mRNA_S-dermatodea_contig10361.268.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10361.268.1 vs. uniprot
Match: D7FKM0_ECTSI (HECT-type E3 ubiquitin transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKM0_ECTSI) HSP 1 Score: 353 bits (907), Expect = 1.090e-110 Identity = 168/189 (88.89%), Postives = 183/189 (96.83%), Query Frame = 1
Query: 1 DLIPGGRDVAVTNSSVINYIHLMAHFKLNVQTARPCKAFLQGFRHVSRDLIPVEWIRLFNPQELQRLIGGEGGRAIDVEDLRRNTRYAGGYHESQPVMQWFWEAIESFNPEEQGQFLKFVTSCSRPPLLGFERLHPPICLQRVPDGEDGRLPSSATCMNLLKLPQYTDRQTLREKLLYSISANAGFELT 567
DLIPGGRDVAVTN+SVI+YIHLMAHFKLNVQTARPCKAF++GFR DLIPVEW+R+FNPQELQRLIGGEGGRAIDVEDL+RNT YAGGYH++QPVMQWFWEAIESF+PEEQGQFLKFVTSCSRPPLLGFERL+PPICLQRVP+G++GRLPSSATCMNLLKLPQY DRQTLREKLLY+ISANAGFELT
Sbjct: 1211 DLIPGGRDVAVTNASVISYIHLMAHFKLNVQTARPCKAFMKGFR----DLIPVEWVRMFNPQELQRLIGGEGGRAIDVEDLKRNTLYAGGYHKTQPVMQWFWEAIESFSPEEQGQFLKFVTSCSRPPLLGFERLNPPICLQRVPEGDEGRLPSSATCMNLLKLPQYEDRQTLREKLLYAISANAGFELT 1395
BLAST of mRNA_S-dermatodea_contig10361.268.1 vs. uniprot
Match: A0A835YYA3_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYA3_9STRA) HSP 1 Score: 255 bits (651), Expect = 1.570e-80 Identity = 121/190 (63.68%), Postives = 152/190 (80.00%), Query Frame = 1
Query: 1 DLIPGGRDVAVTNSSVINYIHLMAHFKLNVQTARPCKAFLQGFRHVSRDLIPVEWIRLFNPQELQRLIGGEGGRAIDVEDLRRNTRYAGGYHESQPVMQWFWEAIESFNPEEQGQFLKFVTSCSRPPLLGFERLHPPICLQRVPDGEDG-RLPSSATCMNLLKLPQYTDRQTLREKLLYSISANAGFELT 567
DL+PGGR + VTN++V +Y+ L+AH++L+ TAR +AFL+GFR L+P +W+RLF P+ELQRL+GG+G R ID+ DLR +T Y GGYHESQPVM WFW+ I +F P +Q FLKFVTSCSR PLLGF+ L PP+C+Q+V GE G +LPSSATCMNLLKLP+Y R+TLREKLLY+ISA AGFELT
Sbjct: 261 DLVPGGRALDVTNANVASYVLLLAHYRLDRATARQTRAFLRGFRA----LVPTQWVRLFAPRELQRLVGGDGERRIDIADLRAHTTYGGGYHESQPVMHWFWDIIANFTPAQQALFLKFVTSCSRQPLLGFKHLSPPMCIQQVESGERGNKLPSSATCMNLLKLPRYDSRETLREKLLYAISAGAGFELT 446
BLAST of mRNA_S-dermatodea_contig10361.268.1 vs. uniprot
Match: A0A7S2G4K7_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G4K7_9STRA) HSP 1 Score: 228 bits (580), Expect = 2.610e-73 Identity = 112/186 (60.22%), Postives = 141/186 (75.81%), Query Frame = 1
Query: 16 GRDVAVTNSSVINYIHLMAHFKLNVQTARPCKAFLQGFRHVSRDLIPVEWIRLFNPQELQRLIGGEGGRAIDVEDLRRNTRYAGGYHESQPVMQWFWEAIESFNPEEQGQFLKFVTSCSRPPLLGFERLHPPICLQRVPDGEDG--RLPSSATCMNLLKLPQYTDRQTLREKLLYSISANAGFELT 567
G D+ VTN++ YI A+FKLN +TA AFL+GF D+I VEWIR+F+ +ELQ +IGGE RAID+++LR +TR +GGYH+SQP+MQWFW+ + P++QG FLKFVTS R PLLGFE + PPIC+Q+VP GEDG RLPS+ATCMNLLKLP Y LREKLLY+ISANAGFE++
Sbjct: 1 GADIPVTNANFFKYIAATANFKLNRETAAQSHAFLRGFH----DIINVEWIRMFDARELQMVIGGEA-RAIDIDNLRAHTRVSGGYHDSQPIMQWFWQVLRELTPQQQGDFLKFVTSSPRQPLLGFEYMQPPICIQKVPLGEDGPSRLPSAATCMNLLKLPDYPTCDILREKLLYAISANAGFEMS 181
BLAST of mRNA_S-dermatodea_contig10361.268.1 vs. uniprot
Match: A0A7R9Y9Y8_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y9Y8_9STRA) HSP 1 Score: 231 bits (588), Expect = 8.740e-72 Identity = 109/188 (57.98%), Postives = 141/188 (75.00%), Query Frame = 1
Query: 4 LIPGGRDVAVTNSSVINYIHLMAHFKLNVQTARPCKAFLQGFRHVSRDLIPVEWIRLFNPQELQRLIGGEGGRAIDVEDLRRNTRYAGGYHESQPVMQWFWEAIESFNPEEQGQFLKFVTSCSRPPLLGFERLHPPICLQRVPDGEDGRLPSSATCMNLLKLPQYTDRQTLREKLLYSISANAGFELT 567
L+P G +VAVT + + YIHL+AHFKLNV T +A L+GFR +LIPV W+RLFN E+Q LIGG+G ID+ DL+ + Y+GGYH SQP ++ FW+ ++ F P E FL+F+TSCSR PLLGF L+P IC+Q+VP G+LPS+ATCMNLLKLPQY D++TLR KLLY+IS+NAGF+LT
Sbjct: 202 LMPDGENVAVTAQNALQYIHLLAHFKLNVLTKAQSEAVLKGFR----ELIPVCWLRLFNAPEVQLLIGGDGYHPIDLNDLKAHCAYSGGYHPSQPYIKAFWQCVDEFTPREHADFLRFITSCSRQPLLGFSSLNPKICIQKVPHEPYGKLPSAATCMNLLKLPQYDDKETLRSKLLYAISSNAGFDLT 385
BLAST of mRNA_S-dermatodea_contig10361.268.1 vs. uniprot
Match: A0A485LLW5_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LLW5_9STRA) HSP 1 Score: 236 bits (601), Expect = 1.860e-69 Identity = 112/189 (59.26%), Postives = 143/189 (75.66%), Query Frame = 1
Query: 1 DLIPGGRDVAVTNSSVINYIHLMAHFKLNVQTARPCKAFLQGFRHVSRDLIPVEWIRLFNPQELQRLIGGEGGRAIDVEDLRRNTRYAGGYHESQPVMQWFWEAIESFNPEEQGQFLKFVTSCSRPPLLGFERLHPPICLQRVPDGEDGRLPSSATCMNLLKLPQYTDRQTLREKLLYSISANAGFELT 567
DLIPGGR+VAVTN +VI Y HL+AH+KLNVQ A C+AFL+GF DLIP+ W+ LF+P ELQ LIGG +++ D + NT Y GGYH SQP++QWFWE + PE++G L+F+TSCSR PLLGF++L P IC+Q+V +D RLPSSATCMNLLKLP Y+ ++ +R KLLY+I A AGFEL+
Sbjct: 703 DLIPGGRNVAVTNDNVIRYSHLLAHYKLNVQIAPACRAFLEGFH----DLIPIAWLHLFSPSELQMLIGGST-YDVNLTDWQANTNYGGGYHPSQPIIQWFWEIVAECTPEQRGDLLRFITSCSRQPLLGFKQLVPLICIQQVRIQDDERLPSSATCMNLLKLPTYSSKEIMRAKLLYAIQAKAGFELS 886
BLAST of mRNA_S-dermatodea_contig10361.268.1 vs. uniprot
Match: A0A6U6CBM7_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6CBM7_9STRA) HSP 1 Score: 224 bits (570), Expect = 2.550e-68 Identity = 114/207 (55.07%), Postives = 145/207 (70.05%), Query Frame = 1
Query: 1 DLIPGGRDVAVTNSSVINYIHLMAHFKLNVQTARPCKAFLQGFRHVSRDLIPVEWIRLFNPQELQRLIGGEGG-RAIDVEDLRRNTRYAGGYHESQPVMQWFWEAIESFNPEEQGQFLKFVTSCSRPPLLGFERLHPPICLQRVP--DGE---------------DGRLPSSATCMNLLKLPQYTDRQTLREKLLYSISANAGFELT 567
+L+PGG V VT +VI Y+HL+AH KLN T+ ++FL+GFR DL+P W+RLFNP+ELQRLIGG+ R IDV+ L+R T+Y+GGYH SQP+M WFWE +E +P+ Q FLKFVTSCSR PLLGF L P C+Q++ DGE D RLP+S+TCMNLLKLP+Y ++ LREKLLY+I A AGFEL+
Sbjct: 249 ELMPGGSSVPVTRRNVIRYVHLVAHAKLNASTSLQTRSFLRGFR----DLVPPSWVRLFNPRELQRLIGGDDTVRGIDVDGLKRVTQYSGGYHPSQPIMTWFWEVLEEMSPQRQRAFLKFVTSCSRQPLLGFGALDPLPCVQQIHLRDGEGFGGGRGRAGGGNQGDVRLPTSSTCMNLLKLPKYPSKEILREKLLYAIEAGAGFELS 451
BLAST of mRNA_S-dermatodea_contig10361.268.1 vs. uniprot
Match: A0A6G0XCA9_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XCA9_9STRA) HSP 1 Score: 233 bits (593), Expect = 2.950e-68 Identity = 108/189 (57.14%), Postives = 141/189 (74.60%), Query Frame = 1
Query: 1 DLIPGGRDVAVTNSSVINYIHLMAHFKLNVQTARPCKAFLQGFRHVSRDLIPVEWIRLFNPQELQRLIGGEGGRAIDVEDLRRNTRYAGGYHESQPVMQWFWEAIESFNPEEQGQFLKFVTSCSRPPLLGFERLHPPICLQRVPDGEDGRLPSSATCMNLLKLPQYTDRQTLREKLLYSISANAGFELT 567
DL+PGG+ +A+TN +VI Y HL AH+KLNVQ A +AFL+GF DLIP EW+ LF+P ELQ LIGG +++ D + NT YAGGYH SQP++ WFWE +E E++G L+F+TSCSR PLLGF++L+P IC+Q+V +D RLPSSATCMN+LKLP YT ++ +R KLLY+I A AGFEL+
Sbjct: 716 DLVPGGQSIAITNENVIRYCHLFAHYKLNVQIAAATRAFLEGFH----DLIPTEWLHLFSPTELQMLIGGST-YDVNIADWKANTNYAGGYHPSQPIIHWFWEIVEEMTSEQRGDLLRFITSCSRQPLLGFKQLNPLICIQQVRIHDDDRLPSSATCMNILKLPTYTSKEIMRGKLLYAIQAKAGFELS 899
BLAST of mRNA_S-dermatodea_contig10361.268.1 vs. uniprot
Match: W7TQY7_9STRA (HECT-type E3 ubiquitin transferase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQY7_9STRA) HSP 1 Score: 235 bits (599), Expect = 3.230e-68 Identity = 115/191 (60.21%), Postives = 147/191 (76.96%), Query Frame = 1
Query: 1 DLIPGGRDVAVTNSSVINYIHLMAHFKLNVQTARPCKAFLQGFRHVSRDLIPVEWIRLFNPQELQRLIGGEGGRAIDVEDLRRNTRYAGGYHESQPVMQWFWEAIESFNPEEQGQFLKFVTSCSRPPLLGFERLHPPICLQRVPDGEDG--RLPSSATCMNLLKLPQYTDRQTLREKLLYSISANAGFELT 567
+L+PGG+ V VTN +V YI L+A+ KLNV+ +AFL+GFR DLIP+ W+R+F +ELQ L+ GE RAID+E+LR +TRY+GGYH SQP++ WFWEA+ S+ P+EQ FL FVTSCSR PLLGF+ L+PP+C+QRVP +G RLPSSATCMNLLKLP Y + LREKLLY+I+A AGFEL+
Sbjct: 1102 ELVPGGKHVPVTNQNVFRYIQLVANHKLNVEINTQAQAFLRGFR----DLIPMPWLRMFGAEELQILLTGEK-RAIDIENLRAHTRYSGGYHPSQPIIHWFWEALRSYTPDEQAAFLMFVTSCSRQPLLGFQHLNPPVCIQRVPLTTEGGERLPSSATCMNLLKLPAYPTPEMLREKLLYAITAGAGFELS 1287
BLAST of mRNA_S-dermatodea_contig10361.268.1 vs. uniprot
Match: A0A7R9ZRY8_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZRY8_9STRA) HSP 1 Score: 216 bits (550), Expect = 1.680e-67 Identity = 110/196 (56.12%), Postives = 143/196 (72.96%), Query Frame = 1
Query: 1 DLIPGGRDVAVTNSSVINYIHLMAHFKLNVQTARPCKAFLQGFRHVSRDLIPVEWIRLFNPQELQRLIGGEGG-RAIDVEDLRRNTRYAGGYHESQPVMQWFWEAIES-FNPEEQGQFLKFVTSCSRPPLLGFERLHPPICLQ--RVPDGED---GRLPSSATCMNLLKLPQYTDRQTLREKLLYSISANAGFELT 567
+L+PGGRD AVT +VI YIHL+AH++LN+Q +AFL+GFR DLIP W+RLF+ ELQ+LIGG+ R IDV L+R+ +YAGGYH SQPV+ FW+ +++ F P++Q +FLKF+TSCSR PLLGF L P C+Q R+P+G D RLP+SATC NLLKLP Y + LR+KLL +I + AGFELT
Sbjct: 80 ELVPGGRDKAVTKQNVIQYIHLVAHYRLNIQAYHQTRAFLRGFR----DLIPASWVRLFSANELQKLIGGDDSIRGIDVAALKRSMQYAGGYHPSQPVVHDFWDLLQNDFTPDQQKKFLKFMTSCSRQPLLGFGSLEPAPCIQQIRLPEGADKEQSRLPTSATCFNLLKLPNYGSKNLLRKKLLAAIESGAGFELT 271
BLAST of mRNA_S-dermatodea_contig10361.268.1 vs. uniprot
Match: A0A5D6Y9R7_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y9R7_9STRA) HSP 1 Score: 226 bits (577), Expect = 2.280e-65 Identity = 109/190 (57.37%), Postives = 144/190 (75.79%), Query Frame = 1
Query: 1 DLIPGGRDVAVTNSSVINYIHLMAHFKLNVQTARPCKAFLQGFRHVSRDLIPVEWIRLFNPQELQRLIGGEGGRAIDVEDLRRNTRYAGGYHESQPVMQWFWEAIE-SFNPEEQGQFLKFVTSCSRPPLLGFERLHPPICLQRVPDGEDGRLPSSATCMNLLKLPQYTDRQTLREKLLYSISANAGFELT 567
+LIPGG DVAVT+++ I YIHL+A++KLNV A AFLQGFR DLIP +W+++F+P ELQ L+GG +IDV+D R+T Y GGYH SQP +QWFW+ + F+ ++ LKF+TSCSR PLLGF +L PP+C+ +V ED RLPSSATCMNLLKLP Y+ ++ +R+KLLY+ISANAGF+L+
Sbjct: 945 ELIPGGADVAVTSATRIRYIHLLANYKLNVLAASASAAFLQGFR----DLIPAKWVQMFSPAELQTLLGGSAN-SIDVDDWERHTAYGGGYHPSQPAVQWFWDIVRHDFDAADRAALLKFITSCSRQPLLGFAQLAPPLCVHQVRTTEDERLPSSATCMNLLKLPTYSSKEIMRKKLLYAISANAGFDLS 1129 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10361.268.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10361.268.1 >prot_S-dermatodea_contig10361.268.1 ID=prot_S-dermatodea_contig10361.268.1|Name=mRNA_S-dermatodea_contig10361.268.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=190bp DLIPGGRDVAVTNSSVINYIHLMAHFKLNVQTARPCKAFLQGFRHVSRDLback to top mRNA from alignment at S-dermatodea_contig10361:5659..7484- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10361.268.1 ID=mRNA_S-dermatodea_contig10361.268.1|Name=mRNA_S-dermatodea_contig10361.268.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1826bp|location=Sequence derived from alignment at S-dermatodea_contig10361:5659..7484- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10361:5659..7484- >mRNA_S-dermatodea_contig10361.268.1 ID=mRNA_S-dermatodea_contig10361.268.1|Name=mRNA_S-dermatodea_contig10361.268.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1140bp|location=Sequence derived from alignment at S-dermatodea_contig10361:5659..7484- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |