGTCGCCGGCGGTATAACATGGACCAGTATACCATCTT GCAACTACACCCCGGTACATACGACGATGGAACATCTGCCAACAGCAGTC TAAATCAAGCTCTTCGTGTCCGTGCAGGATAACTCGGTCCTGTGCCCCGT CTGCAAGCGGAACTATTTGCTACAGGCGGGGGCGCCGTCGGCATCCATTG TTTGCGTTTGCGGCTTCCGCCTGGACACCGGCGGTGACCGTCTAGGCCTT GAGCATCTCAGACAGCAGCTGGCGGAGACCTACGAGCAACACAGGCGAGG CACTCGTTTGTCTTGGTGGTTGCCCCCGATGCGCAACATCGCCTCTGTCT CGTAGCGCAGTGGCTGGCGTGGCCTTGCGTGTTGTTTTTTGTCAGGAGTG GGGCTCCGACACAACGTACATGATACTGAGCGCGGAAGGCCTCTAGGGGA CTAAATCGTCGTTGCCGCTTCAATCGGCGATCACCCGTTGCAATACTGAG TCAACGTTTTTATAATACCGCCGAACCTCTCGTCCGCTTTTGAACTTGAT GCATGATCATCGCAGAACTGGTTGCAGCGCGGAACCCAGCTTTTCGGTGG AGGGCTCGCCGGGTCTGGACGTACTCTGGAGCTCATGCGACGGATGCGGC TTCGCCAGGGTAGTCCTCTGAATGCCGCGATAAAACATCCTCAGCACGCC GCTGTGCGTTTTGTAGTGAAGGATGGGCAAACATTGCACAGTAGAGTACA CGCGGAACGCTGCATCTAGATGGTACGGGCATGTGTACATACGAAGTACG ACGTTGACACGACTGGTGGACCTTCTGCGTTGATGGAGGCGAGCCACGTG TGGGTCCTCCCCTGGGAAGGTGTGGATCAACAACGATGGAAGTAATGATG ATGCTGGCAACCGCATAATCGTTATTAGTTTCTTCTTTACGGGTGTTTTG TTTCGGGGATTCGTTCCAGCTGGGCCGACGGCGAGAATCATCCGTGTCTC GTTCGAAGTCTCCCAAGAACCAAACATACCGCCATCGGGCGTGTCTTCTG TGCGACAAACTTTCCGGCTTCATCGTTTCAGAGCAACATGGCGAGAAAAA TGAATATCTGGTCACATCCACGGCCTCTCGTTTTGTGCTATTTTACCAGG CTGGCCTGTGTATTGGCTACAGATAGATGACGACAGCAGCGGTTAACAAT TATCCGCATATCTGCATGAAATTGTTCGAAGGAG
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Coding sequence (CDS) from alignment at S-dermatodea_contig10578:589..2822-

>mRNA_S-dermatodea_contig10578.402.1 ID=mRNA_S-dermatodea_contig10578.402.1|Name=mRNA_S-dermatodea_contig10578.402.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1008bp|location=Sequence derived from alignment at S-dermatodea_contig10578:589..2822- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGACGGCGATGATGTGTGGGAGGAGAACGGCGCGTTTCGAGACGAGGA
GCACATGCTCTCGCCCGAGGAGTACCTTGAGATGATGCAGTACATAGAGG
AGGCGTGCAGGCAGGAAGACCTTAACGCGGAGGCGGAGATGGACGGCGAT
GATGTGTGGGAGGAGAACGGCGCGTTTCGAGACGAGGAGCACATGCTCTC
GCCCGAGGAGTACCTTGAGATGATGCAGTACATAGAGGAGGCGTGCAGGC
AGGAAGACCTTAACGCGGAGGCGGAGGCCATCGAGGAGTACGAGCTAAAT
AGGCGTTTAGAGGAGGAAGCAGTCGAATCCGCGGTCGCATCTGGTCTTGA
CTTTGACGACAACGGACAGGCCATCGAGGAGTACGAGCTAAATAGGCGTT
TAGAGGAGGAAGCAGTCGAATCCGCGGTCGCATCTGGTCTTGACTTTGAC
GACAACGGACAGGATAACTCGGTCCTGTGCCCCGTCTGCAAGCGGAACTA
TTTGCTACAGGCGGGGGCGCCGTCGGCATCCATTGTTTGCGTTTGCGGCT
TCCGCCTGGACACCGGCGGTGACCGTCTAGGCCTTGAGCATCTCAGACAG
CAGCTGGCGGAGACCTACGAGCAACACAGGATAACTCGGTCCTGTGCCCC
GTCTGCAAGCGGAACTATTTGCTACAGGCGGGGGCGCCGTCGGCATCCAT
TGTTTGCGTTTGCGGCTTCCGCCTGGACACCGGCGGTGACCGTCTAGGCC
TTGAGCATCTCAGACAGCAGCTGGCGGAGACCTACGAGCAACACAGAACT
GGTTGCAGCGCGGAACCCAGCTTTTCGGTGGAGGGCTCGCCGGGTCTGGA
CGTACTCTGGAGCTCATGCGACGGATGCGGCTTCGCCAGGGTAGTCCTCT
GAAACTGGTTGCAGCGCGGAACCCAGCTTTTCGGTGGAGGGCTCGCCGGG
TCTGGACGTACTCTGGAGCTCATGCGACGGATGCGGCTTCGCCAGGGTAG
TCCTCTGA
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