mRNA_S-dermatodea_contig10269.196.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10269.196.1 vs. uniprot
Match: D8LK57_ECTSI (PWI domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK57_ECTSI) HSP 1 Score: 132 bits (332), Expect = 3.290e-36 Identity = 66/78 (84.62%), Postives = 71/78 (91.03%), Query Frame = 1
Query: 31 RALYTEQDSRWGDAEKKLLRRTKFSKVLEQKVNMKKVNMEVMQRWIAQRITSLLGFEDDIVVGTCVNYLSEKVRITAK 264
R EQDSRWGDAEKKLLRRTKFSKVLEQKVNMKKVNM+VMQRWIAQRITSLLGFEDDIVVGTC+NYLSE+ ++ K
Sbjct: 7 RGTTAEQDSRWGDAEKKLLRRTKFSKVLEQKVNMKKVNMDVMQRWIAQRITSLLGFEDDIVVGTCINYLSEEGKLDPK 84
BLAST of mRNA_S-dermatodea_contig10269.196.1 vs. uniprot
Match: A0A6H5KM37_9PHAE (PWI domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM37_9PHAE) HSP 1 Score: 132 bits (333), Expect = 5.960e-36 Identity = 67/78 (85.90%), Postives = 71/78 (91.03%), Query Frame = 1
Query: 31 RALYTEQDSRWGDAEKKLLRRTKFSKVLEQKVNMKKVNMEVMQRWIAQRITSLLGFEDDIVVGTCVNYLSEKVRITAK 264
R EQDSRWGDAEKKLLRRTKFSKVLEQKVNMKKVNM+VMQRWIAQRITSLLGFEDDIVVGTCVNYLSE+ ++ K
Sbjct: 7 RGTTAEQDSRWGDAEKKLLRRTKFSKVLEQKVNMKKVNMDVMQRWIAQRITSLLGFEDDIVVGTCVNYLSEEGKLDPK 84
BLAST of mRNA_S-dermatodea_contig10269.196.1 vs. uniprot
Match: A0A3B5LXS2_9TELE (Serine/arginine repetitive matrix 1 n=2 Tax=Poeciliinae TaxID=586240 RepID=A0A3B5LXS2_9TELE) HSP 1 Score: 80.9 bits (198), Expect = 5.330e-18 Identity = 38/79 (48.10%), Postives = 57/79 (72.15%), Query Frame = 1
Query: 31 RALYTEQDSRWGDAEKKLLRRTKFSKVLEQKVNMKKVNMEVMQRWIAQRITSLLGFEDDIVVGTCVNYLSEKVRITAKY 267
R EQD+R+ + +KKLL++ KF++ L++KV+M KVN+EV++ WI QR+T +LGFEDD+V+ N L EKV + Y
Sbjct: 7 RGTSAEQDNRFSNKQKKLLKQLKFAECLDKKVDMTKVNLEVIKPWITQRVTEILGFEDDVVIEFIFNQLEEKVNYISSY 85
BLAST of mRNA_S-dermatodea_contig10269.196.1 vs. uniprot
Match: A0A3Q3W3H8_MOLML (PWI domain-containing protein n=1 Tax=Mola mola TaxID=94237 RepID=A0A3Q3W3H8_MOLML) HSP 1 Score: 80.1 bits (196), Expect = 1.070e-17 Identity = 39/78 (50.00%), Postives = 57/78 (73.08%), Query Frame = 1
Query: 31 RALYTEQDSRWGDAEKKLLRRTKFSKVLEQKVNMKKVNMEVMQRWIAQRITSLLGFEDDIVVGTCVNYLSEKVRITAK 264
R EQD+R+ + +KKLL++ KF++ L++KV+M KVN+EV++ WI QR+T +LGFEDD+V+ N L EKV I K
Sbjct: 7 RGTSAEQDNRFSNKQKKLLKQLKFAECLDKKVDMTKVNLEVIKPWITQRVTEILGFEDDVVIEFIFNQLEEKVIILMK 84
BLAST of mRNA_S-dermatodea_contig10269.196.1 vs. uniprot
Match: A0A8C6X934_NAJNA (PWI domain-containing protein n=1 Tax=Naja naja TaxID=35670 RepID=A0A8C6X934_NAJNA) HSP 1 Score: 79.7 bits (195), Expect = 1.400e-17 Identity = 38/78 (48.72%), Postives = 57/78 (73.08%), Query Frame = 1
Query: 22 PLGRALYTEQDSRWGDAEKKLLRRTKFSKVLEQKVNMKKVNMEVMQRWIAQRITSLLGFEDDIVVGTCVNYLSEKVRI 255
P G+ EQD+R+ + +KKLL++ KF++ LE+KV+M KVN+EV++ WI +R+T +LGFEDD+V+ N L KV I
Sbjct: 8 PAGKGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKVII 85
BLAST of mRNA_S-dermatodea_contig10269.196.1 vs. uniprot
Match: A0A444UU49_ACIRT (Serine/arginine repetitive matrix protein 1 n=1 Tax=Acipenser ruthenus TaxID=7906 RepID=A0A444UU49_ACIRT) HSP 1 Score: 79.3 bits (194), Expect = 1.990e-17 Identity = 38/73 (52.05%), Postives = 55/73 (75.34%), Query Frame = 1
Query: 31 RALYTEQDSRWGDAEKKLLRRTKFSKVLEQKVNMKKVNMEVMQRWIAQRITSLLGFEDDIVVGTCVNYLSEKV 249
R EQD+R+ + +KKLL++ KF++ LE+KV+M KVN+EV++ WI QR+T +LGFEDD+V+ N L EKV
Sbjct: 7 RGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMTKVNLEVIKPWITQRVTEILGFEDDVVIEFIFNQLEEKV 79
BLAST of mRNA_S-dermatodea_contig10269.196.1 vs. uniprot
Match: A0A444URY3_ACIRT (Serine/arginine repetitive matrix protein 1 (Fragment) n=1 Tax=Acipenser ruthenus TaxID=7906 RepID=A0A444URY3_ACIRT) HSP 1 Score: 79.0 bits (193), Expect = 2.750e-17 Identity = 37/68 (54.41%), Postives = 54/68 (79.41%), Query Frame = 1
Query: 46 EQDSRWGDAEKKLLRRTKFSKVLEQKVNMKKVNMEVMQRWIAQRITSLLGFEDDIVVGTCVNYLSEKV 249
EQD+R+ + +KKLL++ KF++ LE+KV+M KVN+EV++ WI QR+T +LGFEDD+V+ N L EKV
Sbjct: 5 EQDNRFSNKQKKLLKQLKFAECLEKKVDMTKVNLEVIKPWITQRVTEILGFEDDVVIEFIFNQLEEKV 72
BLAST of mRNA_S-dermatodea_contig10269.196.1 vs. uniprot
Match: C1BFA5_ONCMY (Serine/arginine repetitive matrix protein 1 n=1 Tax=Oncorhynchus mykiss TaxID=8022 RepID=C1BFA5_ONCMY) HSP 1 Score: 79.0 bits (193), Expect = 3.490e-17 Identity = 38/73 (52.05%), Postives = 55/73 (75.34%), Query Frame = 1
Query: 31 RALYTEQDSRWGDAEKKLLRRTKFSKVLEQKVNMKKVNMEVMQRWIAQRITSLLGFEDDIVVGTCVNYLSEKV 249
R EQD+R+ + +KKLL++ KF++ LE+KV+M KVN+EV++ WI QR+T +LGFEDD+V+ N L EKV
Sbjct: 7 RGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMTKVNLEVIKPWITQRVTEILGFEDDLVIEFIFNQLEEKV 79
BLAST of mRNA_S-dermatodea_contig10269.196.1 vs. uniprot
Match: A0A8C1AHX8_CYPCA (PWI domain-containing protein n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1AHX8_CYPCA) HSP 1 Score: 78.6 bits (192), Expect = 3.900e-17 Identity = 38/73 (52.05%), Postives = 54/73 (73.97%), Query Frame = 1
Query: 31 RALYTEQDSRWGDAEKKLLRRTKFSKVLEQKVNMKKVNMEVMQRWIAQRITSLLGFEDDIVVGTCVNYLSEKV 249
R EQD+R+ + KKLL++ KF++ LE+KV+M KVN+EV++ WI QR+T +LGFEDD+V+ N L EKV
Sbjct: 7 RGTSAEQDNRFSNKHKKLLKQLKFAECLEKKVDMTKVNLEVVKPWITQRVTEILGFEDDVVIEFVFNQLEEKV 79
BLAST of mRNA_S-dermatodea_contig10269.196.1 vs. uniprot
Match: A0A8C4SX00_ERPCA (Serine and arginine repetitive matrix 1 n=1 Tax=Erpetoichthys calabaricus TaxID=27687 RepID=A0A8C4SX00_ERPCA) HSP 1 Score: 79.3 bits (194), Expect = 4.240e-17 Identity = 37/74 (50.00%), Postives = 55/74 (74.32%), Query Frame = 1
Query: 31 RALYTEQDSRWGDAEKKLLRRTKFSKVLEQKVNMKKVNMEVMQRWIAQRITSLLGFEDDIVVGTCVNYLSEKVR 252
R EQD+R+ + +KKLL++ KF++ LE+KV+M KVN+EV++ WI QR+T +LGFEDD+V+ N L EK+
Sbjct: 7 RGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMTKVNLEVIKPWITQRVTEILGFEDDVVIEFIFNQLEEKIN 80 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10269.196.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10269.196.1 >prot_S-dermatodea_contig10269.196.1 ID=prot_S-dermatodea_contig10269.196.1|Name=mRNA_S-dermatodea_contig10269.196.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=89bp MIKTKNCPLGRALYTEQDSRWGDAEKKLLRRTKFSKVLEQKVNMKKVNMEback to top mRNA from alignment at S-dermatodea_contig10269:5194..5691+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10269.196.1 ID=mRNA_S-dermatodea_contig10269.196.1|Name=mRNA_S-dermatodea_contig10269.196.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=498bp|location=Sequence derived from alignment at S-dermatodea_contig10269:5194..5691+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10269:5194..5691+ >mRNA_S-dermatodea_contig10269.196.1 ID=mRNA_S-dermatodea_contig10269.196.1|Name=mRNA_S-dermatodea_contig10269.196.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=534bp|location=Sequence derived from alignment at S-dermatodea_contig10269:5194..5691+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |