mRNA_S-dermatodea_contig1042.306.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig1042.306.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 293 bits (749), Expect = 4.360e-89 Identity = 208/568 (36.62%), Postives = 283/568 (49.82%), Query Frame = 1
Query: 28 MVHMLNAKGQVPTHRIVVSRMREIRAGVAATIGDVLKDQWVSITTDGWASCANESYMSFTVVSINEVWEMVALALSCEKKEGPTKGEDMAEAIEVMVNNHGLKGHVVVGNTDCEPSMVKAGRLL-TERNVFKHIGCACHRLECTTALVFNGPGVKKTMVLARALVTRYTKSTQMATRLEDMCRTINVVSLRVIQDVEMRWWSTLSMTGRLVYLRRAIELHETVDGNPSLLEPVGWRVLELLHPVLEPFSLVQKKLE-SERVTVSLVVPLIADLRGSLQMEIEELEEFS--AAHAIGSKARDALLPCVEAL-----------------------------REQVMATALDARTKMLYGVPPTSTRAFGRRLRRRPRTSKQRRRHVLRWH---------------------HPRQLLGQPLLLALEQLGSRVGPGHLPVLLAKEDSAKASCKLLRRRLRQRPQHAPRRLCRRITSCVRQRMMDQSSSPSPLVW-------------------WRENARKLPLLAALAWRLLAIPASQAQSERVFSSAGHIVTKTRNKLASENVELLVGLK 1512
MV LN + +VP+ R ++SRMR ++ + + + +L ++V+ITTDGW S NESYMS TV I+ W++ L+L C K G T GED+A + MV H L G V+ TDCEPSM+KAGRLL + + HIGC+ HR+E TT+ VFNG + + LAR LV RY KS+QMA RL +C + + L V+QDVE RWWST +M RL+YL +AI+LHE++D LL W VL L+ P+L PF QK LE ++ VT S+ + +A+LR L+ I +L+ + KA +A+ P EAL R+QV ATALD R K LYG+ Q+R H W + P+ LG G P + A E +A R ++ + V + ++P VW WR+ + PLLAALA R+LAIP+SQAQSERVFS+AG VT TR++L ENVELLV L+
Sbjct: 1 MVSALNKRAKVPSRRELLSRMRAVKTALESEVALMLDAEFVAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLGA-LGLARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQQGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGI--------------------QQREHAGVWRAVASAAVDIALGKHAGDKAPASAEKPASDPVQTQPAPLGGGQGASKRPRMSAFEAAAAXXXXXXXXXXXXXSADEKRE---QLVAIVDMEVSAFKAAPGIRVWDMQKTNTGDKKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYLR 544
BLAST of mRNA_S-dermatodea_contig1042.306.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE) HSP 1 Score: 286 bits (731), Expect = 2.560e-87 Identity = 189/521 (36.28%), Postives = 275/521 (52.78%), Query Frame = 1
Query: 1 VVDSKFFKDMVHMLNAKGQVPTHRIVVSRMREIRAGVAATIGDVLKDQWVSITTDGWASCANESYMSFTVVSINEVWEMVALALSCEKKEGPTKGEDMAEAIEVMVNNHGLKGHVVVGNTDCEPSMVKAGRLLTERNVFKHIGCACHRLECTTALVFNGPGVKKTMVLARALVTRYTKSTQMATRLEDMCRTINVVSLRVIQDVEMRWWSTLSMTGRLVYLRRAIELHETVDGNPSLLEPVGWRVLELLHPVLEPFSLVQKKLESER-VTVSLVVPLIADLRGSLQMEIEELEEFSA-AHAIGSKARDALLPCVEALR-------------EQVMATALDARTKMLYGVPPTSTRAFGRRLRRRPRTSKQRRRHVLRWHHPRQLLGQPLLLALEQLGSR--VGPGHLPVLLAKEDSAKASCKLLRRRLRQRPQHAPRRLCRRITSCVRQRMMDQSSSPSPLVWWRENARKLPLLAALAWRLLAIPASQAQSERVFSSAGHIVTKTRNKLASENVELLVGLK 1512
+V+++ F +MV L ++ VP R+ + ++R ++ G+ + L + V++T+DGW S +N++YM FT I+ +++VAL + C+K G T GED+ EA++ M+ +GL V TDCEPSMVKAGRLL E H+GC CHRLE T+ F GPGV K + LAR +VTRY S+Q + RLE M + V +V+QDVE RWWST + RL+ LRR I HE +D P LL+ W VL+++ P+ +PF L QK E+ + VTVSLV+P IADLR L +E L+ + A +I ++A+ + + +R +QV+ATALD R+K LYG+ T H W + + + +A+E + G L+ E +A P +Q+ + SSS S R+L IPASQ QSERVFSSAG +VTKTR ++ ENVEL++ L+
Sbjct: 1 MVENEHFIEMVRFLKSRATVPHKRLFLEKLRGMKKGLDQEVLGRLTGEHVAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQMRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADLRDELDEAVERLQAHACPAESIVAEAKKDVFFAPKHVRPTSVIVEPRGFKKKQVLATALDPRSKSLYGIEETE--------------------HSDVWEA---VANEAVKVAIEAKATEDTQSAGASSSLIPVEPAAXXXXXXXXXXDFAAASAVP---------GDKQQSANASSSTS--------------------RVLCIPASQPQSERVFSSAGLVVTKTRARMDPENVELMLFLR 469
BLAST of mRNA_S-dermatodea_contig1042.306.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 276 bits (706), Expect = 1.480e-79 Identity = 197/566 (34.81%), Postives = 265/566 (46.82%), Query Frame = 1
Query: 148 VSITTDGWASCANESYMSFTVVSINEVWEMVALALSCEKKEGPTKGEDMAEAIEVMVNNHGLKGHVVVGNTDCEPSMVKAGRLLTERNVFKHIGCACHRLECTTALVFNGPGVKKTMVLARALVTRYTKSTQMATRLEDMCRTINVVSLRVIQDVEMRWWSTLSMTGRLVYLRRAIELHETVDGNPSLLEPVGWRVLELLHPVLEPFSLVQKKLE-SERVTVSLVVPLIADLRGSLQMEIEELEEFSA-AHAIGSKARDALLPCVEAL-----------------------------REQVMATALDARTKMLYGVPPTSTRAFGRRLRRRPRTSKQRRRHVLRWHHPRQLLGQPLLLALEQLGSR-------------------------------------------------VGPGHLPVLLA------------------------KEDSAKASCKLLRRRLRQRPQHAPRRLCRRITS-------CVRQRMMDQSSSPSPLVWWRENARKLPLLAALAWRLLAIPASQAQSERVFSSAGHIVTKTRNKLASENVELLVGLK 1512
V++T+DGW +N++YMSFT I+ +++VAL L C+K T GED+ EA++ M+ +GL G V TDCE SMVKAGRLL E H+GC CHRLE T+ F GPGV K + LAR +VTRYT S+Q + RLE +C + V V+QDVE RWWST RL+ LRR I HE +D P LL+ W VL+L+ +L+PF QK LE S+ VTV LV P IADL+ L +E L+ S A +I ++A+ ++ C +AL +EQV+ATAL R+K LYG+ T H W + + +A+E + G P+ + K+ SA AS LRR++ + R + + V Q PL WWR AR+ P LA+LA R+L IPA QAQSERVFSSAG +VTKTR ++ ENV L+V L+
Sbjct: 6 VALTSDGWTPASNDTYMSFTCTYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQVCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGLDEAVERLQAHSCPAESIVAEAKKDVILCAQALQTDLSRRWGDRTDVLVYTEGPRRQPRGFKKEQVLATALGPRSKSLYGIEETE--------------------HSDVWDAG---ANEAVKVAIEAKATEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQSAGASSSPIPVEPAXXXXXXXXXXXXXXXXXXAHGDKQQSANASSSPLRRQMES-------IISREVDAFKITPGLAVSWEEKGQEVRGKPLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFLR 541
BLAST of mRNA_S-dermatodea_contig1042.306.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE) HSP 1 Score: 258 bits (658), Expect = 7.340e-76 Identity = 194/544 (35.66%), Postives = 264/544 (48.53%), Query Frame = 1
Query: 19 FKDMVHMLNAKGQVPTHRIVVSRMREIRAGVAATIGDVLKDQWVSITTDGWASCANESYMSFTVVSINEVWEMVALALSCEKKEGPTKGEDMAEAIEVMVNNHGLKGHVVVGNTDCEPSMVKAGRLL-TERNVFKHIGCACHRLECTTALVFNGPGVKKTMVLARALVTRYTKSTQMATRLEDMCRTINVVSLRVIQDVEMRWWSTLSMTGRLVYLRRAIELHETVDGNPSLLEPVGWRVLELLHPVLEPFSLVQKKLESER-VTVSLVVPLIADLRGSLQMEIEEL---EEFSAAHAIGSKARDALLPCVEALRE-----------------------------QVMATALDARTKMLYGVPPTSTRAFGRRLRRRPRTSKQRRRHVLRWHHPRQLLGQPLLLALEQLGSR------VGPGHLPV-----------------LLAKEDSAKASCKLLRRRLRQRPQHAPRRLCRRITSCVRQRMMDQSSSPS----------------PLVWWRENARKLPLLAALAWRLLAIPASQAQSERV 1431
F +V LN K + P R +V +MREI+ + + + +L D++V+ITTDGW S +NESYMS TV I+ W++ L+L+C K G T GED+A I M+ HGL G V TDCEPSMVKAGRLL + +HIGC+ HR+E TT+ VFNG + + ARA+V RY +S+QM+ RL + + L V+QDVE RWWS+ +M RL+YL +AI+LHE+ D +L W VL L+ P+L PF QK LE + VT S+ VP I +LR L+ I +L + F + A +A +A+LP EAL E QV ATA+D R K LYG+ H W R + + + +A E+ S P PV L A E +A A + R ++ S V + ++P PL WWR + P LAALA R+LAIP+SQA SERV
Sbjct: 34 FHAVVSGLNKKARAPIRRALVEKMREIKKNLESEVALMLDDEYVAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLGA-LAKARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLEAAIADLRATDRFGIS-ASTREAMEAVLPDAEALWEDFLNRWGDGSSILEYREGKRRQPQGFKLQQVCATAVDPRAKHLYGIRQAE--------------------HASVW---RAVATKAVDIAAEKFSSDNTATSGSAPAAQPVGTPPVAPGGQGAPKRARLSAFEAAAAAHAGAAASSAGGQTLDEKRE---QLASVVDLEVASFQTTPGISIWYWGTDGKKVYNDPLDWWRTRQMEFPHLAALARRVLAIPSSQAHSERV 549
BLAST of mRNA_S-dermatodea_contig1042.306.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE) HSP 1 Score: 222 bits (565), Expect = 6.060e-64 Identity = 129/310 (41.61%), Postives = 170/310 (54.84%), Query Frame = 1
Query: 175 SCANESYMSFTVVSINEVWEMVALALSCEKKEGPTKGEDMAEAIEVMVNNHGLKGHVVVGNTDCEPSMVKAGRLLTERNVFKHIGCACHRLECTTALVFNGPGVKKTMVLARALVTRYTKSTQMATRLEDMCRTINVVSLRVIQDVEMRWWSTLSMTGRLVYLRRAIELHETVDGNPSLLEPVGWRVLELLHPVLEPFSLVQKKLESER-VTVSLVVPLIADLRGSLQMEIEELEEFSA-AHAIGSKARDALLPCVEAL-----------------------------REQVMATALDARTKMLYGVPPT 1011
S +N++YM+FT I+ +++VAL L +K G T GED+ EA++ M+ +GL G V TDCEP MVKAGRLL E H+GC CHR E T+ F GPGV K + L R +VTRYT S+Q + RLE MC + V +V+QDVE RWWST +D P LL W VL+L+ P+L PF QK LE+ + VTVSLV IADLR L IE L+ +S A +I ++A+ +L C AL ++QV+ATALD R+K LYG+ T
Sbjct: 3 SASNDTYMTFTCTYISSNFDLVALCLEYKKHGGRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEGVSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDIVQVERKKVVQDVETRWWST----------------PREIDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADLRDELDEAIERLQAYSCPAESIVAEAKKDILRCAPALQTDLSRRWRDGTDVLVYTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEET 296
BLAST of mRNA_S-dermatodea_contig1042.306.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE) HSP 1 Score: 187 bits (474), Expect = 8.380e-48 Identity = 128/357 (35.85%), Postives = 172/357 (48.18%), Query Frame = 1
Query: 28 MVHMLNAKGQVPTHRIVVSRMREIRAGVAATIGDVLKDQWVSITTDGWASCANESYMSFTVVSINEVWEMVALALSCEKKEGPTKGEDMAEAIEVMVNNHGLKGHVVVGNTDCEPSMVKAGRLLT-ERNVFKHIGCACHRLECTTALVFNGPGVKKTMVLARALVTRYTKSTQMATRLEDMCRT-INVVSLRVIQDVEMRWWSTLSMTGRLVYLRRAIELHETVDGNPSLLEPVGWRVLELLHPVLEPFSLVQKKLESERVTVSLVVPLIADLRGSLQMEIEELEEFSA-AHAIGSKARDALLPCVEALREQ-----------------------------VMATALDARTKMLYGV 1002
MVH + +VP + V+ MR ++ + + +++ + V IT+DGW SCAN++YMS T I W++V L++ C K EG T G+ +A I+ V HGL G V TDCEPSMVK GRLL + V IGC +RLE T+++VFNGP VKK MVLAR LVTRY S+Q A RL+ +T + V + RVIQDV VT SLVVP I DLR SL+ I++L E + A + A A++PC++ALR+ V+ATALD RTK+ YGV
Sbjct: 1 MVHAIRPSARVPEKKDCVTTMRTVKKCMMEKVSRLIEGEQVCITSDGWTSCANDTYMSLTFTLITSAWKLVTLSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGRLLAGDATVSTQIGCCNYRLESTSSIVFNGPRVKKVMVLARGLVTRYPTSSQAADRLKQFVKTYLGVDNKRVIQDV---------------------------------------------------------------VTGSLVVPFIYDLRNSLEDAIDDLVELPPDSDANVNTAWAAVMPCIKALRDDYIDRWGDGHNILIYKEGPRRQPGGFKPVHVLATALDPRTKIPYGV 294
BLAST of mRNA_S-dermatodea_contig1042.306.1 vs. uniprot
Match: UPI0006234F41 (zinc finger BED domain-containing protein 4-like n=1 Tax=Linepithema humile TaxID=83485 RepID=UPI0006234F41) HSP 1 Score: 124 bits (310), Expect = 1.640e-26 Identity = 122/482 (25.31%), Postives = 222/482 (46.06%), Query Frame = 1
Query: 151 SITTDGWA-SCANESYMSFTVVSINEVWEMVALALSCEKKEGPTKGEDMAEAIEVMVNNHGL--KGHVVVGNTDCEPSMVKAGRLLTERNVFKHIGCACHRLECT-TALVFNGPGVKKTMVLARALVTRYTKSTQMATRLEDMCRTINVVSLRVIQDVEMRWWSTLSMTGRLVYLRRAIELHETVDGNPSLLEPVGWRVLELLHPVLEPFSLVQKKLESERVTVSLVVPLIADLRGSLQMEIEELEEFSAAHAIGSKARDALLPCVEALREQVM-------ATALDARTKMLYGVPPTSTRAFGRRLRRRPRTSKQRRRHVLRWHHPRQLLGQPLLLALEQLGSR-----VGPGHLPVLLAKE-------------DSAKASCKLLRRRLRQRPQHAPRRLCRRITSCVRQRMMDQSSSPSPLVWWRENARKLPLLAALAWRLLAIPASQAQSERVFSSAGHIVTKTRNKLASENVELLVGL 1509
+ T+D W + +NESY+SFT+ INE +++ AL+ + G GE++A+ I M+ L K ++++ D ++ KA + L +N C H L+ T + + V + ++R +VT + S +L+ + R +N+ +L+++QDV+ RW ST M RL L+RAI + L W +LE +L+PF + K++ S +S V+P++A L+ L EI + +G+ +D+L+ V ++ AT LD R K + S++ + +H +++ + +L + L + + L KE D++ ++C + + C I + + +++++ SP +WW +N + LP+L+ LA + L IPA+ SER+FS AG + K RN+L +N E L+ L
Sbjct: 161 AFTSDIWTCNISNESYISFTIHYINEDFQLKHAALNVKHFPGSHTGENIAKIITEMIEEWHLNDKNYIII--RDSGANIKKATKNLDIQNE----SCFIHTLQLVVTEALKSQRTVNDLIAVSRKIVTHFNHSPAACYKLKAIQRELNMPTLKLVQDVQTRWNSTFYMLQRLFELKRAISIFTIETEAIVNLSSHQWSLLENCLKLLQPFEEITKEISSSESIISEVIPIVASLKKYLLKEI-------SFFGVGTM-KDSLIQNVNNRFNNILLNINYTHATFLDPRFKTAFFDNDMSSKI-----------------KIEIYHKMQEISQEHEILESDDLNNSESNNDIDDESLTTFRRKETIWTCFSEIANASDASTSACGNAISNRNSSNTESNTKSCE-IDTYLSMKLIERIESP--FLWWHDNRKILPILSKLAEKYLCIPANSVYSERLFSKAGIVYEKKRNRLLPDNGEKLIFL 608
BLAST of mRNA_S-dermatodea_contig1042.306.1 vs. uniprot
Match: A0A6P6PQ46_CARAU (zinc finger BED domain-containing protein 1-like n=4 Tax=Clupeocephala TaxID=186625 RepID=A0A6P6PQ46_CARAU) HSP 1 Score: 120 bits (301), Expect = 2.450e-25 Identity = 132/541 (24.40%), Postives = 233/541 (43.07%), Query Frame = 1
Query: 1 VVDSKFFKDMVHMLNAKGQVP--TH--RIVVSRMREIRAGVAATIGDVLKDQWVSITTDGWASCANESYMSFTVVSINEVWEMVALALSCEKKEGPTKGEDMAEAIEVMVNNHGLKGHVVVGNT-DCEPSMVKAGRLLTERNVFKHIGCACHRLECTTALVFNGPGVKKTMVLARALVTRYTKSTQMATRLEDMCRTINVVSLRVIQDVEMRWWSTLSMTGRLVYLRRAI-----ELHETVDGNPSL-LEPVGWRVLELLHPVLEPFSLVQKKLESER-VTVSLVVPLIADLRGSLQMEIEELEEFSAAHAIGSKARDALLPCVEALREQ---------------VMATALDARTKMLYG-VPPTSTRAFGRRLRRRPRTSKQRRRHVLRWHHPRQLL----------GQPLLLALEQLGSRVGPGHLPVLLAKEDSAKASCKLLRRRLRQRPQHAPRRLCRRITSCVRQRMMDQSSSPSPLVWWRENARKLPLLAALAWRLLAIPASQAQSERVFSSAGHIVTKTRNKLASENVELLVGL 1509
+V+ F M+H LN +P TH +++ + E V I + +++TTD W S A E+Y+ T I + W+M + L+ ++AE +E V + ++ D ++V A +L E++ + + C H L+ P ++K + AR LV + KS +++L + + + ++QD+ RW ST M RL+ R + + T G L L+P W +LE L VL+PF V + ++ T+S + PL+ L S Q I E A L V+ L+E+ + A ALD R + L + P +L+ ++RR+ ++ H ++ PL+ L + S +G +E+ + + ++R + + ++ +D+ +P L+WW+ N + P+LA LA L IPA+ SER+FS+AG+I +K R L+ E+V++L L
Sbjct: 109 MVEDDGFTKMIHTLNPGYTLPSRTHFTKLMERKYEETFKEVKTAINT--NNSKLALTTDVWTSVATEAYLGITCHYITDDWDMQSFCLTTMPLHDRHTASNIAEWLEQAVARFEIPPSKIIAIVHDNGANIVAAANILEEKHGWSSVRCTGHTLQLVINTALKHPSIEKAVGAARCLVEHFKKSELASSKLREKQQQMATPEHSLVQDISTRWNSTFYMISRLLEQRWPVTATLSDSSVTQRGKRYLDLKPDQWSLLEELSTVLKPFECVTVFMSGQKYATISAIPPLVKGLLKSTQSAIYESAPLRAFQ----------LTAVQQLQERWKRETAFSDGAPNTVIFAMALDPRFRKLSKFLSPDEILLVQTKLQ--TMLLEERRKMDVQQHGSDSVVITSTNTTANESTPLVATL--IDSLLGSD------GEEEDRAGEAEDVHSQVRN-----------EVLTYFGEKSLDKEENP--LLWWKANNERYPMLARLAKFYLCIPATSTPSERLFSAAGNIASKKRASLSQEHVDMLTFL 614
BLAST of mRNA_S-dermatodea_contig1042.306.1 vs. uniprot
Match: A0A6G0HIV0_LARCR (Zinc finger BED domain-containing protein 4 n=1 Tax=Larimichthys crocea TaxID=215358 RepID=A0A6G0HIV0_LARCR) HSP 1 Score: 119 bits (299), Expect = 4.490e-25 Identity = 149/537 (27.75%), Postives = 235/537 (43.76%), Query Frame = 1
Query: 1 VVDSKFFKDMVHMLNAKGQVPTHRIVVSR--MREIRAGVAATIGDVLKD-QWVSITTDGWASCANESYMSFTVVSINEVWEMVALALSCEKKEGPTKGEDMAEAIEVMVNNHGLK--GHVVVGNTDCEPSMVKAGRLLTERNVFKHIGCACHRLECTTALVFNGPGVKKTMVLARALVTRYTKSTQMATRLEDMCRTINVVSLRVIQDVEMRWWSTLSMTGRLVYLRRAIEL--------HETVDGNPSLLEPVGWRVLELLHPVLEPFSLVQKKLESERV-TVSLVVPLIADLRGSLQMEIEELEEFSAAHAIGSKARDALLPCVEALREQ------VMATALDARTKMLYGVPPTSTRAFGRRLRRRPRTSKQRRRHVLRWHHPRQLLGQPLLLALEQLGSRVGPGHLPV----------LLAKEDSAKASC--KLLRRRLRQRP-QHAPRRLCRRITSCVRQRMMDQSSSPSPLVWWRENARKLPLLAALAWRLLAIPASQAQSERVFSSAGHIVTKTRNKLASENVELLVGLK 1512
VV+++ F+ ++H L K +P+ R+ SR + ++ AT+ LK+ + ++ITTDGW+S + Y++ T IN WEM ++AL G ++AE + V L+ H + TD +M A R E + HI C H + T + + + R + + +ST A L + + + ++I DV RW S+L M R + + AI H D + L+ RV E L +L+P L E+ TVSL+VPL + +Q + E+ S A A + A+L + + + TALD R + L + A LR + L Q + E+ G+R G P L +E S+K + LL P + + + R I R+ + +S P L WWR+N + PLL+ LA L+IPA+ SERVFS+AG IVT R++L ENV++L+ LK
Sbjct: 123 VVENEGFRRLLHTLEPKYTIPS-RVHFSRTVLPKLYEESKATVVQTLKEAETIAITTDGWSSRNTQRYITVTAHVINNDWEMKSVALQTRPLFESHTGLNIAEVLTAAVTEWELQRANHGIAIVTDNAHNMDVAVR---EAGLELHIKCFAHTINLATQAGLRVVRISRLLGRVRRVAAFFHRSTTAAAVLTSKQKQLQLPPHKLIMDVITRWNSSLDMLERYLEQQEAIAASLASPQIKHNARDIDT--LDSSHIRVAEDLVKLLKPLKTATTVLCDEKTPTVSLIVPL----KSMIQQSMAPNEDDSTAIA---NTKSAILNNISGRYSEDVYHCLLECTALDPRFRALPQLDHGQREAV-----------------FLRVQDKAKQLEQNQITD-EETGARGAAGEDPTDKEQGAARAELQVEEPSSKRTALEDLLGDSFSAEPADQSIQGVEREIDMYKREASIPLTSCP--LKWWRDNRSQYPLLSQLAKAYLSIPATPVPSERVFSTAGDIVTAQRSQLLPENVDILIFLK 626
BLAST of mRNA_S-dermatodea_contig1042.306.1 vs. uniprot
Match: UPI00165BA612 (zinc finger BED domain-containing protein 1 isoform X1 n=1 Tax=Fundulus heteroclitus TaxID=8078 RepID=UPI00165BA612) HSP 1 Score: 120 bits (300), Expect = 5.130e-25 Identity = 121/522 (23.18%), Postives = 225/522 (43.10%), Query Frame = 1
Query: 1 VVDSKFFKDMVHMLNAKGQVP--THRIVVSRMREIRAGVAATIGDVLKDQWVSITTDGWASCANESYMSFTVVSINEVWEMVALALSCEKKEGPTKGEDMAEAIEVMVNNHGLKGHVVVGNT-DCEPSMVKAGRLLTERNVFKHIGCACHRLECTTALVFNGPGVKKTMVLARALVTRYTKSTQMATRLEDMCRTINVVSLRVIQDVEMRWWSTLSMTGRLVYLRRAI-----ELHETVDGNPSL-LEPVGWRVLELLHPVLEPFSLVQKKLESER-VTVSLVVPLIADLRGSLQMEIEELEEFSAAHAIGSKARDALLPCVEALREQVMATALDARTKMLYGVPPTSTRAFGRRLRRRPRTS----KQRRRHVLRWHHPRQLLGQPLLLALEQLGSRVGPGH--LPVLLA---KEDSAKASCKLLRRRLRQRPQHAPRRLCRRITSCVRQRMMDQSSSPSPLVWWRENARKLPLLAALAWRLLAIPASQAQSERVFSSAGHIVTKTRNKLASENVELLVGL 1509
+V+ + F M+H LN +P TH + + A + +++TTD W S A E+Y+ T I + W+M +++L+ + ++AE +E +V+ + ++ D ++V A +L E++ + + C H L+ P ++K + AR LV + K ++L + + +N ++QDV RW ST M RL+ R + + T G L L+P W +LE L VL+ F + ++ T+S + PL+ L S Q + E A + + T + A + + P + LR + + ++RR+ ++ H G + + + + P L LL +ED + + ++R + + + + ++ + + +PL+WW+ N + P+LA LA L IPA+ SER+FS+AG+I +K R L+ E+V++L L
Sbjct: 53 MVEDEGFTKMIHTLNPGYTLPSRTHFTKLMERKYEETFKKAKTAINTNNSKLALTTDVWTSVATEAYLGVTCHYITDDWDMQSISLTTMPLQDRHTASNIAEWLEQVVDRFEIPPSKIIAIVHDNGANIVAAANILEEKHGWSSVRCTGHTLQLVINAALKNPSIEKAVGAARCLVEHFKKGELACSKLREKQQQMNTPEHSLVQDVSTRWNSTFYMISRLLEQRWPVTATLSDSSVTQRGKRYLDLKPDQWSLLEELSTVLKAFECATVFMSGQKYATISTIPPLVKGLLKSTQSAVYESAPLRAFQLTAVQQLQERWKRETTFSDSAPNTVILAMVLVQFPKPWVKFLSPDEVLRVQTKVQTMVLEERRKMDVQQH------GSCSVTSTDTTATESTPQATLLDSLLGSDGEEDDRAGQAEDVHTQVR-----------KEVLTYLEEKSL--AKEENPLLWWKANNERYPMLARLAKSFLCIPATSTPSERLFSAAGNIASKKRASLSQEHVDMLTFL 555 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1042.306.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1042.306.1 >prot_S-dermatodea_contig1042.306.1 ID=prot_S-dermatodea_contig1042.306.1|Name=mRNA_S-dermatodea_contig1042.306.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=495bp MVHMLNAKGQVPTHRIVVSRMREIRAGVAATIGDVLKDQWVSITTDGWASback to top mRNA from alignment at S-dermatodea_contig1042:1320..2972- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig1042.306.1 ID=mRNA_S-dermatodea_contig1042.306.1|Name=mRNA_S-dermatodea_contig1042.306.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1653bp|location=Sequence derived from alignment at S-dermatodea_contig1042:1320..2972- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig1042:1320..2972- >mRNA_S-dermatodea_contig1042.306.1 ID=mRNA_S-dermatodea_contig1042.306.1|Name=mRNA_S-dermatodea_contig1042.306.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2970bp|location=Sequence derived from alignment at S-dermatodea_contig1042:1320..2972- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |