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Homology
BLAST of mRNA_S-dermatodea_contig10385.280.1 vs. uniprot
Match: D7FYJ6_ECTSI (Non-specific serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYJ6_ECTSI) HSP 1 Score: 77.8 bits (190), Expect = 3.280e-14 Identity = 40/63 (63.49%), Postives = 43/63 (68.25%), Query Frame = 1
Query: 4 GLSPTDVVVEWYEVMLGRLRCLDALGEHRKVLDSAIVLWRNLQEDMARVEANREPTGGFPSMA 192
GLS TDVVVEWY+VMLGRLRCLDALGEHRK ED ARV REP GGF ++A
Sbjct: 442 GLSTTDVVVEWYQVMLGRLRCLDALGEHRK-------------EDWARVGVGREPAGGFSTVA 491
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 78.2 |
| Seed ortholog evalue | 3e-12 |
| Seed eggNOG ortholog | 2880.D7FYJ6 |
| Preferred name | TOR1 |
| KEGG ko | ko:K07203 |
| KEGG Pathway | ko01521,ko01522,ko04012,ko04066,ko04072,ko04136,ko04138,ko04139,ko04140,ko04150,ko04151,ko04152,ko04211,ko04212,ko04213,ko04218,ko04371,ko04630,ko04659,ko04714,ko04910,ko04919,ko04920,ko04930,ko04931,ko05165,ko05167,ko05200,ko05205,ko05206,ko05210,ko05212,ko05214,ko05215,ko05221,ko05224,ko05225,ko05226,ko05230,ko05231,map01521,map01522,map04012,map04066,map04072,map04136,map04138,map04139,map04140,map04150,map04151,map04152,map04211,map04212,map04213,map04218,map04371,map04630,map04659,map04714,map04910,map04919,map04920,map04930,map04931,map05165,map05167,map05200,map05205,map05206,map05210,map05212,map05214,map05215,map05221,map05224,map05225,map05226,map05230,map05231 |
| EggNOG free text desc. | phosphatidylinositol kinase activity |
| EggNOG OGs | COG5032@1,KOG0891@2759 |
| EC | 2.7.11.1 |
| COG Functional cat. | BDLTU |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko01001,ko04131 |
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 369 |
| Cds size | 369 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10385.280.1 >prot_S-dermatodea_contig10385.280.1 ID=prot_S-dermatodea_contig10385.280.1|Name=mRNA_S-dermatodea_contig10385.280.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=123bp
AGLSPTDVVVEWYEVMLGRLRCLDALGEHRKVLDSAIVLWRNLQEDMARV
EANREPTGGFPSMATTRETRTKRSPLASLVSVSRPTTPLLSTTTMAVSAA
AATPVTTTTTIVATAAASATATP back to topmRNA from alignment at S-dermatodea_contig10385:3861..6863- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig10385.280.1 ID=mRNA_S-dermatodea_contig10385.280.1|Name=mRNA_S-dermatodea_contig10385.280.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3003bp|location=Sequence derived from alignment at S-dermatodea_contig10385:3861..6863- (Saccorhiza dermatodea SderLu1190fm monoicous)
GCGGGACTGTCGCCTACCGACGTCGTGGTGGAGTGGTGAGATTTCGGTTT
CGAAATTTCGGTTTCGAAAAGCTGCTGTGGAGGAGTTTAAGTCTTCCGTT
TGGTTTGTTTTCTTCTCCGATTTTCTTGCTTGTCTGACCACAAATGGGGG
TGTCGGCGGTAACCTTAAAAAACAAATCGTTACTGTGGTGCCGACCTGTT
AAATGTGTGCTAATAAATATGCATAGGTCTAAATCTATATAGTTTTTGCA
CATTTACAAGTGTGTGCGAAAGCGAAACGGGTTCGGGTTTCTCTCGCTTG
GAGCGGCGACACTCCTGAAGAAGCAATGCTATTACACGCTCCGCTCGCCC
CTAAGAGAGCCTCCGCGCTCGATGCAGCATCGACCCTGTTCTTCAATCGT
CCGCGCACATTACGGGCTGTTAGTAGAAACGCTGCAGTATCATCTGTTTG
GCGCTTTTTTGTGGAGACGGCGGTATCGTGTCCTGCAGCCGCAAGGCGAG
CGTGAGGCTTGCCGAATTGTTTTAGGCAGCAGACACGGGAGGATCTAGTG
CCCTGATATATTCCTATAATGTACGAGGGAATTTCGCTTGGCTTCGACGC
GTTGGTCCTATTGGTCGTGGAGTTCGGAGGCCTGCGGACTTTGGTCTTGG
ACAGGAGCGATGACGGTTCAAGGGACAGTCGAAGTAGTTTGTACAGGGTT
TCGGCACAGGGGAATACACTACTGCTCAACGTGGTGCTGTCGATGATTGG
TGATTTGTGGCAATGGTGGCAACGGCCTCAACCTGACTAATGAGCTACTG
TATCATACGCGTCTAGCACGTGCTTGGGTCAGCGAGGGGTGATTTACGGC
GATGGCGATGGCGATGGCAGCCTCCTATTGACTGGTGGGCCAAGTATCCA
GCCGTCATGGCCACGGATAAGAGATAAATTCCCGGCAGCAGCAGCAAGCG
AGCATCAGTCATGGCGCCCGCCACGCATCATATCCTTGGAGGTATCCACG
CCTGTCTTTGCGATCCTCGTGAGGAACGTCGTGGTTTGCATACTCTGATG
CACTGTGCCGGTCGATGCCGAATGCTCTTAACAGGTACGAGGTGATGCTG
GGGCGATTGAGGTGCCTGGACGCGCTGGGGGAGCACCGGAAAGTCCTGGA
CAGCGCCATCGTCCTCTGGCGAAACCTTCAGGCAAGCCACACCTTTAAGC
GTGCAATGGTGGCACTCTCAAGGGCGCGATGATGGTGGGGTGGGATATGG
GCCACTTCGGTTTTGCCGTGTTGGGTCTTCCCGGAAGCTCTACGGGGCGC
AGTCCGTGATATGTCCTGTGCAGGTGTTGCGTGAATGGGCTAGCAGAGCG
GAGATCGATAGGTCGGGCTGTCGCTACTGTATAGAGGCGCTGTGATGTGA
AGTGTCTCGTTGATGGCGTCGGCTCGTCTTGGTCCACGCTGCTGTACCGC
ACGATCGATACAGCGAGGGAATAAGCCCCTCCCCCCCGTTAAACTGAGAC
CTACAACCCCCTTGCCTTTGAGGTTTGAAGTGGGGGTTGGTCGAGGTAGG
GTTGACTCTTGTGACACGGAGCTTTAAAACTGCTATATGTAGTTCATGGG
GTGATTCATGCTGTATGTCTTGTCAGCTCGGAGACCTCGGTCGAAGAGTC
TTGTCTCTCCCGAAAGGGGCGAAACGCTTCACACCCTATAGGACACCTGC
TGAACATTGGATTGTTGGATTGCCCGAGAGCAACCATTGACCTTTGAATG
GTACTCTGCCAGGAGTACTCATGAGCAGATTATAGTCCGAGTGTATCACA
CATGTACCGTCGTGTGTACTGTGTGCGTGCGGTGCTTTTTTCATCGCACG
GTGATCAAAGTCCCGTAGCGGTATACTTGAGTATAGTCACGCCTACTGAA
TGCGCAACGTGTGGTTACCCGGTATTTCCAATCAGCCCATGGCACATCGT
TTGGCGTCGCAAACGCAAGGGTGATGACTAGCAGCTGGTGTATCATCCTT
GTGAAACGCAGCCTGGCCGGCGAAAACCCATTATATCGTTCCGCCCCGGC
ATTGTTGGGACGCGTGGCCTATCCCTGTATGGATACGACATGCGTTTAAC
ATAGGTACCCCCCCCCCCCCCCTAAAAAATATAGATTTTCAGAAACATAG
AGCGAGCGTTCCCCACCGCCTTAAAAGCGTCGCCGATGGGCCCTTGTGTC
AGATCTCCGCTCGTTTACTGCTCCCTGTAACACGCAGGAGAACACAGCTA
TCTTCATCACTCGCAGACTATCGTGTACTACAAGCGTTTTGAGCGCCCTT
AGCCTCCTCCTCCCCTGCCTCTGGTTGAGAGTTTCGCTTCGTTTTCCCTA
CGTCCGGGTTATCCCCATGCGTGCGCGCGCCCTTGTGCTCGGCACAACAG
GAAGATATGGCGAGGGTGGAAGCTAACCGTGAGCCCACTGGCGGCTTCCC
CTCAATGGCGACGACGAGAGAAACTCGAACCAAGGTCAGCGTTTGGACAT
TCGGGACGGGGTCCCGTGGTCACTACTGTGTTTGGTGTTCAGGCCTAGTG
GTAACTCCGGCAGCGTGCATGCTATGTATACAATTCCAGTATTCCAACCG
CCTAAGCGGCAACAAGGAAGGTAGTACCTTGCCGCCTGTGCTTTCGTAGT
CGCGTCTTATGGCGTGCCATCCGACGGGATGTCCACACCCTGGAGGCCAC
AGGCGGCAGTTGGCTGAATCCGCCCCACCCAAAAGTGTTCCCCCAACCTA
GGATAGGTCATAGGTCGTCGTCCTGTTCGTCCCCCCCACTCTCCTTAACC
GCCCCCCACCCCCTCCCCCTTTCCGCTTCTCACCGATTTTGGCTACCCAG
CGATCTCCTCTGGCGTCGCTGGTGTCGGTGTCCAGACCAACGACCCCCCT
GTTGTCGACGACAACTATGGCAGTATCGGCGGCCGCGGCAACGCCGGTAA
CGACAACGACGACAATAGTCGCTACGGCCGCAGCGTCAGCGACGGCAACT
CCC back to topCoding sequence (CDS) from alignment at S-dermatodea_contig10385:3861..6863- >mRNA_S-dermatodea_contig10385.280.1 ID=mRNA_S-dermatodea_contig10385.280.1|Name=mRNA_S-dermatodea_contig10385.280.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=738bp|location=Sequence derived from alignment at S-dermatodea_contig10385:3861..6863- (Saccorhiza dermatodea SderLu1190fm monoicous)
GCGGGACTGTCGCCTACCGACGTCGTGGTGGAGTGGCGGGACTGTCGCCT
ACCGACGTCGTGGTGGAGTGGTACGAGGTGATGCTGGGGCGATTGAGGTG
CCTGGACGCGCTGGGGGAGCACCGGAAAGTCCTGGACAGCGCCATCGTCC
TCTGGCGAAACCTTCAGGTACGAGGTGATGCTGGGGCGATTGAGGTGCCT
GGACGCGCTGGGGGAGCACCGGAAAGTCCTGGACAGCGCCATCGTCCTCT
GGCGAAACCTTCAGGAAGATATGGCGAGGGTGGAAGCTAACCGTGAGCCC
ACTGGCGGCTTCCCCTCAATGGCGACGACGAGAGAAACTCGAACCAAGGA
AGATATGGCGAGGGTGGAAGCTAACCGTGAGCCCACTGGCGGCTTCCCCT
CAATGGCGACGACGAGAGAAACTCGAACCAAGCGATCTCCTCTGGCGTCG
CTGGTGTCGGTGTCCAGACCAACGACCCCCCTGTTGTCGACGACAACTAT
GGCAGTATCGGCGGCCGCGGCAACGCCGGTAACGACAACGACGACAATAG
TCGCTACGGCCGCAGCGTCAGCGACGGCAACTCCCCGATCTCCTCTGGCG
TCGCTGGTGTCGGTGTCCAGACCAACGACCCCCCTGTTGTCGACGACAAC
TATGGCAGTATCGGCGGCCGCGGCAACGCCGGTAACGACAACGACGACAA
TAGTCGCTACGGCCGCAGCGTCAGCGACGGCAACTCCC back to top
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