mRNA_S-dermatodea_contig1026.190.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig1026.190.1 vs. uniprot
Match: D8LCZ7_ECTSI (ARLX, novel ARF-like Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCZ7_ECTSI) HSP 1 Score: 209 bits (531), Expect = 1.040e-65 Identity = 101/169 (59.76%), Postives = 125/169 (73.96%), Query Frame = 1
Query: 1 IRQGRPGSGKSSALFHLKKGETLITPNPGGKGFFVESLAHAGSKLNVWEIH--SDTVRYRCLATAKALCFVLDSLDDPAGKQKAKVTLHATMSALASQRPRMCFTVLIFANKQDLAGALAPAKLERELEIRSRPDSATWRWAVQGCSATRGTGLNEGMDWVAASIRSKN 501
I +GR GSGKSSALFHLK GETL+TP PG +GF+VE HAG++LNVWE+ S VR + L A+AL +V+DS AG Q AK L+ ++ALASQ+PR CFTVL+ ANKQD+ A +PA +ER+L I SRPD +TWRWAVQ CSA G GL EGMDW+A ++R KN
Sbjct: 12 ILEGRSGSGKSSALFHLKHGETLLTPTPGIEGFYVERAVHAGTRLNVWEVQPSSTIVREKSLTVARALVYVIDSTGGSAGIQDAKEDLYPILTALASQKPRTCFTVLVLANKQDIPAAASPATIERDLAISSRPDGSTWRWAVQSCSAKEGLGLKEGMDWLAKAVRGKN 180
BLAST of mRNA_S-dermatodea_contig1026.190.1 vs. uniprot
Match: A0A0J9X2K4_GEOCN (Similar to Saccharomyces cerevisiae YBR164C ARL1 Soluble GTPase with a role in regulation of membrane traffic n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X2K4_GEOCN) HSP 1 Score: 93.2 bits (230), Expect = 9.670e-21 Identity = 59/168 (35.12%), Postives = 93/168 (55.36%), Query Frame = 1
Query: 10 GRPGSGKSSALFHLKKGETLITPNPGGKGFFVESLAHAGSKLNVWEIHSDT-VR--YRCL-ATAKALCFVLDSLDDPAGKQKAKVTLHATMSALASQRPRMCFTVLIFANKQDLAGALAPAKLERELEIRSRPDSATWRWAVQGCSATRGTGLNEGMDWVAASIRSKN 501
G G+GK++ L+ L+ GE + T GF VE+L + K NVW++ T +R +RC A A+A+ FV+DS D T A + + + +L+FANKQD GAL +++ ++L + D + W++ CSA RG GLNEG+DW+A I+ ++
Sbjct: 25 GLDGAGKTTLLYRLQLGEVVSTVPT--VGFNVETLTYKNLKFNVWDLGGQTSIRPYWRCYYANAEAVIFVVDSTD-----VDRLSTSAAELHTMLKEDELKDAALLVFANKQDQPGALTASEVSKQLNLVDMKDRS---WSIMACSAIRGDGLNEGLDWLADVIKEEH 182
BLAST of mRNA_S-dermatodea_contig1026.190.1 vs. uniprot
Match: Q6BZT6_YARLI (YALI0F31009p n=4 Tax=Yarrowia TaxID=4951 RepID=Q6BZT6_YARLI) HSP 1 Score: 89.7 bits (221), Expect = 2.110e-19 Identity = 61/168 (36.31%), Postives = 93/168 (55.36%), Query Frame = 1
Query: 10 GRPGSGKSSALFHLKKGETLITPNPGGKGFFVESLAHAGSKLNVWEIHSDT-VR--YRCL-ATAKALCFVLDSLDDPAGKQK---AKVTLHATMSALASQRPRMCFTVLIFANKQDLAGALAPAKLERELEIRSRPDSATWRWAVQGCSATRGTGLNEGMDWVAASIR 492
G G+GK++ L+ L+ GE + T GF VE+L + KLNVW++ T +R +RC A A+ FV+DS D KQ+ K LH+ + Q +L+FANKQD GA+ A++ L++ S D + W++ CSA +G GL+EG+DW+ I+
Sbjct: 25 GLDGAGKTTILYRLQLGEVVDTVPT--IGFNVETLTYKNLKLNVWDLGGQTSIRPYWRCYYANTAAIIFVVDSTD----KQRIDMCKEELHSMLEEDELQNA----VLLVFANKQDQEGAMTAAEVSTALDLVSLKDRS---WSIMPCSALKGEGLSEGLDWLTGVIK 179
BLAST of mRNA_S-dermatodea_contig1026.190.1 vs. uniprot
Match: A0A060TE46_BLAAD (ARAD1D12738p n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060TE46_BLAAD) HSP 1 Score: 89.0 bits (219), Expect = 3.550e-19 Identity = 59/168 (35.12%), Postives = 93/168 (55.36%), Query Frame = 1
Query: 10 GRPGSGKSSALFHLKKGETLITPNPGGKGFFVESLAHAGSKLNVWEIHSDT-VR--YRCL-ATAKALCFVLDSLDDPAGKQKAKVTLHATMSALASQRPRMCFTVLIFANKQDLAGALAPAKLERELEIRSRPDSATWRWAVQGCSATRGTGLNEGMDWVAASIRSKN 501
G G+GK++ L+ L+ GE + T GF VE+L + K NVW++ T +R +RC A A+ FV+DS D A+ LH + + +L+FANKQD AGAL+ +++ + L++ S D + W++ CSA RG GLN+G+DW+ I ++
Sbjct: 18 GLDGAGKTTILYKLQIGEVVSTVPT--IGFNVETLHYKNLKFNVWDLGGQTSIRPYWRCYYANTAAVIFVVDSTDKDRLSTSAQ-ELHTMLK----EEELADSALLVFANKQDQAGALSASEVSKALDLVSLKDRS---WSIMACSAIRGDGLNDGLDWLVNVINEEH 175
BLAST of mRNA_S-dermatodea_contig1026.190.1 vs. uniprot
Match: A0A0H5C9A6_CYBJN (ADP-ribosylation factor 1 n=4 Tax=Saccharomycetales TaxID=4892 RepID=A0A0H5C9A6_CYBJN) HSP 1 Score: 87.8 bits (216), Expect = 1.160e-18 Identity = 60/169 (35.50%), Postives = 92/169 (54.44%), Query Frame = 1
Query: 10 GRPGSGKSSALFHLKKGETLITPNPGGKGFFVESLAHAGSKLNVWEIHSDT-VR--YRCL-ATAKALCFVLDSLD----DPAGKQKAKVTLHATMSALASQRPRMCFTVLIFANKQDLAGALAPAKLERELEIRSRPDSATWRWAVQGCSATRGTGLNEGMDWVAASIR 492
G G+GK++ L+ L+ GE + T GF VE+L++ KLNVW++ T +R +RC A A+ FV+DS D D A K+ + +S A +L+FANKQD+AGAL A++ + L + D + W++ SA +G GL EG+DW+ I+
Sbjct: 25 GLDGAGKTTILYRLQIGEVINTKPT--IGFNVETLSYKNLKLNVWDLGGQTSIRPYWRCYYANTAAVIFVVDSTDKDRIDTASKELHTMLAEEELSDAA---------LLVFANKQDVAGALTAAEVSKALNLSDLKDRS---WSIVASSAIKGEGLTEGLDWLIDVIK 179
BLAST of mRNA_S-dermatodea_contig1026.190.1 vs. uniprot
Match: A0A6B2LKQ0_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LKQ0_9EUKA) HSP 1 Score: 87.8 bits (216), Expect = 1.370e-18 Identity = 68/174 (39.08%), Postives = 86/174 (49.43%), Query Frame = 1
Query: 10 GRPGSGKSSALFHLKKGETL-ITPNPGGKGFFVESLAHAGSKLNVWEIHSDTVRYRCL-----ATAKALCFVLDSLDDPAGKQKAKVTLHATMSALASQRPRMCFTVLIFANKQDLAGALAPAKLERELEIRSRPDSATWR------------WAVQGCSATRGTGLNEGMDWV 477
G G+GKS+ L+ LK GE +TP GF VES+ + K VW+I + R R L AK L FVLDS D P + AK +S L S+ VLIFANKQDL GA+ P ++ EL +RS T W +Q C AT G GL EG +W+
Sbjct: 25 GLDGAGKSTILYKLKLGEVRHLTPTI---GFNVESINYKNIKFTVWDI-AGQARIRKLWHHYYENAKGLIFVLDSNDVPRISEAAK-----ELSILMSEPELSEIPVLIFANKQDLPGAMTPYQMACELGLRSSVTHDTVSIPTTKNYIEGRYWCIQPCVATTGEGLWEGFEWL 189
BLAST of mRNA_S-dermatodea_contig1026.190.1 vs. uniprot
Match: A0A0G4J146_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J146_PLABS) HSP 1 Score: 87.0 bits (214), Expect = 2.200e-18 Identity = 50/160 (31.25%), Postives = 83/160 (51.88%), Query Frame = 1
Query: 10 GRPGSGKSSALFHLKKGETLITPNPGGKGFFVESLAHAGSKLNVWEIHSDTVRYRCLATAKALCFVLDSLDDPAGKQKAKVTLHATMSALASQRPRMCFTVLIFANKQDLAGALAPAKLERELEIRSRPDSATWRWAVQGCSATRGTGLNEGMDWVAASI 489
G +GK++ LF L GE ++T G VE + H G L+VW++ + + +T C + + D + +++ V A+A++ +L++ANKQDLAG + P ++ +L++ S T RW +QGC A G GL EG+DWV +
Sbjct: 24 GLDNAGKTTILFKLSLGEVVVTHPTIGSN--VEEVRHGGVHLHVWDLGGQELPRQTWSTYFVNCAAIIMVVDSSDRKRIGVVKDELQKAMATEHLASS-RLLVYANKQDLAGCMKPGEIADQLDLTSYK---TQRWHIQGCCALTGDGLVEGLDWVTKEL 177
BLAST of mRNA_S-dermatodea_contig1026.190.1 vs. uniprot
Match: A0A7G2CMA0_9TRYP (Uncharacterized protein n=1 Tax=Angomonas deanei TaxID=59799 RepID=A0A7G2CMA0_9TRYP) HSP 1 Score: 86.3 bits (212), Expect = 4.460e-18 Identity = 59/172 (34.30%), Postives = 90/172 (52.33%), Query Frame = 1
Query: 1 IRQGRPGSGKSSALFHLKKGETLITPNPGGKGFFVESLAHAGSKLNVWEIHSDTVRYRCL-----ATAKALCFVLDSLD-DPAGKQKAKVTLHATMSALASQRPRMCFTVLIFANKQDLAGALAPAKLERELEI---RSRPDSATWRWAVQGCSATRGTGLNEGMDWVAASI 489
I G +GK++ L+ LK GE + T GF +E++ + K +W++ R R L + FV+DS D D G+ K++ M L ++L+FANKQD+ GAL+ A++ +LE+ RSR +W +QGC AT GL EG+DW+AA+I
Sbjct: 21 IMVGLDAAGKTTILYKLKLGEVVTTVPT--IGFNIETVEYKNLKFTIWDVGGQQ-RLRSLWHYYYQNTNGIIFVIDSADHDRIGEAKSE------MEKLLEDEELKSASLLVFANKQDIPGALSTAQVTEKLELTRFRSR------QWYIQGCCATTAQGLYEGLDWLAANI 177
BLAST of mRNA_S-dermatodea_contig1026.190.1 vs. uniprot
Match: A0A0C2XES1_9AGAM (Uncharacterized protein n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C2XES1_9AGAM) HSP 1 Score: 86.3 bits (212), Expect = 4.990e-18 Identity = 57/165 (34.55%), Postives = 91/165 (55.15%), Query Frame = 1
Query: 10 GRPGSGKSSALFHLKKGETLIT-PNPGGKGFFVESLAHAGSKLNVWEIHSDT-VR--YRC-LATAKALCFVLDSLDDPAGKQKAKVTLHATMSALASQRPRMCFTVLIFANKQDLAGALAPAKLERELEIRSRPDSATWRWAVQGCSATRGTGLNEGMDWVAASI 489
G SGKS+ L+ L GE + T P GF VE++ + KL +W++ + +R +RC A+ +V+DS D K + K +S L R +L+FANKQD+ GAL A++ EL + ++ W +V+GCSA +G GL++G+DW+ +S+
Sbjct: 30 GLDASGKSTILYQLHLGEVVATIPTI---GFNVETVVYKNIKLILWDLGGQSSIRSYWRCYFQNTSAIIYVIDSSD----KDRLKTAKSELLSVLDEDELRGV-PLLVFANKQDIPGALPAAEISEELGLAGAENARPW--SVRGCSAIKGEGLHDGLDWLVSSL 184
BLAST of mRNA_S-dermatodea_contig1026.190.1 vs. uniprot
Match: E4X7L4_OIKDI (Uncharacterized protein n=2 Tax=Oikopleura dioica TaxID=34765 RepID=E4X7L4_OIKDI) HSP 1 Score: 85.9 bits (211), Expect = 6.140e-18 Identity = 52/168 (30.95%), Postives = 100/168 (59.52%), Query Frame = 1
Query: 10 GRPGSGKSSALFHLKKGETLIT-PNPGGKGFFVESLAHAGSKLNVWEIHSDT-VR--YRCL-ATAKALCFVLDSLDDPAGKQKAKVTLHATMSALASQRPRMCFTVLIFANKQDLAGALAPAKLERELEIRSRPDSATWRWAVQGCSATRGTGLNEGMDWVAASIRSK 498
G G+GK++ L+ L+ GE + T P GF VE++++ K VW++ T +R +RC + A+ +V+DS+D K++ ++ + +S L + + +L+FANKQD+ GA++P ++ +EL + + + +W + SA +GTGL+E M+W+ +++S+
Sbjct: 24 GLDGAGKTTILYRLQVGEVVTTIPTI---GFNVETVSYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAIIYVVDSVD----KERIGISKNEMVSMLEEEELKKAM-LLVFANKQDMEGAMSPTEVAKELGLAALRER---KWQIFKTSAVKGTGLDEAMEWLVEALKSR 180 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1026.190.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1026.190.1 >prot_S-dermatodea_contig1026.190.1 ID=prot_S-dermatodea_contig1026.190.1|Name=mRNA_S-dermatodea_contig1026.190.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=167bp IRQGRPGSGKSSALFHLKKGETLITPNPGGKGFFVESLAHAGSKLNVWEIback to top mRNA from alignment at S-dermatodea_contig1026:46..1424+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig1026.190.1 ID=mRNA_S-dermatodea_contig1026.190.1|Name=mRNA_S-dermatodea_contig1026.190.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1379bp|location=Sequence derived from alignment at S-dermatodea_contig1026:46..1424+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig1026:46..1424+ >mRNA_S-dermatodea_contig1026.190.1 ID=mRNA_S-dermatodea_contig1026.190.1|Name=mRNA_S-dermatodea_contig1026.190.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1002bp|location=Sequence derived from alignment at S-dermatodea_contig1026:46..1424+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |