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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 456 |
| Cds size | 438 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622924158.8107092-UTR-S-dermatodea_contig10475:4673..4691 | 1622924158.8107092-UTR-S-dermatodea_contig10475:4673..4691 | Saccorhiza dermatodea SderLu1190fm monoicous | UTR | S-dermatodea_contig10475 4674..4691 - |
| 1694079057.8888838-UTR-S-dermatodea_contig10475:4673..4691 | 1694079057.8888838-UTR-S-dermatodea_contig10475:4673..4691 | Saccorhiza dermatodea SderLu1190fm monoicous | UTR | S-dermatodea_contig10475 4674..4691 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10475.334.1 >prot_S-dermatodea_contig10475.334.1 ID=prot_S-dermatodea_contig10475.334.1|Name=mRNA_S-dermatodea_contig10475.334.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=146bp
MAVVEQKLDAKGAELAQAKSETEAMRELCDRRADKMSDQMALIAEQGNEC
AALKKMLEDASQVIDGTKDRVARQDGTIEDMKAGDAQKEAEIARLAAEVA
RLLDLSIRPGAKEEACAIASPSGSSATSLVSPCSSASPASGGSLF* back to topmRNA from alignment at S-dermatodea_contig10475:2862..4691- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig10475.334.1 ID=mRNA_S-dermatodea_contig10475.334.1|Name=mRNA_S-dermatodea_contig10475.334.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1830bp|location=Sequence derived from alignment at S-dermatodea_contig10475:2862..4691- (Saccorhiza dermatodea SderLu1190fm monoicous)
GCGGAGTCGGCGAGAACGATGGCCGTCGTGGAGCAGAAGCTGGACGCGAA
GGGCGCGGAGCTGGCGCAGGCGAAGAGCGAGACCGAGGCGATGCGGGAGC
TGTGCGACCGCCGAGCGGACAAGATGAGCGACCAGATGGCCCTGATCGCG
GAGCAAGGGAACGAGTGCGCAGCCTTGAAGAAGATGCTGGAGGTGAGAAG
GGGGGGGGGGGGGGGGGGGGGGGGGGCCCCCCCGACGGGGGGGCGTGTTG
GTTTTTTTTTTTGTTTGTTTTNNNNNNNNNNGAGGAGGGGAGGGAGGGGG
GGGGGGGGGGGGGGTGGGGGTGTTCGGCATCCACTCATGTTGGGTGCACG
TATGTTTTTGTTTTGGTTTGTTTTGTATCTCGCTCCCAAACAACCGATCG
ACCAACCAACCGGCCTTATATCCGGATCCCTTGTAAGGGCACCACAAGAG
AACGTTCCTTCTCTCTCTCCCCCAGTACGTACATACAGCATTTATGTTCT
TCTTCTTGGCTCAACCTCTGTCGCGGAAAAAGCACAACGTGAGTAAGCAA
ATTCCGAGGAAATACTATTGGCGAGAGAAGCTGAGGGACTCACTTGGCTG
ATGCCCGATGCGACAAATCACGCCGAATCTTAGAAATATAACTATTCTTG
CTGGTACTAGACAAGGTAGTCCCCAGTTGGAGTTTTCACCCGACGAGCCA
CCGAGGCTGTCTTGGTGTTCGCTCGGTCTAGGTTCGAATTTCCCGGCGGA
TTTTTCCACGTGAGCACAGCCCGGAGCTTGCTCTCGTGTGCGTCTTTGAC
CGTAACCAGGCCCCCACCCCCTCACCCTCCTCACGTTGGTGAAATTCGAT
ATCACTGCGGGAAAGATGGAGTAGCGTGCGGTACTCGAGGCGCGGCCTGT
TGTGCCTAACAGCGCGTAGGAAGACTATGCCCCTCCCCCGGAAGAAAGCC
AGACGATGTATATACGTATCCCCCCCCCGGTATCATGCCGATTGCCGTTA
TTGTTGTTCGCCCGAAAGGACGCTAGCCAGGTCATCGACGGCACCAAAGA
CCGCGTCGCGCGCCAGGATGGCACGATCGAGGACATGAAGGCGGGTGACG
CACAGAAGGAAGCCGAGATCGCGCGGCTGGCAGCGGAGGTCGCCCGGCTT
CTCGACCTGAGCATCCGCCCAGGCGCGAAAGAAGAGGCCTGTGCGATCGC
CAGGTGCGATGCATGCCGGGCTGCGGCACACGGGCTCAAACGCCTACTCT
TCGGTGCTTTCCTGTCTCGTCTTGGCGTCTAGGCTGTAGGCGTTGGCGCG
TGGCCGTCGTGTCACGAAGCGATGCAGTGTTGGAAGCGTTCCTCTCTTTT
TTTGTAAATATATTCCTTAGTGTACCCGTGACGCCTTTACGCCGCTGCAC
GCGCGAGAATGCGCCTTCCTGTCGGTTGATTTGTGTTGATGCGGGGGTTA
CCCGCGTTCCGTCAGCGCTACACTATTCATACAAGTAGGTGCTTTCGTTT
TGCAGCCTTGACTTGGCGGCTTTGTGTATCCCCCCCCCCCTCCCCCTTAA
ATGAGCGCGCGAGCATCGCATCGCATCGCGCTTCGAGCAAACGTACAACG
CCCCCCAGTTGTATTCAGTATACGTAATATCACACATACCCCTGTCTCGC
TCCCATATTTTTTTGCTCATGCCGTCACGCTCACCGGTATTTATGTTCCT
CCCTGCCTGCCACGCCCCTCGCGGTACTCGACCTATCCGCGCCCCCTTCA
GCCCTAGCGGAAGCAGCGCCACGAGCCTTGTGAGCCCGTGCAGCTCCGCT
TCCCCGGCGAGCGGCGGCTCGTTGTTTTGA back to topCoding sequence (CDS) from alignment at S-dermatodea_contig10475:2862..4691- >mRNA_S-dermatodea_contig10475.334.1 ID=mRNA_S-dermatodea_contig10475.334.1|Name=mRNA_S-dermatodea_contig10475.334.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=876bp|location=Sequence derived from alignment at S-dermatodea_contig10475:2862..4691- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGCCGTCGTGGAGCAGAAGCTGGACGCGAAGGGCGCGGAGCTGGCGCA
GGCGAAGAGCGAGACCGAGGCGATGCGGGAGCTGTGCGACCGCCGAGCGG
ACAAGATGAGCGACCAGATGGCCCTGATCGCGGAGCAAGGGAACGAGTGC
GCAGCCTTGAAGAAGATGCTGGAGATGGCCGTCGTGGAGCAGAAGCTGGA
CGCGAAGGGCGCGGAGCTGGCGCAGGCGAAGAGCGAGACCGAGGCGATGC
GGGAGCTGTGCGACCGCCGAGCGGACAAGATGAGCGACCAGATGGCCCTG
ATCGCGGAGCAAGGGAACGAGTGCGCAGCCTTGAAGAAGATGCTGGAGGA
CGCTAGCCAGGTCATCGACGGCACCAAAGACCGCGTCGCGCGCCAGGATG
GCACGATCGAGGACATGAAGGCGGGTGACGCACAGAAGGAAGCCGAGATC
GCGCGGCTGGCAGCGGAGGTCGCCCGGCTTCTCGACCTGAGCATCCGCCC
AGGCGCGAAAGAAGAGGCCTGTGCGATCGCCAGGACGCTAGCCAGGTCAT
CGACGGCACCAAAGACCGCGTCGCGCGCCAGGATGGCACGATCGAGGACA
TGAAGGCGGGTGACGCACAGAAGGAAGCCGAGATCGCGCGGCTGGCAGCG
GAGGTCGCCCGGCTTCTCGACCTGAGCATCCGCCCAGGCGCGAAAGAAGA
GGCCTGTGCGATCGCCAGCCCTAGCGGAAGCAGCGCCACGAGCCTTGTGA
GCCCGTGCAGCTCCGCTTCCCCGGCGAGCGGCGGCTCGTTGTTTTGACCC
TAGCGGAAGCAGCGCCACGAGCCTTGTGAGCCCGTGCAGCTCCGCTTCCC
CGGCGAGCGGCGGCTCGTTGTTTTGA back to top
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