mRNA_S-dermatodea_contig10357.262.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10357.262.1 vs. uniprot
Match: A0A6H5KHI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHI3_9PHAE) HSP 1 Score: 351 bits (901), Expect = 3.690e-116 Identity = 178/210 (84.76%), Postives = 189/210 (90.00%), Query Frame = 1
Query: 1 QSLSALIDSCGDDSLASSGGVRSVFLFDHEEVGSTSCEGAAGTLLPDCMRRIAVALAASPADVVMESVVRKSFLVSADMAHALHPNYIDRHDPALGPKIHSGMVLKHNANQRYATNAVTGFLFRELGSRAGLPTQEFAVKNDSGCGSTIGPTLSALSGIRTVDVGSPQMSMHSIRETMGVDDALHGYRHIKAVLKNFFELDGQLKVDAVP 630
QS+ ALID C D LAS GVRSVFLFDHEEVGSTSC+GAAGTLLPDCM+RIA LAASP+D VME+VVRKSFLVSADMAHALHPNY DRHDPALGPKIHSGMVLKHN NQRYATNAVT F FRELG+RAGLPTQEFAVK+DS CGSTIGPTLSALSGIRTVDVGSPQ+SMHSIRE MG DDA+ GYRHIKAVL+NFFE+DGQL VD P
Sbjct: 150 QSIRALIDGCEGDGLASCKGVRSVFLFDHEEVGSTSCQGAAGTLLPDCMKRIAKGLAASPSDFVMEAVVRKSFLVSADMAHALHPNYQDRHDPALGPKIHSGMVLKHNTNQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSACGSTIGPTLSALSGIRTVDVGSPQLSMHSIREMMGADDAVLGYRHIKAVLENFFEIDGQLVVDGCP 359
BLAST of mRNA_S-dermatodea_contig10357.262.1 vs. uniprot
Match: D8LK99_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK99_ECTSI) HSP 1 Score: 327 bits (837), Expect = 3.000e-105 Identity = 167/198 (84.34%), Postives = 175/198 (88.38%), Query Frame = 1
Query: 1 QSLSALIDSCGDDSLASSGGVRSVFLFDHEEVGSTSCEGAAGTLLPDCMRRIAVALAASPADVVMESVVRKSFLVSADMAHALHPNYIDRHDPALGPKIHSGMVLKHNANQRYATNAVTGFLFRELGSRAGLPTQEFAVKNDSGCGSTIGPTLSALSGIRTVDVGSPQMSMHSIRETMGVDDALHGYRHIKAVLKNFF 594
QS+ ALID C D LAS GVRSVFLFDHEEVGSTSC GAAGTLLPDCM+RIA LAASP+D VME+VVRKSFLVSADMAHALHPNY DRHDPALGPKIHSGMVLKHNANQRYATNAVT F FRELG+RAGLPTQEFAVK+DS CGSTIGPTLSALSGIRTVDVGSPQ+SMHSIRE MG DDA+ GYRHIK V F
Sbjct: 238 QSIRALIDGCEGDGLASCKGVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRIAKGLAASPSDFVMEAVVRKSFLVSADMAHALHPNYQDRHDPALGPKIHSGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSACGSTIGPTLSALSGIRTVDVGSPQLSMHSIREMMGADDAVFGYRHIKGVFVGCF 435
BLAST of mRNA_S-dermatodea_contig10357.262.1 vs. uniprot
Match: A0A096PAP6_OSTTA (Peptidase M18 n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096PAP6_OSTTA) HSP 1 Score: 240 bits (613), Expect = 3.300e-71 Identity = 121/210 (57.62%), Postives = 148/210 (70.48%), Query Frame = 1
Query: 4 SLSALIDSCGDDSLASSGGVRSVFLFDHEEVGSTSCEGAAGTLLPDCMRRIAVALAASPADVVMESVVRKSFLVSADMAHALHPNYIDRHDPALGPKIHSGMVLKHNANQRYATNAVTGFLFRELGSRAGLPTQEFAVKNDSGCGSTIGPTLSALSGIRTVDVGSPQMSMHSIRETMGVDDALHGYRHIKAVLKNFFELDGQLKVDAVPG 633
SL AL+++ DD+LA + GVR + FDHEEVGS S GAAG + D ++RIA AL + + + E R SF VS+DMAHALHPNY DRH+PA PK+H G+V+KHNANQRYAT+AVT F+FRELG R G+P QEF VK+D GCGSTIGP S +GIRTVDVG+ Q+SMHSIRE G DD H +H + NF +LD VD G
Sbjct: 259 SLQALLNASTDDALAGASGVRMIMHFDHEEVGSESTSGAAGAMTTDAIKRIAAALNPNAVEGLDERTRRASFCVSSDMAHALHPNYTDRHEPAHTPKLHGGLVIKHNANQRYATDAVTAFMFRELGERVGVPVQEFVVKSDMGCGSTIGPIFSTRTGIRTVDVGAAQLSMHSIREVCGTDDVEHAIKHFTSTFMNFLDLDRTFIVDGAVG 468
BLAST of mRNA_S-dermatodea_contig10357.262.1 vs. uniprot
Match: A0A7S1XZN9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZN9_9STRA) HSP 1 Score: 240 bits (612), Expect = 4.530e-71 Identity = 133/214 (62.15%), Postives = 159/214 (74.30%), Query Frame = 1
Query: 1 QSLSALIDSCGDDSLASSGGVRSVFLFDHEEVGSTSCEGAAGTLLPDCMRRIAVALAA-SP--ADVVMESVVRKSFLVSADMAHALHPNYIDRHDPALGPKIHSGMVLKHNANQRYATNAVTGFLFRELGSRAGLPTQEFAVKNDSGCGSTIGPTLSALSGIRTVDVGSPQMSMHSIRETMGVDDALHGYRHIKAVLKNFFELDGQLKVDAVPG 633
Q L AL+D+ DSL + GVR V LFDHEEVGS+S GA G +LP+ + RI + SP AD V+ V RKSF VSADMAHA HPNY +RHDP L P IHSG+V+KHNANQRYAT+AVT LFRE ++ G+P QEFAV++DSGCGSTIGP ++L+GIRTVD+GSPQ+SMHSIRE MG DDA +GY IKA +NF E+D L VDA G
Sbjct: 262 QGLRALVDTL--DSLGTDKGVRLVALFDHEEVGSSSSTGAGGPILPNSIARITQGMYGDSPLCAD-VLPRVYRKSFCVSADMAHAQHPNYPERHDPNLNPSIHSGVVIKHNANQRYATSAVTATLFRECCAKGGVPVQEFAVRSDSGCGSTIGPITASLTGIRTVDIGSPQLSMHSIREIMGTDDAYYGYAAIKACFENFNEIDEGLTVDAGRG 472
BLAST of mRNA_S-dermatodea_contig10357.262.1 vs. uniprot
Match: A4S7N7_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S7N7_OSTLU) HSP 1 Score: 240 bits (612), Expect = 6.390e-71 Identity = 121/210 (57.62%), Postives = 153/210 (72.86%), Query Frame = 1
Query: 4 SLSALIDSCGDDSLASSGGVRSVFLFDHEEVGSTSCEGAAGTLLPDCMRRIAVALAASPADVVMESVVRKSFLVSADMAHALHPNYIDRHDPALGPKIHSGMVLKHNANQRYATNAVTGFLFRELGSRAGLPTQEFAVKNDSGCGSTIGPTLSALSGIRTVDVGSPQMSMHSIRETMGVDDALHGYRHIKAVLKNFFELDGQLKVDAVPG 633
SL AL+++ D++LA + GVR + FDHEEVGS S GAAG + D ++RIA AL+ + + E R SF VS+DMAHALHPNY DRH+PA PK+H G+V+KHNANQRYAT+AVT F+FRE+G RAG+P QEF V++D+GCGSTIGP S +GIRTVDVG+ Q+SMHSIRE G DD H +H+ AV +F +LD L VD G
Sbjct: 270 SLHALMNASTDEALADARGVRMIMHFDHEEVGSESSSGAAGAMTTDAIKRIAAALSQGSVEGLDERTRRASFCVSSDMAHALHPNYADRHEPAHAPKMHGGLVIKHNANQRYATDAVTAFMFREIGERAGVPVQEFVVRSDTGCGSTIGPIFSTRTGIRTVDVGAAQLSMHSIREVCGADDIDHAVKHLTAVYLHFIDLDRTLIVDGAIG 479
BLAST of mRNA_S-dermatodea_contig10357.262.1 vs. uniprot
Match: A0A7R9U6Z2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6Z2_9STRA) HSP 1 Score: 239 bits (610), Expect = 1.570e-70 Identity = 129/218 (59.17%), Postives = 159/218 (72.94%), Query Frame = 1
Query: 1 QSLSALIDSCGDDSLASSGGVRSVFLFDHEEVGSTSCEGAAGTLLPDCMRRIAVALAAS----PADVVMESVVRKSFLVSADMAHALHPNYIDRHDPALGPKIHSGMVLKHNANQRYATNAVTGFLFRELGSRAGLPTQEFAVKNDSGCGSTIGPTLSALSGIRTVDVGSPQMSMHSIRETMGVDDALHGYRHIKAVLKNFFELDGQLKVDAVP-GVP 639
QSL AL+DS D+L VR++ LFD+EEVGS+S GA G +LPD ++RI L PAD ++ V+RKSF VSADMAHA HPNY +RHDPAL PKIH G+VLKHN NQRYA++AVT +FR+ + LP QEFA ++D+GCGSTIGP +AL+G+RTVD+GSPQ+SMHS+RE MG DDA HGYR +KA NF +D LKVD P GVP
Sbjct: 255 QSLRALVDSL--DTLPEEPNVRAIALFDNEEVGSSSIAGAQGPILPDAIKRIVHGLHGGDQGLPAD-LLPRVIRKSFCVSADMAHAHHPNYPERHDPALAPKIHGGIVLKHNPNQRYASSAVTSTIFRQCCLKEDLPFQEFATRSDTGCGSTIGPITAALTGMRTVDIGSPQLSMHSVREMMGADDAEHGYRALKAFFNNFSSVDRTLKVDKAPNGVP 469
BLAST of mRNA_S-dermatodea_contig10357.262.1 vs. uniprot
Match: J3NCD2_ORYBR (Uncharacterized protein n=12 Tax=Poaceae TaxID=4479 RepID=J3NCD2_ORYBR) HSP 1 Score: 237 bits (605), Expect = 2.700e-70 Identity = 120/206 (58.25%), Postives = 150/206 (72.82%), Query Frame = 1
Query: 4 SLSALIDSCGDDSLASSGGVRSVFLFDHEEVGSTSCEGAAGTLLPDCMRRIAVALAASPADVVMESVVRKSFLVSADMAHALHPNYIDRHDPALGPKIHSGMVLKHNANQRYATNAVTGFLFRELGSRAGLPTQEFAVKNDSGCGSTIGPTLSALSGIRTVDVGSPQMSMHSIRETMGVDDALHGYRHIKAVLKNFFELDGQLKVD 621
SL ALIDS +DSLA GVR V LFDHEEVGS S +GA + D + RI + +S A ++E +++SFLVSADMAHALHPNY+D+H+ PK+H G+V+KHNANQRYATNAVT F+FRE+ LP Q+F V+ND GCGSTIGP L++ GIRTVD+G+PQ+SMHSIRE VDD H Y H KA + F ELD +++VD
Sbjct: 269 SLKALIDSTSEDSLAHESGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITGSFNSSNAR-LLEKAIQRSFLVSADMAHALHPNYMDKHEENHQPKLHGGLVIKHNANQRYATNAVTAFIFREIAENHHLPVQDFVVRNDMGCGSTIGPILASGVGIRTVDIGAPQLSMHSIREMCAVDDVSHSYEHFKAYFEEFTELDSKVRVD 473
BLAST of mRNA_S-dermatodea_contig10357.262.1 vs. uniprot
Match: A0A0D6R3V7_ARACU (Uncharacterized protein n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6R3V7_ARACU) HSP 1 Score: 237 bits (604), Expect = 5.270e-70 Identity = 118/207 (57.00%), Postives = 153/207 (73.91%), Query Frame = 1
Query: 4 SLSALIDS-CGDDSLASSGGVRSVFLFDHEEVGSTSCEGAAGTLLPDCMRRIAVALAASPADVVMESVVRKSFLVSADMAHALHPNYIDRHDPALGPKIHSGMVLKHNANQRYATNAVTGFLFRELGSRAGLPTQEFAVKNDSGCGSTIGPTLSALSGIRTVDVGSPQMSMHSIRETMGVDDALHGYRHIKAVLKNFFELDGQLKVD 621
SL AL+D+ + L GVR V LFDHEEVGS S +GA ++ D + R+ +++ S + V +E V++KSFLVSADMAH LHPNY+DRH+ PK+H G+V+KHNANQRYATNAVT F+FRE+G LP Q+F V+ND CGSTIGP L++ GIRTVD+G+PQ+SMHSIRE GVDD +H Y+H+KA + F +LD Q+KVD
Sbjct: 280 SLKALLDATAAKELLQDETGVRMVALFDHEEVGSNSAQGAGSPVMLDALTRVTSSMSESDSKVSLEKVIQKSFLVSADMAHCLHPNYMDRHEENHQPKMHKGLVIKHNANQRYATNAVTSFIFREIGKMHKLPIQDFVVRNDMPCGSTIGPILASGVGIRTVDIGAPQLSMHSIREMCGVDDVVHSYQHLKAYFEEFTKLDSQIKVD 486
BLAST of mRNA_S-dermatodea_contig10357.262.1 vs. uniprot
Match: A0A3S6N245_9SPER (Zn-dependent exopeptidases superfamily protein n=18 Tax=Cupressaceae TaxID=3367 RepID=A0A3S6N245_9SPER) HSP 1 Score: 236 bits (602), Expect = 1.300e-69 Identity = 117/207 (56.52%), Postives = 155/207 (74.88%), Query Frame = 1
Query: 4 SLSALID-SCGDDSLASSGGVRSVFLFDHEEVGSTSCEGAAGTLLPDCMRRIAVALAASPADVVMESVVRKSFLVSADMAHALHPNYIDRHDPALGPKIHSGMVLKHNANQRYATNAVTGFLFRELGSRAGLPTQEFAVKNDSGCGSTIGPTLSALSGIRTVDVGSPQMSMHSIRETMGVDDALHGYRHIKAVLKNFFELDGQLKVD 621
SL AL+D + ++SL GVR V LFDHEEVGS S +GA ++ D RI +L+A + V +E V+++SFLVSADMAH LHPNY+D+H+ P++H+G+V+K+NANQRYATNAVT F+FRE+G + +P Q+F V+ND GCGSTIGP L++ GIRTVDVG+PQ+SMHSIRE GVDD ++ Y H+KA + F LD Q+KVD
Sbjct: 289 SLKALLDGTASEESLQDETGVRMVALFDHEEVGSNSAQGAGSPVMLDAFSRITSSLSAHGSKVSLEKVIQRSFLVSADMAHCLHPNYMDKHEDNHQPRMHNGLVIKNNANQRYATNAVTSFIFREIGKKHKIPVQDFVVRNDMGCGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCGVDDVIYSYEHLKAYFEEFTNLDSQIKVD 495
BLAST of mRNA_S-dermatodea_contig10357.262.1 vs. uniprot
Match: W1NDQ7_AMBTC (Uncharacterized protein n=1 Tax=Amborella trichopoda TaxID=13333 RepID=W1NDQ7_AMBTC) HSP 1 Score: 229 bits (583), Expect = 1.460e-68 Identity = 116/206 (56.31%), Postives = 148/206 (71.84%), Query Frame = 1
Query: 4 SLSALIDSCGDDSLASSGGVRSVFLFDHEEVGSTSCEGAAGTLLPDCMRRIAVALAASPADVVMESVVRKSFLVSADMAHALHPNYIDRHDPALGPKIHSGMVLKHNANQRYATNAVTGFLFRELGSRAGLPTQEFAVKNDSGCGSTIGPTLSALSGIRTVDVGSPQMSMHSIRETMGVDDALHGYRHIKAVLKNFFELDGQLKVD 621
SL AL DS + SLA+ GVR V LFDHEEVGS S +GA ++ D + RI + +S + V+E V++SFLVSADMAHALHPNY+D+H+ P++H G+V+KHNANQRYA+N+VT F+FRE+ + LP QEF V+ND CGSTIGP L++ GIRTVDVG+PQ+SMHSIRE VDD H Y H KA F +LD ++ VD
Sbjct: 139 SLRALFDSTAEGSLANETGVRMVALFDHEEVGSDSAQGAGSPIILDALARITNSFCSSGSK-VLEKAVQRSFLVSADMAHALHPNYMDKHEENHQPRLHGGLVIKHNANQRYASNSVTSFIFREIAKQHKLPVQEFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCSVDDVKHSYEHFKAFFHEFAQLDAKISVD 343 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10357.262.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10357.262.1 >prot_S-dermatodea_contig10357.262.1 ID=prot_S-dermatodea_contig10357.262.1|Name=mRNA_S-dermatodea_contig10357.262.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=166bp MRRIAVALAASPADVVMESVVRKSFLVSADMAHALHPNYIDRHDPALGPKback to top mRNA from alignment at S-dermatodea_contig10357:123..3598- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10357.262.1 ID=mRNA_S-dermatodea_contig10357.262.1|Name=mRNA_S-dermatodea_contig10357.262.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3476bp|location=Sequence derived from alignment at S-dermatodea_contig10357:123..3598- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10357:123..3598- >mRNA_S-dermatodea_contig10357.262.1 ID=mRNA_S-dermatodea_contig10357.262.1|Name=mRNA_S-dermatodea_contig10357.262.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=996bp|location=Sequence derived from alignment at S-dermatodea_contig10357:123..3598- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |