mRNA_S-dermatodea_contig10323.240.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig10323.240.1
Unique NamemRNA_S-dermatodea_contig10323.240.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig10323.240.1 vs. uniprot
Match: D8LHN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHN6_ECTSI)

HSP 1 Score: 356 bits (913), Expect = 6.010e-119
Identity = 204/319 (63.95%), Postives = 219/319 (68.65%), Query Frame = 1
Query:    1 LAKNPLLFNGTKFRLAGFSTEGERSSPTPAPLPPPAAADAAVDAVDGTEVVEGEEGGATAAATLATPLPPRSRSP-SSPPTKKLRLRLGLTDYRTFRGEWPLLVSVDGTNWSPSAARLTADGARDFPWLEGAYLSQKLGVGAVVETSDGFLLSLRRSSGVGEGQGMMGAPGGHPEPQKIGLTGETLSALSGKHPASRRKLGQQATDELFDSAVQEVVDETNVPRSELGEALLSGVVRQGNSFGAPTAAFIIPCFLDRAAVSALYARGAKEAFESTEMQMIPGTEIAVEGAAAWFAKRGLQTTPSFEGALELWRAHRLRG 954
            LAKNPLLFNG+KF LAGFSTEG+R     A      A  A  D                            SRSP SSPPT+KLRLRLGLTDYRTFRG          TNWSPSAARL AD ARD PWLE AYLSQKLGVGAVVET DGFLLSL RS+GV EGQGMMGAPGGHPEP+K+GLT E L +LS K  +SRRK+GQQA DELFDSAVQEVVDETNVPR  LGE LLSGVVRQGNSFGAPTAAFIIPC L R   +ALYA+GAKEAFEST ++ +PG EI                  SF+GALELWR HRL G
Sbjct:   55 LAKNPLLFNGSKFWLAGFSTEGDRKPSATATATANPAGGAVSDTTXXXXXXXXXXXXXXXXXXXXXXXXXXSRSPTSSPPTRKLRLRLGLTDYRTFRG----------TNWSPSAARLAADSARDHPWLEAAYLSQKLGVGAVVETKDGFLLSLCRSNGVAEGQGMMGAPGGHPEPEKLGLTPEVLRSLSTKAVSSRRKVGQQAADELFDSAVQEVVDETNVPREALGEPLLSGVVRQGNSFGAPTAAFIIPCSLTRGEAAALYAKGAKEAFESTGLRAVPGLEIVAXXXXXXXXXXXXXXXXSFQGALELWRGHRLMG 363          
BLAST of mRNA_S-dermatodea_contig10323.240.1 vs. uniprot
Match: A0A6H5K260_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K260_9PHAE)

HSP 1 Score: 349 bits (896), Expect = 7.610e-113
Identity = 202/324 (62.35%), Postives = 219/324 (67.59%), Query Frame = 1
Query:    1 LAKNPLLFNGTKFRLAGFSTEGERSSPTPAPLPPPAAADAAVDAVDGTEVVEGEEGGATAAATLATPLPP------RSRSPSSPPTKKLRLRLGLTDYRTFRGEWPLLVSVDGTNWSPSAARLTADGARDFPWLEGAYLSQKLGVGAVVETSDGFLLSLRRSSGVGEGQGMMGAPGGHPEPQKIGLTGETLSALSGKHPASRRKLGQQATDELFDSAVQEVVDETNVPRSELGEALLSGVVRQGNSFGAPTAAFIIPCFLDRAAVSALYARGAKEAFESTEMQMIPGTEIAVEGAAAWFAKRGLQTTPSFEGALELWRAHRLRG 954
            LAKNPLLFNG+KFRLAGFSTEG R S   A     A ADA                                    RS   SSPPT+KLRLRLGLTDYRTFRG          TNWSPSAA L AD ARD PWLE AYLSQKLGVGAVVET DGFLLSL RS+GV EGQGMMGAPGGHPEP+K+GLT E L +LS K  +SRRK+GQ+A DELFDSAVQEVVDETNVPR  LGE LLSG+VRQGNSFGAPTAAFIIPC L R   +ALYA+GAKEAFEST ++ +PG+EI                  SF+GALELWR HRL G
Sbjct:  320 LAKNPLLFNGSKFRLAGFSTEGNRKSSATAITTATATADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSPMSSSPPTRKLRLRLGLTDYRTFRG----------TNWSPSAATLAADSARDHPWLEAAYLSQKLGVGAVVETKDGFLLSLCRSNGVAEGQGMMGAPGGHPEPEKLGLTPEVLRSLSTKTVSSRRKVGQRAADELFDSAVQEVVDETNVPREALGEPLLSGLVRQGNSFGAPTAAFIIPCSLTRGEAAALYAKGAKEAFESTGLRAVPGSEIVAXXXXXXXXXXXXXXXXSFQGALELWRGHRLMG 633          
BLAST of mRNA_S-dermatodea_contig10323.240.1 vs. uniprot
Match: A0A4X2K356_VOMUR (Nudix hydrolase 22 n=6 Tax=Metatheria TaxID=9263 RepID=A0A4X2K356_VOMUR)

HSP 1 Score: 128 bits (321), Expect = 3.080e-31
Identity = 97/248 (39.11%), Postives = 123/248 (49.60%), Query Frame = 1
Query:  223 PSSPPTKKLRLRLGLTDYRTFRGEWPLLVSVDGTNWSPSAARLTADGARDFPWLEGAYLSQKLGVGAVVETSDGFLLSLRRSSGVGEGQGMMGAPGGHPEPQKIGLTGETLSALSGKHPASRRKLGQQATDELFDSAVQEVVDETNVPRSELGEALLSGVVRQGNSFGAPTAAFIIPCFLDRAAVSALYARGAKEAFEST-----EMQMIPGTEIAVEGAAAWFAKRGLQTTPSFEGALELWRAHRLR 951
            P  P    L LR+GLT Y+ F G          TNW+ SA RL   G  D+   + AYL+  LGVGA++ TSDGFL+ LRRS  V E  G++  PGGHPEPQ +   GET        P      G     ELF S +QE+ DE NVP S L   LL G+ R   S G  +A F + C L    V  LY  G  EA EST     E+Q +   +   E + AW      +  PS +GA+ L+   + R
Sbjct:   70 PPDPGGPCLTLRMGLTSYQDFLG----------TNWASSAGRLRCQGKADWGDAQ-AYLADPLGVGAMLATSDGFLVFLRRSLRVAEAPGLIDVPGGHPEPQAL-FPGET--------PRHEDLPGGLVVLELFSSILQEIRDEVNVPLSTLSRPLLLGIARNETSAGRASAEFYVSCSLTSEQVRTLYMMGGPEAHESTGIIFMEVQRVRRLQ---EESEAWS-----ELCPSAKGAILLYNLVQAR 289          
BLAST of mRNA_S-dermatodea_contig10323.240.1 vs. uniprot
Match: UPI000FFD3889 (uridine diphosphate glucose pyrophosphatase isoform X1 n=2 Tax=Vombatus ursinus TaxID=29139 RepID=UPI000FFD3889)

HSP 1 Score: 125 bits (315), Expect = 2.400e-30
Identity = 86/200 (43.00%), Postives = 103/200 (51.50%), Query Frame = 1
Query:  223 PSSPPTKKLRLRLGLTDYRTFRGEWPLLVSVDGTNWSPSAARLTADGARDFPWLEGAYLSQKLGVGAVVETSDGFLLSLRRSSGVGEGQGMMGAPGGHPEPQKIGLTGETLSALSGKHPASRRKLGQQATDELFDSAVQEVVDETNVPRSELGEALLSGVVRQGNSFGAPTAAFIIPCFLDRAAVSALYARGAKEAFEST 822
            P  P    L LR+GLT Y+ F G          TNW+ SA RL   G  D+   + AYL+  LGVGA++ TSDGFL+ LRRS  V E  G++  PGGHPEPQ +   GET        P      G     ELF S +QE+ DE NVP S L   LL G+ R   S G  +A F + C L    V  LY  G  EA EST
Sbjct:   70 PPDPGGPCLTLRMGLTSYQDFLG----------TNWASSAGRLRCQGKADWGDAQ-AYLADPLGVGAMLATSDGFLVFLRRSLRVAEAPGLIDVPGGHPEPQAL-FPGET--------PRHEDLPGGLVVLELFSSILQEIRDEVNVPLSTLSRPLLLGIARNETSAGRASAEFYVSCSLTSEQVRTLYMMGGPEAHEST 249          
BLAST of mRNA_S-dermatodea_contig10323.240.1 vs. uniprot
Match: A0A8B7RII7_HIPAR (nucleoside diphosphate-linked moiety X motif 22 isoform X1 n=3 Tax=Microchiroptera TaxID=30560 RepID=A0A8B7RII7_HIPAR)

HSP 1 Score: 125 bits (314), Expect = 7.680e-30
Identity = 89/234 (38.03%), Postives = 117/234 (50.00%), Query Frame = 1
Query:  235 PTKKLRLRLGLTDYRTFRGEWPLLVSVDGTNWSPSAARLTADGARDFPWLEGAYLSQKLGVGAVVETSDGFLLSLRRSSGVGEGQGMMGAPGGHPEPQKIGLTGETLSALSGKHPASRRKLGQQATDELFDSAVQEVVDETNVPRSELGEALLSGVVRQGNSFGAPTAAFIIPCFLDRAAVSALYARGAKEAFESTEMQMIPGTEIA-VEGAAAWFAKRGLQTTPSFEGALELW 933
            P  +L LRLGLT YR F G          TNW+ SAA L   GA D+   + AYL+  LGVGAV+ T+D FL+ LRRS  V E  G++  PGGHPEPQ +           G  P  +   G     ELF S +QE+ DE N+P   L + LL G+ R   S G  +A F + C L    V   Y  G  EA EST +  +    I+ ++    W      +  PS +GA+ L+
Sbjct:  117 PGPQLLLRLGLTSYRDFLG----------TNWASSAAWLRQQGAADWGDKQ-AYLADPLGVGAVLATTDDFLVFLRRSRQVAEAPGLVDVPGGHPEPQAL---------CPGDSPLHKDLPGDLVVHELFSSVLQEICDEVNLPLLTLSQPLLLGIARNETSAGRASAEFYVQCSLTSEQVRKYYRSGGPEAHESTGIIFMETQSISRLQETEMW-----AEFCPSAKGAIFLY 325          
BLAST of mRNA_S-dermatodea_contig10323.240.1 vs. uniprot
Match: A0A6J2UQF4_CHACN (uridine diphosphate glucose pyrophosphatase NUDT22 n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2UQF4_CHACN)

HSP 1 Score: 124 bits (311), Expect = 3.240e-29
Identity = 92/248 (37.10%), Postives = 125/248 (50.40%), Query Frame = 1
Query:  211 RSRSPSSPPTKKLRLRLGLTDYRTFRGEWPLLVSVDGTNWSPSAARLTADGARDFPWLEGAYLSQKLGVGAVVETSDGFLLSLRRSSGVGEGQGMMGAPGGHPEPQKI--GLTGETLSA--LSGKHPASRRKLGQQATDELFDSAVQEVVDETNVPRSELGEALLSGVVRQGNSFGAPTAAFIIPCFLDRAAVSALYARGAKEAFESTEMQMIPGTEIAVEGAAA--WFAKRGLQTTPSFEGALELWR 936
            R+ +P    ++ L L LGLT Y+ F G          TNWS  A  L   G  +F   + A L+Q LGVGAV+ TSDG ++ LRRS  V E +G++  PGGHPEP+ +  G+  ET++   L G+  A           E+F S   E+ DE NVP   L E +L G+     S G P+A F I C L    V   Y RG  EA EST++  +   EI   G +   W      +  PS +GA+ L+R
Sbjct:  125 RNETPGPGSSEFLHLELGLTFYKDFIG----------TNWSKGAEELRCRGRNEFGDSQ-ALLAQPLGVGAVMATSDGRVVLLRRSQRVAEARGLLDIPGGHPEPKAVCKGVNEETITVEMLLGRERA--------IVTEIFSSVCAEIRDEVNVPLEYLSEPVLMGIALNHTSAGRPSAEFFIRCSLTAEKVKDFYCRGGPEAHESTDIVFLTRNEILQLGLSTPLWS-----ELCPSAKGAVMLYR 348          
BLAST of mRNA_S-dermatodea_contig10323.240.1 vs. uniprot
Match: H9H6E0_MONDO (Nudix hydrolase domain-containing protein n=4 Tax=Didelphinae TaxID=126287 RepID=H9H6E0_MONDO)

HSP 1 Score: 122 bits (306), Expect = 4.640e-29
Identity = 87/230 (37.83%), Postives = 113/230 (49.13%), Query Frame = 1
Query:  247 LRLRLGLTDYRTFRGEWPLLVSVDGTNWSPSAARLTADGARDFPWLEGAYLSQKLGVGAVVETSDGFLLSLRRSSGVGEGQGMMGAPGGHPEPQKIGLTGETLSALSGKHPASRRKLGQQATDELFDSAVQEVVDETNVPRSELGEALLSGVVRQGNSFGAPTAAFIIPCFLDRAAVSALYARGAKEAFESTEMQMIPGTEIA--VEGAAAWFAKRGLQTTPSFEGALEL 930
            L+L +GLT YR F G          TNW+ SA RL   G  D+   + AYL+  LGVGA++ TSDG  + LRRS  V E  G++  PGGHPEPQ +           G+ P            ELF S +QE+ DE N+P S L   LL G+ R   S G  +A F + C L    V  LY  G  EA EST++  +    +    E A AW      +  PS +GA+ L
Sbjct:   78 LKLLMGLTSYRDFLG----------TNWAGSAGRLRCQGKADWGDAQ-AYLADPLGVGAMLGTSDGCFVFLRRSLKVAEAPGLIDVPGGHPEPQAL---------FPGESPRHEDLPEDLVVRELFSSILQEIRDEVNLPLSALSRPLLLGIARNETSAGRASAEFSVSCSLSSEQVRTLYRTGGLEAHESTDIIFMESRRVRRLQEEAEAW-----AELCPSAKGAILL 282          
BLAST of mRNA_S-dermatodea_contig10323.240.1 vs. uniprot
Match: A0A4W4G032_ELEEL (Nudix hydrolase 22 n=2 Tax=Electrophorus electricus TaxID=8005 RepID=A0A4W4G032_ELEEL)

HSP 1 Score: 123 bits (308), Expect = 1.460e-28
Identity = 94/250 (37.60%), Postives = 125/250 (50.00%), Query Frame = 1
Query:  214 SRSPSSPPTKKLRLRLGLTDYRTFRGEWPLLVSVDGTNWSPSAARLTADGARDFPWLEGAYLSQKLGVGAVVETSDGFLLSLRRSSGVGEGQGMMGAPGGHPEPQKI--GLTGETLSA--LSGKHPASRRKLGQQATDELFDSAVQEVVDETNVPRSELGEALLSGVVRQGNSFGAPTAAFIIPCFLDRAAVSALYARGAKEAFESTEMQMIPGTEIAV--EGAAAWFAKRGLQTTPSFEGALELWRAHR 945
            S++   PP   LRL+LGLT Y+ F G          TNWS  AA L   G  +F   +  +L+Q LGVGAV+ TSDG+++ LRRS  V E  G++  PGGHPEP+ +  G+  E +S   L G   A           E+F S   EV DE NVP   L    L G+     S G P+A F I C L    V   Y RG  EA EST++  +   E+    E A+ W      +  PS +GA+ L++  R
Sbjct:  158 SKTTPKPPDMLLRLQLGLTSYKDFLG----------TNWSREAADLQRRGEVEFGDPQ-TFLAQPLGVGAVLVTSDGYVVLLRRSRRVAEAAGLLDIPGGHPEPKAVCQGVCEEAISINLLKGCERA--------VVAEIFSSVCVEVRDEVNVPLGYLSSPALMGIALNRTSAGRPSAEFYIRCSLSMEEVKDFYWRGGPEAHESTDIVFLSRAEMLQLDENASLWS-----ELCPSAKGAVLLYQLVR 383          
BLAST of mRNA_S-dermatodea_contig10323.240.1 vs. uniprot
Match: A0A7J6AI49_AMEME (Nudix hydrolase domain-containing protein n=3 Tax=Ictaluridae TaxID=7996 RepID=A0A7J6AI49_AMEME)

HSP 1 Score: 122 bits (306), Expect = 2.320e-28
Identity = 117/351 (33.33%), Postives = 158/351 (45.01%), Query Frame = 1
Query:    1 LAKNPLLFNGTKFRL--AGFSTEGERSSPTPAPLPPPAAADAAVDAVDGTEVVEGEEG----------------GATAAATL------------ATPLPPRSRSPSSPPTKKLRLRLGLTDYRTFRGEWPLLVSVDGTNWSPSAARLTADGARDFPWLEGAYLSQKLGVGAVVETSDGFLLSLRRSSGVGEGQGMMGAPGGHPEPQKI--GLTGETLSA--LSGKHPASRRKLGQQATDELFDSAVQEVVDETNVPRSELGEALLSGVVRQGNSFGAPTAAFIIPCFLDRAAVSALYARGAKEAFESTEMQMIPGTEIAVEGAAA--WFAKRGLQTTPSFEGALELWRAHR 945
            + K P LFNG KFRL  A  ST   R+S     +P     DAA   +  T+  EG+E                 G  A+ T+                P +   PS      LRL+LGLT Y+ F G          TNWS  A  L   G  +    + A L+Q LGVGAV+ TSDG ++ LRRS  V E  G++  PGGHPEP+ +  G++ E +S   + G+  A           E+F S   EV DE NVP   L   +L G+     S G P+A F I C L    V   Y RG  EA EST++  +  +E+    A +  W      +  PS +GA+ L++  R
Sbjct:   50 VTKEPWLFNGAKFRLHSAQLSTTHPRTSINVCTMP----GDAAAQTMKSTKSAEGDEQLGNCSALNRISLHCGEGERASLTINARSKKSSCCRETVGEPQKDARPSKANVAILRLQLGLTCYKDFLG----------TNWSEEAGNLQQRGRLELGDPQ-ALLAQPLGVGAVLLTSDGKVVMLRRSQRVAEAAGLLDIPGGHPEPKAVCQGVSEEDISVDLMQGRERA--------VVAEIFSSVCAEVRDEVNVPLGFLSAPVLMGIALNHTSAGRPSAEFFIRCSLTMEDVKDFYWRGGPEAHESTDIVFLSKSEMLQLDARSPLWS-----ELCPSAKGAVLLYQLVR 372          
BLAST of mRNA_S-dermatodea_contig10323.240.1 vs. uniprot
Match: UPI001BB2B7B6 (uridine diphosphate glucose pyrophosphatase NUDT22-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB2B7B6)

HSP 1 Score: 119 bits (299), Expect = 4.770e-28
Identity = 82/233 (35.19%), Postives = 123/233 (52.79%), Query Frame = 1
Query:  259 LGLTDYRTFRGEWPLLVSVDGTNWSPSAARLTADGARDFPWLEGAYLSQKLGVGAVVETSDGFLLSLRRSSGVGEGQGMMGAPGGHPEPQKI-----GLTGETLSALSGKHPASRRKLGQQATDELFDSAVQEVVDETNVPRSELGEALLSGVVRQGNSFGAPTAAFIIPCFLDRAAVSALYARGAKEAFESTEMQMIPGTEI-AVEGAAAWFAKRGLQTTPSFEGALELWRA 939
            LGLTDYR F+           TNW+P+A  L   G++D    + AY+S  LGVG+ V T+DGF++ +RRSS VGE  G+   PGGHPEP+++      L   T+S L    PA+         DE+F S + E+ DE N+P   L E +L GV     S G P++ + + C L    V  LY  G  EA ES+ ++++   +I ++  +  W      +  PS +G + L+ +
Sbjct:   80 LGLTDYREFQV----------TNWAPNAEELLQLGSKDMGRTQ-AYMSDPLGVGSFVLTADGFVIFIRRSSRVGEAVGLWDIPGGHPEPKEVKGGSANLNDMTISDLD---PAA-------VVDEIFQSTLNEIRDEINIPLEHLSEPVLMGVALNHTSSGRPSSEYFVKCDLPSKEVKRLYQLGGAEADESSSLKLVSIKDIPSLPSSPMWS-----EMCPSGKGCVLLYNS 286          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10323.240.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHN6_ECTSI6.010e-11963.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K260_9PHAE7.610e-11362.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4X2K356_VOMUR3.080e-3139.11Nudix hydrolase 22 n=6 Tax=Metatheria TaxID=9263 R... [more]
UPI000FFD38892.400e-3043.00uridine diphosphate glucose pyrophosphatase isofor... [more]
A0A8B7RII7_HIPAR7.680e-3038.03nucleoside diphosphate-linked moiety X motif 22 is... [more]
A0A6J2UQF4_CHACN3.240e-2937.10uridine diphosphate glucose pyrophosphatase NUDT22... [more]
H9H6E0_MONDO4.640e-2937.83Nudix hydrolase domain-containing protein n=4 Tax=... [more]
A0A4W4G032_ELEEL1.460e-2837.60Nudix hydrolase 22 n=2 Tax=Electrophorus electricu... [more]
A0A7J6AI49_AMEME2.320e-2833.33Nudix hydrolase domain-containing protein n=3 Tax=... [more]
UPI001BB2B7B64.770e-2835.19uridine diphosphate glucose pyrophosphatase NUDT22... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10323contigS-dermatodea_contig10323:3418..7917 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score358.6
Seed ortholog evalue3e-96
Seed eggNOG ortholog2880.D8LHN6
Preferred nameNUDT22
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0008150,GO:0008768,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0031974,GO:0031981,GO:0042221,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046872,GO:0050896,GO:0051716,GO:0052751,GO:0060359,GO:0070013,GO:0070887,GO:0071242,GO:1901698,GO:1901699
EggNOG free text desc.GDP-mannose hydrolase activity
EggNOG OGs28JDX@1,2QRSW@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons5
Model size963
Cds size963
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10323.240.1prot_S-dermatodea_contig10323.240.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig10323 3418..7917 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924151.6523817-CDS-S-dermatodea_contig10323:3417..36411622924151.6523817-CDS-S-dermatodea_contig10323:3417..3641Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10323 3418..3641 -
1694079052.948333-CDS-S-dermatodea_contig10323:3417..36411694079052.948333-CDS-S-dermatodea_contig10323:3417..3641Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10323 3418..3641 -
1622924151.6664143-CDS-S-dermatodea_contig10323:5336..54331622924151.6664143-CDS-S-dermatodea_contig10323:5336..5433Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10323 5337..5433 -
1694079052.9630027-CDS-S-dermatodea_contig10323:5336..54331694079052.9630027-CDS-S-dermatodea_contig10323:5336..5433Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10323 5337..5433 -
1622924151.6774213-CDS-S-dermatodea_contig10323:6026..61401622924151.6774213-CDS-S-dermatodea_contig10323:6026..6140Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10323 6027..6140 -
1694079052.9731452-CDS-S-dermatodea_contig10323:6026..61401694079052.9731452-CDS-S-dermatodea_contig10323:6026..6140Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10323 6027..6140 -
1622924151.6858969-CDS-S-dermatodea_contig10323:6824..70331622924151.6858969-CDS-S-dermatodea_contig10323:6824..7033Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10323 6825..7033 -
1694079052.9834628-CDS-S-dermatodea_contig10323:6824..70331694079052.9834628-CDS-S-dermatodea_contig10323:6824..7033Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10323 6825..7033 -
1622924151.697288-CDS-S-dermatodea_contig10323:7598..79171622924151.697288-CDS-S-dermatodea_contig10323:7598..7917Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10323 7599..7917 -
1694079052.9989357-CDS-S-dermatodea_contig10323:7598..79171694079052.9989357-CDS-S-dermatodea_contig10323:7598..7917Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10323 7599..7917 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig10323.240.1

>prot_S-dermatodea_contig10323.240.1 ID=prot_S-dermatodea_contig10323.240.1|Name=mRNA_S-dermatodea_contig10323.240.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=321bp
LAKNPLLFNGTKFRLAGFSTEGERSSPTPAPLPPPAAADAAVDAVDGTEV
VEGEEGGATAAATLATPLPPRSRSPSSPPTKKLRLRLGLTDYRTFRGEWP
LLVSVDGTNWSPSAARLTADGARDFPWLEGAYLSQKLGVGAVVETSDGFL
LSLRRSSGVGEGQGMMGAPGGHPEPQKIGLTGETLSALSGKHPASRRKLG
QQATDELFDSAVQEVVDETNVPRSELGEALLSGVVRQGNSFGAPTAAFII
PCFLDRAAVSALYARGAKEAFESTEMQMIPGTEIAVEGAAAWFAKRGLQT
TPSFEGALELWRAHRLRGLA*
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mRNA from alignment at S-dermatodea_contig10323:3418..7917-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig10323.240.1 ID=mRNA_S-dermatodea_contig10323.240.1|Name=mRNA_S-dermatodea_contig10323.240.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4500bp|location=Sequence derived from alignment at S-dermatodea_contig10323:3418..7917- (Saccorhiza dermatodea SderLu1190fm monoicous)
CTCGCGAAGAACCCTCTCCTTTTCAACGGCACCAAGTTTCGCCTGGCCGG GTTTTCCACGGAGGGAGAACGCTCTTCCCCCACCCCTGCCCCCCTCCCGC CCCCCGCCGCCGCTGATGCTGCGGTCGATGCTGTCGATGGGACGGAAGTT GTGGAGGGGGAAGAGGGGGGGGCGACTGCCGCTGCAACCCTGGCAACGCC GCTGCCGCCGCGATCACGCTCGCCTTCGTCGCCCCCCACCAAGAAGCTGC GGCTGCGGCTGGGCTTGACGGACTACCGCACATTTCGAGGCGAGTGGCCT CTTCTTGTGTCCGTTGATGGTAACGGCCAGGATACGATCGGGCGAGAGGG AGGGGGGGTAGGGAGGGGGGGAGGGAGGGTGTATTGGTTGTTGCGGAGCT GTTGGCGTTTCTTTTGTTTTGTCGTAGGTCCTCGCCCGTGCTGGCTTGGT TTTGTGTCGCTATACTACTAGGCTTGGCACTGCCGACCCCACCCCCCCTC CCCTCGGAAATATAATTTAATTCAAGCATGGAGTGACCCCCCCTCCCCCA CTCCCGTTCGCACTCCCCCATCCATATAGGCCGCTTCTTTTTGCGAACAT TCGAGAATTTGTATTCAACAACAACGAGGGAAAACGCATTTTGGCTCTCG TGACCTTGGCCACACACACAAACACACATGTCTCGAGAAAAGTTTGGTGA AAATAATATTGGAGGGGGATTGGGTTCTTTCAGGTTTTACAGCCAAATAT TTCTCGTTTTGAGCAACTTGGTTGGGTTTTTTTCGGGTTGGAAACGTCAT ACACTAAAAAAACAAAATTGATTCCTCGATTCACCTCTCCGACTTTCCTC TCCTCCTCCTCCGATATCTCTCATACCCGATCAGGAACGAACTGGTCTCC CTCGGCCGCGCGGCTTACGGCAGACGGCGCGCGCGACTTCCCGTGGCTTG AGGGAGCCTACCTCTCCCAGAAGCTGGGTGTCGGCGCTGTCGTAGAGACC TCCGACGGGTTCCTGCTGTCCCTGCGCCGAAGCAGCGGCGTGGGGGAGGG GCAGGGGATGATGGGCGCGCCGGGAGGGCACCCGGAACCACAGGTCAGTG TGCTACTTCGCGAGGAGGGCGATCTTGGCGGTGTGACGGGGGACGAGGCG CTGGTTACCTCGTGTTGCTCTAGGTTATGTGTTGTTTCGGGATATGAGTT GAAAGTAAGGGTGGGCGGCTTCGTGCCACTGGACGACGTTGGGGTGGTGC CGTTGTTGTGGTTTCGCTGTGTGCGTTTCCTATAGTGGGGTTTCCGGGTT GTTGTCCGACGGGTCGGGTCGCTCGCGTAAGCAGACGCGAGAGAGGGCTG CATCGGCTCCTCGACCTTTGTCGCGATATCGGATATAGTTATGTATTTAT CTCTGTGCCTTCGGAAACGGAAACATGCTCCTCGCTTGCGTGGACGGGAC ACAAGAGCAGGCTCGTGACCACCCCGTTGAAACGATGGGGCCCGATCGAG TCCCGTCGACAGTGTTCCCGCACTGTCATATCTGGCGTCCAATCAAGCCT TGGAGGCGAAGTAAATATTTATCGTAGCGAGATCTACGTACCTTTGTGCC CGTTGCTTCCGCCCTGGCTCCGTCGCCTCCTCGCCTTCCCTCATTAATTC GCACGCTTTTTGCGTAGGCATTTCCTGCCGGCCGTGCTACGCCTTAACGT GTCGCGCGTCAAACTCGTCCACTGCGCGCGCACCTCCGACGCACGACGCC CCCCCCCCATCCCCCAACGGAAAGCAGAAAATAGGCCTGACGGGCGAAAC TTTGAGTGCCCTGTCCGGCAAGCACCCGGCGAGCCGGCGGAAGTTGGGAC AGCAGGCGACAGACGAGCTTTTCGACAGCGCGGTTCAGGAGGTGAGCATT CAAACGATAGAGTGAAGGGACGGCGGGGGGGGTGCTCACGTTTAGCGCAT GTCGTATGCAGACGGACATAGACCACGCGTCCCGACAAGACCAGGACGGA CCGATGTTTCGGATTTTCGCCGGCCAGGCTACGTTTCACAAGGATGGTAC CAGCTGCTAGCCATCATCCTTGCGTTTGAGAGGGGGGTGGGGGGGGGGGG GGGGCTTGTTTAGGGGAGTTGTGAAGGGAGTCGTTCCCTCTCCGGGGTTT TCTCATTGGTCTCCCCTCGGTGCATGCATCATGTATTATTGTGTCTAGAG GAGCAGGTGTTTATATGGTTGGGGGTGAGTGTAAAGGGTGGAGGGTTCAA AGCGCGCGTCACCTTTGCCAACACACGCGGTCCGCGAGACGGAAGTGCAG TCTGTCTCAAGCCGCATCTACATACACGCCATTTGCAACGGCTCTTTTTG TCGTCCACCTTTCAGAAAAGATGTAGGGAAAAGGTGGGCCCGCAGTTGTC CCGGTGGTAATTGATTGTTAACGTAGGGTTCTGACGGACCGGAAATTCGC ACCCGTAATCATGCCGTGTTGATTGATTACCCAGGTGGTAGATGAAACGA ACGTACCGAGATCCGAGCTTGGCGAGGCCCTACTGTCCGGCGTGGTGCGT CAGGGTAACAGCTTTGGAGCGCCGACAGCGGGTGAGCGGCAGAAGGCCAA GGTTTTAACCGTAGCGTTTTGGAGGGGGAAAGGAGAGCGAGTTCGGCACG TGGGAAGGATGTGCAACGAATCCGAACCAAGCAATATTCCGTGTAAATTG TGCCCGAAGTGGTGTGTGGGTGGGGGGGTGGAGGGGGGGGGGGGTGTCGT AGGGCTTACAAAAGCACATCAAAGATACACCACCAGGATATCGCTCAGGA CAAAGACTCTCGTACCATAACCATATAACATTACATGACATGACACCATA GCATCATACATGACAAGCGAGCCTCCTTAGGTGTAGCTTGGACCATCTTC CCTCTTGAAAAGGCCCTACTGTCCGGCGTGGTGCGCCAGGGTAACAAATT TGGAGCGCCGACTGCGGGTGAGCGGCAGAAGGCCAAGGTTTTAACCGTAG CGTTTTGGAGCAAGTGGTGTATGGGTGGGGGGGTGGACCTGATGCTCTTC GCCCCCCCCCCCCCCCCCCCCCCCCCACCTGTGGTGGTTTTTGGGTGGGG GAGCGGCGCGCGGCTCGGCGGGGGGGGTGGGCTTGNNNNNNNNNNGGTGG TGGGGGGCGAGAGGGCATAGTTTTTACCGTGGGGTGTTGGAGCAAGGGGT GGTGGGGGGGGGGGGGGGACCCTGTGCTCTTCCCCCCCCCCCCCCCCCCC GCGCTTCTATGGTGATGTTGTGGGTGGCAAGAAGTCAGCGGCTGCGCTGG GGACATGGTCTGCGTTGGTTGACACATGTCCGCGCCACTGTGGTTCTGCC CCCTCCTGATGTAAAGTCAACGGGGAAAATCCCTCATTAGAAGCGTCATC ATTCCTGAAATGACGTAATCACACCTTTTAGCCCTTTAGGGAAAGTACAT GGTATCCTGATATCCTCCATCTCATCTGTCCCTGTGTAGATTCCTACGGG ACACCCTCTCGCGCGCCTTCGGTTTTGCCGCGACGCCTTCTTCCGCTAAA TAGGATGTAGCTTTGGACGGTTTCCAGGACAGGCTCATGTTCATTTTGGG CCAGTCTCGCAGCTGCCGGCGACGACGCCGCGCCAGTTTGAGTCCTAACT CAGGTTCAGGCAGTCAAAGCAGGCTTGGCGATGACGCGAAAAGCAGGCCC TATACAGGCCTAGGGCCTACCACCTTTGCCTACAGTACACGCTGCCCCGG GACCCTCGCAGGAACCTAGCCACGCAACACGAACAAACCCGAATATGCTC CAGATGATCACCTGCAGGCCACAGCGGGCCAGTATGCTAATATTAGTGCG CTGTTGCGTAGTGAGCGTAGGGCCGCGGCTGCCACGTTCCCTCTCAACTT GGCAAGGGGGAATTCACTTGGTTTATGAGGCATGCATCGAAGGGTTCCAG GGCGAGAAAGGCCAGCGTATAGCGCACAAAATCTAAAAGGTATTCTTATC GCTGCGGTCTCGAAACAGTCGGCCTCAGGGCCCTGTGTTTTGGGGGCGGC TACAAGTACAATAGTGCCAAGAGAGGTTATATTTTAATGTGGATCGCAAA ATGTTCAGCACTGCGTGCGTCGGGAGTATCCATCAAAGTAAAAACCATCG AAAAACTTAACAACACCCCCCTCGAGGCGGCCTTTCCCGCATACCTCCCC GCACCACCATATATACCCGCGCGCACCTGCTTCATCTCGACTCGACCCTT CCCTCCCCTCCTCCCTCCTCCCCCAGCCTTCATCATACCCTGCTTCTTAG ACCGAGCGGCGGTGTCGGCGCTGTACGCCCGTGGTGCCAAGGAGGCGTTC GAGAGCACCGAGATGCAGATGATCCCGGGAACGGAGATAGCGGTGGAGGG AGCCGCTGCCTGGTTTGCGAAGCGCGGGCTGCAGACCACCCCGTCTTTCG AGGGCGCGCTGGAGCTGTGGAGGGCGCACCGGCTGCGGGGGCTTGCGTGA
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Coding sequence (CDS) from alignment at S-dermatodea_contig10323:3418..7917-

>mRNA_S-dermatodea_contig10323.240.1 ID=mRNA_S-dermatodea_contig10323.240.1|Name=mRNA_S-dermatodea_contig10323.240.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1926bp|location=Sequence derived from alignment at S-dermatodea_contig10323:3418..7917- (Saccorhiza dermatodea SderLu1190fm monoicous)
CTCGCGAAGAACCCTCTCCTTTTCAACGGCACCAAGTTTCGCCTGGCCGG
GTTTTCCACGGAGGGAGAACGCTCTTCCCCCACCCCTGCCCCCCTCCCGC
CCCCCGCCGCCGCTGATGCTGCGGTCGATGCTGTCGATGGGACGGAAGTT
GTGGAGGGGGAAGAGGGGGGGGCGACTGCCGCTGCAACCCTGGCAACGCC
GCTGCCGCCGCGATCACGCTCGCCTTCGTCGCCCCCCACCAAGAAGCTGC
GGCTGCGGCTGGGCTTGACGGACTACCGCACATTTCGAGGCGAGTGGCCT
CTTCTTGTGTCCGTTGATGCTCGCGAAGAACCCTCTCCTTTTCAACGGCA
CCAAGTTTCGCCTGGCCGGGTTTTCCACGGAGGGAGAACGCTCTTCCCCC
ACCCCTGCCCCCCTCCCGCCCCCCGCCGCCGCTGATGCTGCGGTCGATGC
TGTCGATGGGACGGAAGTTGTGGAGGGGGAAGAGGGGGGGGCGACTGCCG
CTGCAACCCTGGCAACGCCGCTGCCGCCGCGATCACGCTCGCCTTCGTCG
CCCCCCACCAAGAAGCTGCGGCTGCGGCTGGGCTTGACGGACTACCGCAC
ATTTCGAGGCGAGTGGCCTCTTCTTGTGTCCGTTGATGGAACGAACTGGT
CTCCCTCGGCCGCGCGGCTTACGGCAGACGGCGCGCGCGACTTCCCGTGG
CTTGAGGGAGCCTACCTCTCCCAGAAGCTGGGTGTCGGCGCTGTCGTAGA
GACCTCCGACGGGTTCCTGCTGTCCCTGCGCCGAAGCAGCGGCGTGGGGG
AGGGGCAGGGGATGATGGGCGCGCCGGGAGGGCACCCGGAACCACAGGAA
CGAACTGGTCTCCCTCGGCCGCGCGGCTTACGGCAGACGGCGCGCGCGAC
TTCCCGTGGCTTGAGGGAGCCTACCTCTCCCAGAAGCTGGGTGTCGGCGC
TGTCGTAGAGACCTCCGACGGGTTCCTGCTGTCCCTGCGCCGAAGCAGCG
GCGTGGGGGAGGGGCAGGGGATGATGGGCGCGCCGGGAGGGCACCCGGAA
CCACAGAAAATAGGCCTGACGGGCGAAACTTTGAGTGCCCTGTCCGGCAA
GCACCCGGCGAGCCGGCGGAAGTTGGGACAGCAGGCGACAGACGAGCTTT
TCGACAGCGCGGTTCAGGAGAAAATAGGCCTGACGGGCGAAACTTTGAGT
GCCCTGTCCGGCAAGCACCCGGCGAGCCGGCGGAAGTTGGGACAGCAGGC
GACAGACGAGCTTTTCGACAGCGCGGTTCAGGAGGTGGTAGATGAAACGA
ACGTACCGAGATCCGAGCTTGGCGAGGCCCTACTGTCCGGCGTGGTGCGT
CAGGGTAACAGCTTTGGAGCGCCGACAGCGGGTGGTAGATGAAACGAACG
TACCGAGATCCGAGCTTGGCGAGGCCCTACTGTCCGGCGTGGTGCGTCAG
GGTAACAGCTTTGGAGCGCCGACAGCGGCCTTCATCATACCCTGCTTCTT
AGACCGAGCGGCGGTGTCGGCGCTGTACGCCCGTGGTGCCAAGGAGGCGT
TCGAGAGCACCGAGATGCAGATGATCCCGGGAACGGAGATAGCGGTGGAG
GGAGCCGCTGCCTGGTTTGCGAAGCGCGGGCTGCAGACCACCCCGTCTTT
CGAGGGCGCGCTGGAGCTGTGGAGGGCGCACCGGCTGCGGGGGCTTGCGT
GACCTTCATCATACCCTGCTTCTTAGACCGAGCGGCGGTGTCGGCGCTGT
ACGCCCGTGGTGCCAAGGAGGCGTTCGAGAGCACCGAGATGCAGATGATC
CCGGGAACGGAGATAGCGGTGGAGGGAGCCGCTGCCTGGTTTGCGAAGCG
CGGGCTGCAGACCACCCCGTCTTTCGAGGGCGCGCTGGAGCTGTGGAGGG
CGCACCGGCTGCGGGGGCTTGCGTGA
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