mRNA_S-dermatodea_contig1035.256.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig1035.256.1 vs. uniprot
Match: D7FL89_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL89_ECTSI) HSP 1 Score: 535 bits (1378), Expect = 6.480e-168 Identity = 416/1099 (37.85%), Postives = 541/1099 (49.23%), Query Frame = 1
Query: 1 SVAASSFPQPLRELLVMLHNLPSIDLFENRWETPAEAVVKKGLSAVSGYFTDLLAEPFR-VRQSSIEVVLIGQKGAGKTSLRQSIRTRKPTHTSGSQESTVKTYLVVYLFHGVIVDVSSCLAMHQVAYTGLLQLFLSPRAVRVLVCNTKRFGQRASDLGDSEQLAQDCRIFQKLRVCAWLAGLSFRVPDSDVIVVATKTKYDLAEGMATYMAGRM-----------ESAFRSACRIGPDKG*SLFVWKKA*I*RAAQPQRWKGD--NTRRLWRTLGT-LCGRATGATTCATTPPELV--VPIKGQQQRRSSTGYYGTPSELERRP*DARCSGERQAST*FCLVGLPHIEGGGGQGRL-VESQILQG--GIRGRTRREVGARGGRCGCREHQPRVGGRVVDQ*VRG------HAGSARDLHLS*CHLPGHHSQTPPEPQG*RRSFD----GSICLGDTHITLEDDNHIASWKRLKEQGVLETELTRVLWPNGLSNDVLPTLDSLGLTHPLDGDAADGLVVLLTLEEQRPDLVGKELDDFRGDHTAVLSVRWNMFLGVPPGAIESCSRGDAALALSKRFGALACLCKVEVVG----KIFALLAEYSHEESRIVMEVYGKVCTTAPWAALTHGISAVRAMCADYPGLRWRVFVKCSSHRKEMKINTAVTR----------------PTGGSS*VHEVAVLVTLRQADWERRRWNLSEWSTYVRTGWRCSEKWKT-CSSKSSAETPPFAWRKADA--SGVTRGCSDLTRA*RH*E-----TS*KSFLVP*RHRFKRS*PLLRACWMYWDSVXXXXXXCTTKICTRCGGGLGCTHGRFAEVIAANEDVMQMAGFLATIPMTVRGASIDTPRRACILPPWKFANPSGDLSDDEQQPENWVRRLREWQDDGFKWGKGISKQPSACFWCVRRQTGSCHVDLPAKNTISGM----PANGFEWCVPRSERCWLLRCRGWVLRLRKPFPRGGTY**GSWR---GSWKGFVWTTVQQRW-------ACIPSS*RGALSS*LRTFVHGVGENAIRELADKTKSAFKNRRPRSSSSEFVNFA*GMTKVQRRDGDADAQWVLKGHESAWYDAVR 3081
++A SS P+ L LL L L + + N W+ P EAVV KG+ AV YFTDL AE V + I+V+L+GQ+GAGKTSLRQS+RT +PT TSG +ESTV+ + +GV + V C QVAYTGLLQ+FLSPRAV +LVC+T FGQR L DS+QL +D Q+LRVC WL LSFR+PDSDV++VATK DLA GMA A RM A +A R+ + G +L A+ P G TR T C + G C + P L+ V + + R ++ + DA SG + +V + GG +G V + Q G+ G TR ++ + + V D + G H GS H + L +P R + G + LGDT ITL++D HIASW RLK GVLE EL VLWP+GLSN VLPTLDSLGLT+PLD D A+GLVVLL L+E+RP+ VGKELDDFR DHTAVLSV+W +FLGVPPGAIE L + F L + + G K FALL EYSH+ + MEVYG + T APWAAL++GIS +AMC+++PGLRWR +KC H ++M+I+ TR TGG A + L D R R +L R + ++ C + A P A R +DA GV S + R R S S R +R L+ V +I G R ++I A++ VM FL + M +R +TPRRAC+LPPW FA G LS EQ PE WV+RL +W++D FK GKG+ K+ F + H +P G P F V + + C P G ++ GS + + + + A + G + LR F+HGV + A E+A TK A + RR SSSEFV F M +VQRRDGDA AQWVLK HESAWYD R
Sbjct: 185 NLAGSSLPKQLEALLATLSQL-GLHVHTNPWQEPPEAVVSKGIPAVREYFTDLFAEGIAPVGRKMIKVILVGQEGAGKTSLRQSLRTGRPTPTSGPEESTVQIDVEQMDVNGVTLRVYDCAG--QVAYTGLLQMFLSPRAVSLLVCDTGAFGQRDGSLTDSDQLKKDLNKLQELRVCDWLRSLSFRIPDSDVVMVATKC--DLAAGMAADAAARMAGGAGNWIESWSDAQMTAVRV--EDGVNLTSCF------ASTPNEDGGAALGTRESPEEQSTWACDWSDGM--CVESQPSLLHRVMYNNKGELRGASLVLPRSWNIGLGVLDALGSGRDPVESAQQMV----LASGGPKGAAEVVPAVYQRNQGVGGLTRADLSTKWNDVVAALEEDGVSIVNPDHALEGALLIREHEGSLV-RHETYVFLDVTWLAQILKPLLNHRDDEDPLRGDVSLGDTGITLKEDKHIASWNRLKGHGVLEPELAGVLWPDGLSNYVLPTLDSLGLTYPLDDDPAEGLVVLLRLDEKRPEDVGKELDDFRRDHTAVLSVKWKIFLGVPPGAIEKMLTRCCRLGTLRTFWRFGVLVQGSLGGGMAAKTFALLIEYSHDTCEVDMEVYGSIRTAAPWAALSYGISVFQAMCSEFPGLRWRASLKCPQHEQDMQISRTATRRGDKLLHGATCNLCDSETGGLG----AAAIDLLEMVDIRRSRGDLVR--AVNRRLVKAQGRYPVLCLGATRALHPELAHRLSDAWWEGVKEDISGILRGARGPSDGEAVASTASVASDEMARLERLVTDLQ------QQVGRQHQDVREQI--------GAVDTRLVDMIDADDGVMGRLDFLVVMMMAMRRDGFETPRRACVLPPWNFAQGHG-LSAKEQAPERWVKRLGQWREDDFKQGKGVFKKKMRLFLVC----AATHRLVPCGPNGQGYDIQHPRTWFRMSVSVATFVLQVVCATLAAIAAAPLSGAGALAEETFSAALGSMESMLKAQLAGQTLDDGGVDAAAETQLDGGAYASLRVFIHGVEDTARHEIAKATKKAHRERRAPPSSSEFVFFEQKMVQVQRRDGDAAAQWVLKEHESAWYDQTR 1238
BLAST of mRNA_S-dermatodea_contig1035.256.1 vs. uniprot
Match: D7FL98_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL98_ECTSI) HSP 1 Score: 520 bits (1340), Expect = 5.480e-162 Identity = 402/1093 (36.78%), Postives = 536/1093 (49.04%), Query Frame = 1
Query: 1 SVAASSFPQPLRELLVMLHNLPSIDLFENRWETPAEAVVKKGLSAVSGYFTDLLAEPFR-VRQSSIEVVLIGQKGAGKTSLRQSIRTRKPTHTSGSQESTVKTYLVVYLFHGVIVDVSSCLAMHQVAYTGLLQLFLSPRAVRVLVCNTKRFGQRASDLGDSEQLAQDCRIFQKLRVCAWLAGLSFRVPDSDVIVVATKTKYDLAEGMATYMAGRMESAFRSACRIGPDKG*SLFVWKKA*I*RAAQPQRWKGDNTRRLWRTLGT------LCGRATGATTCATTPPELV--VPIKGQQQRRSSTGYYGTPSELERRP*DARCSGERQAST*FCLVGLPHIEGGGGQGRL-VESQILQG--GIRGRTRREVGAR---------GGRCGCREHQPRVGGRVVDQ*VRGHAGSARDLHLS*CHLPGHHSQTPPEPQG*RRSFD----GSICLGDTHITLEDDNHIASWKRLKEQGVLETELTRVLWPNGLSNDVLPTLDSLGLTHPLDGDAADGLVVLLTLEEQRPDLVGKELDDFRGDHTAVLSVRWNMFLGVPPGAIESCSRGDAALALSKRFGALACLCKVEVVGKI----FALLAEYSHEESRIVMEVYGKVCTTAPWAALTHGISAVRAMCADYPGLRWRVFVKCSSHRKEMKINTAVTRPTGGSS*VHEVAVLVTLRQADWERRRWNLSE-----------WSTYVRTGWRCSEKWKTCSSKSSAET-PPFAWRKADA--SGVTRGCSDLTRA*R-----H*ETS*KSFLVP*RHRFKRS*PLLRACWMYWDSVXXXXXXCTTKICTRCGGGLGCTHGRFAEVIAANEDVMQMAGFLATIPMTVRGASIDTPRRACILPPWKFANPSGDLSDDEQQPENWVRRLREWQDDGFKWGKGISKQPSACFWCVRRQTGSCHVDLPAKNTISGM----PANGFEWCVPRSERCWLLRCRGWVLRLRKPFPRGGTY**GSWRGSWKGFVWTTVQQRWACIPSS*RG--------------ALSS*LRTFVHGVGENAIRELADKTKSAFKNRRPRSSSSEFVNFA*GMTKVQRRDGDADAQWVLKGHESAWYDAVR 3081
++A ++ P+ L LL L L + + EN W+ P EAVV KG+SAV YFTDL AE V + I+VVL+GQ+GAGKTSLRQS+RT +PT TSGS+ESTV+ + +GV + V C QVAYTGLLQ+FLSPRAV +LVC+ FGQR L S+QL +D Q+LRVC WL LSFR+PDSDV+VVATK DLA GM T AGR+E A G + + + P D L + C G + + P L+ V + R ++ + DA SG + V + GG +G V + Q G+ G TR ++ + G + + G ++ +R H GS H + L +P R + G + LGDT ITL++D HIASW RLK GVLE L RVLWP+GLSN VLP LDSLGLT+PLD D A+GLVVLL L+E+RP+ VGKELDDFR DHTAVLSV+W +FLGVPPGAIE L + F L + + G I FAL+ EYSH++ + M+VYG + T APWAAL+ GIS +AMC+++PGLRWR +KC H ++M+I+ A TRP G S L + +L E + + +++ +++ P A R+ DA GV D+ R R S S R +R L+ V +I G R ++I A++ VM FL + M +R DTPRRAC+LPPW FA G LSD+EQ P+ WV+RL +W++D FK GKG+ K F + H +P G P F V + + C P G ++ + G + + ++ + A + G A + LR F+HGV + A E+A TK A + RR SS EFV F M +VQRRDGDA QWVLK HESAWYD R
Sbjct: 221 NLAGNALPKQLEALLATLSRLGFL-VHENPWQEPPEAVVSKGISAVQEYFTDLFAEGIAPVGRKMIKVVLVGQEGAGKTSLRQSLRTGRPTPTSGSEESTVQIDVEQMDVNGVTLRVYDCAG--QVAYTGLLQMFLSPRAVSLLVCDLGAFGQRDGTLIHSDQLKKDLSKLQELRVCDWLRSLSFRIPDSDVVVVATKC--DLAAGMGTDAAGRIEGAIGEWLESWSGAGMNAVHVEDGVSLTSCFPPTPNEDGGAALGKRKSPDEDSTWACDWREGVS--VESQPSLLHRVMYNSKGNVRGASLVLPRSWNIALEVLDALGSGRNPVESAQQNV----LASGGPKGATEVVPAVYQRNQGVGGLTRADLSTKWNEVVAALEGDGVSVVKPDHALEGALL---IREHEGSLV-RHETYVFLDVTWLAQILKPLLNHRDDEDPLRGDVSLGDTGITLKEDKHIASWNRLKGHGVLEPSLARVLWPDGLSNYVLPALDSLGLTYPLDDDPAEGLVVLLRLDEKRPEDVGKELDDFRRDHTAVLSVKWKVFLGVPPGAIEKMLTRCCRLGTLRTFWRFGVLVQGSLGGGIAARTFALVVEYSHDKCEVDMKVYGSISTAAPWAALSFGISVFQAMCSEFPGLRWRAALKCPQHEQDMQISKAATRP-GDKSLFGATCSLCDSKTGGLGAAAMSLLEIVDVHECVDKIFQEVAGRLVQAQDRYPVLRPEAARGLHPEQAQRRFDAWWDGVKEEMGDMLRGARGPIGGEAAGSTASVASAEVARLERLVNDLQ------QQVGQQHQDVRERI--------GAVDTRLVDMIDADDGVMGRLDFLVVMMMAMRREGFDTPRRACVLPPWDFAQGHG-LSDEEQAPDCWVKRLGQWREDDFKQGKGVFKTKMRLFLVC----AATHRLVPCGPNGQGYDIQHPRTWFRMSVSVATFVLQVVCATLAAIAAAPLSGAGALAEETFSAA-LGSMESMLEAQLAGLTLDDGGVDAAAKTQAAQLNAAAYTSLREFIHGVEDTARLEIAKATKKANRERRAPPSSPEFVFFEQKMVQVQRRDGDAAVQWVLKEHESAWYDQTR 1277
BLAST of mRNA_S-dermatodea_contig1035.256.1 vs. uniprot
Match: A0A6H5JME6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME6_9PHAE) HSP 1 Score: 471 bits (1213), Expect = 8.940e-143 Identity = 397/1122 (35.38%), Postives = 528/1122 (47.06%), Query Frame = 1
Query: 7 AASSFPQPLRELLVMLHNLP-SIDLFENRWETPAEAVVKKGLSAVSGYFTDLLAEPFRVRQSSIEVVLIGQKGAGKTSLRQSIRTRKPTHTSGSQESTVKTYLV-VYLFHGVIVDVSSCLAMHQVAYTGLLQLFLSPRAVRVLVCNTKRFGQRASDLGDSEQLAQDCRIFQKLRVCAWLAGLSFRVPDSDVIVVATKTKYDLAEGMATYMAGRMESAFR-----------SACRI------------GPDKG*SLFVWKKA*I*RAAQPQRWKGDNTRR-----LWRTLGTLCGRATGATTCATTPPEL-VVPIKGQQQRRSSTGYYGTPSELERRP*DARCSGERQAST*FCLVGLPHIEGGGGQGRLVESQILQGGIRGRTRREVGARGGRCGCREHQPRVGGRVVDQ*VRGHAGSARDLHLS*CHLPGHHSQTPPEPQG*RRS---FDGSICLGDTHITLEDDNHIASWKRLKEQGVLETELTRVLWPNGLSNDVLPTLDSLGLTHPLDGDAADGLVVLLTLEEQRPDLVGKELDDFRGDHTAVLSVRWNMFLGVPPGAIES-----CSRGDAALALSKRFGALACLCKVEVV-GKIFALLAEYSHEESRIVMEVYGKVCTTAPWAALTHGISAVRAMCADYPGLRWRVFVKCSSHRKEMKINTAVTRP----------------TGG-SS*VHEVAVLVTLRQ------ADWERRRWNLSEWSTYVRTGWRCSEKWKTCSSKSSAETPPFAWRKADASGVTRGCSDL---TRA*RH*ETS*KSFLVP*--------RHRFKRS*PLLRACWMYWDSVXXXXXXCTTKICTRCGGGLGCTHGRFAEVIA-ANEDVMQMAGFLATIPMTVRGASIDTPRRACILPPWKFANPSGDLSDDEQQPENWVRRLREWQDDGFKWGKGISKQPSACFWCVRRQTGSC---HVDLPAKNTISGMPANGFEWCVPRS--ERCWLLR--CRGWVLRLRKPFPRGGTY**GSWRGSWKGFVWTTVQQRWACIPSS*RG--------------------ALSS*LRTFVHGVGENAIRELADKTKSAFKNRRPRSSSSEFVNFA*GMTKVQRRDGDADAQWVLKGHESAW 3066
A S P+ L LL + L ++ L N W+ P EAVVK G++A S YF DL E VR++ I+VVL+GQ+GAGKTSLRQSIR+RKPT TSG ESTV+ + + + GV + + C QVAYTGLLQ+FLSPRAV +LVCNT+ FG+R L +D Q+LRVC+WL LSFR+PDSDV+ VATK D A GMA MA RME A R +A R+ P + + + K+ + W+ D L R + G GA + +V + R + +G R +G R+ C P R + IR RR + G R E +PR+G ++Q + GS H + L +P R F GS+ LGDT ITL+ SW+R K+ GVL+ EL +LWP L + VL TL+SLGL H LD A GLVVLL L ++RP VGKELDDFR DH A+ SV W + +GVPPGA+E CS G+ L RFG L V GK FA+L EYSH+ S I ++VYG + TTAPWAAL+ GISAVR MC+ +PGLRW +KC H+++M I+ TRP TGG + E+ +V + Q + R +L +R S ++ + ++ ET R+ +A+G+ RG D+ T+A + S S V +H+ +++ +R W+ G E I A+ M+ FL + M VR IDTPR+AC+LP W FA G LS+ EQ PE WV+RL EW++D FK GKG+ FW +R C H +P G +S + L+ C P G G V TV + + S G A +S LR F+HGV ++A E+ TK A K RR SSSEFV F+ MT+VQR DGDA QWVLKG E AW
Sbjct: 322 AGGSIPKQLDGLLTLFRKLERNLSLEGNPWKEPPEAVVKTGMAAASAYFADLFEEGVSVRRNMIKVVLVGQEGAGKTSLRQSIRSRKPTPTSGPAESTVQIDVEEIEMDDGVSLRIYDCAG--QVAYTGLLQMFLSPRAVTLLVCNTEAFGERGGYPAGGNPLNEDLYKLQELRVCSWLRSLSFRIPDSDVVAVATKC--DRAAGMAVVMAERMELAIRKWLREWSRSQMTAVRVEDGVSLTSCVPSAPQERDGIALGKRKSPEDSMWACDWRQDTPGEPLPSLLHRVIYNSKGHIRGAALVLPRSWNIALVVLDALGNGRQGSRRFGARDGRR----GGRATGTRRGD---CREIDPAA-------RWNRGYNMGRPIREMERRRSSSEGRRSNSHEPRPRLGRGALNQ--AQYEGSLV-RHETYVFLDVTWLAKILKPLLNHREDEDFFGSLSLGDTGITLDGHKDKVSWQRFKQTGVLKPELAGLLWPGDLCDYVLRTLESLGLAHQLDDRFAGGLVVLLRLGKERPASVGKELDDFRRDHEAIFSVTWKISMGVPPGAVEKVLTRCCSIGE--LRTFWRFGVLVQGNMGGVTAGKTFAMLVEYSHKGSEIDIKVYGNIATTAPWAALSLGISAVRVMCSAFPGLRWCASLKCPEHKQDMPISNTATRPGDKLLLEHGCTLCSSETGGVGAAATELLQMVDVLQNRDKMFREVHGRFVDLQRQYPVLRP--EKSREFNSEQARRRFETWLTGMRE-EAAGLLRGGGDVGESTKAGERGDISGVSDDVAKLPQLVGHLQHQLEQNQKDVRG-WL----------------------------GEVLEAIVDADAGAMKQREFLVAMLMKVRSEGIDTPRQACVLPEWNFAQSHG-LSEHEQTPEVWVKRLHEWREDDFKQGKGV-------FWKKKRLFLLCAHTHRLVPCGPKGQGYDIQQLRTWARKSISATAFALQVVCSTLAAMAAAPXXXXXXXXAG-------GVVEATVSEALGSLQSKLEGLTLEDDKLNVDHQTANLEGNAYAS-LREFIHGVEDDARVEIFKATKKAHKERRAPPSSSEFVFFSQKMTQVQRHDGDAAVQWVLKGQEDAW 1372
BLAST of mRNA_S-dermatodea_contig1035.256.1 vs. uniprot
Match: D8LF46_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF46_ECTSI) HSP 1 Score: 322 bits (824), Expect = 5.180e-89 Identity = 257/694 (37.03%), Postives = 342/694 (49.28%), Query Frame = 1
Query: 1 SVAASSFPQPLRELLVMLHNLPS--IDLFENRWETPAEAVVKKGLSAVSGYFTDLLAEPFRVRQSSIEVVLIGQKGAGKTSLRQSIRTRKPTHTSG-SQESTVKTYLVVYLFHGVIVDVSSCLAMHQVAYTGLLQLFLSPRAVRVLVCNTKRFGQR--ASDLGDSEQLAQDCRIFQKLRVCAWLAGLSFRVPDSDVIVVATKTKYDLAEGMATYMAGRMESAFRSACRIGPDKG*SLFVWKKA*I*RAAQPQRWKGDNTRRLWRTLGTLCGRATGATTCATTPPELVVPIKGQQQRRSSTGYYGTPSELERRP*DARCSGERQAST*FC--LVGLPHIEG-GGGQGRLVES-----QILQGGIRGRTRREVGARGGRCGCREHQPRVGGRV------------------VDQ*VRG-----HAGSARDLHLS*CHLPG---HHSQ-------------TPPEPQG*RRSFDGSICLGDT---HITLEDDNHIASWKRLKEQGVLETELTRVLWPNGLSNDVLPTLDSLGLTHPLDGDAADGLVVLLTLEEQRPDLVGKELDDFRGDHTAVLSVRWNMFLGVPPGAIES-----CSRGDAALALSKRFGALACLCKVEVVGK-IFALLAEYSHEESRIVMEVYGKVCTTAPWAALTHGISAVRAMCADYPGLRWRVFVKCSSHRKEMKINTAVTR 1899
S++ + P L LL +L +PS + L N W P E+VV KG ++ GYF DL AEP R+ +SS++VVL+GQ+GAGKTSLRQS++ K + T ++ESTV + G V V C QVAYTGLLQ+FL+PR+V VLVCN FGQR + D G+ EQ +DCR ++LRVC WL +S RVPD+DVI+VATK DL G A + RME++ R+ W + QP R + +C T+C PI+ + S G + D R + Q S F LV P G G Q L S +L+ GR EV R R + GG+ VD+ R + +A + LS G H + P +R+FDG + LGDT ITL D + I SW RLK +GVLE L +WP+GLS VLPTL S+GLT PL+GD GLVVLL LE RP+ VG+ +D F HT S W +FLGVPPGAIE C GD R+G L ++ G+ IFA++ EYS ++ + +++G + T APW AL++ +SAV M D+PGLRW+ +KC H EM V R
Sbjct: 342 SMSGGTMPSQLCRLLDVLDPVPSRYVGLGGNPWTEPPESVVAKGPKSIRGYFEDLYAEPCRITRSSVKVVLVGQEGAGKTSLRQSMKANKASPTGKWNEESTVFANVEPMELDGSSVRVYDCAG--QVAYTGLLQMFLTPRSVCVLVCNAGEFGQRRGSEDCGEVEQ--EDCRKLEELRVCDWLRSISRRVPDNDVILVATKC--DLVGGNAGEIGSRMENSCRT--------------WLSGWVRNGMQPVRLEPH-----------VC-----LTSC--------FPIRVGEHGERSAGNHVWKGGWAC---DWRNVEDDQPSPSFLHRLVNKPDGRGLRGAQMVLPRSWDVALAVLEALEHGRDPVEVVLRKSPEPDRGDETETGGKADVYQGITVEELGTKWQETVDELERRGITVTNMMNALEGALSIREFDGSLVRHEKFVFLDVVWLSRILKPLLNHKDQRTFDGRVKLGDTGDTRITLHDQSDIDSWDRLKSEGVLEPRLANAMWPHGLSEYVLPTLVSVGLTFPLEGDPDAGLVVLLRLEPHRPESVGEVIDTFCSKHTPAFSASWEIFLGVPPGAIEKVLTRCCGLGDVQTFW--RYGVLVHGGLGDLDGRGIFAVVVEYSSTDNELTAQIFGDISTPAPWVALSYVMSAVSLMLVDFPGLRWKGCLKCPQHGNEMPFANKVNR 986
BLAST of mRNA_S-dermatodea_contig1035.256.1 vs. uniprot
Match: D7FZA1_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA1_ECTSI) HSP 1 Score: 315 bits (807), Expect = 4.200e-88 Identity = 250/686 (36.44%), Postives = 335/686 (48.83%), Query Frame = 1
Query: 16 SFPQPLRELLVMLHNLPSIDL--FENRWETPAEAVVKKGLSAVSGYFTDLLAEPFRVRQSSIEVVLIGQKGAGKTSLRQSIRTRKPTHTSG-SQESTVKTYLVVYLFHGVIVDVSSCLAMHQVAYTGLLQLFLSPRAVRVLVCNTKRFGQRASDLGDSEQLAQDCRIFQKLRVCAWLAGLSFRVPDSDVIVVATKTKYDLAEGMATYMAGRMESAFRSACRIGPDKG*SLFVWKKA*I*RAAQPQRWKGDNTRRLWRTLGTLCGRATGATTCATTPPELVVPIKGQQQRRSSTGY-----------------YGTPSELER---RP*DARCSGERQA---ST*FCLVGLPHIEGGGGQGRLV-------ESQILQGGIRGRTRREVGARGGRCGC--REHQPRVGGRVVDQ*VRGHAGSARDLHLS*CHLPG---HHSQ-------------TPPEPQG*RRSFDGSICLGDT---HITLEDDNHIASWKRLKEQGVLETELTRVLWPNGLSNDVLPTLDSLGLTHPLDGDAADGLVVLLTLEEQRPDLVGKELDDFRGDHTAVLSVRWNMFLGVPPGAIES-----CSRGDAALALSKRFGALACLCKVEVVGK-IFALLAEYSHEESRIVMEVYGKVCTTAPWAALTHGISAVRAMCADYPGLRWRVFVKCSSHRKEMKINTAV 1893
+ P L LLV+L L ++L N W P E++V KG ++ GYF DL AEP +++SS++VVL+GQ+GAGKTSLRQS++ K T T +ESTV + G V V C QVAYTGLLQ+FL+PR+V VLVCN FGQ+ + +Q+ +DCR Q LRVC WL +S RVP +DVI+VATK DL G A R+E A CR+ W + P R + T+C PI + S+TG +PS L R +P + G + S L L +E G +V E + + G+ G+T + G RE +G R + V +A +A + LS G H + P +R+FDG + LGDT ITL+D + IASW RLK +GVLE L +WP+GLS VLPTL SLGLT PL+GD +GLVVLL LE RP VG+ +D F +T S W +FLGVPPGAIE C GD R+G L ++ G+ IFA++ EYS + + +++G + T+APW AL++ SAV M D+PGLRW +KC H EM T V
Sbjct: 64 AMPSQLCRLLVVLDRLSGVNLALLGNPWAEPPESIVAKGPKSIRGYFEDLYAEPCWIKRSSVKVVLVGQEGAGKTSLRQSMKANKATPTGEWKEESTVFADVEPMELEGSSVRVYDCAG--QVAYTGLLQMFLTPRSVCVLVCNAGEFGQQLGS-DNVDQVEEDCRKLQALRVCDWLRSISRRVPGNDVILVATKC--DLVSGNAEETGRRLEHA----CRM----------WLSTWVRNGMDPVRLEPH----------------VSLTSC--------FPIGDGEHGESNTGSDASKQGWACDWRHVEGDKSSPSLLYRLVNKPDEGGLRGVQMVLPRSWDIALTVLEALEHGRDPVEMVLLKSPDSERRPTETGV-GKTNVYQAIKVEELGTNWRETVDELGKRGI---VVTNAENALEGALSIREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQRTFDGRVNLGDTGDARITLDDSSDIASWGRLKNEGVLEPRLAYAMWPDGLSEYVLPTLASLGLTFPLEGDPDNGLVVLLRLEPNRPASVGEAIDTFCSKYTPAFSASWEIFLGVPPGAIEKVLTRCCGLGDVQTFW--RYGVLVHGGLGDLDGRGIFAVVTEYSSTNNELTAQIFGDISTSAPWVALSYVTSAVSLMLMDFPGLRWNGSLKCPQHGYEMPFATKV 700
BLAST of mRNA_S-dermatodea_contig1035.256.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI) HSP 1 Score: 314 bits (804), Expect = 1.350e-86 Identity = 247/689 (35.85%), Postives = 338/689 (49.06%), Query Frame = 1
Query: 1 SVAASSFPQPLRELLVMLHNLP---SIDLFENRWETPAEAVVKKGLSAVSGYFTDLLAEPFRVRQSSIEVVLIGQKGAGKTSLRQSIRTRKPTHTSG-SQESTVKTYLVVYLFHGVIVDVSSCLAMHQVAYTGLLQLFLSPRAVRVLVCNTKRFGQRASDLGDSEQLAQDCRIFQKLRVCAWLAGLSFRVPDSDVIVVATKTKYDLAEGMATYMAGRMESAFRSACRIGPDKG*SLFVWKKA*I*RAAQPQRWKGDNTRRLWRTLGTLCGRATGATTCATTPPELVVPIKGQQQRRSSTGYYG-------------TPSELER---RP*DARCSGERQA---ST*FCLVGLPHIEGGGGQGRLVESQILQ---GGIRGRTRREVGARGG------RCGCREHQPRVGGRVV-----DQ*VRGHAGSARDLHLS*CHLPGHHSQT------------PPEPQG*RRSFDGSICLGDT---HITLEDDNHIASWKRLKEQGVLETELTRVLWPNGLSNDVLPTLDSLGLTHPLDGDAADGLVVLLTLEEQRPDLVGKELDDFRGDHTAVLSVRWNMFLGVPPGAIESCSRGDAALALSKRFGALACLCKVEVVGK----IFALLAEYSHEESRIVMEVYGKVCTTAPWAALTHGISAVRAMCADYPGLRWRVFVKCSSHRKEMKINTAVTR 1899
S+ SFP+ L LL +L ++L +N W P E++V KG + GYF DL AEP RV++SS++++L+GQ+GAGKTSLR+S++ ++ T T +ESTV + G + V C QVAYTGLLQ+FL+PRAV V+VCN + FGQ+ Q+ +DCR ++LRVC WL +S RVPD+DVI+VATK D G A + R+E A R +W + + QP R + +C T+C TT V G++ R+ G +PS L R +P G + S L L +E G +V + G G + G G R +E + GR + D + G A + R+ S L H + P +FDG + LGDT +TLED + IASW RLK +GVLE L R LWPNGLS V+PT+ SLGLT PL+ D A GLVVLL LE RP+LVGK +D F D T L W +FLGVP GAIE +L + F L V + IFA++ EYS ++ + +++G + T APW AL++ +SAV M D+PGLR R +KC H M + VTR
Sbjct: 270 SMQGGSFPRQLCRLLDVLDRAEREVDLNLDDNPWAEPPESIVAKGAKNIRGYFEDLYAEPCRVQRSSVKIILVGQEGAGKTSLRKSMKAKEATPTGEWKEESTVFADVERMELEGSSIRVYDCAG--QVAYTGLLQMFLTPRAVCVIVCNAESFGQQRGTCETGGQVKEDCRKLEELRVCDWLRSISRRVPDNDVILVATKC--DSVGGNAGEIGKRIELASR--------------MWLASWVRSGMQPVRLEPG-----------VC-----LTSCCTTN----VCEDGERSTRNQAMEGGWTCDWRDGKDDNPSPSLLHRLVNKPDGGGLRGAQMVIPRSWDIALTVLEALERGRDPVEMVVEDLGDADGGDATGTAACKTGLYHGITAEDLRTKWQEAAVGLAGRDITVTNADNALEG-ALAIREFDGS---LVRHETFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDTRVTLEDPSDIASWGRLKNEGVLEPRLARKLWPNGLSEYVIPTIASLGLTFPLENDPAGGLVVLLRLEHDRPELVGKVIDTFCLDQTPALRASWKIFLGVPAGAIEKVLTRCCSLGGVQTFWRSGVLVHGGVGEQDRSGIFAVVLEYSPSDNELTAQIFGDISTPAPWVALSYVVSAVSLMLLDFPGLRSRGSLKCPQHGDAMPLANMVTR 916
BLAST of mRNA_S-dermatodea_contig1035.256.1 vs. uniprot
Match: A0A6H5KSZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ8_9PHAE) HSP 1 Score: 303 bits (776), Expect = 3.720e-84 Identity = 251/720 (34.86%), Postives = 342/720 (47.50%), Query Frame = 1
Query: 4 VAASSFPQPLRELLVMLHNLP-----SIDLFENRWETPAEAVVKKGLSAVSGYFTDLLAEPFRVRQSSIEVVLIGQKGAGKTSLRQSIRTRKPTHTSG-SQESTVKTYLVVYLFHGVIVDVSSCLAMHQVAYTGLLQLFLSPRAVRVLVCNTKRFGQRASDLGDSEQLAQDCRIFQKLRVCAWLAGLSFRVPDSDVIVVATKTKYDLAEGMATYMAGRMESAFRSACRIGPDKG*SLFVWKKA*I*RAAQPQRWKGDNTRRLWRTLGTLCGRATGATTCATTPPELVVPIKGQQQRRSSTGYY---------------GTPS-----ELERRP*DARCSGERQA---ST*FCLVGLPHIEGGGGQGRLV------------------ESQILQG------GIRGRTRREVGARGGRCGCREHQPRVGGRVVDQ*VRGHAGSARDLHLS*CHLPGHHSQTPPEPQG*RRSFDGSICLGDT---HITLEDDNHIASWKRLKEQGVLETELTRVLWPNGLSNDVLPTLDSLGLTHPLDGDAADGLVVLLTLEEQRPDLVGKELDDFRGDHTAVLSVRWNMFLGVPPGAIESCSR---GDAALALSKRFGALACLCKVEV-VGK--IFALLAEYSHEESRIVMEVYGKVCTTAPWAALTHGISAVRAMCADYPGLRWRVFVKCSSHRKEMKINTAVTRPTGGSS*VHEVAVLVTLRQADWERRR 1977
++ P L LL +L ++ S+ L N W P E +V KG AV GYF DL AEP R+++S ++VVL+GQ+GAGKTSLRQS++ + T T +ESTV + G V V C QVAYTGLLQ+FL+PRAV VLVCN +FGQ+ ++Q+ +DCR ++LRVC WL +S RVP++DVI+VATK DLA G A + RME A R W + + QP R + T+C E V G+ SSTG + G PS L +P G + S L L +E G +V E+ + QG I+ + + R G G ++ + + + L L P + +FDG + LGDT ITL+D + IASW RLK QGVLE L +WPNGLS VLP L LGLT PL+ D A GLVVLL L+ RP+ VG +D F DHT LS W +FLGVPPGAIE G + R+G L EV VG+ IFA++ EYS ++ + +++G + T APW L++ +SAV M D+PGLRWR + C H M + + G + ++ +V +R+ +RRR
Sbjct: 126 MSGGPMPSQLCRLLDVLDDIQQGKFQSLKLGTNPWVEPPEPIVVKGPKAVRGYFEDLYAEPCRIKRSIVKVVLVGQEGAGKTSLRQSMKANEATPTGEWKEESTVFADVEAMELEGSSVRVYDCAG--QVAYTGLLQMFLTPRAVCVLVCNAGKFGQQTRS-ESNDQVGEDCRKLEELRVCDWLRSISRRVPNNDVILVATKC--DLAGGNAGKIGARMEHACRR--------------WLSSWVRNGLQPVRLEP----------------CVSLTSCF----ETGVGEHGE----SSTGSHELKGGWACDWRDMADGNPSPSLLHRLVNKPDGRGLRGTQMVLPRSWDIALTVLEALEHGRDPVEVVLRKSPDPDRGDATETARGETAMYQGITVEDLSIKWQETVDGLERSGVTVTNAKNALEGALLIREFDGSLIRYEKFIFLDVVWLAK--ILKPLLNHKDQETFDGLVSLGDTGDARITLDDPSDIASWGRLKSQGVLEPRLAYAIWPNGLSEYVLPALAFLGLTFPLEDDPAKGLVVLLRLKPDRPESVGHAIDTFCLDHTPALSASWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLGEVHVGRRGIFAVVLEYSSTDNELAAQIFGDISTPAPWVVLSYVMSAVSLMLLDFPGLRWRGSLTCPQHGDTMLLANKASPVAGLGAAAIDLVRMVDIRR---DRRR 797
BLAST of mRNA_S-dermatodea_contig1035.256.1 vs. uniprot
Match: D7G431_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G431_ECTSI) HSP 1 Score: 302 bits (774), Expect = 3.060e-83 Identity = 243/689 (35.27%), Postives = 336/689 (48.77%), Query Frame = 1
Query: 4 VAASSFPQPLRELLVMLHNLPSIDLFENRWETPAEAVVKKGLSAVSGYFTDLLAEPFRVRQSSIEVVLIGQKGAGKTSLRQSIRTRKPTHTSG-SQESTVKTYLVVYLFHGVIVDVSSCLAMHQVAYTGLLQLFLSPRAVRVLVCNTKRFGQRASDLGDSEQLAQDCRIFQKLRVCAWLAGLSFRVPDSDVIVVATKTKYDLAEGMATYMAGRMESAFRSACRIGPDKG*SLFVWKKA*I*RAAQPQRWKGDNTRRLWRTLGTLCGRATGATTCATTPPELVVPIKGQQQRRSSTGYYGT-----------------PSELER---RP*DARCSGERQA---ST*FCLVGLPHIEGGGGQGRLVESQILQGGIRGRTRREVGARGGRCGCR-----EHQPRVGGRVVDQ*VRG-----HAGSARDLHLS*CHLPG----HHSQT------------PPEPQG*RRSFDGSICLGDT---HITLEDDNHIASWKRLKEQGVLETELTRVLWPNGLSNDVLPTLDSLGLTHPLDGDAADGLVVLLTLEEQRPDLVGKELDDFRGDHTAVLSVRWNMFLGVPPGAIESCSR---GDAALALSKRFGALACLCKVEVVGK-IFALLAEYSHEESRIVMEVYGKVCTTAPWAALTHGISAVRAMCADYPGLRWRVFVKCSSHRKEMKINTAVTR 1899
++ S P L LL +L I L N W P E++V KG ++ YF DL AEP R+ + S +VVL+GQ+GAGK+SLRQS++ +PT T +ESTV + G V V C QVAYTGLLQ+FL+PR+V VLVCN FGQ+ + +S ++ +DCR ++LRVC WL +S RVP +DVI+V TK DLA G A + R+E A R+ W + + QP + + T+C P +G Q T +G+ PS L R +P G + S L+ L +E QGR +L+ + GG E + ++VD+ R +A +A + LS G H + P + +FDG + LGDT ITL+D +IASW RLK +GVLE L +WP GLS VLPTL SLGLT PL+GD +G VVLL L+ +RPD VG+ +D F HT LS WN+FLGVPPGAIE G A+ R+G L ++ G+ IFA++ EYS + ++ +++G + T APW AL++ +SAV M D+PGLRW +KC H M + VT+
Sbjct: 82 MSGGSMPGQLCRLLDVLERA-KIVLDGNPWAEPPESIVDKGRKSMRSYFEDLYAEPCRIERISTKVVLVGQEGAGKSSLRQSMKANEPTPTGEWKEESTVFADVEPMELEGSSVRVYDCAG--QVAYTGLLQMFLTPRSVCVLVCNAAAFGQQL-ERKNSGEVEEDCRKLEELRVCDWLRSISRRVPHNDVILVVTKC--DLAGGNAAEIGERVEHACRT--------------WLSSWVRHGMQPVQLEPG----------------VSFTSC--------FPAEGGQHGEVGTENHGSKGDWACDWHDMKDDHPPPSLLHRLVNKPDGGGLRGAQMVLPRSWDTVLIVLDSLE----QGRDPVEVVLRKSLHPDRGDATETAGGNTVVYQGITVEDLSKKWQKIVDELERRGIIVTNAKNALEGALSIREFDGSLVRHETFVFLDVLWLARILKPLLNHKDQETFDGRVNLGDTGDARITLDDPLYIASWGRLKNEGVLEPRLAYAMWPGGLSEYVLPTLASLGLTFPLEGDLDEGQVVLLRLKPERPDSVGEVIDTFCSRHTPALSASWNIFLGVPPGAIEKVLTRCCGLGAVQTFWRYGVLVHGGLGDLGGRGIFAVVLEYSSTDHKLNGQIFGDIGTPAPWVALSYVMSAVSLMLVDFPGLRWGGALKCPQHGDAMLMANKVTQ 722
BLAST of mRNA_S-dermatodea_contig1035.256.1 vs. uniprot
Match: D7FUC3_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC3_ECTSI) HSP 1 Score: 303 bits (777), Expect = 6.070e-83 Identity = 240/664 (36.14%), Postives = 326/664 (49.10%), Query Frame = 1
Query: 4 VAASSFPQPLRELLVMLHNLPS--IDLFENRWETPAEAVVKKGLSAVSGYFTDLLAEPFRVRQSSIEVVLIGQKGAGKTSLRQSIRTRKPTHTSG-SQESTVKTYLVVYLFHGVIVDVSSCLAMHQVAYTGLLQLFLSPRAVRVLVCNTKRFGQ-RASDLGDSEQLAQDCRIFQKLRVCAWLAGLSFRVPDSDVIVVATKTKYDLAEGMATYMAGRMESAFRSACRIGPDKG*SLFVWKKA*I*RAAQPQRWKGDNTRRLWRTLGTLCGRATGATTCA-------TTPPELVVPIKGQQQRRSSTGYYGTPSELERRP*DARCSGERQAST*FCLVGLPHIEGGGGQGRLVESQILQ-GGIRGRTRREVGARGGRCGCREHQPRVGGRVVDQ*VRGHAGSARDLHLS*CHLPGHHSQT------------PPEPQG*RRSFDGSICLGDT---HITLEDDNHIASWKRLKEQGVLETELTRVLWPNGLSNDVLPTLDSLGLTHPLDGDAADGLVVLLTLEEQRPDLVGKELDDFRGDHTAVLSVRWNMFLGVPPGAIESCSRGDAALALSKRFGALACLCK----VEVVGKIFALLAEYSHEESRIVMEVYGKVCTTAPWAALTHGISAVRAMCADYPGLRWRVFVKCSSHRKEMKINTAVTRP 1902
++ P L LL +L + L +N W P E++V KG ++ GYF DL AEP RV +SS++V+L+GQ+GAGKTSLRQS++T + T T +ESTV + G V V C Q AYTGLLQ+FL+PR+V VLVCN + FGQ RA+D G Q+ +DCR ++LRVC WL ++ RVPD+D I+VATK DL G A + RME A R G + + +P R+ G++ R GT G C + P L+ + + G GT L R A E S + + H G G+G E GG +G T ++ A+ + + + G A S R+ S L H + P SFDG + LGDT +TLED I SW RLK +GV+E L LWP+GLS VLPTL SLGLT PL+ D A+GLVVLL + P+ VGK +D F +H S W +FLGVPPGAIE L + F A + ++FA++ EYS + + +++G + T PW AL++ +SAV M D+PGLR R +KC H M + T V RP
Sbjct: 201 MSGGRIPSQLCRLLDVLDRAEGGVLSLEDNPWAEPPESIVAKGPKSIRGYFEDLYAEPCRVERSSVKVILVGQEGAGKTSLRQSMKTNEATPTGDWKEESTVFADVEPMELEGSSVRVYDCAG--QAAYTGLLQMFLTPRSVCVLVCNAEAFGQQRANDTGG--QIMEDCRKLEELRVCEWLRSIARRVPDNDAILVATKC--DLVGGNAAEVGRRMEQACRMWLASWVRNGMQPVRLEHGVGLTSCRPTRF-GEHGER-----GTANHTVEGGWVCDWRGHIGDDSAPGLLHRLVNKPD---GGGLRGTQLVLPRSWDIALTVLEALESGRDPVEVVMHKLGNVGRGDAAEMTAANAGGYQGITVEDLIAKWLETVDELARREITVTSAKNALEG-ALSIREFDGS---LVRHETFVFLDVVWLARILKPLLNHKDEESFDGLVNLGDTGDTRVTLEDPLDIVSWFRLKNEGVIEPRLACALWPDGLSEHVLPTLASLGLTFPLENDPAEGLVVLLRQKPDCPESVGKVIDTFCSEHIPAFSASWKIFLGVPPGAIEKVLTRCCNLGGVRTFWRSAVFVHGGHGYQGGHEMFAVVLEYSSANNELTAKIFGDISTPTPWMALSYVMSAVSLMMRDFPGLRSRGSLKCPQHGDAMLLATKVPRP 845
BLAST of mRNA_S-dermatodea_contig1035.256.1 vs. uniprot
Match: D7FUC9_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC9_ECTSI) HSP 1 Score: 299 bits (766), Expect = 6.240e-82 Identity = 244/680 (35.88%), Postives = 321/680 (47.21%), Query Frame = 1
Query: 22 PQPLRELLVMLHNLPS--IDLFENRWETPAEAVVKKGLSAVSGYFTDLLAEPFRVRQSSIEVVLIGQKGAGKTSLRQSIRTRKPTHTSG-SQESTVKTYLVVYLFHGVIVDVSSCLAMHQVAYTGLLQLFLSPRAVRVLVCNTKRFGQ-RASDLGDSEQLAQDCRIFQKLRVCAWLAGLSFRVPDSDVIVVATKTKYDLAEGMATYMAGRMESAFRSACRIGPDKG*SLFVWKKA*I*RAAQPQRWKGDNTRRLWRTLGTLCGRATGATTCATT---------------------PPELVVPIKGQQQRRSSTGYYGTPSELERRP*DARCSGERQAST*FCLVGLPHIEGGGGQGRLVESQILQGGIRGRTRREVGARGGRCGCREHQPRVGGR--VVDQ*VRG----HAGSARDLHLS*CHLPG---HHSQ-------------TPPEPQG*RRSFDGSICLGDT---HITLEDDNHIASWKRLKEQGVLETELTRVLWPNGLSNDVLPTLDSLGLTHPLDGDAADGLVVLLTLEEQRPDLVGKELDDFRGDHTAVLSVRWNMFLGVPPGAIESCSRGDAALALSKRFGALACLCKV----EVVGKIFALLAEYSHEESRIVMEVYGKVCTTAPWAALTHGISAVRAMCADYPGLRWRVFVKCSSHRKEMKINTAVTR 1899
P L LL +L + L +N W P ++V KG +++ GYF DL E RV+++S++++L+GQ+GAGKTSLRQS++ T +ESTV + G V V C QVAYTGLLQ+FL+PR+V VLVCN + FGQ R D G Q+ +DCR ++LRVC WL +S RVP++DVI+VATK DL G A R+E A R+ W + + QP R + L + C A G +T PP LV + + +G GT L R S L L +E G +V + + TR G G RV + VV RG +A +A + LS G H P +FDG + LGDT +TLED IASW RLK QGVLE L R +WPNGLS VLPTL SLGLT PL D A GLVVLL L RP+ VGK +D F D T S W +FLGVP GAIE +L + F L E +IFA++ EYS ++ + +++G + T APW AL++ ISAVR M D+PGLR R +KC H M + +T+
Sbjct: 179 PSQLCRLLDVLDRATGGILGLDDNPWAEPPASIVSKGPTSIRGYFEDLYVESSRVQRNSVKIILVGQEGAGKTSLRQSMKANAAIPTGEWKEESTVFADVEPMQLEGSFVRVYDCAG--QVAYTGLLQMFLTPRSVCVLVCNAEAFGQQRGDDTGG--QVKEDCRKLEELRVCDWLRSVSRRVPNNDVILVATKC--DLVGGNAEEFGRRIEQATRT--------------WLASWVHDGMQPVRLEPGVC------LTSCCASAVGENGEKSTGHNASERGWACDWRDDRDDMPPPGLVHRLVNKPD---GSGLRGTQMVLPR-------------SWDIALTVLEALERGRDPVEVVVEHLAEPDREDATRTAARQTGVYQGITVEALRVKWQEAVVGLARRGVNVTNAKNALEGALSIREFDGSLVRHEMFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDTRVTLEDPLDIASWGRLKNQGVLEPRLARTMWPNGLSKYVLPTLASLGLTFPLKNDPAGGLVVLLRLNPDRPERVGKVIDTFCLDQTPAFSTSWKIFLGVPAGAIEKVLTRCCSLGGVQTFWRSGVLVHGGLGDEDGHEIFAVVLEYSSSDNELTAQIFGDISTPAPWVALSYVISAVRLMLLDFPGLRSRGSLKCPQHGDAMLLVNKMTQ 816 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1035.256.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1035.256.1 >prot_S-dermatodea_contig1035.256.1 ID=prot_S-dermatodea_contig1035.256.1|Name=mRNA_S-dermatodea_contig1035.256.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=214bp MLHNLPSIDLFENRWETPAEAVVKKGLSAVSGYFTDLLAEPFRVRQSSIEback to top mRNA from alignment at S-dermatodea_contig1035:9914..19343+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig1035.256.1 ID=mRNA_S-dermatodea_contig1035.256.1|Name=mRNA_S-dermatodea_contig1035.256.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=9430bp|location=Sequence derived from alignment at S-dermatodea_contig1035:9914..19343+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig1035:9914..19343+ >mRNA_S-dermatodea_contig1035.256.1 ID=mRNA_S-dermatodea_contig1035.256.1|Name=mRNA_S-dermatodea_contig1035.256.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1284bp|location=Sequence derived from alignment at S-dermatodea_contig1035:9914..19343+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |