mRNA_S-dermatodea_contig10357.262.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig10357.262.1
Unique NamemRNA_S-dermatodea_contig10357.262.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig10357.262.1 vs. uniprot
Match: A0A6H5KHI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHI3_9PHAE)

HSP 1 Score: 351 bits (901), Expect = 3.690e-116
Identity = 178/210 (84.76%), Postives = 189/210 (90.00%), Query Frame = 1
Query:    1 QSLSALIDSCGDDSLASSGGVRSVFLFDHEEVGSTSCEGAAGTLLPDCMRRIAVALAASPADVVMESVVRKSFLVSADMAHALHPNYIDRHDPALGPKIHSGMVLKHNANQRYATNAVTGFLFRELGSRAGLPTQEFAVKNDSGCGSTIGPTLSALSGIRTVDVGSPQMSMHSIRETMGVDDALHGYRHIKAVLKNFFELDGQLKVDAVP 630
            QS+ ALID C  D LAS  GVRSVFLFDHEEVGSTSC+GAAGTLLPDCM+RIA  LAASP+D VME+VVRKSFLVSADMAHALHPNY DRHDPALGPKIHSGMVLKHN NQRYATNAVT F FRELG+RAGLPTQEFAVK+DS CGSTIGPTLSALSGIRTVDVGSPQ+SMHSIRE MG DDA+ GYRHIKAVL+NFFE+DGQL VD  P
Sbjct:  150 QSIRALIDGCEGDGLASCKGVRSVFLFDHEEVGSTSCQGAAGTLLPDCMKRIAKGLAASPSDFVMEAVVRKSFLVSADMAHALHPNYQDRHDPALGPKIHSGMVLKHNTNQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSACGSTIGPTLSALSGIRTVDVGSPQLSMHSIREMMGADDAVLGYRHIKAVLENFFEIDGQLVVDGCP 359          
BLAST of mRNA_S-dermatodea_contig10357.262.1 vs. uniprot
Match: D8LK99_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK99_ECTSI)

HSP 1 Score: 327 bits (837), Expect = 3.000e-105
Identity = 167/198 (84.34%), Postives = 175/198 (88.38%), Query Frame = 1
Query:    1 QSLSALIDSCGDDSLASSGGVRSVFLFDHEEVGSTSCEGAAGTLLPDCMRRIAVALAASPADVVMESVVRKSFLVSADMAHALHPNYIDRHDPALGPKIHSGMVLKHNANQRYATNAVTGFLFRELGSRAGLPTQEFAVKNDSGCGSTIGPTLSALSGIRTVDVGSPQMSMHSIRETMGVDDALHGYRHIKAVLKNFF 594
            QS+ ALID C  D LAS  GVRSVFLFDHEEVGSTSC GAAGTLLPDCM+RIA  LAASP+D VME+VVRKSFLVSADMAHALHPNY DRHDPALGPKIHSGMVLKHNANQRYATNAVT F FRELG+RAGLPTQEFAVK+DS CGSTIGPTLSALSGIRTVDVGSPQ+SMHSIRE MG DDA+ GYRHIK V    F
Sbjct:  238 QSIRALIDGCEGDGLASCKGVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRIAKGLAASPSDFVMEAVVRKSFLVSADMAHALHPNYQDRHDPALGPKIHSGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSACGSTIGPTLSALSGIRTVDVGSPQLSMHSIREMMGADDAVFGYRHIKGVFVGCF 435          
BLAST of mRNA_S-dermatodea_contig10357.262.1 vs. uniprot
Match: A0A096PAP6_OSTTA (Peptidase M18 n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096PAP6_OSTTA)

HSP 1 Score: 240 bits (613), Expect = 3.300e-71
Identity = 121/210 (57.62%), Postives = 148/210 (70.48%), Query Frame = 1
Query:    4 SLSALIDSCGDDSLASSGGVRSVFLFDHEEVGSTSCEGAAGTLLPDCMRRIAVALAASPADVVMESVVRKSFLVSADMAHALHPNYIDRHDPALGPKIHSGMVLKHNANQRYATNAVTGFLFRELGSRAGLPTQEFAVKNDSGCGSTIGPTLSALSGIRTVDVGSPQMSMHSIRETMGVDDALHGYRHIKAVLKNFFELDGQLKVDAVPG 633
            SL AL+++  DD+LA + GVR +  FDHEEVGS S  GAAG +  D ++RIA AL  +  + + E   R SF VS+DMAHALHPNY DRH+PA  PK+H G+V+KHNANQRYAT+AVT F+FRELG R G+P QEF VK+D GCGSTIGP  S  +GIRTVDVG+ Q+SMHSIRE  G DD  H  +H  +   NF +LD    VD   G
Sbjct:  259 SLQALLNASTDDALAGASGVRMIMHFDHEEVGSESTSGAAGAMTTDAIKRIAAALNPNAVEGLDERTRRASFCVSSDMAHALHPNYTDRHEPAHTPKLHGGLVIKHNANQRYATDAVTAFMFRELGERVGVPVQEFVVKSDMGCGSTIGPIFSTRTGIRTVDVGAAQLSMHSIREVCGTDDVEHAIKHFTSTFMNFLDLDRTFIVDGAVG 468          
BLAST of mRNA_S-dermatodea_contig10357.262.1 vs. uniprot
Match: A0A7S1XZN9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZN9_9STRA)

HSP 1 Score: 240 bits (612), Expect = 4.530e-71
Identity = 133/214 (62.15%), Postives = 159/214 (74.30%), Query Frame = 1
Query:    1 QSLSALIDSCGDDSLASSGGVRSVFLFDHEEVGSTSCEGAAGTLLPDCMRRIAVALAA-SP--ADVVMESVVRKSFLVSADMAHALHPNYIDRHDPALGPKIHSGMVLKHNANQRYATNAVTGFLFRELGSRAGLPTQEFAVKNDSGCGSTIGPTLSALSGIRTVDVGSPQMSMHSIRETMGVDDALHGYRHIKAVLKNFFELDGQLKVDAVPG 633
            Q L AL+D+   DSL +  GVR V LFDHEEVGS+S  GA G +LP+ + RI   +   SP  AD V+  V RKSF VSADMAHA HPNY +RHDP L P IHSG+V+KHNANQRYAT+AVT  LFRE  ++ G+P QEFAV++DSGCGSTIGP  ++L+GIRTVD+GSPQ+SMHSIRE MG DDA +GY  IKA  +NF E+D  L VDA  G
Sbjct:  262 QGLRALVDTL--DSLGTDKGVRLVALFDHEEVGSSSSTGAGGPILPNSIARITQGMYGDSPLCAD-VLPRVYRKSFCVSADMAHAQHPNYPERHDPNLNPSIHSGVVIKHNANQRYATSAVTATLFRECCAKGGVPVQEFAVRSDSGCGSTIGPITASLTGIRTVDIGSPQLSMHSIREIMGTDDAYYGYAAIKACFENFNEIDEGLTVDAGRG 472          
BLAST of mRNA_S-dermatodea_contig10357.262.1 vs. uniprot
Match: A4S7N7_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S7N7_OSTLU)

HSP 1 Score: 240 bits (612), Expect = 6.390e-71
Identity = 121/210 (57.62%), Postives = 153/210 (72.86%), Query Frame = 1
Query:    4 SLSALIDSCGDDSLASSGGVRSVFLFDHEEVGSTSCEGAAGTLLPDCMRRIAVALAASPADVVMESVVRKSFLVSADMAHALHPNYIDRHDPALGPKIHSGMVLKHNANQRYATNAVTGFLFRELGSRAGLPTQEFAVKNDSGCGSTIGPTLSALSGIRTVDVGSPQMSMHSIRETMGVDDALHGYRHIKAVLKNFFELDGQLKVDAVPG 633
            SL AL+++  D++LA + GVR +  FDHEEVGS S  GAAG +  D ++RIA AL+    + + E   R SF VS+DMAHALHPNY DRH+PA  PK+H G+V+KHNANQRYAT+AVT F+FRE+G RAG+P QEF V++D+GCGSTIGP  S  +GIRTVDVG+ Q+SMHSIRE  G DD  H  +H+ AV  +F +LD  L VD   G
Sbjct:  270 SLHALMNASTDEALADARGVRMIMHFDHEEVGSESSSGAAGAMTTDAIKRIAAALSQGSVEGLDERTRRASFCVSSDMAHALHPNYADRHEPAHAPKMHGGLVIKHNANQRYATDAVTAFMFREIGERAGVPVQEFVVRSDTGCGSTIGPIFSTRTGIRTVDVGAAQLSMHSIREVCGADDIDHAVKHLTAVYLHFIDLDRTLIVDGAIG 479          
BLAST of mRNA_S-dermatodea_contig10357.262.1 vs. uniprot
Match: A0A7R9U6Z2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6Z2_9STRA)

HSP 1 Score: 239 bits (610), Expect = 1.570e-70
Identity = 129/218 (59.17%), Postives = 159/218 (72.94%), Query Frame = 1
Query:    1 QSLSALIDSCGDDSLASSGGVRSVFLFDHEEVGSTSCEGAAGTLLPDCMRRIAVALAAS----PADVVMESVVRKSFLVSADMAHALHPNYIDRHDPALGPKIHSGMVLKHNANQRYATNAVTGFLFRELGSRAGLPTQEFAVKNDSGCGSTIGPTLSALSGIRTVDVGSPQMSMHSIRETMGVDDALHGYRHIKAVLKNFFELDGQLKVDAVP-GVP 639
            QSL AL+DS   D+L     VR++ LFD+EEVGS+S  GA G +LPD ++RI   L       PAD ++  V+RKSF VSADMAHA HPNY +RHDPAL PKIH G+VLKHN NQRYA++AVT  +FR+   +  LP QEFA ++D+GCGSTIGP  +AL+G+RTVD+GSPQ+SMHS+RE MG DDA HGYR +KA   NF  +D  LKVD  P GVP
Sbjct:  255 QSLRALVDSL--DTLPEEPNVRAIALFDNEEVGSSSIAGAQGPILPDAIKRIVHGLHGGDQGLPAD-LLPRVIRKSFCVSADMAHAHHPNYPERHDPALAPKIHGGIVLKHNPNQRYASSAVTSTIFRQCCLKEDLPFQEFATRSDTGCGSTIGPITAALTGMRTVDIGSPQLSMHSVREMMGADDAEHGYRALKAFFNNFSSVDRTLKVDKAPNGVP 469          
BLAST of mRNA_S-dermatodea_contig10357.262.1 vs. uniprot
Match: J3NCD2_ORYBR (Uncharacterized protein n=12 Tax=Poaceae TaxID=4479 RepID=J3NCD2_ORYBR)

HSP 1 Score: 237 bits (605), Expect = 2.700e-70
Identity = 120/206 (58.25%), Postives = 150/206 (72.82%), Query Frame = 1
Query:    4 SLSALIDSCGDDSLASSGGVRSVFLFDHEEVGSTSCEGAAGTLLPDCMRRIAVALAASPADVVMESVVRKSFLVSADMAHALHPNYIDRHDPALGPKIHSGMVLKHNANQRYATNAVTGFLFRELGSRAGLPTQEFAVKNDSGCGSTIGPTLSALSGIRTVDVGSPQMSMHSIRETMGVDDALHGYRHIKAVLKNFFELDGQLKVD 621
            SL ALIDS  +DSLA   GVR V LFDHEEVGS S +GA    + D + RI  +  +S A  ++E  +++SFLVSADMAHALHPNY+D+H+    PK+H G+V+KHNANQRYATNAVT F+FRE+     LP Q+F V+ND GCGSTIGP L++  GIRTVD+G+PQ+SMHSIRE   VDD  H Y H KA  + F ELD +++VD
Sbjct:  269 SLKALIDSTSEDSLAHESGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITGSFNSSNAR-LLEKAIQRSFLVSADMAHALHPNYMDKHEENHQPKLHGGLVIKHNANQRYATNAVTAFIFREIAENHHLPVQDFVVRNDMGCGSTIGPILASGVGIRTVDIGAPQLSMHSIREMCAVDDVSHSYEHFKAYFEEFTELDSKVRVD 473          
BLAST of mRNA_S-dermatodea_contig10357.262.1 vs. uniprot
Match: A0A0D6R3V7_ARACU (Uncharacterized protein n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6R3V7_ARACU)

HSP 1 Score: 237 bits (604), Expect = 5.270e-70
Identity = 118/207 (57.00%), Postives = 153/207 (73.91%), Query Frame = 1
Query:    4 SLSALIDS-CGDDSLASSGGVRSVFLFDHEEVGSTSCEGAAGTLLPDCMRRIAVALAASPADVVMESVVRKSFLVSADMAHALHPNYIDRHDPALGPKIHSGMVLKHNANQRYATNAVTGFLFRELGSRAGLPTQEFAVKNDSGCGSTIGPTLSALSGIRTVDVGSPQMSMHSIRETMGVDDALHGYRHIKAVLKNFFELDGQLKVD 621
            SL AL+D+    + L    GVR V LFDHEEVGS S +GA   ++ D + R+  +++ S + V +E V++KSFLVSADMAH LHPNY+DRH+    PK+H G+V+KHNANQRYATNAVT F+FRE+G    LP Q+F V+ND  CGSTIGP L++  GIRTVD+G+PQ+SMHSIRE  GVDD +H Y+H+KA  + F +LD Q+KVD
Sbjct:  280 SLKALLDATAAKELLQDETGVRMVALFDHEEVGSNSAQGAGSPVMLDALTRVTSSMSESDSKVSLEKVIQKSFLVSADMAHCLHPNYMDRHEENHQPKMHKGLVIKHNANQRYATNAVTSFIFREIGKMHKLPIQDFVVRNDMPCGSTIGPILASGVGIRTVDIGAPQLSMHSIREMCGVDDVVHSYQHLKAYFEEFTKLDSQIKVD 486          
BLAST of mRNA_S-dermatodea_contig10357.262.1 vs. uniprot
Match: A0A3S6N245_9SPER (Zn-dependent exopeptidases superfamily protein n=18 Tax=Cupressaceae TaxID=3367 RepID=A0A3S6N245_9SPER)

HSP 1 Score: 236 bits (602), Expect = 1.300e-69
Identity = 117/207 (56.52%), Postives = 155/207 (74.88%), Query Frame = 1
Query:    4 SLSALID-SCGDDSLASSGGVRSVFLFDHEEVGSTSCEGAAGTLLPDCMRRIAVALAASPADVVMESVVRKSFLVSADMAHALHPNYIDRHDPALGPKIHSGMVLKHNANQRYATNAVTGFLFRELGSRAGLPTQEFAVKNDSGCGSTIGPTLSALSGIRTVDVGSPQMSMHSIRETMGVDDALHGYRHIKAVLKNFFELDGQLKVD 621
            SL AL+D +  ++SL    GVR V LFDHEEVGS S +GA   ++ D   RI  +L+A  + V +E V+++SFLVSADMAH LHPNY+D+H+    P++H+G+V+K+NANQRYATNAVT F+FRE+G +  +P Q+F V+ND GCGSTIGP L++  GIRTVDVG+PQ+SMHSIRE  GVDD ++ Y H+KA  + F  LD Q+KVD
Sbjct:  289 SLKALLDGTASEESLQDETGVRMVALFDHEEVGSNSAQGAGSPVMLDAFSRITSSLSAHGSKVSLEKVIQRSFLVSADMAHCLHPNYMDKHEDNHQPRMHNGLVIKNNANQRYATNAVTSFIFREIGKKHKIPVQDFVVRNDMGCGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCGVDDVIYSYEHLKAYFEEFTNLDSQIKVD 495          
BLAST of mRNA_S-dermatodea_contig10357.262.1 vs. uniprot
Match: W1NDQ7_AMBTC (Uncharacterized protein n=1 Tax=Amborella trichopoda TaxID=13333 RepID=W1NDQ7_AMBTC)

HSP 1 Score: 229 bits (583), Expect = 1.460e-68
Identity = 116/206 (56.31%), Postives = 148/206 (71.84%), Query Frame = 1
Query:    4 SLSALIDSCGDDSLASSGGVRSVFLFDHEEVGSTSCEGAAGTLLPDCMRRIAVALAASPADVVMESVVRKSFLVSADMAHALHPNYIDRHDPALGPKIHSGMVLKHNANQRYATNAVTGFLFRELGSRAGLPTQEFAVKNDSGCGSTIGPTLSALSGIRTVDVGSPQMSMHSIRETMGVDDALHGYRHIKAVLKNFFELDGQLKVD 621
            SL AL DS  + SLA+  GVR V LFDHEEVGS S +GA   ++ D + RI  +  +S +  V+E  V++SFLVSADMAHALHPNY+D+H+    P++H G+V+KHNANQRYA+N+VT F+FRE+  +  LP QEF V+ND  CGSTIGP L++  GIRTVDVG+PQ+SMHSIRE   VDD  H Y H KA    F +LD ++ VD
Sbjct:  139 SLRALFDSTAEGSLANETGVRMVALFDHEEVGSDSAQGAGSPIILDALARITNSFCSSGSK-VLEKAVQRSFLVSADMAHALHPNYMDKHEENHQPRLHGGLVIKHNANQRYASNSVTSFIFREIAKQHKLPVQEFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCSVDDVKHSYEHFKAFFHEFAQLDAKISVD 343          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10357.262.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KHI3_9PHAE3.690e-11684.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LK99_ECTSI3.000e-10584.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A096PAP6_OSTTA3.300e-7157.62Peptidase M18 n=1 Tax=Ostreococcus tauri TaxID=704... [more]
A0A7S1XZN9_9STRA4.530e-7162.15Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A4S7N7_OSTLU6.390e-7157.62Uncharacterized protein n=1 Tax=Ostreococcus lucim... [more]
A0A7R9U6Z2_9STRA1.570e-7059.17Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
J3NCD2_ORYBR2.700e-7058.25Uncharacterized protein n=12 Tax=Poaceae TaxID=447... [more]
A0A0D6R3V7_ARACU5.270e-7057.00Uncharacterized protein n=2 Tax=Araucariaceae TaxI... [more]
A0A3S6N245_9SPER1.300e-6956.52Zn-dependent exopeptidases superfamily protein n=1... [more]
W1NDQ7_AMBTC1.460e-6856.31Uncharacterized protein n=1 Tax=Amborella trichopo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10357contigS-dermatodea_contig10357:123..3598 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score251.9
Seed ortholog evalue2.1e-64
Seed eggNOG ortholog2880.D8LK99
KEGG koko:K01267
EggNOG free text desc.aminopeptidase activity
EggNOG OGsCOG1362@1,KOG2596@2759
EC3.4.11.21
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPeptidase M18
Ec32 orthologEc-16_002630.2
Exons5
Model size1172
Cds size498
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924153.2773044-UTR-S-dermatodea_contig10357:122..6521622924153.2773044-UTR-S-dermatodea_contig10357:122..652Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10357 123..652 -
1694079054.0734892-UTR-S-dermatodea_contig10357:122..6521694079054.0734892-UTR-S-dermatodea_contig10357:122..652Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10357 123..652 -
1622924153.3338208-UTR-S-dermatodea_contig10357:3454..35981622924153.3338208-UTR-S-dermatodea_contig10357:3454..3598Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10357 3455..3598 -
1694079054.1319184-UTR-S-dermatodea_contig10357:3454..35981694079054.1319184-UTR-S-dermatodea_contig10357:3454..3598Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10357 3455..3598 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924153.2863824-CDS-S-dermatodea_contig10357:652..7211622924153.2863824-CDS-S-dermatodea_contig10357:652..721Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10357 653..721 -
1694079054.08406-CDS-S-dermatodea_contig10357:652..7211694079054.08406-CDS-S-dermatodea_contig10357:652..721Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10357 653..721 -
1622924153.2950597-CDS-S-dermatodea_contig10357:2054..22131622924153.2950597-CDS-S-dermatodea_contig10357:2054..2213Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10357 2055..2213 -
1694079054.0926998-CDS-S-dermatodea_contig10357:2054..22131694079054.0926998-CDS-S-dermatodea_contig10357:2054..2213Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10357 2055..2213 -
1622924153.308476-CDS-S-dermatodea_contig10357:2659..28581622924153.308476-CDS-S-dermatodea_contig10357:2659..2858Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10357 2660..2858 -
1694079054.102306-CDS-S-dermatodea_contig10357:2659..28581694079054.102306-CDS-S-dermatodea_contig10357:2659..2858Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10357 2660..2858 -
1622924153.3182206-CDS-S-dermatodea_contig10357:3122..31851622924153.3182206-CDS-S-dermatodea_contig10357:3122..3185Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10357 3123..3185 -
1694079054.1116607-CDS-S-dermatodea_contig10357:3122..31851694079054.1116607-CDS-S-dermatodea_contig10357:3122..3185Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10357 3123..3185 -
1622924153.3264112-CDS-S-dermatodea_contig10357:3446..34541622924153.3264112-CDS-S-dermatodea_contig10357:3446..3454Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10357 3447..3454 -
1694079054.1220858-CDS-S-dermatodea_contig10357:3446..34541694079054.1220858-CDS-S-dermatodea_contig10357:3446..3454Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10357 3447..3454 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10357.262.1prot_S-dermatodea_contig10357.262.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig10357 653..3454 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig10357.262.1

>prot_S-dermatodea_contig10357.262.1 ID=prot_S-dermatodea_contig10357.262.1|Name=mRNA_S-dermatodea_contig10357.262.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=166bp
MRRIAVALAASPADVVMESVVRKSFLVSADMAHALHPNYIDRHDPALGPK
IHSGMVLKHNANQRYATNAVTGFLFRELGSRAGLPTQEFAVKNDSGCGST
IGPTLSALSGIRTVDVGSPQMSMHSIRETMGVDDALHGYRHIKAVLKNFF
ELDGQLKVDAVPGVP*
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mRNA from alignment at S-dermatodea_contig10357:123..3598-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig10357.262.1 ID=mRNA_S-dermatodea_contig10357.262.1|Name=mRNA_S-dermatodea_contig10357.262.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3476bp|location=Sequence derived from alignment at S-dermatodea_contig10357:123..3598- (Saccorhiza dermatodea SderLu1190fm monoicous)
CAGTCCCTCAGCGCCTTGATCGACAGCTGCGGCGATGACAGCCTCGCTTC CTCTGGCGGGGTGCGCTCTGTGTTTCTCTTCGACCACGAAGAGGTCGGGA GCACCTCCTGCGAGGGGGCAGCGGGAACCCTTCTCCCAGACTGCATGAGG AGGTGAGCTTCCCTCGTGTCGCGCGCTTGCGCCGAGCTTGCGCTGCGCGG CGTTCGTGATAGCGTTATTTTCGTGCCCACGCGACGCGACGCGACGCGAC GCCGCTTCCACCCCCGTTTGCGGGGAAGAAATGGAGCACGCAAGAAAAAA GGGCAAAACAAAATCATTGCAGGAAAAATCGTGGGCGTTGCCTCGGCTGT GTTTCTCCCATGCCCTTGATTGTACCACCCCCCTTTCCCTTCGGTGCGTT CGGTTTTGCCCAGGATCGCGGTCGCTCTGGCGGCGTCCCCCGCGGACGTT GTGATGGAGAGCGTCGTGAGAAAGAGGTAAGAGCGCCGGGCGCGAGATAC AGCTCCCTCTGTAAACGTTATAATGATTGAAAGCTCACACCACAAGAGTT AGCGCTGGGGTCTCGCCTTTTAAAAGGAATATAGGTGGTTCAAGCAACAC CAACGAAGGCTTCTGTTACGAACGATGCTATAGGATTATTGTGCAAACGT CATTATCTGGGAGATAGCTTGGTAGAGTCGTTTTGATGCCCTTTGTGAGA CCGGAACCCCCCCCCCCCCCTCCCCTACCCCCCCCCGCAGCTTCCTAGTC TCTGCCGATATGGCGCACGCGTTGCACCCCAACTACATTGATCGCCACGA CCCAGCGCTTGGGCCCAAGATCCACTCCGGCATGGTTCTAAAGCACAACG CTAACCAGCGGTACGCGACAAATGCCGTTACCGGCTTCCTCTTCAGGGAG CTGGGTTCCCGCGCGGGTTTGCCGACGCAGGAGTTCGCGGTGAGTTTTTT TTTATATATTGGGACAATGAGGAGATCCTGCTTTTTTTTTTTCCCTCTTG TTTTTATCGTTTTTCCTCTTTTTTTTTTGTTTCTCCTCCTGTTTTTGTTT TCCTGTTTTGTTTTGTTTTGTTTTGTTTCTCCTATCATAATACAGTACAA ACCTGTATACACGTATTATTTGTTTTTCCTCGCCCTACTGCTGTATCCCA GCCGAGGTCGCAAGGATAAAATTGAGCCAATCAATGTGTATACATATGTA CATCATATATACATACAACCAGCGGACAATCACCGAGAGCAGAAACTCAA CATGGTTGGAAACCCCCGCGCTAAGGCTGTACATCATAGGAGGAAATACA ACGTATATTACATTGGTGGTTCAAAGCAAACACATCCCATCGAAACAACG ACTCGACGTGTATGTCATACTTGTACGTGAAACAGGTGAAAAACGACTCT GGCTGCGGGAGCACCATCGGCCCCACCCTCTCCGCCCTGTCGGGCATCCG AACGGTTGATGTCGGGTCGCCGCAGATGTCCATGCACTCCATTCGGGAGA CCATGGGCGTCGACGACGCATTGCACGGTTACCGGCACATCAAGGTGCGT TTTGTTGTAGTATTATCTTCGCTTCAACCCCCCCACGACTATATTTACAT ATTGCAGTATACAGACATACGAAGTATGTATATAGAAGTATGATAGAGTT CTGATCAGACATTTTCTACTTGCCTCTTTGCACATCTGACCGCAAGTCGG GTCGGATTAAGCCGATCGCCTACACGTATGCTAATCAACCACTCGTCAAT CACTACTCCGGGAAGCCCGCGGTTGCTGCGGTCTCGGGTGTGCGTTTCAC TTCTCCCACCCCGTCCTCCTTCCAATCTTCGACTCTTTTATTGCGCATCG GTATATTGCCGTGTATATATACTATGCGTAGAACCAGCTTCTGATTAGTT ATTACGGAGAAACACACTAATCAGGACCAAATATGACGACCGTGAATACT CTACTATTCCGACCGTGAATACGAATACCCAAACAACAACAGAGATCTCG TGAAGAAAGAAAAGCACGAGATTTGGCCTTATACAAGAACAACTACCGTG AAATCTCGGTAATTCCAGCCTATTTTTGTTTTTCTAGGTTCAGAATTGCG TCAAATTTGGACCTCCGTAATAATTTCTCCTTGAAAAAAAAAAAAAGAAG GAAAAGCACGAGATTTGGCCTTATACAAGAACAACTACCGTAAAATCTCG GTAGTTCCAGCCTATTTTTGTTTTTCTAGGTTCAGAATTGCGTCAAATTT GGACCTGTTAACTATGGTCCTCCGTGATAATTTCTCCTTGAGTCTTTGCT ATAGCATCTGACCACGAGTCGGGTCGGATGAAAGGTGTCATCAAAAGAGG GAAAACGTACACGGTTCTTCCCGCTTTTTCAACCGTCGACGGTTGAAAAA ACGGTGAAATATTTTTGCATGCCCACGCGCTCCTCCTGCGAGGAAAAAGC ACATTAAAATCCAGTCGTACATACAACTGATGCCAAACAAAACGAGGTTT GTGGTTCCACATGCGGCATCACAAAAATTCAAAACCCTGTCCGTGTACCC CCCTAAACTGCGCCTTAGCGATCTATTGCTCCATCAGTTCGCTATCCACC TTCCCTGTTCAGATCGTGAACGTATTTGAGCAGCGCGTATGATAGCCCTC GACTTGCTCATCGAAAAGAGCACCGTTAAGGGCTCCGGGTGGGCCATCTA CCCTCTATAATCGGATAATCGGTGTTATCGACGAGGGCCTTAGGCGCGCC TCCCCCCTCCCCTGCCTGGCGTTTTTGGGTCCTCTACAGCAGAGCGCGTC TTCAAGTCTACTCAAGGAAACAGCCCCCCCCCCCGCCTCCCCTGCGTGTG TTCCCCCGCAATCGCGATGCGTTTCAGGCGGTACTGAAAAACTTCTTCGA GCTCGACGGGCAGCTTAAGGTAGACGCGGTTCCCGGCGTCCCCTGACTCG CCGTGTGCTAGCTAGATGGGAACGTTGAGGCTGCCGTTTGCTGGTCCAGT GGCCGGGAGCTCACCAAACGACCGGGATGGAGCCGCGCGGTTCCTTGAGG CACGAGGGGAAAGTTTAGTCGCGCCGCCGCGATTGCCGCGTCGTTTTTTA TTTTTTTTGCGGCATAAGCGGGTGAAAGAGATGGGATTATCTCTATATCC CTTTGTGATCTCAGACAGACGGGATTCGGATATATATCATATAGGCACAG CACAAATGTGTGCAACGAACAAAAAAACACAACTGGTGCGCCCGGGGGCG AGCACGCCAACGTAATAGGGTATACAGTATGTGGTCTTGGCGTAGAGCCA GGAATGTAATCCGGCGTGGAAAATGCGATGTGTTGTAGTGCAACCCACTT GTGTGGCTGCGTCTTGTTACCCCTTTGCCGCTGCATTCGTTTTGCGCGGA AATGTCGTCACTAGTACATTGTAGCTTTTGCGGGTATGGAGTGAATGCTA TTGAGCAGGCCAAAGATTGAGGGGGG
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Coding sequence (CDS) from alignment at S-dermatodea_contig10357:123..3598-

>mRNA_S-dermatodea_contig10357.262.1 ID=mRNA_S-dermatodea_contig10357.262.1|Name=mRNA_S-dermatodea_contig10357.262.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=996bp|location=Sequence derived from alignment at S-dermatodea_contig10357:123..3598- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGAGGAGATGAGGAGGATCGCGGTCGCTCTGGCGGCGTCCCCCGCGGAC
GTTGTGATGGAGAGCGTCGTGAGAAAGAGGATCGCGGTCGCTCTGGCGGC
GTCCCCCGCGGACGTTGTGATGGAGAGCGTCGTGAGAAAGAGCTTCCTAG
TCTCTGCCGATATGGCGCACGCGTTGCACCCCAACTACATTGATCGCCAC
GACCCAGCGCTTGGGCCCAAGATCCACTCCGGCATGGTTCTAAAGCACAA
CGCTAACCAGCGGTACGCGACAAATGCCGTTACCGGCTTCCTCTTCAGGG
AGCTGGGTTCCCGCGCGGGTTTGCCGACGCAGGAGTTCGCGCTTCCTAGT
CTCTGCCGATATGGCGCACGCGTTGCACCCCAACTACATTGATCGCCACG
ACCCAGCGCTTGGGCCCAAGATCCACTCCGGCATGGTTCTAAAGCACAAC
GCTAACCAGCGGTACGCGACAAATGCCGTTACCGGCTTCCTCTTCAGGGA
GCTGGGTTCCCGCGCGGGTTTGCCGACGCAGGAGTTCGCGGTGAAAAACG
ACTCTGGCTGCGGGAGCACCATCGGCCCCACCCTCTCCGCCCTGTCGGGC
ATCCGAACGGTTGATGTCGGGTCGCCGCAGATGTCCATGCACTCCATTCG
GGAGACCATGGGCGTCGACGACGCATTGCACGGTTACCGGCACATCAAGG
TGAAAAACGACTCTGGCTGCGGGAGCACCATCGGCCCCACCCTCTCCGCC
CTGTCGGGCATCCGAACGGTTGATGTCGGGTCGCCGCAGATGTCCATGCA
CTCCATTCGGGAGACCATGGGCGTCGACGACGCATTGCACGGTTACCGGC
ACATCAAGGCGGTACTGAAAAACTTCTTCGAGCTCGACGGGCAGCTTAAG
GTAGACGCGGTTCCCGGCGTCCCCTGAGCGGTACTGAAAAACTTCTTCGA
GCTCGACGGGCAGCTTAAGGTAGACGCGGTTCCCGGCGTCCCCTGA
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