mRNA_S-dermatodea_contig10404.296.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10404.296.1 vs. uniprot
Match: D7FPP9_ECTSI (Alanine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPP9_ECTSI) HSP 1 Score: 323 bits (827), Expect = 5.640e-101 Identity = 176/215 (81.86%), Postives = 188/215 (87.44%), Query Frame = 1
Query: 1 QVGIAKGVRRIVAVTRGLAQGARERAAAFEQQLEAADAINDLALDITVRRLGAELDTSVFSLKAKNKFRARLAKLVQKAKTIKKKVMEERVGQAVNSGKAEAEKMKEAGENKLVFRADFGCDAKSAAKILAEVSKACPHLASLMLFTADEEADRWLCCGLIPNSKAAKKDANKWVQAALDASGKGGKGGGKGDRAQGISQGVDTLDKAMEAARDP 645
+ GIAKGVRRIVAVTRGLA A ERA AFEQQL+ AD I D++LD TVRRLGAELD +V S+K KNK RARLA LVQKAK +KKKVMEERVGQAV GKAEAEK KEAG +LVFRADFGCDAKSA KILAEVSKACP L S+MLFTADEEADR+LCCGLIPNSKAAKKD NKWVQ ALDASG+GGKGGGKGDRAQGISQGVDT+DKAME AR P
Sbjct: 777 EAGIAKGVRRIVAVTRGLALAAVERAKAFEQQLDVADGIEDISLDTTVRRLGAELDGAVISVKTKNKLRARLATLVQKAKALKKKVMEERVGQAVTVGKAEAEKTKEAGGTQLVFRADFGCDAKSAVKILAEVSKACPELTSMMLFTADEEADRYLCCGLIPNSKAAKKDTNKWVQCALDASGRGGKGGGKGDRAQGISQGVDTIDKAMEVARGP 991
BLAST of mRNA_S-dermatodea_contig10404.296.1 vs. uniprot
Match: A0A6H5L0C8_9PHAE (Alanine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0C8_9PHAE) HSP 1 Score: 193 bits (491), Expect = 5.860e-54 Identity = 111/142 (78.17%), Postives = 120/142 (84.51%), Query Frame = 1
Query: 1 QVGIAKGVRRIVAVTRGLAQGARERAAAFEQQLEAADAINDLALDITVRRLGAELDTSVFSLKAKNKFRARLAKLVQKAKTIKKKVMEERVGQAVNSGKAEAEKMKEAGENKLVFRADFGCDAKSAAKILAEVSKACPHLAS 426
+ GIAKGVRRIVAVTRGLA A ERA AFEQQL+ AD I D++LD VRRLGAELD +V S+KAKNK RARLA LVQKAK +KKKVMEERVGQAV +GKAEAEK KEAG +LVFRADFGCDAKSA KILAEVSKACP L S
Sbjct: 610 EAGIAKGVRRIVAVTRGLALAAVERAKAFEQQLDVADGIEDISLDTKVRRLGAELDGAVISVKAKNKLRARLATLVQKAKALKKKVMEERVGQAVTAGKAEAEKTKEAGGTQLVFRADFGCDAKSAVKILAEVSKACPELVS 751
BLAST of mRNA_S-dermatodea_contig10404.296.1 vs. uniprot
Match: A0A6V2XN65_HETAK (Alanine--tRNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2XN65_HETAK) HSP 1 Score: 138 bits (347), Expect = 6.560e-34 Identity = 90/210 (42.86%), Postives = 124/210 (59.05%), Query Frame = 1
Query: 7 GIAKGVRRIVAVTRGLAQGARERAAAFEQQLEAADAINDLALDITVRRLGAELDTSVFSLKAKNKFRARLAKLVQKAKTIKKKVMEERVGQAVNSGKAEAEKMKEAGENKLVFRADFGCDAKSAAKILAEVSKACPHLASLMLFTADEEADRWLCCGLIPNSKAAKKDANKWVQAALDASGKGGKGGGKGDRAQGISQGVDTLDKAMEAA 636
GIAKG+RR++AVTRG A+ AR+R+ AFE +L+AA + AL + L L+ S+ KN+ R L L K K KKK ++ G A+ + +A++ +EAG K+V R DFGCD K K + E+ K P M+ +ADE+ADR+ C +IP +K DAN W+ AA+DA+G GGK GGK D A G G +D A AA
Sbjct: 772 GIAKGIRRVIAVTRGAAEEARDRSRAFEAELKAAAELEGEALLEACKGLTQALNPLAISVVDKNRLREELGALATKVKAWKKKQLKAMSGMALGLCEEKAKEAREAGARKVVLRVDFGCDGKVGKKCVQEMHKHHPE-GVFMVLSADEDADRFQCYAMIPGAKEKGLDANAWLAAAMDAAG-GGKSGGKPDNAMGTVNGCSGIDAAAAAA 979
BLAST of mRNA_S-dermatodea_contig10404.296.1 vs. uniprot
Match: A0A7S2V5N9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5N9_9STRA) HSP 1 Score: 127 bits (319), Expect = 1.020e-30 Identity = 89/211 (42.18%), Postives = 123/211 (58.29%), Query Frame = 1
Query: 7 GIAKGVRRIVAVTRGLAQGARERAAAFEQQLEAADAINDLALDITVRRLGAELDTSVFSLKAKNKFRARLAKLVQKAKTIKKKVMEERVGQAVNSGKAEAEKMKEAGENKLVFRADFGCDAKSAAKILAEVSKACPHLASLMLFTADEEADRWLCCGLIPNSKAAKKDANKWVQAALDASGKGGKGGGKGDRAQGISQGVDTLDKAMEAAR 639
GIAKG+RR++ VTR A A+E + AF++++ AD + ALD R L EL+ S+ K RA+L V++ K KKK QA+ + A A + KE G+N +V R DFGC+ K K L E K P ASLML +AD E DR+ ++P + DA +WV+AALDA+G GGKG K D A G + GV ++ A+EAA+
Sbjct: 291 GIAKGIRRVIGVTREAAVAAKEASEAFKKKITEADKLEGQALDEAWRALTQELNQLQISIVDKAGHRAQLDAQVERIKKWKKKAAAGSATQAIGAVNALASEAKEKGQNVVVARLDFGCNGKVGKKALGEFKKVHPG-ASLMLLSADTEKDRFQIFAMVPEAAKKGLDAREWVKAALDAAG-GGKGXXKPDDAMGNAAGVSGIESAIEAAK 499
BLAST of mRNA_S-dermatodea_contig10404.296.1 vs. uniprot
Match: A0A7R9WUI9_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WUI9_9STRA) HSP 1 Score: 105 bits (263), Expect = 1.030e-24 Identity = 86/211 (40.76%), Postives = 115/211 (54.50%), Query Frame = 1
Query: 7 GIAKGVRRIVAVTRGLAQGARERAAAFEQQLEAADAINDLALDITVRRLGAELDTSVFSLKAKNKFRARLAKLVQKAKTIKKKVMEERVGQAVNSGKAEAEKMKEAGENKLVFRADFGCDAKSAAKILAEVSKACPHLASLMLFTADEEADRWLCCGLIPNSKAAKKDANKWVQAALDASGKGGKGGGKGDRAQGISQGVDTLDKAMEAAR 639
GIAKG+RR+V VTR A+ A A AFE +L AA+A+ L+ V+ L AELD V S KN FRA L K+ +KA KK+ + G+ + G A + E NK+V+R DFG D K A + +K A LML +ADE ADR++ + +K D +WV + + G GGKGGGK D Q GV +D ME A+
Sbjct: 5 GIAKGIRRMVFVTREKAKAAIAAAEAFEVKLTAAEAVEGANLEKEVKTLTAELDALVISAVRKNDFRATLQKMSKKAVAWKKERLAGMTGE-IKQGAIAAGEASEG--NKVVYRFDFGIDGKLAKSVTQAFTKKIKDKA-LMLVSADEAADRFMVMAVA--AKGLDIDCKQWVTTSCE--GTGGKGGGKKDSCQFTVPGVSHVDAVMEKAK 207
BLAST of mRNA_S-dermatodea_contig10404.296.1 vs. uniprot
Match: A0A7S4ME88_9STRA (Alanine--tRNA ligase n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4ME88_9STRA) HSP 1 Score: 103 bits (258), Expect = 5.130e-22 Identity = 81/211 (38.39%), Postives = 110/211 (52.13%), Query Frame = 1
Query: 7 GIAKGVRRIVAVTRGLAQGARERAAAFEQQLEAADAINDLALDITVRRLGAELDTSVFSLKAKNKFRARLAKLVQKAKTIKKKVMEERVGQAVNSGKAEAEKMKEAGENKLVFRADFGCDAKSAAKILAEVSKACPHLASLMLFTADEEADRWLCCGLIPNSKAAKKDANKWVQAALDASGKGGKGGGKGDRAQGISQGVDTLDKAMEAAR 639
GIAKGVRRI AVT G A+ A ERA FE +L+ A A+ L+ V++L EL S+ K+ F+ L KL +KA KK+ R + V + A EAG NK+ R DFG D K A + +K A L++ TADE + R++ P D W QAA + G G KGGGK D AQ + G++ ++ +E AR
Sbjct: 761 GIAKGVRRITAVTGGDAKAAGERADEFEGRLKEAGALPGAELEAGVKKLSEELKDLSISVARKDGFKTELGKLTKKAMAWKKEQAAARTKEVVEQLVSAAN---EAGGNKIALRIDFGIDGKVAKSVAQSFAKKVKDKAFLLI-TADESSGRFMVVASAPKGMKDPVDCKAWCQAATE--GTGAKGGGKKDLAQFNATGIEKIEGVLEKAR 965
BLAST of mRNA_S-dermatodea_contig10404.296.1 vs. uniprot
Match: A0A7S0FSX1_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FSX1_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 7.400e-21 Identity = 87/216 (40.28%), Postives = 112/216 (51.85%), Query Frame = 1
Query: 7 GIAKGVRRIVAVTRGLAQGARERAAAFEQQLEAADAINDLALDITVRRLGAELDTSVFSLKAKNKFRARLAKLVQKAKTIKKKVMEERVGQAV-NSGKAEAEKMKEAGE---NKLVFRADFGCDAKSAAKILAEVSKACPHLASLMLFTADEEADRWLCCGLIPNSKAAKK-DANKWVQAALDASGKGGKGGGKGDRAQGISQGVDTLDKAMEAAR 639
GIAKGVRRIV VT+ A A +A FE +L A A+ L L+ +++LG EL S K F L KL + KK GQA +GK E + A NK+V R+DFG D K+A I A VSK A L++ +ADE+A R+L P K K D WV AA + G GGKGGGK D AQ G++ +D +E A+
Sbjct: 38 GIAKGVRRIVGVTKADAAAATAKADEFESRLTEASAVQGLELEGAIKKLGQELGELSISTVRKAGFNETLGKLGKAVVAWKK-------GQAAAKAGKVADELIAAASTTEGNKIVVRSDFGLDGKAAKSISAAVSKKVKDKAFLLV-SADEDAGRFLVFAFAP--KGLKDVDCKAWVAAATE--GTGGKGGGKKDAAQSNISGLEKIDGVLEKAK 241
BLAST of mRNA_S-dermatodea_contig10404.296.1 vs. uniprot
Match: B7G5M3_PHATC (Alanine--tRNA ligase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G5M3_PHATC) HSP 1 Score: 94.4 bits (233), Expect = 1.090e-18 Identity = 79/213 (37.09%), Postives = 111/213 (52.11%), Query Frame = 1
Query: 7 GIAKGVRRIVAVTRGLAQGARERAAAFEQQLEAADAINDLALDITVRRLGAELDTSVFSLKAKNKFRARLAKLVQKAKTIKKKVMEERVGQAVNSGKAEAEKMKEAGENKLVFRADFGCDAKSAAKILAEVSKACPHLASLMLFTADEEADRWLCCGLIPNSKAAKKDAN--KWVQAALDASGKGGKGGGKGDRAQGISQGVDTLDKAMEAAR 639
GIAKG+RRI A+T G A+ A A FE +L AA+ + L+ TV++L AELD + K +FR +LA + ++ KK+ + AG +K+V R DFG + K A ++ K A L+L TAD EADR++ +I + A KD N W++AA D G KGGGK D AQ GV+ +D +E AR
Sbjct: 767 GIAKGIRRITAITTGEAKKAIALANEFESKLTAAEVVQGDDLESTVKQLSAELDGLDIAAVKKMQFREQLATMTKQVLAYKKQKL--------------------AGGSKVVMRFDFGVEGKVAKSVMTAFGKQVKDKA-LLLVTADPEADRFM---VIAGAPKAMKDLNCKAWIEAATD--GLDAKGGGKPDSAQYQVSGVEAVDTVLEKAR 953
BLAST of mRNA_S-dermatodea_contig10404.296.1 vs. uniprot
Match: A0A7S2GZW7_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GZW7_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 4.220e-18 Identity = 79/212 (37.26%), Postives = 106/212 (50.00%), Query Frame = 1
Query: 7 GIAKGVRRIVAVTRGLAQGARERAAAFEQQLEAADAINDLALDITVRRLGAELDTSVFSLKAKNKFRARLAKLVQKAKTIKKKVMEERVGQAVNSGKAEAEKMKEAGENKLVFRADFGCDAKSAAKILAEVSKACPHLASLMLFTADEEADRWLCCGLIPNSKAAKK-DANKWVQAALDASGKGGKGGGKGDRAQGISQGVDTLDKAMEAAR 639
GIAKGVRRI AVT A + E E ++ A+ + LAL+ +++L E++ + S AK K R L ++ KK+ R + V + A KE NK+V R DFG D K+A I K A L+L +ADE +DR++ P K K D WV AA + G GGKGGGK D AQ G++ LD E AR
Sbjct: 58 GIAKGVRRITAVTMEDAVASSELCKEIESRVMKAEKLEGLALEEEIKKLTPEVNEANISAAAKMKMRGVLGVYGKRVVAWKKERAAARTSEVVQDAISAA---KETEGNKVVLRFDFGVDGKAAKSITGAYGKKVKDKA-LLLVSADESSDRFMVVAFAP--KGMKDVDCKAWVMAATE--GTGGKGGGKKDSAQFTVPGLEKLDSVFEKAR 261
BLAST of mRNA_S-dermatodea_contig10404.296.1 vs. uniprot
Match: A0A448YWB7_9STRA (Alanine--tRNA ligase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YWB7_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 1.080e-16 Identity = 78/216 (36.11%), Postives = 108/216 (50.00%), Query Frame = 1
Query: 7 GIAKGVRRIVAVTRGLAQGARERAAAFEQQLEAADAINDL-ALDITVRRLGAELDTSVFSLKAKNKFRARLAKLVQKAKTIKKKVM----EERVGQAVNSGKAEAEKMKEAGENKLVFRADFGCDAKSAAKILAEVSKACPHLASLMLFTADEEADRWLCCGLIPNSKAAKKDANKWVQAALDASGKGGKGGGKGDRAQGISQGVDTLDKAMEAAR 639
GIAKG+RRI VT A+ A A FE++L+AA + L+ V+ L E D+ V S K FR +A ++K T KKK M +E +A+ +G+A NK+VFR DFGCDAK + +K A +M+ +AD +A+R+L + P K D W + G GKGGGK D AQ V +D ME A+
Sbjct: 769 GIAKGIRRITFVTCNDAKAAIAAADEFEKKLDAASKLEGGDELEALVKSLTLECDSLVISTVKKTAFRETIAGFLKKVMTWKKKRMAGMKDEIATKAIEAGEATE-------GNKVVFRFDFGCDAKLGKNVATAFTKKIKDKA-IMIISADSDANRFLVLAMAP--KGLDVDCKAWCMGVTE--GTNGKGGGKKDSAQFTVPDVSLVDSVMEKAK 972 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10404.296.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10404.296.1 >prot_S-dermatodea_contig10404.296.1 ID=prot_S-dermatodea_contig10404.296.1|Name=mRNA_S-dermatodea_contig10404.296.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=218bp QVGIAKGVRRIVAVTRGLAQGARERAAAFEQQLEAADAINDLALDITVRRback to top mRNA from alignment at S-dermatodea_contig10404:359..4393+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10404.296.1 ID=mRNA_S-dermatodea_contig10404.296.1|Name=mRNA_S-dermatodea_contig10404.296.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4035bp|location=Sequence derived from alignment at S-dermatodea_contig10404:359..4393+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10404:359..4393+ >mRNA_S-dermatodea_contig10404.296.1 ID=mRNA_S-dermatodea_contig10404.296.1|Name=mRNA_S-dermatodea_contig10404.296.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1308bp|location=Sequence derived from alignment at S-dermatodea_contig10404:359..4393+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |