mRNA_S-dermatodea_contig10361.268.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig10361.268.1
Unique NamemRNA_S-dermatodea_contig10361.268.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig10361.268.1 vs. uniprot
Match: D7FKM0_ECTSI (HECT-type E3 ubiquitin transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKM0_ECTSI)

HSP 1 Score: 353 bits (907), Expect = 1.090e-110
Identity = 168/189 (88.89%), Postives = 183/189 (96.83%), Query Frame = 1
Query:    1 DLIPGGRDVAVTNSSVINYIHLMAHFKLNVQTARPCKAFLQGFRHVSRDLIPVEWIRLFNPQELQRLIGGEGGRAIDVEDLRRNTRYAGGYHESQPVMQWFWEAIESFNPEEQGQFLKFVTSCSRPPLLGFERLHPPICLQRVPDGEDGRLPSSATCMNLLKLPQYTDRQTLREKLLYSISANAGFELT 567
            DLIPGGRDVAVTN+SVI+YIHLMAHFKLNVQTARPCKAF++GFR    DLIPVEW+R+FNPQELQRLIGGEGGRAIDVEDL+RNT YAGGYH++QPVMQWFWEAIESF+PEEQGQFLKFVTSCSRPPLLGFERL+PPICLQRVP+G++GRLPSSATCMNLLKLPQY DRQTLREKLLY+ISANAGFELT
Sbjct: 1211 DLIPGGRDVAVTNASVISYIHLMAHFKLNVQTARPCKAFMKGFR----DLIPVEWVRMFNPQELQRLIGGEGGRAIDVEDLKRNTLYAGGYHKTQPVMQWFWEAIESFSPEEQGQFLKFVTSCSRPPLLGFERLNPPICLQRVPEGDEGRLPSSATCMNLLKLPQYEDRQTLREKLLYAISANAGFELT 1395          
BLAST of mRNA_S-dermatodea_contig10361.268.1 vs. uniprot
Match: A0A835YYA3_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYA3_9STRA)

HSP 1 Score: 255 bits (651), Expect = 1.570e-80
Identity = 121/190 (63.68%), Postives = 152/190 (80.00%), Query Frame = 1
Query:    1 DLIPGGRDVAVTNSSVINYIHLMAHFKLNVQTARPCKAFLQGFRHVSRDLIPVEWIRLFNPQELQRLIGGEGGRAIDVEDLRRNTRYAGGYHESQPVMQWFWEAIESFNPEEQGQFLKFVTSCSRPPLLGFERLHPPICLQRVPDGEDG-RLPSSATCMNLLKLPQYTDRQTLREKLLYSISANAGFELT 567
            DL+PGGR + VTN++V +Y+ L+AH++L+  TAR  +AFL+GFR     L+P +W+RLF P+ELQRL+GG+G R ID+ DLR +T Y GGYHESQPVM WFW+ I +F P +Q  FLKFVTSCSR PLLGF+ L PP+C+Q+V  GE G +LPSSATCMNLLKLP+Y  R+TLREKLLY+ISA AGFELT
Sbjct:  261 DLVPGGRALDVTNANVASYVLLLAHYRLDRATARQTRAFLRGFRA----LVPTQWVRLFAPRELQRLVGGDGERRIDIADLRAHTTYGGGYHESQPVMHWFWDIIANFTPAQQALFLKFVTSCSRQPLLGFKHLSPPMCIQQVESGERGNKLPSSATCMNLLKLPRYDSRETLREKLLYAISAGAGFELT 446          
BLAST of mRNA_S-dermatodea_contig10361.268.1 vs. uniprot
Match: A0A7S2G4K7_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G4K7_9STRA)

HSP 1 Score: 228 bits (580), Expect = 2.610e-73
Identity = 112/186 (60.22%), Postives = 141/186 (75.81%), Query Frame = 1
Query:   16 GRDVAVTNSSVINYIHLMAHFKLNVQTARPCKAFLQGFRHVSRDLIPVEWIRLFNPQELQRLIGGEGGRAIDVEDLRRNTRYAGGYHESQPVMQWFWEAIESFNPEEQGQFLKFVTSCSRPPLLGFERLHPPICLQRVPDGEDG--RLPSSATCMNLLKLPQYTDRQTLREKLLYSISANAGFELT 567
            G D+ VTN++   YI   A+FKLN +TA    AFL+GF     D+I VEWIR+F+ +ELQ +IGGE  RAID+++LR +TR +GGYH+SQP+MQWFW+ +    P++QG FLKFVTS  R PLLGFE + PPIC+Q+VP GEDG  RLPS+ATCMNLLKLP Y     LREKLLY+ISANAGFE++
Sbjct:    1 GADIPVTNANFFKYIAATANFKLNRETAAQSHAFLRGFH----DIINVEWIRMFDARELQMVIGGEA-RAIDIDNLRAHTRVSGGYHDSQPIMQWFWQVLRELTPQQQGDFLKFVTSSPRQPLLGFEYMQPPICIQKVPLGEDGPSRLPSAATCMNLLKLPDYPTCDILREKLLYAISANAGFEMS 181          
BLAST of mRNA_S-dermatodea_contig10361.268.1 vs. uniprot
Match: A0A7R9Y9Y8_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y9Y8_9STRA)

HSP 1 Score: 231 bits (588), Expect = 8.740e-72
Identity = 109/188 (57.98%), Postives = 141/188 (75.00%), Query Frame = 1
Query:    4 LIPGGRDVAVTNSSVINYIHLMAHFKLNVQTARPCKAFLQGFRHVSRDLIPVEWIRLFNPQELQRLIGGEGGRAIDVEDLRRNTRYAGGYHESQPVMQWFWEAIESFNPEEQGQFLKFVTSCSRPPLLGFERLHPPICLQRVPDGEDGRLPSSATCMNLLKLPQYTDRQTLREKLLYSISANAGFELT 567
            L+P G +VAVT  + + YIHL+AHFKLNV T    +A L+GFR    +LIPV W+RLFN  E+Q LIGG+G   ID+ DL+ +  Y+GGYH SQP ++ FW+ ++ F P E   FL+F+TSCSR PLLGF  L+P IC+Q+VP    G+LPS+ATCMNLLKLPQY D++TLR KLLY+IS+NAGF+LT
Sbjct:  202 LMPDGENVAVTAQNALQYIHLLAHFKLNVLTKAQSEAVLKGFR----ELIPVCWLRLFNAPEVQLLIGGDGYHPIDLNDLKAHCAYSGGYHPSQPYIKAFWQCVDEFTPREHADFLRFITSCSRQPLLGFSSLNPKICIQKVPHEPYGKLPSAATCMNLLKLPQYDDKETLRSKLLYAISSNAGFDLT 385          
BLAST of mRNA_S-dermatodea_contig10361.268.1 vs. uniprot
Match: A0A485LLW5_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LLW5_9STRA)

HSP 1 Score: 236 bits (601), Expect = 1.860e-69
Identity = 112/189 (59.26%), Postives = 143/189 (75.66%), Query Frame = 1
Query:    1 DLIPGGRDVAVTNSSVINYIHLMAHFKLNVQTARPCKAFLQGFRHVSRDLIPVEWIRLFNPQELQRLIGGEGGRAIDVEDLRRNTRYAGGYHESQPVMQWFWEAIESFNPEEQGQFLKFVTSCSRPPLLGFERLHPPICLQRVPDGEDGRLPSSATCMNLLKLPQYTDRQTLREKLLYSISANAGFELT 567
            DLIPGGR+VAVTN +VI Y HL+AH+KLNVQ A  C+AFL+GF     DLIP+ W+ LF+P ELQ LIGG     +++ D + NT Y GGYH SQP++QWFWE +    PE++G  L+F+TSCSR PLLGF++L P IC+Q+V   +D RLPSSATCMNLLKLP Y+ ++ +R KLLY+I A AGFEL+
Sbjct:  703 DLIPGGRNVAVTNDNVIRYSHLLAHYKLNVQIAPACRAFLEGFH----DLIPIAWLHLFSPSELQMLIGGST-YDVNLTDWQANTNYGGGYHPSQPIIQWFWEIVAECTPEQRGDLLRFITSCSRQPLLGFKQLVPLICIQQVRIQDDERLPSSATCMNLLKLPTYSSKEIMRAKLLYAIQAKAGFELS 886          
BLAST of mRNA_S-dermatodea_contig10361.268.1 vs. uniprot
Match: A0A6U6CBM7_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6CBM7_9STRA)

HSP 1 Score: 224 bits (570), Expect = 2.550e-68
Identity = 114/207 (55.07%), Postives = 145/207 (70.05%), Query Frame = 1
Query:    1 DLIPGGRDVAVTNSSVINYIHLMAHFKLNVQTARPCKAFLQGFRHVSRDLIPVEWIRLFNPQELQRLIGGEGG-RAIDVEDLRRNTRYAGGYHESQPVMQWFWEAIESFNPEEQGQFLKFVTSCSRPPLLGFERLHPPICLQRVP--DGE---------------DGRLPSSATCMNLLKLPQYTDRQTLREKLLYSISANAGFELT 567
            +L+PGG  V VT  +VI Y+HL+AH KLN  T+   ++FL+GFR    DL+P  W+RLFNP+ELQRLIGG+   R IDV+ L+R T+Y+GGYH SQP+M WFWE +E  +P+ Q  FLKFVTSCSR PLLGF  L P  C+Q++   DGE               D RLP+S+TCMNLLKLP+Y  ++ LREKLLY+I A AGFEL+
Sbjct:  249 ELMPGGSSVPVTRRNVIRYVHLVAHAKLNASTSLQTRSFLRGFR----DLVPPSWVRLFNPRELQRLIGGDDTVRGIDVDGLKRVTQYSGGYHPSQPIMTWFWEVLEEMSPQRQRAFLKFVTSCSRQPLLGFGALDPLPCVQQIHLRDGEGFGGGRGRAGGGNQGDVRLPTSSTCMNLLKLPKYPSKEILREKLLYAIEAGAGFELS 451          
BLAST of mRNA_S-dermatodea_contig10361.268.1 vs. uniprot
Match: A0A6G0XCA9_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XCA9_9STRA)

HSP 1 Score: 233 bits (593), Expect = 2.950e-68
Identity = 108/189 (57.14%), Postives = 141/189 (74.60%), Query Frame = 1
Query:    1 DLIPGGRDVAVTNSSVINYIHLMAHFKLNVQTARPCKAFLQGFRHVSRDLIPVEWIRLFNPQELQRLIGGEGGRAIDVEDLRRNTRYAGGYHESQPVMQWFWEAIESFNPEEQGQFLKFVTSCSRPPLLGFERLHPPICLQRVPDGEDGRLPSSATCMNLLKLPQYTDRQTLREKLLYSISANAGFELT 567
            DL+PGG+ +A+TN +VI Y HL AH+KLNVQ A   +AFL+GF     DLIP EW+ LF+P ELQ LIGG     +++ D + NT YAGGYH SQP++ WFWE +E    E++G  L+F+TSCSR PLLGF++L+P IC+Q+V   +D RLPSSATCMN+LKLP YT ++ +R KLLY+I A AGFEL+
Sbjct:  716 DLVPGGQSIAITNENVIRYCHLFAHYKLNVQIAAATRAFLEGFH----DLIPTEWLHLFSPTELQMLIGGST-YDVNIADWKANTNYAGGYHPSQPIIHWFWEIVEEMTSEQRGDLLRFITSCSRQPLLGFKQLNPLICIQQVRIHDDDRLPSSATCMNILKLPTYTSKEIMRGKLLYAIQAKAGFELS 899          
BLAST of mRNA_S-dermatodea_contig10361.268.1 vs. uniprot
Match: W7TQY7_9STRA (HECT-type E3 ubiquitin transferase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQY7_9STRA)

HSP 1 Score: 235 bits (599), Expect = 3.230e-68
Identity = 115/191 (60.21%), Postives = 147/191 (76.96%), Query Frame = 1
Query:    1 DLIPGGRDVAVTNSSVINYIHLMAHFKLNVQTARPCKAFLQGFRHVSRDLIPVEWIRLFNPQELQRLIGGEGGRAIDVEDLRRNTRYAGGYHESQPVMQWFWEAIESFNPEEQGQFLKFVTSCSRPPLLGFERLHPPICLQRVPDGEDG--RLPSSATCMNLLKLPQYTDRQTLREKLLYSISANAGFELT 567
            +L+PGG+ V VTN +V  YI L+A+ KLNV+     +AFL+GFR    DLIP+ W+R+F  +ELQ L+ GE  RAID+E+LR +TRY+GGYH SQP++ WFWEA+ S+ P+EQ  FL FVTSCSR PLLGF+ L+PP+C+QRVP   +G  RLPSSATCMNLLKLP Y   + LREKLLY+I+A AGFEL+
Sbjct: 1102 ELVPGGKHVPVTNQNVFRYIQLVANHKLNVEINTQAQAFLRGFR----DLIPMPWLRMFGAEELQILLTGEK-RAIDIENLRAHTRYSGGYHPSQPIIHWFWEALRSYTPDEQAAFLMFVTSCSRQPLLGFQHLNPPVCIQRVPLTTEGGERLPSSATCMNLLKLPAYPTPEMLREKLLYAITAGAGFELS 1287          
BLAST of mRNA_S-dermatodea_contig10361.268.1 vs. uniprot
Match: A0A7R9ZRY8_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZRY8_9STRA)

HSP 1 Score: 216 bits (550), Expect = 1.680e-67
Identity = 110/196 (56.12%), Postives = 143/196 (72.96%), Query Frame = 1
Query:    1 DLIPGGRDVAVTNSSVINYIHLMAHFKLNVQTARPCKAFLQGFRHVSRDLIPVEWIRLFNPQELQRLIGGEGG-RAIDVEDLRRNTRYAGGYHESQPVMQWFWEAIES-FNPEEQGQFLKFVTSCSRPPLLGFERLHPPICLQ--RVPDGED---GRLPSSATCMNLLKLPQYTDRQTLREKLLYSISANAGFELT 567
            +L+PGGRD AVT  +VI YIHL+AH++LN+Q     +AFL+GFR    DLIP  W+RLF+  ELQ+LIGG+   R IDV  L+R+ +YAGGYH SQPV+  FW+ +++ F P++Q +FLKF+TSCSR PLLGF  L P  C+Q  R+P+G D    RLP+SATC NLLKLP Y  +  LR+KLL +I + AGFELT
Sbjct:   80 ELVPGGRDKAVTKQNVIQYIHLVAHYRLNIQAYHQTRAFLRGFR----DLIPASWVRLFSANELQKLIGGDDSIRGIDVAALKRSMQYAGGYHPSQPVVHDFWDLLQNDFTPDQQKKFLKFMTSCSRQPLLGFGSLEPAPCIQQIRLPEGADKEQSRLPTSATCFNLLKLPNYGSKNLLRKKLLAAIESGAGFELT 271          
BLAST of mRNA_S-dermatodea_contig10361.268.1 vs. uniprot
Match: A0A5D6Y9R7_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y9R7_9STRA)

HSP 1 Score: 226 bits (577), Expect = 2.280e-65
Identity = 109/190 (57.37%), Postives = 144/190 (75.79%), Query Frame = 1
Query:    1 DLIPGGRDVAVTNSSVINYIHLMAHFKLNVQTARPCKAFLQGFRHVSRDLIPVEWIRLFNPQELQRLIGGEGGRAIDVEDLRRNTRYAGGYHESQPVMQWFWEAIE-SFNPEEQGQFLKFVTSCSRPPLLGFERLHPPICLQRVPDGEDGRLPSSATCMNLLKLPQYTDRQTLREKLLYSISANAGFELT 567
            +LIPGG DVAVT+++ I YIHL+A++KLNV  A    AFLQGFR    DLIP +W+++F+P ELQ L+GG    +IDV+D  R+T Y GGYH SQP +QWFW+ +   F+  ++   LKF+TSCSR PLLGF +L PP+C+ +V   ED RLPSSATCMNLLKLP Y+ ++ +R+KLLY+ISANAGF+L+
Sbjct:  945 ELIPGGADVAVTSATRIRYIHLLANYKLNVLAASASAAFLQGFR----DLIPAKWVQMFSPAELQTLLGGSAN-SIDVDDWERHTAYGGGYHPSQPAVQWFWDIVRHDFDAADRAALLKFITSCSRQPLLGFAQLAPPLCVHQVRTTEDERLPSSATCMNLLKLPTYSSKEIMRKKLLYAISANAGFDLS 1129          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10361.268.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKM0_ECTSI1.090e-11088.89HECT-type E3 ubiquitin transferase n=2 Tax=Ectocar... [more]
A0A835YYA3_9STRA1.570e-8063.68HECT-type E3 ubiquitin transferase n=1 Tax=Tribone... [more]
A0A7S2G4K7_9STRA2.610e-7360.22HECT-type E3 ubiquitin transferase n=1 Tax=Florenc... [more]
A0A7R9Y9Y8_9STRA8.740e-7257.98HECT-type E3 ubiquitin transferase n=1 Tax=Pinguio... [more]
A0A485LLW5_9STRA1.860e-6959.26HECT-type E3 ubiquitin transferase n=1 Tax=Aphanom... [more]
A0A6U6CBM7_9STRA2.550e-6855.07HECT-type E3 ubiquitin transferase n=1 Tax=Odontel... [more]
A0A6G0XCA9_9STRA2.950e-6857.14HECT-type E3 ubiquitin transferase n=1 Tax=Aphanom... [more]
W7TQY7_9STRA3.230e-6860.21HECT-type E3 ubiquitin transferase n=3 Tax=Monodop... [more]
A0A7R9ZRY8_9STRA1.680e-6756.12HECT-type E3 ubiquitin transferase n=1 Tax=Crasped... [more]
A0A5D6Y9R7_9STRA2.280e-6557.37HECT-type E3 ubiquitin transferase n=1 Tax=Pythium... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10361contigS-dermatodea_contig10361:5659..7484 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score355.5
Seed ortholog evalue1.5e-95
Seed eggNOG ortholog2880.D7FKM0
KEGG koko:K10589
KEGG Pathwayko04120,map04120
GOsGO:0003674,GO:0003824,GO:0004842,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016567,GO:0016740,GO:0019538,GO:0019787,GO:0032446,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0061630,GO:0061659,GO:0070647,GO:0071704,GO:0140096,GO:1901564
EggNOG free text desc.ubiquitin-protein transferase activity
EggNOG OGsCOG5021@1,KOG0942@2759
EC2.3.2.26
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04121
Hectar predicted targeting categoryother localisation
Exons4
Model size570
Cds size570
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10361.268.1prot_S-dermatodea_contig10361.268.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig10361 5659..7484 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924153.5397139-CDS-S-dermatodea_contig10361:5658..57421622924153.5397139-CDS-S-dermatodea_contig10361:5658..5742Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10361 5659..5742 -
1694079054.2120388-CDS-S-dermatodea_contig10361:5658..57421694079054.2120388-CDS-S-dermatodea_contig10361:5658..5742Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10361 5659..5742 -
1622924153.549221-CDS-S-dermatodea_contig10361:6226..64151622924153.549221-CDS-S-dermatodea_contig10361:6226..6415Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10361 6227..6415 -
1694079054.225115-CDS-S-dermatodea_contig10361:6226..64151694079054.225115-CDS-S-dermatodea_contig10361:6226..6415Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10361 6227..6415 -
1622924153.5577092-CDS-S-dermatodea_contig10361:6552..67061622924153.5577092-CDS-S-dermatodea_contig10361:6552..6706Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10361 6553..6706 -
1694079054.2358062-CDS-S-dermatodea_contig10361:6552..67061694079054.2358062-CDS-S-dermatodea_contig10361:6552..6706Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10361 6553..6706 -
1622924153.5686564-CDS-S-dermatodea_contig10361:7341..74841622924153.5686564-CDS-S-dermatodea_contig10361:7341..7484Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10361 7342..7484 -
1694079054.2454927-CDS-S-dermatodea_contig10361:7341..74841694079054.2454927-CDS-S-dermatodea_contig10361:7341..7484Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10361 7342..7484 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig10361.268.1

>prot_S-dermatodea_contig10361.268.1 ID=prot_S-dermatodea_contig10361.268.1|Name=mRNA_S-dermatodea_contig10361.268.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=190bp
DLIPGGRDVAVTNSSVINYIHLMAHFKLNVQTARPCKAFLQGFRHVSRDL
IPVEWIRLFNPQELQRLIGGEGGRAIDVEDLRRNTRYAGGYHESQPVMQW
FWEAIESFNPEEQGQFLKFVTSCSRPPLLGFERLHPPICLQRVPDGEDGR
LPSSATCMNLLKLPQYTDRQTLREKLLYSISANAGFELT*
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mRNA from alignment at S-dermatodea_contig10361:5659..7484-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig10361.268.1 ID=mRNA_S-dermatodea_contig10361.268.1|Name=mRNA_S-dermatodea_contig10361.268.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1826bp|location=Sequence derived from alignment at S-dermatodea_contig10361:5659..7484- (Saccorhiza dermatodea SderLu1190fm monoicous)
GACTTAATTCCCGGAGGGAGGGACGTGGCCGTTACCAATTCATCGGTAAT TAACTACATACACCTCATGGCGCACTTCAAGCTGAACGTGCAGACCGCCC GCCCGTGTAAGGCTTTTCTGCAGGGTTTCAGGCACGTCTCGCGGTTTGGC CAGATACTGTCCATATCGCACTTTTGTTATAAGCTCTTCTTGGTGCGTCC CGCGGTGGACATGGGGGTACGCAGAGAACAATGCCACCGCAGAAATTGTT AAGTCCGAACATACGGACAAGTGACAACATTTCTACCCTGGTGGACAGTT TCGGAAACGTTTGCCACGTGTCTTGGAGAGCGTGCAAGTACGTATCGTAG CTGCATCAAACGAGTACGGGTCACCTTAGAAGCTCCGCCAATCCCGCGAA GGTCGGTGCTGCTTAAAAATATTATATTGGCTCCATTCGCCCGGCACTGA AAAACTGCTTAGATTATTTCCCAAGAGTACACGAGATGCTGAGCATATTG CCCAAACATCACCAACGCTGTTGCGCTTTTGTTTCTTGAAGTACTGCGAT GAGGTGTCCCTCCAAGGCAGCCACAGGGGGGCAACCTCAGCCCAAGCCGT TCAACTACAAAATCGACTCGGAAAACGATGGGCAACTCGCCGGGCAGAAA AAAAACAACCGCAATCCAAGTACAAACCTGTTTATATCTGCAGCGGCCCG CCCGTGCAGAGTAGGCTTCTTGTCGCTGTTAATTGCGCGAGCTTTATCCC TGCCGTGCGTGTGCTTTTGAATATACAGGGACTTGATTCCGGTGGAGTGG ATCCGCCTGTTCAACCCCCAGGAGCTTCAGAGGCTTATTGGCGGAGAGGG AGGGCGCGCGATCGACGTGGAGGACTTGAGACGGAACACTCGCTACGCGG GGGGATACCACGAGTCGCAGCCCGTCATGCAGGTATGCCCTGTCGTATTT TGAGGAACGGACACGAGCCGCGATGATCACTTCGCTCCACATGTGCACCA CACAGGTAGTATCATCACCGCTTTTTCTTACCATGATGCGCCATGTGCTC ACGCGCCTTGCGGTTGCAGTGGTTCTGGGAAGCGATCGAGTCCTTCAACC CAGAGGAGCAGGGGCAATTCCTCAAGTTCGTGACGTCATGCTCGAGGCCA CCGCTGCTGGGATTCGAGCGCCTCCATCCGCCCATCTGCTTGCAGCGAGT CCCCGACGGAGAGGATGGGAGGCTACCCTCCAGCGCTACGTGCATGAATC TGCTCAAGGTGTGTTTGTGTTTTTGGGTGCTTCGTGTGTAATTGTTCGTG TGTCAGTTTAGGTCGACAGCGTCGAGCGAGTTGAGCATCACGTCAACATC GTTTGCATCCAAGACTCTGAGGTACCCGCAAAATATAACCGGGGAAGGTT GCTAGGACAGCGTGCAAAAGATTATCATCCGAGTGCATTGCATAGTATTG CGTTCGTGCGCGTGTGGTGCGAGGACGAGGCGATAATACACCACGACAAG CGACCCTTGCGTTTTGCCTCGTCGTGCGTGCAAACGCCTTTATTATCTAC TTATTACACCCCTGGCAACCAATCTGCGTCTTTTGGAACAGCATTCAGGG CACGGGATAAGCACATCTGTAATACCAATAAGCTATTGAAGCAACGTTAT CCCCGCTGCACCCGGGAAATTCCGGTAAAACGAGGTTATGATACGGTATA AGGCCAACCCTCTCCTTTTTCGCTTTGCTTCCTGTGTCGCAGCTACCACA GTACACGGATCGGCAGACTCTACGCGAGAAGCTGCTTTACTCCATCAGCG CAAACGCGGGCTTCGAGCTCACGTGA
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Coding sequence (CDS) from alignment at S-dermatodea_contig10361:5659..7484-

>mRNA_S-dermatodea_contig10361.268.1 ID=mRNA_S-dermatodea_contig10361.268.1|Name=mRNA_S-dermatodea_contig10361.268.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1140bp|location=Sequence derived from alignment at S-dermatodea_contig10361:5659..7484- (Saccorhiza dermatodea SderLu1190fm monoicous)
GACTTAATTCCCGGAGGGAGGGACGTGGCCGTTACCAATTCATCGGTAAT
TAACTACATACACCTCATGGCGCACTTCAAGCTGAACGTGCAGACCGCCC
GCCCGTGTAAGGCTTTTCTGCAGGGTTTCAGGCACGTCTCGCGGACTTAA
TTCCCGGAGGGAGGGACGTGGCCGTTACCAATTCATCGGTAATTAACTAC
ATACACCTCATGGCGCACTTCAAGCTGAACGTGCAGACCGCCCGCCCGTG
TAAGGCTTTTCTGCAGGGTTTCAGGCACGTCTCGCGGGACTTGATTCCGG
TGGAGTGGATCCGCCTGTTCAACCCCCAGGAGCTTCAGAGGCTTATTGGC
GGAGAGGGAGGGCGCGCGATCGACGTGGAGGACTTGAGACGGAACACTCG
CTACGCGGGGGGATACCACGAGTCGCAGCCCGTCATGCAGGGACTTGATT
CCGGTGGAGTGGATCCGCCTGTTCAACCCCCAGGAGCTTCAGAGGCTTAT
TGGCGGAGAGGGAGGGCGCGCGATCGACGTGGAGGACTTGAGACGGAACA
CTCGCTACGCGGGGGGATACCACGAGTCGCAGCCCGTCATGCAGTGGTTC
TGGGAAGCGATCGAGTCCTTCAACCCAGAGGAGCAGGGGCAATTCCTCAA
GTTCGTGACGTCATGCTCGAGGCCACCGCTGCTGGGATTCGAGCGCCTCC
ATCCGCCCATCTGCTTGCAGCGAGTCCCCGACGGAGAGGATGGGAGGCTA
CCCTCCAGCGCTACGTGCATGAATCTGCTCAAGTGGTTCTGGGAAGCGAT
CGAGTCCTTCAACCCAGAGGAGCAGGGGCAATTCCTCAAGTTCGTGACGT
CATGCTCGAGGCCACCGCTGCTGGGATTCGAGCGCCTCCATCCGCCCATC
TGCTTGCAGCGAGTCCCCGACGGAGAGGATGGGAGGCTACCCTCCAGCGC
TACGTGCATGAATCTGCTCAAGCTACCACAGTACACGGATCGGCAGACTC
TACGCGAGAAGCTGCTTTACTCCATCAGCGCAAACGCGGGCTTCGAGCTC
ACGTGACTACCACAGTACACGGATCGGCAGACTCTACGCGAGAAGCTGCT
TTACTCCATCAGCGCAAACGCGGGCTTCGAGCTCACGTGA
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