mRNA_S-dermatodea_contig10250.185.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10250.185.1 vs. uniprot
Match: D8LFI2_ECTSI (MFS domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI2_ECTSI) HSP 1 Score: 125 bits (315), Expect = 6.880e-32 Identity = 63/93 (67.74%), Postives = 74/93 (79.57%), Query Frame = 2
Query: 8 LGVVSDVYGRLIGFKIATILVVLFGLLTVAAPGFWWLLLFRSLVGVGAGGMEVPFDLLSEIVPRKDRAEVLLGVQATWAVGSLFVGVVAWAVL 286
LGV SDVYGR F +AT+LVVLFGL T A FWWLLLFRSLVGVGAGGMEVPFDLL E++ ++++ +L+ VQ WA+GSLFVG AWAVL
Sbjct: 87 LGVFSDVYGRRPAFLVATLLVVLFGLSTTFATSFWWLLLFRSLVGVGAGGMEVPFDLLGELITHREKSRILVDVQVMWAMGSLFVGFAAWAVL 179
BLAST of mRNA_S-dermatodea_contig10250.185.1 vs. uniprot
Match: A0A6H5JGP7_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGP7_9PHAE) HSP 1 Score: 122 bits (305), Expect = 3.000e-30 Identity = 61/93 (65.59%), Postives = 73/93 (78.49%), Query Frame = 2
Query: 8 LGVVSDVYGRLIGFKIATILVVLFGLLTVAAPGFWWLLLFRSLVGVGAGGMEVPFDLLSEIVPRKDRAEVLLGVQATWAVGSLFVGVVAWAVL 286
LGV SD+YGR F +AT+LVVLFGL T A FWWLLLFRSLVGVGAGGM VPFDLL E++ ++++ +L+ VQ WA+GSLFVG AWAVL
Sbjct: 294 LGVFSDLYGRRPAFLVATLLVVLFGLSTTFATSFWWLLLFRSLVGVGAGGMGVPFDLLGELITHREKSRILVDVQVMWAMGSLFVGFAAWAVL 386
BLAST of mRNA_S-dermatodea_contig10250.185.1 vs. uniprot
Match: A0A6G0WD31_9STRA (MFS domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WD31_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 2.020e-17 Identity = 42/95 (44.21%), Postives = 58/95 (61.05%), Query Frame = 2
Query: 2 MFLGVVSDVYGRLIGFKIATILVVLFGLLTVAAPGFWWLLLFRSLVGVGAGGMEVPFDLLSEIVPRKDRAEVLLGVQATWAVGSLFVGVVAWAVL 286
+F G +D YGR +GF ++ + +FG+ + P WWL+ R+LVG G G VPFDLL+E +P K+R VLL Q W VG FV +AW V+
Sbjct: 108 LFWGFFADKYGRRLGFLLSAFCIAVFGIASAFVPNVWWLMFCRALVGFGVSGALVPFDLLAEFLPDKERGRVLLIFQLYWTVGIAFVAGLAWIVV 202
BLAST of mRNA_S-dermatodea_contig10250.185.1 vs. uniprot
Match: A0A1V9Z8D7_9STRA (Transporter n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z8D7_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 3.010e-15 Identity = 39/95 (41.05%), Postives = 60/95 (63.16%), Query Frame = 2
Query: 2 MFLGVVSDVYGRLIGFKIATILVVLFGLLTVAAPGFWWLLLFRSLVGVGAGGMEVPFDLLSEIVPRKDRAEVLLGVQATWAVGSLFVGVVAWAVL 286
+F G D YGR +GF + + + +FG+L+ A ++L++ R+LVG G G VPFDL++E +P K+R VL+ Q W VG FV ++AW V+
Sbjct: 105 LFWGFFGDKYGRRMGFLWSALCIAIFGVLSAFATNVYYLMVCRALVGFGVAGSLVPFDLMAEFLPDKERGRVLMYFQLFWTVGIAFVAILAWVVI 199
BLAST of mRNA_S-dermatodea_contig10250.185.1 vs. uniprot
Match: T0Q6G6_SAPDV (MFS domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0Q6G6_SAPDV) HSP 1 Score: 78.2 bits (191), Expect = 7.720e-15 Identity = 40/95 (42.11%), Postives = 60/95 (63.16%), Query Frame = 2
Query: 2 MFLGVVSDVYGRLIGFKIATILVVLFGLLTVAAPGFWWLLLFRSLVGVGAGGMEVPFDLLSEIVPRKDRAEVLLGVQATWAVGSLFVGVVAWAVL 286
+F G D YGR +GF + + + +FG+L+ A ++L+ R++VG G G VPFDL++E +P K+R +LL Q W VG FV V+AW+VL
Sbjct: 103 LFWGYFGDKYGRRMGFLWSALCIAIFGVLSAFATNVYYLMACRAVVGFGVAGSLVPFDLMAEFLPDKERGRILLYFQLFWTVGIGFVAVLAWSVL 197
BLAST of mRNA_S-dermatodea_contig10250.185.1 vs. uniprot
Match: A0A1Y1IFI0_KLENI (Transporter family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IFI0_KLENI) HSP 1 Score: 75.1 bits (183), Expect = 9.580e-14 Identity = 37/92 (40.22%), Postives = 57/92 (61.96%), Query Frame = 2
Query: 11 GVVSDVYGRLIGFKIATILVVLFGLLTVAAPGFWWLLLFRSLVGVGAGGMEVPFDLLSEIVPRKDRAEVLLGVQATWAVGSLFVGVVAWAVL 286
G+VSD +GR +GF + ++FGLL+ +P +W+LL+ R+LVG G GG V F L E +P R L+ V+ W +GS+ ++AW V+
Sbjct: 120 GIVSDEWGRRVGFFATAVFTLVFGLLSAVSPAYWFLLVSRALVGFGLGGGSVIFSLFMEFIPSSRRGFWLVCVEFFWTIGSVAQALLAWIVM 211
BLAST of mRNA_S-dermatodea_contig10250.185.1 vs. uniprot
Match: A0A177BET0_9BILA (Putative transporter SVOPL n=1 Tax=Intoshia linei TaxID=1819745 RepID=A0A177BET0_9BILA) HSP 1 Score: 73.9 bits (180), Expect = 2.400e-13 Identity = 37/83 (44.58%), Postives = 54/83 (65.06%), Query Frame = 2
Query: 11 GVVSDVYGRLIGFKIATILVVLFGLLTVAAPGFWWLLLFRSLVGVGAGGMEVPFDLLSEIVPRKDRAEVLLGVQATWAVGSLF 259
G +SD YGRLI +++I ++ FG+ T +P ++W+L+ R +VG GG F L+SE +P K RA+VL+ WAVGSLF
Sbjct: 119 GTISDKYGRLITMFVSSIWILYFGIGTAFSPNYYWMLILRGIVGFAFGGAIQSFTLISEYLPSKYRAKVLIIYSLMWAVGSLF 201
BLAST of mRNA_S-dermatodea_contig10250.185.1 vs. uniprot
Match: A9V5I0_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V5I0_MONBE) HSP 1 Score: 73.6 bits (179), Expect = 3.310e-13 Identity = 38/92 (41.30%), Postives = 58/92 (63.04%), Query Frame = 2
Query: 11 GVVSDVYGRLIGFKIATILVVLFGLLTVAAPGFWWLLLFRSLVGVGAGGMEVPFDLLSEIVPRKDRAEVLLGVQATWAVGSLFVGVVAWAVL 286
G ++D YGR + LV + G+ + AP F L+ R+ VG+G GGM VPFD+L+E +P + R + L+G++ W G+LFV +AWA+L
Sbjct: 108 GPMADRYGRKAATFASAALVAIAGVASAFAPNFEVLVALRAFVGLGIGGMAVPFDILAEFMPSEYRGKALMGIEFFWTFGTLFVNGLAWAML 199
BLAST of mRNA_S-dermatodea_contig10250.185.1 vs. uniprot
Match: A0A7U0YEW3_9TREM (Synaptic vesicle glycoprotein 1 n=1 Tax=Cryptocotyle lingua TaxID=66766 RepID=A0A7U0YEW3_9TREM) HSP 1 Score: 69.7 bits (169), Expect = 7.460e-12 Identity = 38/83 (45.78%), Postives = 48/83 (57.83%), Query Frame = 2
Query: 11 GVVSDVYGRLIGFKIATILVVLFGLLTVAAPGFWWLLLFRSLVGVGAGGMEVPFDLLSEIVPRKDRAEVLLGVQATWAVGSLF 259
G +SD +GR F L+ +G LT +P + WLL+ R VG GG F LLSE +P K RA+VLLG Q WA+GS F
Sbjct: 119 GFISDRFGRWPTFFTVLTLISYYGFLTAVSPTYVWLLILRFAVGFAIGGCSSSFALLSEFLPVKHRAKVLLGFQIFWAIGSTF 201
BLAST of mRNA_S-dermatodea_contig10250.185.1 vs. uniprot
Match: A0A4S2LIQ0_OPIFE (MFS domain-containing protein n=3 Tax=Opisthorchiidae TaxID=6196 RepID=A0A4S2LIQ0_OPIFE) HSP 1 Score: 68.9 bits (167), Expect = 1.390e-11 Identity = 40/92 (43.48%), Postives = 53/92 (57.61%), Query Frame = 2
Query: 11 GVVSDVYGRLIGFKIATILVVLFGLLTVAAPGFWWLLLFRSLVGVGAGGMEVPFDLLSEIVPRKDRAEVLLGVQATWAVGSLFVGVVAWAVL 286
G VSD +GR F L+ +G LT +P + W+L+ R VG GG F LLSE +P K RA+VLLG Q WA+GS F +A+ +L
Sbjct: 119 GFVSDRFGRWPTFFTVLTLISYYGFLTAVSPTYVWVLILRFTVGFAIGGCSSSFALLSEFLPVKYRAKVLLGFQIFWAIGSTFEVGIAYLIL 210 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10250.185.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10250.185.1 >prot_S-dermatodea_contig10250.185.1 ID=prot_S-dermatodea_contig10250.185.1|Name=mRNA_S-dermatodea_contig10250.185.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=96bp DVPRCRKRRLRQAHWLQDRHDPRCAVWATDSGGPRLLVAAAIQELSRRRGback to top mRNA from alignment at S-dermatodea_contig10250:2117..3407+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10250.185.1 ID=mRNA_S-dermatodea_contig10250.185.1|Name=mRNA_S-dermatodea_contig10250.185.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1291bp|location=Sequence derived from alignment at S-dermatodea_contig10250:2117..3407+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10250:2117..3407+ >mRNA_S-dermatodea_contig10250.185.1 ID=mRNA_S-dermatodea_contig10250.185.1|Name=mRNA_S-dermatodea_contig10250.185.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=576bp|location=Sequence derived from alignment at S-dermatodea_contig10250:2117..3407+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |