mRNA_S-dermatodea_contig10435.318.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10435.318.1 vs. uniprot
Match: D7FI93_ECTSI (DNA replication licensing factor MCM7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI93_ECTSI) HSP 1 Score: 282 bits (722), Expect = 7.550e-89 Identity = 146/148 (98.65%), Postives = 148/148 (100.00%), Query Frame = 1
Query: 1 VSRDAVTGEMALEGGALVLADRGICAIDEFDKMDESDRTAIHEVMEQQTVSIAKAGITTTLNARAAVLAAANPLYGRYNKRRAMSENINLPNSLLSRFDLLFLILDKADMESDIALARHVTFVHQFKKNPELDFEPYDPKFLKLYISQ 444
VS+DAVTGEMALEGGALVLADRGICAIDEFDKMDESDRTAIHEVMEQQTVSIAKAGITTTLNARAAVLAAANPLYGRYNKRRAMSENINLPNSLLSRFDLLFLILDKADMESDIALARHVTFVHQFKKNPELDFEP+DPKFLKLYISQ
Sbjct: 426 VSKDAVTGEMALEGGALVLADRGICAIDEFDKMDESDRTAIHEVMEQQTVSIAKAGITTTLNARAAVLAAANPLYGRYNKRRAMSENINLPNSLLSRFDLLFLILDKADMESDIALARHVTFVHQFKKNPELDFEPFDPKFLKLYISQ 573
BLAST of mRNA_S-dermatodea_contig10435.318.1 vs. uniprot
Match: A0A835YVG8_9STRA (DNA replication licensing factor MCM7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVG8_9STRA) HSP 1 Score: 245 bits (625), Expect = 2.740e-74 Identity = 125/148 (84.46%), Postives = 135/148 (91.22%), Query Frame = 1
Query: 1 VSRDAVTGEMALEGGALVLADRGICAIDEFDKMDESDRTAIHEVMEQQTVSIAKAGITTTLNARAAVLAAANPLYGRYNKRRAMSENINLPNSLLSRFDLLFLILDKADMESDIALARHVTFVHQFKKNPELDFEPYDPKFLKLYISQ 444
VSRD VTG+MALEGGALVLAD GIC IDEFDKM+ESDRTAIHEVMEQQTVSIAKAGITTTLNARAAVLAAANPLYGRYN+ R MSENINLPNSL+SRFDL+FL+LD+ADME+D ALARHVT+VHQ NPELDF P DP F+K YISQ
Sbjct: 426 VSRDPVTGDMALEGGALVLADHGICCIDEFDKMEESDRTAIHEVMEQQTVSIAKAGITTTLNARAAVLAAANPLYGRYNRNRPMSENINLPNSLISRFDLIFLLLDRADMETDTALARHVTYVHQHGANPELDFVPLDPTFIKHYISQ 573
BLAST of mRNA_S-dermatodea_contig10435.318.1 vs. uniprot
Match: F0YGS7_AURAN (DNA replication licensing factor MCM7 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGS7_AURAN) HSP 1 Score: 231 bits (588), Expect = 1.920e-70 Identity = 117/143 (81.82%), Postives = 130/143 (90.91%), Query Frame = 1
Query: 1 VSRDAVTGEMALEGGALVLADRGICAIDEFDKMDESDRTAIHEVMEQQTVSIAKAGITTTLNARAAVLAAANPLYGRYNKRRAMSENINLPNSLLSRFDLLFLILDKADMESDIALARHVTFVHQFKKNPELDFEPYDPKFLK 429
V RDA T EM+LEGGALVLAD GIC IDEFDKMDE DRTAIHEVMEQQTVSIAKAGITTTLNAR+AVLAAANPLYGRYNK++ M+ENINLPNSLLSRFDLLFL+LDK ++E+DIALARHVT VH+F NP+LDFEPYD F++
Sbjct: 434 VVRDATTSEMSLEGGALVLADCGICCIDEFDKMDEHDRTAIHEVMEQQTVSIAKAGITTTLNARSAVLAAANPLYGRYNKKKTMAENINLPNSLLSRFDLLFLLLDKPEVEADIALARHVTHVHRFLSNPDLDFEPYDSVFIR 576
BLAST of mRNA_S-dermatodea_contig10435.318.1 vs. uniprot
Match: A0A6I9SK60_SESIN (DNA helicase n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9SK60_SESIN) HSP 1 Score: 211 bits (537), Expect = 1.710e-66 Identity = 108/147 (73.47%), Postives = 126/147 (85.71%), Query Frame = 1
Query: 1 VSRDAVTGEMALEGGALVLADRGICAIDEFDKMDESDRTAIHEVMEQQTVSIAKAGITTTLNARAAVLAAANPLYGRYNKRRAMSENINLPNSLLSRFDLLFLILDKADMESDIALARHVTFVHQFKKNPELDFEPYDPKFLKLYIS 441
V +D VT EM LEGGALVLAD GICAIDEFDKMDESDRT+IHEVMEQQTVSIAKAGITT+LNAR AVLAAANP +GRY+ RR +ENINLP +LLSRFDLL+LILD+ADM++D+ +ARHV VHQ K++P+L F P +P L+ YIS
Sbjct: 50 VQKDPVTNEMVLEGGALVLADMGICAIDEFDKMDESDRTSIHEVMEQQTVSIAKAGITTSLNARTAVLAAANPAWGRYDLRRTPAENINLPPALLSRFDLLWLILDRADMDTDLEMARHVLHVHQAKESPDLGFTPLEPSVLRAYIS 196
BLAST of mRNA_S-dermatodea_contig10435.318.1 vs. uniprot
Match: A0A2D4CAX7_PYTIN (DNA replication licensing factor MCM7 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CAX7_PYTIN) HSP 1 Score: 221 bits (564), Expect = 8.570e-66 Identity = 114/147 (77.55%), Postives = 129/147 (87.76%), Query Frame = 1
Query: 1 VSRDAVTGEMALEGGALVLADRGICAIDEFDKMDESDRTAIHEVMEQQTVSIAKAGITTTLNARAAVLAAANPLYGRYNKRRAMSENINLPNSLLSRFDLLFLILDKADMESDIALARHVTFVHQFKKNPELDFEPYDPKFLKLYIS 441
V RD +T EM LEGGALVLAD GICAIDEFDKM+ESDRTAIHEVMEQQTVSIAKAGITTTLNAR +VLAAANP+YGRYNKR + SENINLPN+LLSRFDLLFL+LD A+ E D ALARHVT+VH+F KNPE+ FEP P+ L+ +I+
Sbjct: 391 VVRDNITKEMTLEGGALVLADMGICAIDEFDKMEESDRTAIHEVMEQQTVSIAKAGITTTLNARTSVLAAANPIYGRYNKRLSASENINLPNALLSRFDLLFLLLDVANYEKDEALARHVTYVHRFCKNPEIGFEPVRPEVLRYFIA 537
BLAST of mRNA_S-dermatodea_contig10435.318.1 vs. uniprot
Match: A0A7J7LL11_9MAGN (DNA helicase n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7LL11_9MAGN) HSP 1 Score: 216 bits (549), Expect = 9.010e-66 Identity = 112/147 (76.19%), Postives = 126/147 (85.71%), Query Frame = 1
Query: 1 VSRDAVTGEMALEGGALVLADRGICAIDEFDKMDESDRTAIHEVMEQQTVSIAKAGITTTLNARAAVLAAANPLYGRYNKRRAMSENINLPNSLLSRFDLLFLILDKADMESDIALARHVTFVHQFKKNPELDFEPYDPKFLKLYIS 441
V +D VT EM LEGGALVLAD GICAIDEFDKMDESDRTAIHEVMEQQTVSIAKAGITT+LNAR AVLAAANP +GRY+ RR +ENINLP +LLSRFDLL+LILDKADM+SD+ LARHV +VHQ K++P L F P +P L+ YIS
Sbjct: 157 VQKDPVTNEMVLEGGALVLADMGICAIDEFDKMDESDRTAIHEVMEQQTVSIAKAGITTSLNARTAVLAAANPAWGRYDLRRTPAENINLPPALLSRFDLLWLILDKADMDSDLELARHVVYVHQNKESPALGFTPLEPSVLRAYIS 303
BLAST of mRNA_S-dermatodea_contig10435.318.1 vs. uniprot
Match: B8C2X2_THAPS (DNA replication licensing factor MCM7 (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C2X2_THAPS) HSP 1 Score: 219 bits (558), Expect = 1.030e-65 Identity = 113/153 (73.86%), Postives = 132/153 (86.27%), Query Frame = 1
Query: 1 VSRDAVTGEMALEGGALVLADRGICAIDEFDKMDESDRTAIHEVMEQQTVSIAKAGITTTLNARAAVLAAANPLYGRYNKRRAMSENINLPNSLLSRFDLLFLILDKADMESDIALARHVTFVHQFK-----KNPELDFEPYDPKFLKLYISQ 444
+++D TGE+ALEGGALVLADRGICAIDEFDKMDE+DRTAIHEVMEQQTVS+AKAGI TLNARAAVLAAANPLYGRYN+R+++SEN+NLPNSLLSRFDL+FLILD AD++ D+ALARHVTFVHQ + K+PE D P L+ YIS+
Sbjct: 311 ITKDVTTGELALEGGALVLADRGICAIDEFDKMDEADRTAIHEVMEQQTVSVAKAGIVATLNARAAVLAAANPLYGRYNRRKSLSENVNLPNSLLSRFDLMFLILDVADVDRDMALARHVTFVHQNEGVDSTKDPEYDQPAVSPHLLREYISR 463
BLAST of mRNA_S-dermatodea_contig10435.318.1 vs. uniprot
Match: A0A068TU81_COFCA (DNA helicase n=1 Tax=Coffea canephora TaxID=49390 RepID=A0A068TU81_COFCA) HSP 1 Score: 211 bits (537), Expect = 1.660e-65 Identity = 108/147 (73.47%), Postives = 126/147 (85.71%), Query Frame = 1
Query: 1 VSRDAVTGEMALEGGALVLADRGICAIDEFDKMDESDRTAIHEVMEQQTVSIAKAGITTTLNARAAVLAAANPLYGRYNKRRAMSENINLPNSLLSRFDLLFLILDKADMESDIALARHVTFVHQFKKNPELDFEPYDPKFLKLYIS 441
V +D VT EM LEGGALVLAD GICAIDEFDKMDESDRTAIHEVMEQQTVSIAKAGITT+LNAR AVLAAANP +GRY+ RR +ENINLP +LLSRFDLL+LILD+ADM++D+ +ARH+ +VHQ K++P L F P +P L+ YIS
Sbjct: 85 VQKDPVTYEMVLEGGALVLADMGICAIDEFDKMDESDRTAIHEVMEQQTVSIAKAGITTSLNARTAVLAAANPAWGRYDLRRTPAENINLPPALLSRFDLLWLILDRADMDADLEMARHIVYVHQNKESPALGFTPLEPSVLRAYIS 231
BLAST of mRNA_S-dermatodea_contig10435.318.1 vs. uniprot
Match: A0A8K1FIE6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FIE6_PYTOL) HSP 1 Score: 221 bits (564), Expect = 2.630e-65 Identity = 113/147 (76.87%), Postives = 129/147 (87.76%), Query Frame = 1
Query: 1 VSRDAVTGEMALEGGALVLADRGICAIDEFDKMDESDRTAIHEVMEQQTVSIAKAGITTTLNARAAVLAAANPLYGRYNKRRAMSENINLPNSLLSRFDLLFLILDKADMESDIALARHVTFVHQFKKNPELDFEPYDPKFLKLYIS 441
V RD +T EM LEGGALVLAD GICAIDEFDKM+ESDRTAIHEVMEQQTVSIAKAGITTTLNAR +VLAAANP+YGRYNKR + SENINLPN+LLSRFDLLFL+LD A+ E D ALARHVT+VH+F KNP++ FEP P+ L+ +I+
Sbjct: 473 VVRDTMTKEMTLEGGALVLADMGICAIDEFDKMEESDRTAIHEVMEQQTVSIAKAGITTTLNARTSVLAAANPIYGRYNKRLSASENINLPNALLSRFDLLFLLLDVANYEKDEALARHVTYVHRFSKNPDMTFEPVRPEVLRYFIA 619
BLAST of mRNA_S-dermatodea_contig10435.318.1 vs. uniprot
Match: A0A2D4BFW7_PYTIN (DNA helicase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BFW7_PYTIN) HSP 1 Score: 221 bits (564), Expect = 2.730e-65 Identity = 114/147 (77.55%), Postives = 129/147 (87.76%), Query Frame = 1
Query: 1 VSRDAVTGEMALEGGALVLADRGICAIDEFDKMDESDRTAIHEVMEQQTVSIAKAGITTTLNARAAVLAAANPLYGRYNKRRAMSENINLPNSLLSRFDLLFLILDKADMESDIALARHVTFVHQFKKNPELDFEPYDPKFLKLYIS 441
V RD +T EM LEGGALVLAD GICAIDEFDKM+ESDRTAIHEVMEQQTVSIAKAGITTTLNAR +VLAAANP+YGRYNKR + SENINLPN+LLSRFDLLFL+LD A+ E D ALARHVT+VH+F KNPE+ FEP P+ L+ +I+
Sbjct: 476 VVRDNITKEMTLEGGALVLADMGICAIDEFDKMEESDRTAIHEVMEQQTVSIAKAGITTTLNARTSVLAAANPIYGRYNKRLSASENINLPNALLSRFDLLFLLLDVANYEKDEALARHVTYVHRFCKNPEIGFEPVRPEVLRYFIA 622 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10435.318.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10435.318.1 >prot_S-dermatodea_contig10435.318.1 ID=prot_S-dermatodea_contig10435.318.1|Name=mRNA_S-dermatodea_contig10435.318.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=139bp MALEGGALVLADRGICAIDEFDKMDESDRTAIHEVMEQQTVSIAKAGITTback to top mRNA from alignment at S-dermatodea_contig10435:2202..7919+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10435.318.1 ID=mRNA_S-dermatodea_contig10435.318.1|Name=mRNA_S-dermatodea_contig10435.318.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5718bp|location=Sequence derived from alignment at S-dermatodea_contig10435:2202..7919+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10435:2202..7919+ >mRNA_S-dermatodea_contig10435.318.1 ID=mRNA_S-dermatodea_contig10435.318.1|Name=mRNA_S-dermatodea_contig10435.318.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=834bp|location=Sequence derived from alignment at S-dermatodea_contig10435:2202..7919+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |