mRNA_S-dermatodea_contig10353.260.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig10353.260.1
Unique NamemRNA_S-dermatodea_contig10353.260.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig10353.260.1 vs. uniprot
Match: D7G6W5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W5_ECTSI)

HSP 1 Score: 404 bits (1037), Expect = 3.870e-133
Identity = 204/322 (63.35%), Postives = 234/322 (72.67%), Query Frame = 1
Query:   19 RRVVAKQHHAFSAYADASSEGCQGTFVRRGYVPFATPNAVLNQATVERVQSRLPLLFRGDFDTGVYPDEMHWREGISKDDAPREIVNAWKADRTIAAVVLAEHLGRLAATIAGWQSARVAQDDIVWKPPGSGPVAYHQDSAYISTQFVPLNTKYENNSVTVWMPLDDCDRKVGTIEYATFTDRLKPGELPTIPSGPSSTPSFHGATGLNYRAPAEAAGRKLGRGVEFDPVAVPAGGCVVHGQDCWHGSAPNVSTHRHRRALVVHFLRGDVNFIEGHSLEGTGGPSYIYSRYKRIGSTEVSEEAFPITFSQGGYRTPWIEAYL 984
            R VV +Q   FS   D ++     +   RGY  +     VL+  TV R++ RLPLLFRG+FDTGVYPDEMHWREGIS+DDAPREIVNAWKADRT+A+VVL+EHL RLAA++AGW SAR+AQDD+VWKPPGSGPV YHQDSAYIS QF P      NNSVT+W+ LDDCDR+    + +T                 SS PSFHGA   NYRAPAEAA   LGR VEF+ VAV  G CVVH QDCWHGSAPNVS  RHRRALVVHFLRGD  FI+GHSL+ TGGPSYIYSRYK + S  + EEAFPITFS+ GYRT WI+ +L
Sbjct:    6 RPVVLQQRRTFSVVVDGAASQ---SLAERGYT-YVKGLRVLDDVTVARLRVRLPLLFRGEFDTGVYPDEMHWREGISRDDAPREIVNAWKADRTVASVVLSEHLARLAASLAGWDSARIAQDDVVWKPPGSGPVGYHQDSAYISRQFTPR----ANNSVTMWIALDDCDREGSAADSSTSR---------------SSLPSFHGADASNYRAPAEAAALSLGRRVEFEAVAVKPGECVVHAQDCWHGSAPNVSAQRHRRALVVHFLRGDARFIDGHSLQRTGGPSYIYSRYKSLDSNRLPEEAFPITFSKDGYRTGWIDTFL 304          
BLAST of mRNA_S-dermatodea_contig10353.260.1 vs. uniprot
Match: A0A7S4GPA4_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GPA4_9EUGL)

HSP 1 Score: 257 bits (656), Expect = 7.940e-75
Identity = 136/284 (47.89%), Postives = 176/284 (61.97%), Query Frame = 1
Query:  160 RVQSRLPLLFRGDFDTGVYPDEMHWREGISKDDAPREIVNAWKADRTIAAVVLAEHLGRLAATIAGW-QSARVAQDDIVWKPPGSGPVAYHQDSAYISTQFVPLNTKYENNSVTVWMPLDDCDRKVGTIEYATFTDRLKPGELPTIPSGPSSTPSFHGATGLNYRAPAEAAGRKLG---RGVEFDPVAVPAGGCVVHGQDCWHGSAPNVSTHRHRRALVVHFLRGDVNFIEGHSLEGTGGPSYIYSRYKRIGSTEVSEEAFPITFSQGGYRTPWIEAYLGEKAS 999
            R++ R   LF G F+TGVYPDE HWREG+S   A REIVN WK DR +A++ L+E LG LA+ + GW Q AR+AQDD++WKPPG+  + YHQDSAYISTQF+P    YENNSVTVW+ LD+   + G +EYA  + + +     T     ++  SFH  T  ++RA   AA + +G     V+F+  +VP GGC++H  D WHGS PN S   HRRAL VH LR DV F       G   P YIY RY   GST+V E  FP+ ++  GYR+P +     E  S
Sbjct:  158 RIRDRFGGLFAGKFETGVYPDEWHWREGLSFPSAAREIVNGWKCDRLVASMALSEALGGLASQLMGWEQGARIAQDDVLWKPPGARGIGYHQDSAYISTQFLP----YENNSVTVWIALDEATPENGAVEYALGSHKWRAQATET-----ATDSSFH--TDSDHRAAVHAAAKAVGIDSNNVQFEMPSVPLGGCLLHHGDTWHGSGPNRSPETHRRALAVHLLRRDVQF------RGEPAPDYIYGRYALHGSTQVDETFFPVVYAPDGYRSPQLSTACSEDVS 424          
BLAST of mRNA_S-dermatodea_contig10353.260.1 vs. uniprot
Match: A0A7S0FL38_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FL38_9STRA)

HSP 1 Score: 249 bits (636), Expect = 4.850e-73
Identity = 142/318 (44.65%), Postives = 180/318 (56.60%), Query Frame = 1
Query:  103 RGYVPFATPNAVLNQATVERVQSRLPLLFRGDFDTGVYPDEMHWREGISKDDAPREIVNAWKADRTIAAVVLAEHLGRLAATIAGWQSARVAQDDIVWKPPGS--------------------GPVAYHQDSAYISTQFVPLNTKYENNSVTVWMPLDDCDRKVGTIEYATFTDRLKP---------GELPTIPSGPSSTPSFHGATGLNYRAPAEAAGRKLGRG---VEFDPVAVPAGGCVVHGQDCWHGSAPNVSTHRHRRALVVHFLRGDVNFIEGHSLEGT------GGPSYIYSRYKRIGSTEVSEEAFPITF 942
            RG+ P  T + +L + T  +V+ RLP LFRG+FDTG YPDE HWREGISK+ A REI NAWK+DRTIA+VVL E LGRL A +  W S R+AQDD+VWKPP                        V +HQDSAYISTQF P    Y++NSVT+WM L+D D++ G +EYA  + + +P          E        S   SFH A   +YR     A      G      + V V  G  + H QD +HGS PN+STHRHRRALV H++RGDV+F+   S   +      G  SYIY RY+R  S +V    FP+ +
Sbjct:   29 RGFAP--TNHQLLTKQTCAKVRDRLPRLFRGEFDTGNYPDEWHWREGISKEHAAREICNAWKSDRTIASVVLNEELGRLVAEVMDWDSVRIAQDDLVWKPPSPQDDSNTRGAVGRELGAQRRIDTVGFHQDSAYISTQFEP----YDSNSVTLWMALEDVDKESGCVEYAVGSHKWRPLLHYAEGSENEKERNSGSGSEISSFHSADETSYRNSMLVAANLAECGDPQETIEAVPVKEGRAIFHHQDVFHGSGPNMSTHRHRRALVGHYIRGDVSFVTSGSTSRSKQNGPFGTSSYIYGRYRRYNSVDVDTSFFPVIY 340          
BLAST of mRNA_S-dermatodea_contig10353.260.1 vs. uniprot
Match: A0A7S2S8Y4_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S8Y4_9STRA)

HSP 1 Score: 243 bits (620), Expect = 3.480e-71
Identity = 142/318 (44.65%), Postives = 193/318 (60.69%), Query Frame = 1
Query:    1 MITRLARRVVAKQHHAFSAYADASSEGCQGTFVRRGYVPFATPNAVLNQATVERVQSRLPLLFRGDFDTGVYPDEMHWREGISKDDAPREIVNAWKADRTIAAVVLAEHLGRLAATIAGWQS-ARVAQDDIVWKPPGSGPVAYHQDSAYISTQFVPLNTKYENNSVTVWMPLDDCDRKVGTIEYATFTDRLKPGELPTIPSGPSSTPS--FHGATGLNYRAPAEAAGRKLGRGVEFDPVAVPAGGCVVHGQDCWHGSAPNVSTHRHRRALVVHFLRGDVNFIEGHSLEGTGGPSYIYSRYKRIGSTEVSEEAFPITFS 945
            ++T+L+RR V    H+F      +    Q +F R G++    PN ++++ TVE +++R   LF G F+TG+YPDE HWREGIS+ DA REIVN WKAD  + +VV ++ +G++A+ + GW++ +RV QDDI+WKPP +G VA+HQD+AYISTQF P     +NNSVTVW+ LDD D + G +EY        PG      SGPSS  S  FH  +    +   +AA R   +  E   VAVPAGG + H QD WHGSA NVS  RHRRAL +H ++ DV +           P YIY RY   GS    +  FP+T+S
Sbjct:   12 LLTKLSRRHV----HSFGGVLSVTE---QESFRRNGFL--LVPN-LIDETTVESLKARYVDLFAGKFETGIYPDEWHWREGISRPDAFREIVNGWKADNVVRSVVTSQDIGKIASNLMGWKAGSRVGQDDILWKPPLAGEVAFHQDAAYISTQFEPA----QNNSVTVWIALDDADEETGVVEYC-------PGSHLWDESGPSSAVSSAFHSPSEGYDKPLYDAANRAGQQNPEIVRVAVPAGGAIFHHQDVWHGSAKNVSKVRHRRALGIHLVQKDVEW------RSNPPPDYIYGRYVLPGSHTPEDSFFPVTYS 302          
BLAST of mRNA_S-dermatodea_contig10353.260.1 vs. uniprot
Match: L1I9R4_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I9R4_GUITC)

HSP 1 Score: 237 bits (604), Expect = 3.770e-69
Identity = 132/296 (44.59%), Postives = 169/296 (57.09%), Query Frame = 1
Query:   73 SEGCQGTFVRRGYVPFATPNAVLNQATVERVQSRLPLLFRGDFDTGVYPDEMHWREGISKDDAPREIVNAWKADRTIAAVVLAEHLGRLAATIAGWQSARVAQDDIVWKPPGSGPVAYHQDSAYISTQFVPLNTKYENNSVTVWMPLDDCDRKVGTIEYATFTDRLKPGELPTIPSGPSSTPSFHGATGLNY--RAPAEAAGRKLGRGVEFDPVAVPAGGCVVHGQDCWHGSAPNVSTHRHRRALVVHFLRGDVNFIEGHSLEGTGGPSYIYSRYKRIGSTEVSEEAFPITFSQGG 954
            S+  + +F R G+V       VL++  VE  +SR+  LF GDFDTG+YPDE HWR+GIS   A REI N WK+D+TIA++VL E  GR A  + GW SAR+AQD I+WKP G+G V++HQDS YIS QF+P     ENNS+T W  LDD D + G IEYA+ +   +              P FH A       R  A +AG+++ + V    + VPAG  V H Q+ WHGS  N S  R RRAL VH LRGDV F+E         P YIY RYK      + +  FP  +   G
Sbjct:    6 SKEARTSFRREGFVQLGE---VLSKEEVEACRSRMDRLFAGDFDTGIYPDEWHWRKGISLPGAVREICNGWKSDKTIASIVLGERFGRAACELMGWPSARIAQDSIIWKPAGAGSVSWHQDSPYISKQFIPE----ENNSITFWCALDDADEETGVIEYASGSHEWEADR--------ELAPEFHAARDYQQGLRRAAASAGKEMSQ-VNIARLLVPAGSAVAHHQNTWHGSGENKSKMRDRRALAVHVLRGDVKFVEK--------PGYIYGRYKLGEDDSLHDSFFPYLYRSQG 277          
BLAST of mRNA_S-dermatodea_contig10353.260.1 vs. uniprot
Match: L8H5R3_ACACA (PhytanoylCoA dioxygenase (PhyH) superfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H5R3_ACACA)

HSP 1 Score: 237 bits (605), Expect = 9.850e-69
Identity = 129/291 (44.33%), Postives = 169/291 (58.08%), Query Frame = 1
Query:  118 FATPNAVLNQATVERVQSRLPLLFRGDFDTGVYPDEMHWREGISKDDAPREIVNAWKADRTIAAVVLAEHLGRLAATIAGWQSARVAQDDIVWKPPGSGPVAYHQDSAYISTQFVPLNTKYENNSVTVWMPLDDCDRKVGTIEYATFTDRLKPGELPTIPSGPSSTPSFHGA--TGLNYRAPAEAAGRKLGRG-VEFDPVAVPAGGCVVHGQDCWHGSAPNVSTHRHRRALVVHFLRGDVNFIEGHSLEGTGGPSYIYSRYKRIGSTEVSEEAFPITFSQGGYRTPWIEAY 981
            F   + +++ +  E +++R PLLFRG+FDTGVYPDE HWREG+ +DD  REIVN+WK+D TIA+ VL+E LGRLAA +AGW   RV QDDI WKPPG+  V++HQD+ Y    F  LN + E   +T W+ LDD  R  GT+EY   + +            P  +     A  T  +YRA  +   + LG    E  PV VPAGG   H    WHGS PN    R RR+L +HFL         H+     G  YIY RYK+ GS E+ E  FPIT+   GYR+P++ +Y
Sbjct:   53 FLVVDRLIDPSLAEAIKNRFPLLFRGEFDTGVYPDEWHWREGMGRDDVTREIVNSWKSDYTIASAVLSERLGRLAAELAGWMGTRVGQDDIWWKPPGTKAVSFHQDAPY----FDFLNPRRE--LITCWIALDDTSRTAGTLEYVRGSHKW-----------PQESKMLQNAFFTAQDYRASLDHTAKHLGLPRPEVVPVEVPAGGAAFHSGPTWHGSGPNTDKTRVRRSLAIHFL-------PSHATFQPTGVGYIYGRYKKWGSVEMEETFFPITYRHDGYRSPFLASY 319          
BLAST of mRNA_S-dermatodea_contig10353.260.1 vs. uniprot
Match: A0A7S0E1W7_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E1W7_9CRYP)

HSP 1 Score: 237 bits (604), Expect = 1.600e-68
Identity = 130/298 (43.62%), Postives = 173/298 (58.05%), Query Frame = 1
Query:   73 SEGCQGTFVRRGYVPFATPNAVLNQATVERVQSRLPLLFRGDFDTGVYPDEMHWREGISKDDAPREIVNAWKADRTIAAVVLAEHLGRLAATIAGWQSARVAQDDIVWKPPGSGPVAYHQDSAYISTQFVPLNTKYENNSVTVWMPLDDCDRKVGTIEYATFTDRLKPGELPTIPSGPSSTPSFHGATGLNYRAP----AEAAGRKLGRGVEFDPVAVPAGGCVVHGQDCWHGSAPNVSTHRHRRALVVHFLRGDVNFIEGHSLEGTGGPSYIYSRYKRIGSTEVSEEAFPITFSQGG 954
            S+  + +F  +G++       VLN+  VE  ++R+  LF G+FDTG+YPDE HWR+GIS   A REI N WK+DR IA++VL E  GR A  + GW SAR+AQD ++WKP G+G V++HQDS YIS QF P+    ++NS+T W  LDD D + G IEYA  +   +P             P FHG    +Y+ P    A +AG+ L + VE   + VPAG  VVH Q+ WHGS  N S  R RRAL +H LRGDV F+E         P YIY RYK   +  + +  FP  +   G
Sbjct:   56 SDEAKRSFWSKGFLQLGQ---VLNEEQVEACRARMERLFAGEFDTGIYPDEWHWRKGISYPGAVREICNGWKSDRVIASIVLGETFGRAACKLMGWPSARIAQDSVIWKPAGAGSVSWHQDSPYISRQFTPV----DDNSLTFWCALDDADEETGVIEYAAGSHEWQPRR--------ELEPQFHGLQ--DYQQPLRQAAASAGKDLSQ-VEITRLVVPAGSAVVHHQNTWHGSGENKSKQRDRRALAIHVLRGDVKFVER--------PGYIYGRYKMGDNDSLHDAFFPYLYRSDG 327          
BLAST of mRNA_S-dermatodea_contig10353.260.1 vs. uniprot
Match: A0A6U3ZUB2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ZUB2_9STRA)

HSP 1 Score: 240 bits (613), Expect = 2.640e-68
Identity = 149/368 (40.49%), Postives = 193/368 (52.45%), Query Frame = 1
Query:  100 RRGYVPFATPNAVLNQATVERVQSRLPLLFRGDFDTGVYPDEMHWREGISKDDAPREIVNAWKADRTIAAVVLAEHLGRLAATIAGWQSARVAQDDIVWKPPGSGP----------------VAYHQDSAYISTQFVPLNTKYENNSVTVWMPLDDCDRKVGTIEYATFTDRLKP-------------------------GELPTIPSGPSSTPSFHGATGLNYRAPAEAAGRKLG------------RGVEFDPVAVPAGGCVVHGQDCWHGSAPNVSTHRHRRALVVHFLRGDVNFIEGHSLEGT-------------GGPSYIYSRYKRIGSTEVSEEAFPITFSQGGY-----RTPWIEAYLGE 990
            +RGY    +   +L++     +++R+PL+FRG FDTGVYPDE HWREGIS   A REI NAWK+DRT+A+VVL E +G+L A I GW+S RVAQDD+VWK P  G                 V +HQDSAYIS QF P    YENNS+TVW+ LDD D + G +EYA  + + +P                          E  T   G S   SFH +T   YR     A    G              V  +   V  G  + H QD WHGS PN S  RHRRALVVH+L+GDV F E  + +G              G  +YIY RYK+ GS EV E+ FPI +++        RT W+++++G+
Sbjct:   92 QRGYAK--SKGRILSKDRCLAIRNRMPLIFRGIFDTGVYPDEWHWREGISFPHATREICNAWKSDRTVASVVLDESMGKLVADITGWESVRVAQDDLVWKVPYDGARRQEEVKVEEKNVNTVVGFHQDSAYISKQFSP----YENNSLTVWISLDDADEESGCVEYAVGSHKWRPLLHFSGSNSSFLDGDDNSSESNYIPNEHQTDDEG-SLLSSFHSSTSNTYRDGLLPAAVSAGVYDSTAITDAATSPVTIEAAPVKEGYALFHHQDTWHGSGPNRSEMRHRRALVVHYLQGDVIFREKCNDKGEASSLSSPSPSSPWGPTTYIYGRYKKFGSQEVDEDFFPIVYARDEAECRKKRTAWLDSFIGQ 452          
BLAST of mRNA_S-dermatodea_contig10353.260.1 vs. uniprot
Match: A0A7S1XNM5_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNM5_9STRA)

HSP 1 Score: 234 bits (596), Expect = 9.950e-68
Identity = 140/298 (46.98%), Postives = 172/298 (57.72%), Query Frame = 1
Query:   85 QGTFVRRGYVPFATPNAVL-NQATVERVQSRLPLLFRGDFDTGVYPDEMHWREGISKDDAPREIVNAWKADRTIAAVVLAEHLGRLAATIAGWQS-ARVAQDDIVWKPPGSGPVAYHQDSAYISTQFVPLNTKYENNSVTVWMPLDDCDRKVGTIEYATFTDRLKPGELPTIPSGPSSTPSFHGATGLNYRAPAEAAGRKLGRGV-EFDPVAVPAGGCVVHGQDCWHGSAPNVSTHRHRRALVVHFLRGDVNFIEGHSLEGTGGPSYIYSRYKR-IGSTEVSEEAFPITFSQGGYRTP 966
            +  F R G+V  A P  V   +A V R       LFRGDF  GVYPDE HWREGISK DA REIVN WKA   +A V L+E +GRLAA + GW + AR+ QDD++WKP G+G VA+H D+AYIS+ F P    YE+NSVTVW+ LDD D + G + YA  +    P       +  +   +FHG      R PA  A    G    +F+ + VPAGG V H QD WHGS PNVS  R RRAL +H++R D  F E         P YIY RY    G T V E  FPI ++  GYR+P
Sbjct:    7 RSAFRRDGFV--ARPGVVAAGEAKVLR--EHYAALFRGDFPRGVYPDEWHWREGISKPDAFREIVNGWKASHLVAPVALSERIGRLAAELMGWSAGARLGQDDLLWKPAGAGGVAFHTDAAYISSNFRP----YEDNSVTVWIALDDADAETGVVAYAPGSHAW-PSAADKEKASVTDA-AFHGEGDAGLREPARRAAAAAGVAPPQFEELTVPAGGAVFHHQDVWHGSGPNVSPERPRRALGLHYVRADAGFREAPP------PDYIYGRYVLGEGDTTVHETFFPIVYTPKGYRSP 288          
BLAST of mRNA_S-dermatodea_contig10353.260.1 vs. uniprot
Match: A0A2R5GIF2_9STRA (Phytanoyl-CoA dioxygenase domain-containing protein 1-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GIF2_9STRA)

HSP 1 Score: 231 bits (590), Expect = 1.070e-66
Identity = 141/323 (43.65%), Postives = 179/323 (55.42%), Query Frame = 1
Query:    4 ITRLARRVVAKQHHAF-----SAYADASSEGCQGTFVRRGYVPFATPNAVLNQATVERVQSRLPLLFRGDFDTGVYPDEMHWREGISKDDAPREIVNAWKADRTIAAVVLAEHLGRLAATIAGW-QSARVAQDDIVWKPPGSGPVAYHQDSAYISTQFVPLNTKYENNSVTVWMPLDDCDRKVGTIEYATFTDRLKPGELPTIPSGPSSTPSFHGATGLNYRAPAEAAGRKLG---RGVEFDPVAVPAGGCVVHGQDCWHGSAPNVSTHRHRRALVVHFLRGDVNFIEGHSLEGTGGPSYIYSRYKRIGSTEVSEEAFPITFS 945
            + R A+R  A+   A      S  A   S        R G+V       VL+   V+R + R   LF+G+FDTG+YPDE HWREGISK DA REIVN WKAD  IA VV +  LG+LA  + GW   AR+AQDD++WKPP +G VA+HQDSAYIS QF P    YENNSVT+W+ LDD D+  G +EY   +  L P       +   S  +FHG    ++  P   A R  G     +E   + V  G  +VH QD WHGSA +VS+ RHRRAL VH +R DV + +      T  P YIY RY         +E FP T++
Sbjct:    8 VARTAKRETARTLSALPRRLSSTTAPVVSADASAKLARDGFVAVGK---VLSDDEVQRARGRFEDLFKGNFDTGIYPDEWHWREGISKPDAFREIVNGWKADSQIAGVVRSPTLGKLATELMGWPHGARLAQDDVLWKPPLAGGVAFHQDSAYISAQFKP----YENNSVTIWIALDDADQDTGVVEYCVGS-HLWPNNKAKETTASGS--AFHGQA--HHLGPLAQAARSAGVSDADIEIQRITVRTGEAIVHHQDVWHGSAASVSSTRHRRALGVHLVRSDVTWRD------TRRPDYIYGRYYLPQEASPRDEFFPQTYT 312          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10353.260.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6W5_ECTSI3.870e-13363.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S4GPA4_9EUGL7.940e-7547.89Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S0FL38_9STRA4.850e-7344.65Hypothetical protein (Fragment) n=1 Tax=Minutocell... [more]
A0A7S2S8Y4_9STRA3.480e-7144.65Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
L1I9R4_GUITC3.770e-6944.59Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
L8H5R3_ACACA9.850e-6944.33PhytanoylCoA dioxygenase (PhyH) superfamily protei... [more]
A0A7S0E1W7_9CRYP1.600e-6843.62Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A6U3ZUB2_9STRA2.640e-6840.49Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S1XNM5_9STRA9.950e-6846.98Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A2R5GIF2_9STRA1.070e-6643.65Phytanoyl-CoA dioxygenase domain-containing protei... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10353contigS-dermatodea_contig10353:3641..7487 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score405.2
Seed ortholog evalue3e-110
Seed eggNOG ortholog2880.D7G6W5
EggNOG free text desc.Phytanoyl-CoA dioxygenase (PhyH)
EggNOG OGs2BUAT@1,2S22Y@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionPhytanoyl-CoA dioxygenase
Ec32 orthologEc-01_011990.1
Exons5
Model size2114
Cds size1032
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10353.260.1prot_S-dermatodea_contig10353.260.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig10353 4723..7487 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924153.1468117-UTR-S-dermatodea_contig10353:3640..47221622924153.1468117-UTR-S-dermatodea_contig10353:3640..4722Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10353 3641..4722 -
1694079053.979793-UTR-S-dermatodea_contig10353:3640..47221694079053.979793-UTR-S-dermatodea_contig10353:3640..4722Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10353 3641..4722 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924153.1569808-CDS-S-dermatodea_contig10353:4722..48991622924153.1569808-CDS-S-dermatodea_contig10353:4722..4899Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10353 4723..4899 -
1694079054.0033522-CDS-S-dermatodea_contig10353:4722..48991694079054.0033522-CDS-S-dermatodea_contig10353:4722..4899Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10353 4723..4899 -
1622924153.1667202-CDS-S-dermatodea_contig10353:5158..54781622924153.1667202-CDS-S-dermatodea_contig10353:5158..5478Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10353 5159..5478 -
1694079054.0155056-CDS-S-dermatodea_contig10353:5158..54781694079054.0155056-CDS-S-dermatodea_contig10353:5158..5478Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10353 5159..5478 -
1622924153.1902492-CDS-S-dermatodea_contig10353:6092..61461622924153.1902492-CDS-S-dermatodea_contig10353:6092..6146Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10353 6093..6146 -
1694079054.026656-CDS-S-dermatodea_contig10353:6092..61461694079054.026656-CDS-S-dermatodea_contig10353:6092..6146Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10353 6093..6146 -
1622924153.1999938-CDS-S-dermatodea_contig10353:6329..65401622924153.1999938-CDS-S-dermatodea_contig10353:6329..6540Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10353 6330..6540 -
1694079054.0368748-CDS-S-dermatodea_contig10353:6329..65401694079054.0368748-CDS-S-dermatodea_contig10353:6329..6540Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10353 6330..6540 -
1622924153.2108402-CDS-S-dermatodea_contig10353:7217..74871622924153.2108402-CDS-S-dermatodea_contig10353:7217..7487Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10353 7218..7487 -
1694079054.0467286-CDS-S-dermatodea_contig10353:7217..74871694079054.0467286-CDS-S-dermatodea_contig10353:7217..7487Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10353 7218..7487 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig10353.260.1

>prot_S-dermatodea_contig10353.260.1 ID=prot_S-dermatodea_contig10353.260.1|Name=mRNA_S-dermatodea_contig10353.260.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=344bp
MITRLARRVVAKQHHAFSAYADASSEGCQGTFVRRGYVPFATPNAVLNQA
TVERVQSRLPLLFRGDFDTGVYPDEMHWREGISKDDAPREIVNAWKADRT
IAAVVLAEHLGRLAATIAGWQSARVAQDDIVWKPPGSGPVAYHQDSAYIS
TQFVPLNTKYENNSVTVWMPLDDCDRKVGTIEYATFTDRLKPGELPTIPS
GPSSTPSFHGATGLNYRAPAEAAGRKLGRGVEFDPVAVPAGGCVVHGQDC
WHGSAPNVSTHRHRRALVVHFLRGDVNFIEGHSLEGTGGPSYIYSRYKRI
GSTEVSEEAFPITFSQGGYRTPWIEAYLGEKASQAMTDAPVTR*
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mRNA from alignment at S-dermatodea_contig10353:3641..7487-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig10353.260.1 ID=mRNA_S-dermatodea_contig10353.260.1|Name=mRNA_S-dermatodea_contig10353.260.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3847bp|location=Sequence derived from alignment at S-dermatodea_contig10353:3641..7487- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGATAACACGCCTCGCCCGCCGGGTTGTGGCCAAGCAGCACCATGCTTT CTCTGCATATGCTGACGCCTCTTCGGAAGGCTGCCAGGGGACGTTTGTTC GGCGAGGGTACGTGCCTTTCGCCACACCGAATGCCGTGCTCAACCAAGCC ACGGTCGAACGGGTCCAATCTCGCTTGCCTTTGCTCTTCCGTGGCGACTT TGATACAGGCGTCTACCCTGATGAAATGCACTGGAGAGAAGGGATATCAA AGGATGACGCGCCTCGCGAGGTGACCACGTTCGAGTGCTTGCTGACGTCG ATAGTGGATAATAGTTTCCCCTGAACCAATGTGCCAGTGAGTTTAGGGAT GTACATGGGAACTATCGTATTTTGTTTTTTATAAATAGCGCCAGTGCAGT TATAAGCTCTACATAGGAGGCAGATGCCCCCGAGAAGCTCCTCTTCGCCG AGGTTATATCGTACTCGCTTATCGGGAGCCCTCTCTGGCTTTTCCGTCGC AATACGCCCAAGAGAATGGAGCGTATCCTTCAGTGTTGCGCTTCAGTTGA ACTGCAGAAAAGCTCAAGGCTCTAAAATTTCGCCTGGACCATGTTCTACT GAAGATTTTTCTTTCGGGCGGACGTGAAATTATCTCAGTTTTGTGAGAAC AAAATCCATCTGGGTCCTGTCCCGATGAGTTATTGTATGGATTGTACACT TTCTGTGTTCTGTTTCTTTATAAAAACATGTACTTGAAGTATATAGGGTG CTCTTGCTAGGCGTTCGCAGACTTTGGTGAGAAGGGCGCTGGCTTCCAGA CCCAGTTTGCGATGCCTGCTTCCAGACCCAGTTTGCGATGCCTGCAGTGC TGAGGTGGCCCCGCACACCCCAGGAAGGCCCTTTCAACATGATTAGCAGA TACTGTAGACGCTGAGTGATGGAACCCATAACTCCGCCCCGACACAGATC GTGAACGCGTGGAAGGCAGACCGCACCATCGCCGCGGTAGTCCTTGCTGA ACACCTTGGGAGACTTGCTGCGACTATCGCGGGGTGGCAATCAGCCCGCG TCGCGCAGGACGACATCGTCTGGAAACCCCCCGGATCAGGACCTGTCGCA TACCACCAAGACTCCGCCTACATCAGCACCCAGTTTGTCCCGCTAAATAC TAAATACGGTGGGAAGTCGTGTAGCAGGCTACCCGCAGGTGCTTGATACG TTTGGGCCGAGACGCAGTTGAGCCAGCAGCACCAATGGAAACCTAGACTC TTGGCCGAATACGTAGACGATCGTCGCACCGCGCGAGGAAACCACAACCT CCAACTCGGCCCTCGTTTTCCTGTCCTCTTTGCACAGGCAGAAAATAACT CCGTCACGGTGTGGATGCCGTTGGATGACTGCGATCGGAAGGTAGGTGAG AAAGCGAGCGCCCTTTCCATCGCAGAGAAATTTCCTCGTGTTAATAAGGA CTGAGGATGGATGTTGAGAATATTGAGAATTCGTGAGCATCGATATTTAT TTTTGAGAATTTGCACCTTTTTTCATGGACTGCACCGGAATCGAACCAGC GTCCTAGGGTCAAGAAGGCGACGGCTTACTTTTTGGTCCACTCGGGCAAA AACCCACCAAATAATTATTATAGTTTTGGAGTTGTCTTCCTTTTGAATGC AAAAAACGTGAGAGATTTCCTTCAAGAGCTCGTTTTCGTCATACACACGC AAACATTCACATATGTCGGTGCGGGGCCACCAGTAGGTAGCTACTGGGGT GCCGTCAGCAACGAGCAGGGCCTGCCCATCGCCGTGTGCTTGACTTGCAG CCTTTCGCAGCACAGCTATCCACAAACAAAAATCTGAGATTCTTCCGAAT CTGCGATATCAGTGGCATACTAAATGAACGAAAACCAACTTAGACTATTT CATGAAGTACCACCGTGCCGTGTAGAGCCTTATCCGTGTCGACCTCGTGA CGAATCAAAGTTCGAGCATGGACCAAAAACAACCACACCTCCATGCTTAC CGACACAAGGAACGATCGAGTACGCCACATTCACGGATCGGCTTAAGCCG GGGGAGCTCCCAACCATACCCTCCGGCCCCTCGTCTACACCATCCTTCCA CGGAGCCACTGGGCTGAACTATCGAGCGCCTGCCGAGGCAGCTGGGCGAA AATTGGGGCGCGGGGTGGAGTTTGATCCCGTCGCTGTGCCGGCAGGTGGT TGTGTTGTACACGGCCAGGACTGCTGGCACGGGAGTGCCCCCAACGTTTC CACACACAGGCATCGCCGAGCGCTTGTGGTTCATTTCCTTCGAGGGGACG TGAACTTCATCGAGGGACACTCTCTTGAGGTGCGTGCGGGTTGCTCCTCG GCTGTGCGTCGGTTCAGGAAGTTTCGAGTGTGTATCATACGTCGGGGATG CCTTGTAGGATTGCTTGCTGGCAGTCTCTGAATCACATATGAATAGGAAG TATGGCGGTCGCACTGACTACGCGTTACGTTGATTAGTTTGGGGGTCGCT TATATTCATCTGTGGACTACTTTGTCGCTTTTATGCGTTCTCCTCTTTTC AAACTCCAAGATGCCGTCTCGCACTGTGCGCTTCGCAGGGTACGGGCGGT CCATCGTACATCTACAGCAGATACAAGCGAATTGGCAGCACGGAAGTGTC GGAGGAGGCATTTCCCATCACCTTCTCACAAGGCGGCTACCGAACGCCGT GGATAGAGGCTTACCTCGGCGAGAAAGCGAGCCAAGCTATGACAGACGCT CCTGTAACCCGCTAGGGTAGGCCGTTGCAAACGGCGACGAGACTGGGGCT CTCTTCCATCGTTCCAAGTCCACTTGGCATCATGAGCTAGATTTTGTCGC GATTTTAATATTAAAAGTCCCACAAAGTGGCGGCATTTCCTGAAGATACG GCGAGACACATCCTCCATTATTGAAGAAAGGGTGTACGTACGGTCCGCGC CGCCCGCCCTGTGCTTTGGTTTCATGGTGCATTTTACTGCTTGAACAAAC AGGAGAGGAAAACCTAATGTGCCCCGGCGGCAGGTTGGTTAACCGCAGTG CGATCGATATCCTGGTTAAGTAACGCACCCCCGACTGTGGGGCCGCTTCG GCACTTTGTTTTGTACCTCGCGTCGCCGCACGTCTCTATACCTTTTCAAT GTATTGAATTGTGGGCTGAACGACCCCCCATTAGCGGAGGAGTGGTTTTT TTTTGTATGTGCCGTAAGATTTACGTCGGGGGAAGTTGCCTCGTCTTGGG GGCAGGGAATGACCTACGAGGATCGTCACGGTCGTTTCCGATAGTTTAGA GCCTTACTGTCTATTCGCTCTCCTTGTTGCGTTAATCCAATTTGTGTTTA GAGTCCGGCAGGCAACCCGCCCGCCATGATCGTGTTGGCGGGGTTTGACC TATGAATTGCCACGCGTAGCGTAGCGTGGGTGGCCTGTGTGCGAGAGGGA AGTGCACCCAGCGTGTGGAGATAGCGATCGACTGTACGTTCGTGTTGGGG AGAATCTTGTGTGTTCGTCGTGTGTACTGCCAAGTAGCCACGTTTGGACG TTCAACGGCTGCTCTTTTCTATATTGCTTCTGTATTTTGGTTCATTGGTG GCAGAATTGGCTAATACGCAGTACCTGAAATGCTCGCCGTGGGCGCACCA AACGCCGTTTGCGTGCGACGTCTTCTGTTCTTATAGTTGGGACTCCCCGT GGCAAGCGAAATATTACTTCTTTGCTTAGATTCTGCGCTTCTGTACACGA CGCGCCTGGACCTTCAGCTTCCCAAGCACCTTGGTGTGCCGCCTCCCTTC TCAGTACGATGTGATATAATGTGATCCATCGAGCCGTAGAGTGGGAC
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Coding sequence (CDS) from alignment at S-dermatodea_contig10353:3641..7487-

>mRNA_S-dermatodea_contig10353.260.1 ID=mRNA_S-dermatodea_contig10353.260.1|Name=mRNA_S-dermatodea_contig10353.260.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2064bp|location=Sequence derived from alignment at S-dermatodea_contig10353:3641..7487- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGATAACACGCCTCGCCCGCCGGGTTGTGGCCAAGCAGCACCATGCTTT
CTCTGCATATGCTGACGCCTCTTCGGAAGGCTGCCAGGGGACGTTTGTTC
GGCGAGGGTACGTGCCTTTCGCCACACCGAATGCCGTGCTCAACCAAGCC
ACGGTCGAACGGGTCCAATCTCGCTTGCCTTTGCTCTTCCGTGGCGACTT
TGATACAGGCGTCTACCCTGATGAAATGCACTGGAGAGAAGGGATATCAA
AGGATGACGCGCCTCGCGAGATGATAACACGCCTCGCCCGCCGGGTTGTG
GCCAAGCAGCACCATGCTTTCTCTGCATATGCTGACGCCTCTTCGGAAGG
CTGCCAGGGGACGTTTGTTCGGCGAGGGTACGTGCCTTTCGCCACACCGA
ATGCCGTGCTCAACCAAGCCACGGTCGAACGGGTCCAATCTCGCTTGCCT
TTGCTCTTCCGTGGCGACTTTGATACAGGCGTCTACCCTGATGAAATGCA
CTGGAGAGAAGGGATATCAAAGGATGACGCGCCTCGCGAGATCGTGAACG
CGTGGAAGGCAGACCGCACCATCGCCGCGGTAGTCCTTGCTGAACACCTT
GGGAGACTTGCTGCGACTATCGCGGGGTGGCAATCAGCCCGCGTCGCGCA
GGACGACATCGTCTGGAAACCCCCCGGATCAGGACCTGTCGCATACCACC
AAGACTCCGCCTACATCAGCACCCAGTTTGTCCCGCTAAATACTAAATAC
GATCGTGAACGCGTGGAAGGCAGACCGCACCATCGCCGCGGTAGTCCTTG
CTGAACACCTTGGGAGACTTGCTGCGACTATCGCGGGGTGGCAATCAGCC
CGCGTCGCGCAGGACGACATCGTCTGGAAACCCCCCGGATCAGGACCTGT
CGCATACCACCAAGACTCCGCCTACATCAGCACCCAGTTTGTCCCGCTAA
ATACTAAATACGAAAATAACTCCGTCACGGTGTGGATGCCGTTGGATGAC
TGCGATCGGAAGGTAGAAAATAACTCCGTCACGGTGTGGATGCCGTTGGA
TGACTGCGATCGGAAGGTAGGAACGATCGAGTACGCCACATTCACGGATC
GGCTTAAGCCGGGGGAGCTCCCAACCATACCCTCCGGCCCCTCGTCTACA
CCATCCTTCCACGGAGCCACTGGGCTGAACTATCGAGCGCCTGCCGAGGC
AGCTGGGCGAAAATTGGGGCGCGGGGTGGAGTTTGATCCCGTCGCTGTGC
CGGCAGGTGGTTGTGTTGTACACGGCCAGGACTGCTGGCACGGGAGTGCC
CCCAACGTTTCCACACACAGGCATCGCCGAGCGCTTGTGGTTCATTTCCT
TCGAGGGGACGTGAACTTCATCGAGGGACACTCTCTTGAGGAACGATCGA
GTACGCCACATTCACGGATCGGCTTAAGCCGGGGGAGCTCCCAACCATAC
CCTCCGGCCCCTCGTCTACACCATCCTTCCACGGAGCCACTGGGCTGAAC
TATCGAGCGCCTGCCGAGGCAGCTGGGCGAAAATTGGGGCGCGGGGTGGA
GTTTGATCCCGTCGCTGTGCCGGCAGGTGGTTGTGTTGTACACGGCCAGG
ACTGCTGGCACGGGAGTGCCCCCAACGTTTCCACACACAGGCATCGCCGA
GCGCTTGTGGTTCATTTCCTTCGAGGGGACGTGAACTTCATCGAGGGACA
CTCTCTTGAGGGTACGGGCGGTCCATCGTACATCTACAGCAGATACAAGC
GAATTGGCAGCACGGAAGTGTCGGAGGAGGCATTTCCCATCACCTTCTCA
CAAGGCGGCTACCGAACGCCGTGGATAGAGGCTTACCTCGGCGAGAAAGC
GAGCCAAGCTATGACAGACGCTCCTGTAACCCGCTAGGGTACGGGCGGTC
CATCGTACATCTACAGCAGATACAAGCGAATTGGCAGCACGGAAGTGTCG
GAGGAGGCATTTCCCATCACCTTCTCACAAGGCGGCTACCGAACGCCGTG
GATAGAGGCTTACCTCGGCGAGAAAGCGAGCCAAGCTATGACAGACGCTC
CTGTAACCCGCTAG
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