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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 1549 |
| Cds size | 819 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622924159.7791598-CDS-S-dermatodea_contig105:10658..11477 | 1622924159.7791598-CDS-S-dermatodea_contig105:10658..11477 | Saccorhiza dermatodea SderLu1190fm monoicous | CDS | S-dermatodea_contig105 10659..11477 + |
| 1694079058.439619-CDS-S-dermatodea_contig105:10658..11477 | 1694079058.439619-CDS-S-dermatodea_contig105:10658..11477 | Saccorhiza dermatodea SderLu1190fm monoicous | CDS | S-dermatodea_contig105 10659..11477 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig105.351.1 >prot_S-dermatodea_contig105.351.1 ID=prot_S-dermatodea_contig105.351.1|Name=mRNA_S-dermatodea_contig105.351.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=273bp
MSAATPSGVHEKVGTTSENAARRRRRPRSRSRRRGMDPWDNRSPFMHTQS
SPSGATKHSERPTGAQALRMLSSSKPIFGNVKACDRQRSSCSLSSYPARR
KGPTGEETAAVDRWKSEAEPSGDVPCALPAATNAAAAVRRGDMQACFERL
TVGALIELNHLPNPPRPVQAVLAALACLLGWPWKPSRDSPPRSLFSNAYV
LRGILASVRPYRMSRRQLSALERRLDVQEAAPKRVQGANAAAAVLLDWLQ
AVVACARTEAEHHGDVRGAECR* back to topmRNA from alignment at S-dermatodea_contig105:10550..12098+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig105.351.1 ID=mRNA_S-dermatodea_contig105.351.1|Name=mRNA_S-dermatodea_contig105.351.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1549bp|location=Sequence derived from alignment at S-dermatodea_contig105:10550..12098+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATTTCCCACCGTAGCTGCCTATCGGAGAGCGGTTGCAATCGAGGCTGTCC
AGGCGCAGCTCCGGGAGTGCAGAGAAAAAACGGCGGCAGCTGGTGCTGCA
CGTCGACCAATGTCTGCCGCGACACCCAGCGGCGTTCACGAGAAGGTGGG
AACCACATCGGAAAATGCTGCACGACGAAGGAGGAGGCCCAGGAGTCGAT
CGAGGCGACGCGGCATGGACCCTTGGGATAACCGCTCGCCTTTCATGCAC
ACACAAAGCTCGCCGTCTGGAGCAACGAAGCACAGCGAGCGCCCGACCGG
CGCCCAGGCTCTCAGAATGCTGTCCAGCAGCAAACCAATCTTCGGAAATG
TGAAGGCGTGCGACCGGCAACGCTCATCGTGTTCGCTCTCTTCGTATCCA
GCAAGGCGAAAAGGGCCAACAGGAGAGGAAACGGCCGCCGTAGATCGCTG
GAAAAGTGAAGCAGAACCGAGCGGCGACGTTCCATGCGCTCTTCCTGCTG
CAACAAATGCTGCTGCAGCCGTCAGGAGGGGGGACATGCAGGCTTGCTTT
GAGCGACTAACTGTTGGAGCTCTCATCGAGCTCAACCACCTGCCAAACCC
ACCCAGGCCGGTCCAAGCGGTCCTGGCCGCCTTGGCCTGTCTCTTGGGAT
GGCCATGGAAGCCCTCGCGGGATTCGCCACCGCGATCTCTGTTCAGCAAC
GCATACGTCCTGCGAGGTATTTTGGCCTCCGTCCGCCCTTACCGGATGTC
TCGCCGGCAACTCTCTGCTTTGGAGCGTAGGCTGGATGTCCAGGAGGCAG
CGCCCAAAAGAGTCCAGGGGGCGAACGCTGCTGCCGCTGTTTTGCTCGAT
TGGCTCCAAGCAGTTGTAGCTTGCGCGCGTACGGAAGCTGAACACCATGG
CGATGTGCGTGGAGCTGAGTGCCGGTGAGGTCCCATATACCCTGTACCCA
GTAGTAGTACGCCTTGGTGCTTGAAGGAGGTCGTCAGACAGAGAGCGGGA
GTGCAAGCCTTCGCCGAGGACGCTGGCAGGATATGGCCGACGACCTGGTA
TTCTATAGTAAGCCCCGTTTTTCGTGAAGGCGCGGTAGTAAGTCGCCTTG
GGTGCGTTAAAACACAGCAGGTTGACAGGGCCGTGGGGTGCTTGAGCCAT
AGGCCGACGCAGGAAAGAAAGGTGAATTGATCAAGCATGATCAGCGTCTG
CTAGAGTACAGTAGCGATTGGGTTCGGCTTTTTGTTCATATAGTCCGGAT
CATGTATCCAGTTTGTGAGACCATCCTGGACGAAATGTGTGAGGTAGGTA
CTTGATAATCATTTTAAAAGCTAATTGCAGTTCTTCGTATAAATAATTAT
ACTTGTACACGCAAGAGCAAGGGCTGACGAAACGAGGTTAGCTACGCCAG
CCGGAGCAGTGATTGCGGAGTACGATAAGTTGTGTACTGGGGGATATCAA
TTTACGAAAACTGACGAGAAATGCTACATGCGATGCCGGCGATGCATTTA
ATACAAAGGCAAGTTTTGTCACACCAACAGCTGTAGTACATACGACGCG back to topCoding sequence (CDS) from alignment at S-dermatodea_contig105:10550..12098+ >mRNA_S-dermatodea_contig105.351.1 ID=mRNA_S-dermatodea_contig105.351.1|Name=mRNA_S-dermatodea_contig105.351.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1638bp|location=Sequence derived from alignment at S-dermatodea_contig105:10550..12098+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGTCTGCCGCGACACCCAGCGGCGTTCACGAGAAGGTGGGAACCACATC
GGAAAATGCTGCACGACGAAGGAGGAGGCCCAGGAGTCGATCGAGGCGAC
GCGGCATGGACCCTTGGGATAACCGCTCGCCTTTCATGCACACACAAAGC
TCGCCGTCTGGAGCAACGAAGCACAGCGAGCGCCCGACCGGCGCCCAGGC
TCTCAGAATGCTGTCCAGCAGCAAACCAATCTTCGGAAATGTGAAGGCGT
GCGACCGGCAACGCTCATCGTGTTCGCTCTCTTCGTATCCAGCAAGGCGA
AAAGGGCCAACAGGAGAGGAAACGGCCGCCGTAGATCGCTGGAAAAGTGA
AGCAGAACCGAGCGGCGACGTTCCATGCGCTCTTCCTGCTGCAACAAATG
CTGCTGCAGCCGTCAGGAGGGGGGACATGCAGGCTTGCTTTGAGCGACTA
ACTGTTGGAGCTCTCATCGAGCTCAACCACCTGCCAAACCCACCCAGGCC
GGTCCAAGCGGTCCTGGCCGCCTTGGCCTGTCTCTTGGGATGGCCATGGA
AGCCCTCGCGGGATTCGCCACCGCGATCTCTGTTCAGCAACGCATACGTC
CTGCGAGGTATTTTGGCCTCCGTCCGCCCTTACCGGATGTCTCGCCGGCA
ACTCTCTGCTTTGGAGCGTAGGCTGGATGTCCAGGAGGCAGCGCCCAAAA
GAGTCCAGGGGGCGAACGCTGCTGCCGCTGTTTTGCTCGATTGGCTCCAA
GCAGTTGTAGCTTGCGCGCGTACGGAAGCTGAACACCATGGCGATGTGCG
TGGAGCTGAGTGCCGGTGAATGTCTGCCGCGACACCCAGCGGCGTTCACG
AGAAGGTGGGAACCACATCGGAAAATGCTGCACGACGAAGGAGGAGGCCC
AGGAGTCGATCGAGGCGACGCGGCATGGACCCTTGGGATAACCGCTCGCC
TTTCATGCACACACAAAGCTCGCCGTCTGGAGCAACGAAGCACAGCGAGC
GCCCGACCGGCGCCCAGGCTCTCAGAATGCTGTCCAGCAGCAAACCAATC
TTCGGAAATGTGAAGGCGTGCGACCGGCAACGCTCATCGTGTTCGCTCTC
TTCGTATCCAGCAAGGCGAAAAGGGCCAACAGGAGAGGAAACGGCCGCCG
TAGATCGCTGGAAAAGTGAAGCAGAACCGAGCGGCGACGTTCCATGCGCT
CTTCCTGCTGCAACAAATGCTGCTGCAGCCGTCAGGAGGGGGGACATGCA
GGCTTGCTTTGAGCGACTAACTGTTGGAGCTCTCATCGAGCTCAACCACC
TGCCAAACCCACCCAGGCCGGTCCAAGCGGTCCTGGCCGCCTTGGCCTGT
CTCTTGGGATGGCCATGGAAGCCCTCGCGGGATTCGCCACCGCGATCTCT
GTTCAGCAACGCATACGTCCTGCGAGGTATTTTGGCCTCCGTCCGCCCTT
ACCGGATGTCTCGCCGGCAACTCTCTGCTTTGGAGCGTAGGCTGGATGTC
CAGGAGGCAGCGCCCAAAAGAGTCCAGGGGGCGAACGCTGCTGCCGCTGT
TTTGCTCGATTGGCTCCAAGCAGTTGTAGCTTGCGCGCGTACGGAAGCTG
AACACCATGGCGATGTGCGTGGAGCTGAGTGCCGGTGA back to top
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