mRNA_S-dermatodea_contig1036.263.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig1036.263.1 vs. uniprot
Match: A0A6H5JDQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDQ1_9PHAE) HSP 1 Score: 126 bits (317), Expect = 9.170e-35 Identity = 61/73 (83.56%), Postives = 65/73 (89.04%), Query Frame = 1
Query: 1 IEIIWLLPARAAKEFRRQSAHTICRVLGGDTSLCDEIEQRYARLQSTEEGRAYQNFVMDQGPAKKTRSEAPFW 219
+EIIWLLP+ AAKEFRRQSA TI RVLGGDTSLCDEIEQR RLQSTEEGRAYQ F++DQGPAKK RSE PFW
Sbjct: 138 VEIIWLLPSNAAKEFRRQSAQTITRVLGGDTSLCDEIEQRCDRLQSTEEGRAYQGFLLDQGPAKKQRSEEPFW 210
BLAST of mRNA_S-dermatodea_contig1036.263.1 vs. uniprot
Match: A0A6H5K200_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K200_9PHAE) HSP 1 Score: 119 bits (299), Expect = 3.670e-30 Identity = 58/73 (79.45%), Postives = 63/73 (86.30%), Query Frame = 1
Query: 1 IEIIWLLPARAAKEFRRQSAHTICRVLGGDTSLCDEIEQRYARLQSTEEGRAYQNFVMDQGPAKKTRSEAPFW 219
+EIIWLLP+ +AKEFRRQSA TICRVLGGD SLC EIEQR ARLQSTEEGRAYQ+FV DQGPAKK R+ P W
Sbjct: 227 VEIIWLLPSGSAKEFRRQSAETICRVLGGDISLCGEIEQRCARLQSTEEGRAYQSFVTDQGPAKKQRAAMPAW 299
BLAST of mRNA_S-dermatodea_contig1036.263.1 vs. uniprot
Match: Q8QN79_ESV1K (EsV-1-211 n=2 Tax=root TaxID=1 RepID=Q8QN79_ESV1K) HSP 1 Score: 119 bits (298), Expect = 4.920e-30 Identity = 58/73 (79.45%), Postives = 63/73 (86.30%), Query Frame = 1
Query: 1 IEIIWLLPARAAKEFRRQSAHTICRVLGGDTSLCDEIEQRYARLQSTEEGRAYQNFVMDQGPAKKTRSEAPFW 219
+EIIWLLP+ AAKEFRRQSA TICRVLGGD SLC EIEQR ARL+STEEGRAYQ+FV DQGPAKK R+ P W
Sbjct: 227 VEIIWLLPSGAAKEFRRQSAETICRVLGGDISLCGEIEQRCARLRSTEEGRAYQSFVTDQGPAKKQRAAMPAW 299
BLAST of mRNA_S-dermatodea_contig1036.263.1 vs. uniprot
Match: A0A6H5L5N7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5N7_9PHAE) HSP 1 Score: 116 bits (290), Expect = 1.380e-28 Identity = 57/71 (80.28%), Postives = 62/71 (87.32%), Query Frame = 1
Query: 1 IEIIWLLPARAAKEFRRQSAHTICRVLGGDTSLCDEIEQRYARLQSTEEGRAYQNFVMDQGPAKKTRSEAP 213
+EIIWLLP+ AAKEFRRQSA TICRVLGGD SLC EIEQR ARLQSTEEGRAYQ+F+ DQGPAKK R+ P
Sbjct: 227 VEIIWLLPSGAAKEFRRQSAETICRVLGGDISLCGEIEQRCARLQSTEEGRAYQSFMTDQGPAKKQRAAMP 297
BLAST of mRNA_S-dermatodea_contig1036.263.1 vs. uniprot
Match: D8LPL9_ECTSI (EsV-1-210 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPL9_ECTSI) HSP 1 Score: 101 bits (251), Expect = 2.000e-23 Identity = 52/73 (71.23%), Postives = 59/73 (80.82%), Query Frame = 1
Query: 1 IEIIWLLPARAAKEFRRQSAHTICRVLGGDTSLCDEIEQRYARLQSTEEGRAYQNFVMDQGPAKKTRSEAPFW 219
IEIIWLLPARAA+EFR+QSA TI RVLGGD SLC EIEQR ARLQ+TE+GRAYQ+ + Q P KK +S P W
Sbjct: 242 IEIIWLLPARAAREFRKQSADTIARVLGGDVSLCAEIEQRCARLQNTEDGRAYQSVMTGQAPTKKHKS-LPEW 313
BLAST of mRNA_S-dermatodea_contig1036.263.1 vs. uniprot
Match: Q8QN80_ESV1K (EsV-1-210 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QN80_ESV1K) HSP 1 Score: 100 bits (250), Expect = 2.760e-23 Identity = 52/73 (71.23%), Postives = 59/73 (80.82%), Query Frame = 1
Query: 1 IEIIWLLPARAAKEFRRQSAHTICRVLGGDTSLCDEIEQRYARLQSTEEGRAYQNFVMDQGPAKKTRSEAPFW 219
IEIIWLLPARAA+EFR+QSA TI RVLGGD SLC EIEQR ARLQ+TEEGRAYQ+ + + P KK +S P W
Sbjct: 242 IEIIWLLPARAAREFRKQSADTIARVLGGDVSLCAEIEQRCARLQNTEEGRAYQSVMTGEAPPKKHKS-LPEW 313
BLAST of mRNA_S-dermatodea_contig1036.263.1 vs. uniprot
Match: B5LW93_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LW93_9PHYC) HSP 1 Score: 87.8 bits (216), Expect = 1.160e-18 Identity = 43/66 (65.15%), Postives = 50/66 (75.76%), Query Frame = 1
Query: 4 EIIWLLPARAAKEFRRQSAHTICRVLGGDTSLCDEIEQRYARLQSTEEGRAYQNFVMDQGPAKKTR 201
EIIWLLP RAA+EFRRQSA + RVLGGDT+LC EIE+R LQST EGRA+QNF + +K R
Sbjct: 195 EIIWLLPGRAAREFRRQSAEIVMRVLGGDTTLCKEIEERSVGLQSTREGRAFQNFALGGESGEKKR 260
BLAST of mRNA_S-dermatodea_contig1036.263.1 vs. uniprot
Match: A0A6H5JW74_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW74_9PHAE) HSP 1 Score: 80.9 bits (198), Expect = 3.830e-16 Identity = 37/58 (63.79%), Postives = 47/58 (81.03%), Query Frame = 1
Query: 1 IEIIWLLPARAAKEFRRQSAHTICRVLGGDTSLCDEIEQRYARLQSTEEGRAYQNFVM 174
IEI+WLLP + A+EFRRQS+ +CR+LGGD SL EIE R+A LQSTE+GRA Q F++
Sbjct: 974 IEIVWLLPGKKAREFRRQSSEKVCRLLGGDLSLVSEIEARHATLQSTEQGRATQEFLL 1031
BLAST of mRNA_S-dermatodea_contig1036.263.1 vs. uniprot
Match: A0A835YZ27_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ27_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 7.170e-16 Identity = 35/58 (60.34%), Postives = 45/58 (77.59%), Query Frame = 1
Query: 1 IEIIWLLPARAAKEFRRQSAHTICRVLGGDTSLCDEIEQRYARLQSTEEGRAYQNFVM 174
+EI+W LP +AA+EFRR SA T+CRVLGGD S+ EIE+R+ LQ TE GRA Q F++
Sbjct: 73 VEIVWSLPGKAAREFRRTSAKTVCRVLGGDLSIVQEIEKRHHTLQQTEGGRAAQAFML 130
BLAST of mRNA_S-dermatodea_contig1036.263.1 vs. uniprot
Match: B5LWG0_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWG0_9PHYC) HSP 1 Score: 73.6 bits (179), Expect = 4.220e-15 Identity = 35/73 (47.95%), Postives = 51/73 (69.86%), Query Frame = 1
Query: 1 IEIIWLLPARAAKEFRRQSAHTICRVLGGDTSLCDEIEQRYARLQSTEEGRAYQNFVMDQGPAKKTRSEAPFW 219
+ I++LLP + A++FRR+SA ICR+LGGD +L EIEQ LQST EGRA Q F+++ G ++ +R+ W
Sbjct: 4 VGIVFLLPGKIARDFRRKSAAKICRILGGDLTLISEIEQHRNALQSTSEGRATQAFLLNTGSSENSRNMQECW 76 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1036.263.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1036.263.1 >prot_S-dermatodea_contig1036.263.1 ID=prot_S-dermatodea_contig1036.263.1|Name=mRNA_S-dermatodea_contig1036.263.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=73bp IEIIWLLPARAAKEFRRQSAHTICRVLGGDTSLCDEIEQRYARLQSTEEGback to top mRNA from alignment at S-dermatodea_contig1036:7999..8217+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig1036.263.1 ID=mRNA_S-dermatodea_contig1036.263.1|Name=mRNA_S-dermatodea_contig1036.263.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=219bp|location=Sequence derived from alignment at S-dermatodea_contig1036:7999..8217+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig1036:7999..8217+ >mRNA_S-dermatodea_contig1036.263.1 ID=mRNA_S-dermatodea_contig1036.263.1|Name=mRNA_S-dermatodea_contig1036.263.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=438bp|location=Sequence derived from alignment at S-dermatodea_contig1036:7999..8217+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |