mRNA_S-dermatodea_contig10416.302.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig10416.302.1
Unique NamemRNA_S-dermatodea_contig10416.302.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig10416.302.1 vs. uniprot
Match: D7FJ42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ42_ECTSI)

HSP 1 Score: 289 bits (739), Expect = 1.660e-93
Identity = 247/298 (82.89%), Postives = 258/298 (86.58%), Query Frame = 1
Query:    1 QVCAISNERLREPVAACELGYLYSKDTLISGLLKRDLNPAFNHIRGLKDIVECRRVLAHILLTPNPAFEKEDRSFDGPEPARYMCPVTLQEMNGSHAFVLLLSTGWVMAEKATTEVGIAGLQEEYGPFAEGDIVRLAPTDEEREKMKRRLIAKREQARL-DKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVKKNKEDSSVYASLFGKKDVSNEHLFIATAGHRYNLG 891
            +VCAISNE LREPVAACELGYLY+KD LISGLL RDLNPAFNHIRGLKDIVEC+       LTPNP+FEKEDR+FDGPEPAR+MCPVTLQEMNGSHAFV+L+STGWVM+EKAT EVGIAGLQEEYGPF E DIV LAPTDEERE   R+LI KRE+ARL  KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  AVKKNKE S VYASLFGKKDVSNEHLFIATAGHRYNLG
Sbjct:   44 KVCAISNEVLREPVAACELGYLYNKDVLISGLLNRDLNPAFNHIRGLKDIVECK-------LTPNPSFEKEDRAFDGPEPARFMCPVTLQEMNGSHAFVVLMSTGWVMSEKATKEVGIAGLQEEYGPFTEDDIVGLAPTDEERETRTRQLITKREKARLAKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGASAGPNSARLAGAAAEAVKKNKEASKVYASLFGKKDVSNEHLFIATAGHRYNLG 334          
BLAST of mRNA_S-dermatodea_contig10416.302.1 vs. uniprot
Match: A0A836CNB3_9STRA (Rtf2 RING-finger-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNB3_9STRA)

HSP 1 Score: 156 bits (395), Expect = 2.630e-42
Identity = 74/154 (48.05%), Postives = 109/154 (70.78%), Query Frame = 1
Query:    1 QVCAISNERLREPVAACELGYLYSKDTLISGLLKRDLNPAFNHIRGLKDIVECRRVLAHILLTPNPAFEKEDRSFDGPEPARYMCPVTLQEMNGSHAFVLLLSTGWVMAEKATTEVGIAGLQEEYGPFAEGDIVRLAPTDEEREKMKRRLIAKR 462
            +VCA+SNERL+EP+  CELGYLY+KD ++S LL R L+P F H+RGLKD++E +       LT N A+++ D      E   YMCP+T QE  G + F ++ STGWV++++A  EVGI GLQ EYGPF + D++RLAP  +E++++++R+  +R
Sbjct:   42 KVCAVSNERLQEPIVVCELGYLYNKDAVLSALLDRTLDPTFAHLRGLKDLIEPK-------LTANRAYDESDS-----ESPPYMCPITFQEFTGRYPFSIIRSTGWVISDRAIAEVGIEGLQAEYGPFVQDDVMRLAPDKDEQQQLRQRMETRR 183          
BLAST of mRNA_S-dermatodea_contig10416.302.1 vs. uniprot
Match: A0A6V1S5E2_HETAK (Replication termination factor 2 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S5E2_HETAK)

HSP 1 Score: 149 bits (376), Expect = 2.970e-39
Identity = 77/147 (52.38%), Postives = 103/147 (70.07%), Query Frame = 1
Query:    1 QVCAISNERLREPVAACELGYLYSKDTLISGLLKRDLNPAFNHIRGLKDIVECRRVLAHILLTPNPAFEK----EDRSFDGPEPARYMCPVTLQEMNGSHAFVLLLSTGWVMAEKATTEVGIAGLQEEYGPFAEG-DIVRLAPTDEE 426
            + CAISNE L+EPV ACELG LY+K+ + + LL++ LN +F HIRGLKD+VE +       LTPNP++E+    +D       PA+Y+CPVTL EMNGS  FV++  TGWV++++A  EVG   LQ EYGPF  G D+VRLAP +E+
Sbjct:   39 KTCAISNEVLQEPVVACELGNLYNKEAIFTCLLEKTLNQSFQHIRGLKDLVEVK-------LTPNPSYEEKGAEDDIKLKSELPAKYICPVTLIEMNGSQPFVVVWPTGWVLSDRALREVGAPALQAEYGPFRPGEDVVRLAPPEED 178          
BLAST of mRNA_S-dermatodea_contig10416.302.1 vs. uniprot
Match: W7TG44_9STRA (Replication termination factor 2 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TG44_9STRA)

HSP 1 Score: 135 bits (340), Expect = 6.080e-34
Identity = 71/169 (42.01%), Postives = 98/169 (57.99%), Query Frame = 1
Query:    1 QVCAISNERLREPVAACELGYLYSKDTLISGLLKRDLNPAFNHIRGLKDIVECRRVLAHILLTPNPAFEKEDRSFDGPEPA---------------------------RYMCPVTLQEMNGSHAFVLLLSTGWVMAEKATTEVGIAGLQEEYGPFAEGDIVRLAPTDEE 426
            +VCA+S+ERLR+PV ACELG+LY+K+ ++  LL+  LNPAF HIRG+KD++ CR        T NP +  E  +    + A                           +Y+CPV   EMN    FV++ STGWV++E+A  EVG A LQ+EYGPF   D++RL P +EE
Sbjct:   41 RVCAVSSERLRDPVVACELGHLYNKEAVLLALLEHTLNPAFAHIRGMKDLIACR-------FTINPNWTDETAAQASAQEAWAANEAKGEGTNAGTMVGSFAEEGAVSKYICPVARVEMNAKQPFVVIRSTGWVLSERALKEVGAASLQDEYGPFDSDDLIRLVPDEEE 202          
BLAST of mRNA_S-dermatodea_contig10416.302.1 vs. uniprot
Match: A0A7S2RH24_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RH24_9STRA)

HSP 1 Score: 114 bits (286), Expect = 3.740e-26
Identity = 67/181 (37.02%), Postives = 104/181 (57.46%), Query Frame = 1
Query:    1 QVCAISNERLR--EPVAACELGYLYSKDTLISGLLKRDLNPAFNHIRGLKDIVECRRVLAHILLTPNPAFEKEDRSF-----------------DGPEPARYMCPVTLQEMNGSHAFVLLLSTGW---VMAEKATTEVGIAGLQEEYGPFAEGDIVRLAPTDEEREKMKRRLIAKREQARL 477
            + CA+SNE L+   PV A E+G L+SK+ ++  LL +++   F+HIRGL+D++ECR          NP++ +E +S                  D    + Y CPV   EMNG H FV+L  T     V++E+A  +VG   LQEEYGPF   D++++ P++EER ++  R+ A+RE+ R+
Sbjct:   43 RTCALSNEALQPGSPVVADEVGNLFSKEAVLKRLLDKNMPVEFSHIRGLRDVIECR-------FFANPSWSEEGKSSEAAGGTSSSGPGMQWSTDNDSLSPYSCPVASVEMNGRHPFVVLRGTTKPVNVLSERAIKQVGTDALQEEYGPFTGDDVIKVVPSEEERPQLVARMAARREEERI 216          
BLAST of mRNA_S-dermatodea_contig10416.302.1 vs. uniprot
Match: A0A8C4BZR0_9TELE (Replication termination factor 2 n=2 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C4BZR0_9TELE)

HSP 1 Score: 104 bits (259), Expect = 1.830e-22
Identity = 70/169 (41.42%), Postives = 95/169 (56.21%), Query Frame = 1
Query:    7 CAISNERLREPVAACELGYLYSKDTLISGLL----KRDLNPAFNHIRGLKDIVECRRVLAHILLTPNPAFE------KEDRSFDGPEPARYMCPVTLQEMNGSHAFVLLLSTGWVMAEKATTEVGIAGLQEEYGPFAEGDIVRLAPTDEEREKMKRRLIAKREQARLDK 483
            CA+S E+LR PV ACELG LY+KD +I  LL    +R      +HIRG+KD+ E         LT NPA+E      K DR ++    A ++CPV   EMNG H F  LL+ G V +E+A  EV      +   PF +GD+V L  T EE EK++ R+  +R +A+  K
Sbjct:   37 CALSQEKLRRPVVACELGRLYNKDAVIEYLLDKSAERPNTEVASHIRGIKDVKELN-------LTDNPAWEGDRMNTKGDR-YEDVHCAMFICPVVGLEMNGKHKFCFLLTCGCVFSERALKEVKTEICHKCGDPFQDGDLVFLNGTKEEVEKLRERMGERRVKAKAAK 197          
BLAST of mRNA_S-dermatodea_contig10416.302.1 vs. uniprot
Match: UPI001BF6D5BC (replication termination factor 2 n=2 Tax=Alosa TaxID=34772 RepID=UPI001BF6D5BC)

HSP 1 Score: 103 bits (257), Expect = 3.000e-22
Identity = 65/164 (39.63%), Postives = 92/164 (56.10%), Query Frame = 1
Query:    7 CAISNERLREPVAACELGYLYSKDTLISGLL----KRDLNPAFNHIRGLKDIVECRRVLAHILLTPNPAFEKEDRS----FDGPEPARYMCPVTLQEMNGSHAFVLLLSTGWVMAEKATTEVGIAGLQEEYGPFAEGDIVRLAPTDEEREKMKRRLIAKREQAR 474
            CA+S E+LR P+ AC+LG +Y+KD +I  LL    +R       HIRG+KD+ E         LT NPA++ E  +    ++    A ++CPV   EMNG H F  L + G V +E+A  EV      +   PF EGD+V L  T+EE EK+K R+  KR +A+
Sbjct:   37 CALSQEKLRRPIVACDLGRIYNKDAVIEYLLDKSAERPNTEVATHIRGIKDVKELN-------LTDNPAWDGESNTKGDRYEALHRAMFICPVVGLEMNGKHKFSFLQTCGCVFSERALKEVKTEICHKCGDPFQEGDLVVLNGTNEEVEKLKLRMEEKRAKAK 193          
BLAST of mRNA_S-dermatodea_contig10416.302.1 vs. uniprot
Match: W5K003_ASTMX (Replication termination factor 2 n=2 Tax=Astyanax mexicanus TaxID=7994 RepID=W5K003_ASTMX)

HSP 1 Score: 100 bits (249), Expect = 6.790e-22
Identity = 66/168 (39.29%), Postives = 91/168 (54.17%), Query Frame = 1
Query:    7 CAISNERLREPVAACELGYLYSKDTLISGLLKRDLN----PAFNHIRGLKDIVECRRVLAHILLTPNPAFEKEDRSFDGP-----EPARYMCPVTLQEMNGSHAFVLLLSTGWVMAEKATTEVGIAGLQEEYGPFAEGDIVRLAPTDEEREKMKRRLIAKREQARLDK 483
            CA+S E+LR P+ ACELG LY+KD +I  LL +           HIRG+KD+ E         LT NPA+E E R+  G        A ++CPV   EMNG H F  L + G V +++A  EV      +   PF E DIV L  T EE+EK+++ +  +R +A+  K
Sbjct:   37 CALSQEKLRRPIVACELGKLYNKDAVIEYLLDKSAERPNIEVAAHIRGIKDVKELN-------LTENPAWEGERRNTKGDCYEDMHCAMFICPVVGLEMNGKHKFCFLHTCGCVFSDRALREVKTEICHKCGDPFQEDDIVVLNGTKEEQEKLQKTMEERRAKAKTGK 197          
BLAST of mRNA_S-dermatodea_contig10416.302.1 vs. uniprot
Match: A0A8J4U425_CLAMG (Replication termination factor 2 n=1 Tax=Clarias magur TaxID=1594786 RepID=A0A8J4U425_CLAMG)

HSP 1 Score: 100 bits (249), Expect = 9.210e-22
Identity = 65/165 (39.39%), Postives = 91/165 (55.15%), Query Frame = 1
Query:    7 CAISNERLREPVAACELGYLYSKDTLISGLL----KRDLNPAFNHIRGLKDIVECRRVLAHILLTPNPAFEKEDRSFDGP-----EPARYMCPVTLQEMNGSHAFVLLLSTGWVMAEKATTEVGIAGLQEEYGPFAEGDIVRLAPTDEEREKMKRRLIAKREQAR 474
            C++S E+LR P+ ACELG +Y+KD +I  LL    +R       HIRG+KD+ E         LT NPA+E E R+  G        A ++CPV   EMNG H F  LL+ G V +E+A  EV      +   PF E DIV L    EE+EK+++ +  +R +A+
Sbjct:   37 CSLSQEKLRRPIVACELGRVYNKDAIIEYLLDKSAERPNTEVVAHIRGIKDVKELN-------LTDNPAWEGERRNAKGDCYEDMHCAMFICPVVGLEMNGKHKFCYLLTCGCVFSERALKEVKTEICHKCGDPFQEDDIVMLNCNREEQEKLQKAMEERRAKAK 194          
BLAST of mRNA_S-dermatodea_contig10416.302.1 vs. uniprot
Match: UPI001458FAFF (replication termination factor 2-like isoform X1 n=2 Tax=Pecten maximus TaxID=6579 RepID=UPI001458FAFF)

HSP 1 Score: 102 bits (254), Expect = 1.190e-21
Identity = 67/166 (40.36%), Postives = 99/166 (59.64%), Query Frame = 1
Query:    7 CAISNERLREPVAACELGYLYSKDTLISGLLKR---DLNPAFNHIRGLKDIVECRRVLAHILLTPNPAFEK-EDRSFDG---PEPARYMCPVTLQEMNGSHAFVLLLSTGWVMAEKATTEVGIAGLQEEYGPFAEGDIVRLAPTDEEREKMKRRLIAKREQARLDK 483
            CAI+ E LR+P+ ACELG LY+K+ ++  LL R   +   +F+H+RG KD+ E         LT NPA+EK ++   DG      A Y+CPV   EMNG H F +L   G V++++A  EV      +   PF+  DIV L  T+EE +++ +R+ A+R QA+L+K
Sbjct:   37 CAITQEPLRQPIMACELGKLYNKECVLELLLDRTKFECASSFSHLRGFKDLKELN-------LTENPAYEKPKNEKGDGYIDTNIAPYICPVVGIEMNGKHRFSVLWKCGCVLSDRANKEVKGQICHKCGAPFSPEDIVILNGTEEEVDELYKRMEARRLQAKLEK 195          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10416.302.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJ42_ECTSI1.660e-9382.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CNB3_9STRA2.630e-4248.05Rtf2 RING-finger-domain-containing protein n=1 Tax... [more]
A0A6V1S5E2_HETAK2.970e-3952.38Replication termination factor 2 n=1 Tax=Heterosig... [more]
W7TG44_9STRA6.080e-3442.01Replication termination factor 2 n=3 Tax=Monodopsi... [more]
A0A7S2RH24_9STRA3.740e-2637.02Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8C4BZR0_9TELE1.830e-2241.42Replication termination factor 2 n=2 Tax=Denticeps... [more]
UPI001BF6D5BC3.000e-2239.63replication termination factor 2 n=2 Tax=Alosa Tax... [more]
W5K003_ASTMX6.790e-2239.29Replication termination factor 2 n=2 Tax=Astyanax ... [more]
A0A8J4U425_CLAMG9.210e-2239.39Replication termination factor 2 n=1 Tax=Clarias m... [more]
UPI001458FAFF1.190e-2140.36replication termination factor 2-like isoform X1 n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10416contigS-dermatodea_contig10416:1388..3510 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score290.0
Seed ortholog evalue1.2e-75
Seed eggNOG ortholog2880.D7FJ42
Preferred nameRTFDC1
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006274,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010453,GO:0019222,GO:0031494,GO:0034641,GO:0034645,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045595,GO:0046483,GO:0050789,GO:0050793,GO:0050794,GO:0060255,GO:0065007,GO:0071170,GO:0071171,GO:0071514,GO:0071515,GO:0071516,GO:0071704,GO:0090304,GO:1901360,GO:1901576,GO:2000241
EggNOG free text desc.nuclear DNA replication termination
EggNOG OGsKOG3113@1,KOG3113@2759
COG Functional cat.N
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein of unknown function DUF602
Ec32 orthologEc-10_000050.1
Exons4
Model size894
Cds size894
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10416.302.1prot_S-dermatodea_contig10416.302.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig10416 1388..3510 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924156.631955-CDS-S-dermatodea_contig10416:1387..19151622924156.631955-CDS-S-dermatodea_contig10416:1387..1915Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10416 1388..1915 -
1694079056.3797038-CDS-S-dermatodea_contig10416:1387..19151694079056.3797038-CDS-S-dermatodea_contig10416:1387..1915Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10416 1388..1915 -
1622924156.6423438-CDS-S-dermatodea_contig10416:2206..23901622924156.6423438-CDS-S-dermatodea_contig10416:2206..2390Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10416 2207..2390 -
1694079056.3944423-CDS-S-dermatodea_contig10416:2206..23901694079056.3944423-CDS-S-dermatodea_contig10416:2206..2390Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10416 2207..2390 -
1622924156.6506467-CDS-S-dermatodea_contig10416:2786..28931622924156.6506467-CDS-S-dermatodea_contig10416:2786..2893Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10416 2787..2893 -
1694079056.4111774-CDS-S-dermatodea_contig10416:2786..28931694079056.4111774-CDS-S-dermatodea_contig10416:2786..2893Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10416 2787..2893 -
1622924156.6617253-CDS-S-dermatodea_contig10416:3435..35101622924156.6617253-CDS-S-dermatodea_contig10416:3435..3510Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10416 3436..3510 -
1694079056.423616-CDS-S-dermatodea_contig10416:3435..35101694079056.423616-CDS-S-dermatodea_contig10416:3435..3510Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10416 3436..3510 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig10416.302.1

>prot_S-dermatodea_contig10416.302.1 ID=prot_S-dermatodea_contig10416.302.1|Name=mRNA_S-dermatodea_contig10416.302.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=298bp
QVCAISNERLREPVAACELGYLYSKDTLISGLLKRDLNPAFNHIRGLKDI
VECRRVLAHILLTPNPAFEKEDRSFDGPEPARYMCPVTLQEMNGSHAFVL
LLSTGWVMAEKATTEVGIAGLQEEYGPFAEGDIVRLAPTDEEREKMKRRL
IAKREQARLDKKSSKRSARREKKASSLGASSSCSSSTPAAPSSKDDGKAG
EAGGGSRPGDEAANDATFERKKSKRRRRAERDEVAAAVVAGGGPSAGPSS
SRVAGAAAEAVKKNKEDSSVYASLFGKKDVSNEHLFIATAGHRYNLG*
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mRNA from alignment at S-dermatodea_contig10416:1388..3510-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig10416.302.1 ID=mRNA_S-dermatodea_contig10416.302.1|Name=mRNA_S-dermatodea_contig10416.302.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2123bp|location=Sequence derived from alignment at S-dermatodea_contig10416:1388..3510- (Saccorhiza dermatodea SderLu1190fm monoicous)
CAGGTATGTGCAATAAGCAACGAACGCCTCCGAGAGCCCGTAGCTGCGTG TGAGCTGGGATACCTCTACAGCAAGGTGAGGAACTCGCGCTATACCCCTG TACTGTAGAGCTACGCGGATAGGTCGGCTCGGGGCAGTTGTTCGTGCAGG TGGTGGTATGGCGCTTCGCTCGCCGGGTCTCCCTCAGCCGCAAAACTAGA CTTGGAGTGCCGCTGTAACCTCGTCCAGTGGTTTGAGTATCACTGCGAGC GTGGACATGCGCGAACTCCACCCACCGACTTCCCGTATGCTTCTCAGTAA CGAAGCTGCACTTTATGCTCTTAATTAAAGTAGTTCCAGTTTGAGACGCG TCTGGGTTTTTAACGACGTACTTTTCGTCTCCTCTGGTTTGATTGTTCTT GCTATGTTATAAATGTCGACAACAATCACAACAACCATCGGTACTGCAGC AGTTCCTATTTACCAAATGTTTTAGTTTGTTTTGCGAATGTTTCCACTTA TGTTGTATCGAGTGTTCCGTTTCGTTTATCTCGATTTCTCTAGTCTTGTG ACCACGGCTGGATTTTGAGACGTCATAAATACCCACTGTTGCTGTGCGAA TCGTTGCCGTGTTCCAGGACACGCTAATCTCCGGGCTGCTCAAGCGCGAC CTTAACCCCGCGTTCAACCACATTCGCGGACTGAAGGACATCGTCGAGTG CAGGCGAGTTTTGGCGCACATATTGTTTTTTGCATTCGTCGTGTTTCTGC CGCATAAGCGTGGAAGGGGTGTTTGAACCCGTGGCGATGGTGCGATGGCC TACAGCAGCCGTTTTACGGTAGCGGGCATCTGCCAGTAGTCCCATAATAC GCCTGCTGGCCCGTCTTGGTGGCGAACACTATTCCTCCAGCCCTTGGTAT ATTCGACGCTGAAATGTGCCGAGGGATTTTCGTGTGATAGGCCGCGGTTG GACCACTTCTTGCTAGCGCCGCAGCAGCAGCAGGAAAGAGAAAACGTACA ACTTGGCGTTTTCCCCGTACCGATGCATTCGTGCACGTCGCCGCACCCGT TCTCTAATGCACTCTCCGTGTCTACTGCTCGTGTGCACGTGATTTCGAAA CATCCTTGGCCGTTCTACAGGCTGACCCCTAACCCGGCATTCGAGAAGGA AGACAGGTCGTTTGATGGACCGGAGCCAGCCCGCTACATGTGCCCCGTTA CCCTGCAGGAGATGAACGGCTCGCACGCCTTCGTGTTGCTGTTGAGTACG GGATGGGTCATGGCGGAGAAGGCCACGACAGAGGTCGGCATCGCCGGTTT GCAGGTGAGCAGACGCGCCTGCCGCCTAGAGGGGAGCGGGGCCTATATGG GTAGTTGTCGCCTCTGACTTTTGGACACGAATTATATTTTCCTTGTGAAA GGTGGTCATGTGTCTACGCGCTACGTACGCATTACTGCTGGACGTTGACG CTCCCTCGACAAGACAAATAGAAAATAGCCACCTCCTGCCCTGTCGTTAC TTTACTTCCAATCGCCTACATATCTTGTGTGTGATGCATGATCTTAACAC GATCCCAATACCACCTACTCTGGTCTGTCCACAATCGACCGACAGGAGGA GTACGGCCCATTCGCCGAGGGAGACATAGTCCGGCTAGCCCCGACGGACG AAGAGCGCGAGAAGATGAAGCGGCGGCTCATCGCCAAGCGGGAGCAGGCG CGCCTCGACAAAAAATCCTCCAAGAGAAGCGCAAGACGAGAGAAAAAGGC CTCCTCTCTGGGCGCCTCTTCCTCCTGCTCCTCCTCCACACCCGCCGCAC CATCTAGCAAGGACGACGGCAAGGCTGGAGAGGCCGGGGGCGGGTCTAGG CCTGGCGATGAGGCGGCAAACGATGCCACCTTTGAGCGCAAGAAGAGCAA GAGAAGGAGACGCGCTGAGCGGGATGAGGTGGCGGCGGCGGTGGTTGCGG GGGGCGGTCCTAGCGCGGGGCCGAGCTCGTCGAGGGTCGCCGGGGCGGCA GCCGAGGCCGTGAAAAAGAACAAGGAGGACAGCAGCGTTTACGCGTCGCT GTTCGGGAAGAAGGATGTGTCGAACGAGCATCTCTTTATCGCAACCGCTG GCCACCGGTACAATCTGGGTTAG
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Coding sequence (CDS) from alignment at S-dermatodea_contig10416:1388..3510-

>mRNA_S-dermatodea_contig10416.302.1 ID=mRNA_S-dermatodea_contig10416.302.1|Name=mRNA_S-dermatodea_contig10416.302.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1788bp|location=Sequence derived from alignment at S-dermatodea_contig10416:1388..3510- (Saccorhiza dermatodea SderLu1190fm monoicous)
CAGGTATGTGCAATAAGCAACGAACGCCTCCGAGAGCCCGTAGCTGCGTG
TGAGCTGGGATACCTCTACAGCAAGCAGGTATGTGCAATAAGCAACGAAC
GCCTCCGAGAGCCCGTAGCTGCGTGTGAGCTGGGATACCTCTACAGCAAG
GACACGCTAATCTCCGGGCTGCTCAAGCGCGACCTTAACCCCGCGTTCAA
CCACATTCGCGGACTGAAGGACATCGTCGAGTGCAGGCGAGTTTTGGCGC
ACATATTGACACGCTAATCTCCGGGCTGCTCAAGCGCGACCTTAACCCCG
CGTTCAACCACATTCGCGGACTGAAGGACATCGTCGAGTGCAGGCGAGTT
TTGGCGCACATATTGCTGACCCCTAACCCGGCATTCGAGAAGGAAGACAG
GTCGTTTGATGGACCGGAGCCAGCCCGCTACATGTGCCCCGTTACCCTGC
AGGAGATGAACGGCTCGCACGCCTTCGTGTTGCTGTTGAGTACGGGATGG
GTCATGGCGGAGAAGGCCACGACAGAGGTCGGCATCGCCGGTTTGCAGGC
TGACCCCTAACCCGGCATTCGAGAAGGAAGACAGGTCGTTTGATGGACCG
GAGCCAGCCCGCTACATGTGCCCCGTTACCCTGCAGGAGATGAACGGCTC
GCACGCCTTCGTGTTGCTGTTGAGTACGGGATGGGTCATGGCGGAGAAGG
CCACGACAGAGGTCGGCATCGCCGGTTTGCAGGAGGAGTACGGCCCATTC
GCCGAGGGAGACATAGTCCGGCTAGCCCCGACGGACGAAGAGCGCGAGAA
GATGAAGCGGCGGCTCATCGCCAAGCGGGAGCAGGCGCGCCTCGACAAAA
AATCCTCCAAGAGAAGCGCAAGACGAGAGAAAAAGGCCTCCTCTCTGGGC
GCCTCTTCCTCCTGCTCCTCCTCCACACCCGCCGCACCATCTAGCAAGGA
CGACGGCAAGGCTGGAGAGGCCGGGGGCGGGTCTAGGCCTGGCGATGAGG
CGGCAAACGATGCCACCTTTGAGCGCAAGAAGAGCAAGAGAAGGAGACGC
GCTGAGCGGGATGAGGTGGCGGCGGCGGTGGTTGCGGGGGGCGGTCCTAG
CGCGGGGCCGAGCTCGTCGAGGGTCGCCGGGGCGGCAGCCGAGGCCGTGA
AAAAGAACAAGGAGGACAGCAGCGTTTACGCGTCGCTGTTCGGGAAGAAG
GATGTGTCGAACGAGCATCTCTTTATCGCAACCGCTGGCCACCGGTACAA
TCTGGGTTAGGAGGAGTACGGCCCATTCGCCGAGGGAGACATAGTCCGGC
TAGCCCCGACGGACGAAGAGCGCGAGAAGATGAAGCGGCGGCTCATCGCC
AAGCGGGAGCAGGCGCGCCTCGACAAAAAATCCTCCAAGAGAAGCGCAAG
ACGAGAGAAAAAGGCCTCCTCTCTGGGCGCCTCTTCCTCCTGCTCCTCCT
CCACACCCGCCGCACCATCTAGCAAGGACGACGGCAAGGCTGGAGAGGCC
GGGGGCGGGTCTAGGCCTGGCGATGAGGCGGCAAACGATGCCACCTTTGA
GCGCAAGAAGAGCAAGAGAAGGAGACGCGCTGAGCGGGATGAGGTGGCGG
CGGCGGTGGTTGCGGGGGGCGGTCCTAGCGCGGGGCCGAGCTCGTCGAGG
GTCGCCGGGGCGGCAGCCGAGGCCGTGAAAAAGAACAAGGAGGACAGCAG
CGTTTACGCGTCGCTGTTCGGGAAGAAGGATGTGTCGAACGAGCATCTCT
TTATCGCAACCGCTGGCCACCGGTACAATCTGGGTTAG
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