mRNA_S-dermatodea_contig1025.184.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig1025.184.1
Unique NamemRNA_S-dermatodea_contig1025.184.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig1025.184.1 vs. uniprot
Match: D7FR43_ECTSI (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR43_ECTSI)

HSP 1 Score: 257 bits (656), Expect = 8.370e-83
Identity = 119/184 (64.67%), Postives = 141/184 (76.63%), Query Frame = 2
Query:  110 GVVCDPVTGACRLPNAAGAGDGVTAGLFPLPRTLRPLEKLEDEKGNEVDPSAL-QGKMVGVYASAGWCPPCRVFSPKLAEWAKERADDFVVVFVSLDKSEPEMREFAAGKGFLRLPFEPESARHHAAESFGANMLPTLVIVNGDSGKVVTSWGRSAINKNPKGCLEEWKAGREGVTWLQLVKPW 658
            G VCDP  G CR+P     G    A L PLP+ LRPL  LEDE G+++ P+A+ +GKM+GVY SAGWCPPCR FSP L++WAKE  ++F VVFVSLDKSE  MR++  GKGF+RLPFEPES RH AAESFG   LPTLV+VNGD+G VVTSWGRSAI KNP GCL+ WK G  GV+WLQL++PW
Sbjct:    8 GAVCDP-QGVCRMPARGDTGSAGEASLIPLPKALRPLSVLEDEAGHKLSPAAVFKGKMIGVYVSAGWCPPCRAFSPLLSKWAKEHKNEFEVVFVSLDKSEQAMRDYITGKGFVRLPFEPESDRHRAAESFGVQALPTLVVVNGDTGAVVTSWGRSAITKNPNGCLKAWKEGNHGVSWLQLLRPW 190          
BLAST of mRNA_S-dermatodea_contig1025.184.1 vs. uniprot
Match: A0A1Y1YRL7_9FUNG (Thioredoxin-like protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YRL7_9FUNG)

HSP 1 Score: 157 bits (396), Expect = 5.810e-44
Identity = 69/150 (46.00%), Postives = 101/150 (67.33%), Query Frame = 2
Query:  209 LRPLEKLEDEKGNEVDPSALQGKMVGVYASAGWCPPCRVFSPKLAEWAKERADDFVVVFVSLDKSEPEMREFAAGKGFLRLPFEPESARHHAAESFGANMLPTLVIVNGDSGKVVTSWGRSAINKNPKGCLEEWKAGREGVTWLQLVKPW 658
            L  +E+L D +  EV P  LQGK+VG+Y SA WCPPC+ FSP L ++A++  ++FVVV V+LDK++ +M +F  GK +L +PFE E  +           +P+L+IVN  + ++VT+WGRSAI+KN   CL+EWK G+ G +W  L+K W
Sbjct:   14 LDQIERLVDGEQKEVSPKVLQGKLVGLYFSASWCPPCKAFSPVLTQFAEDNKEEFVVVHVNLDKTKEDMMDFIQGKNWLSVPFEDEKVKKALGTQLKVYTIPSLIIVNTTTKQIVTTWGRSAISKNRDHCLQEWKEGKHGCSWYHLLKFW 163          
BLAST of mRNA_S-dermatodea_contig1025.184.1 vs. uniprot
Match: R1DWI2_EMIHU (Thioredoxin domain-containing protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DWI2_EMIHU)

HSP 1 Score: 142 bits (357), Expect = 1.300e-38
Identity = 69/129 (53.49%), Postives = 90/129 (69.77%), Query Frame = 2
Query:  230 EDEKGNEVDPSALQGKMVGVYASAGWCPPCRVFSPKLAEWAKERADDFVVVFVSLDKSEPEMREFAAGKGFLRLPFEPESARHHAAESFGANMLPTLVIVNGDSGKVVTSWGRSAINKNPKGCLEEWKA 616
            +D+ G +    AL GK+VG+Y SA WCPPC  FSP+L++     + DF VVFVS D+SE EM+ F A KGFL +PF   +AR    E  G +MLPTLVIV+  SGKV+T WGR+A+ +NPKGC++ WKA
Sbjct:    1 KDDAGVQQSAGALGGKIVGLYFSASWCPPCCKFSPELSKLRAAHSADFAVVFVSCDRSEAEMKSFIA-KGFLHIPFH-SAARRAIQEKLGVSMLPTLVIVDATSGKVLTDWGRAAVTRNPKGCVKSWKA 127          
BLAST of mRNA_S-dermatodea_contig1025.184.1 vs. uniprot
Match: A0A4P9XQ06_9FUNG (Thioredoxin-like-domain-containing protein n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XQ06_9FUNG)

HSP 1 Score: 143 bits (361), Expect = 4.630e-38
Identity = 62/128 (48.44%), Postives = 87/128 (67.97%), Query Frame = 2
Query:  278 MVGVYASAGWCPPCRVFSPKLAEWAKERADDFVVVFVSLDKSEPEMREFAAGK-GFLRLPFEPESARHHAAESFGANMLPTLVIVNGDSGKVVTSWGRSAINKNPKGCLEEWKAGREGVTWLQLVKPW 658
            ++GVY +A WCPPC+ FSP L  + ++ ADD  ++ VS D+ E    E+ + K G++ LPF+    R   A  F   M+PTL IV+ D+GK+V++WGRSAI KNP GCLEEW+ G  GV+W QL++PW
Sbjct:   89 LLGVYFTASWCPPCQQFSPVLLRFTQQHADDLQIILVSHDRDEDAAAEYLSNKLGWMTLPFDDVDRRRTLARLFEVQMIPTLAIVDADTGKIVSTWGRSAIMKNPDGCLEEWRQGGTGVSWWQLIRPW 216          
BLAST of mRNA_S-dermatodea_contig1025.184.1 vs. uniprot
Match: A0A7S2TKD0_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TKD0_9EUKA)

HSP 1 Score: 142 bits (359), Expect = 7.520e-38
Identity = 71/152 (46.71%), Postives = 98/152 (64.47%), Query Frame = 2
Query:  197 LPRTLRPLE-KLEDEKGNEVDPSALQGKMVGVYASAGWCPPCRVFSPKLAEWAKERADDFVVVFVSLDKSEPEMREFAAGKGFLRLPFEPESARHHAAESFGANMLPTLVIVNGDSGKVVTSWGRSAINKNPKGCLEEWKAGREGVTWLQLV 649
            LP  L  L   L DE GN V    L  K+VG+Y SAGWC PCR FSP L ++ +E  DDF VVFVS+D+SE +M E+  GKGFL++ ++ +S R         + +P+LVIV+G+ GKV+T+ GR AI  NP+GC+  WK G+ G++W   +
Sbjct:   47 LPGLLSHLTTSLRDEYGNAVGGDELSNKIVGLYFSAGWCGPCRAFSPVLKKFHEEYMDDFRVVFVSMDRSERDMVEYIKGKGFLQVDYKSKS-RTELITKCSVSSIPSLVIVDGNDGKVITTSGRMAITANPEGCVGSWKQGQSGISWCDCI 197          
BLAST of mRNA_S-dermatodea_contig1025.184.1 vs. uniprot
Match: R1CJ06_EMIHU (Thioredoxin domain-containing protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CJ06_EMIHU)

HSP 1 Score: 136 bits (343), Expect = 1.180e-36
Identity = 64/119 (53.78%), Postives = 86/119 (72.27%), Query Frame = 2
Query:  263 ALQGKMVGVYASAGWCPPCRVFSPKLAEWAKERADDFVVVFVSLDKSEPEMREFAAGKGFLRLPFEPESAR--HHAAESFGANMLPTLVIVNGDSGKVVTSWGRSAINKNPKGCLEEWK 613
            A++GK+VG+Y SA WC PC  FSP L++      +DFVVVFVS D+SE EM+ F+ GKGFLR+PF     +  HH       NM+PTLVIV+G +G+V+TSWGR+A+ +NP+GC+E WK
Sbjct:    2 AIRGKIVGIYFSAAWCKPCHRFSPVLSKLRAAHEEDFVVVFVSNDRSEAEMKRFSDGKGFLRVPFTSRRRQWLHHR---LAVNMVPTLVIVDGSTGEVLTSWGRAAVLRNPEGCVESWK 117          
BLAST of mRNA_S-dermatodea_contig1025.184.1 vs. uniprot
Match: A0A4P9Z3L3_9FUNG (Thioredoxin-like protein n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9Z3L3_9FUNG)

HSP 1 Score: 138 bits (347), Expect = 1.200e-36
Identity = 64/131 (48.85%), Postives = 86/131 (65.65%), Query Frame = 2
Query:  269 QGKMVGVYASAGWCPPCRVFSPKLAEWAKERADDFVVVFVSLDKSEPEMREFAAGK-GFLRLPFEPESARHHAAESFGANMLPTLVIVNGDSGKVVTSWGRSAINKNPKGCLEEWKAGREGVTWLQLVKPW 658
            Q  +VGVY +A WCPPC+ FSP L  +A+  A  F VV VSLD       E+  GK G+L +P+   + R    +  G +M+P L I+NG +G VV++WGRSAI KNP+ CLEEW+AG  GV+W QL++PW
Sbjct:   33 QPMLVGVYFTASWCPPCQAFSPTLRAFAQTHAAAFQVVLVSLDTDPDAAAEYIVGKTGWLAVPWADRARRQSLTKQLGVSMIPQLTILNGGTGAVVSTWGRSAILKNPQHCLEEWQAGGSGVSWWQLLRPW 163          
BLAST of mRNA_S-dermatodea_contig1025.184.1 vs. uniprot
Match: A0A139AF37_GONPJ (Thioredoxin-like protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AF37_GONPJ)

HSP 1 Score: 122 bits (306), Expect = 1.590e-29
Identity = 68/188 (36.17%), Postives = 104/188 (55.32%), Query Frame = 2
Query:   86 LQQKDAPDGVVCD------PVTGACRLPNAAGAGDGVTAGLFPLPRTLRPLEKLEDEKGNEVDP---SALQGKMVGVYASAGWCPPCRVFSPKLAEWAKERADDFVVVFVSLDKSEPEMREFAAGKGFLRLPFEPESARHHAAESFGANMLPTLVIVNGDSGKVVTSWGRSAINKNPKGCLEEWKAGR 622
            +  +  PDGV+CD      P      L +AA +    +     LP  L P + L D++G  +D    ++L+ K+VG+Y SA WCPPCR FSP L+E+ K   ++F VV+VS D ++ +M +   GKG+  +PFE    R   + +     +PTLV+V+G +G   +  GR+A+ K+     EEWK GR
Sbjct:    1 MPTESTPDGVICDGDVCYPPGMAPSHLKDAAASSQDSSE----LPGCLAPFKGLVDDQGKPLDDQQIASLRNKVVGLYFSAQWCPPCRAFSPVLSEFLKNHKEEFAVVYVSADNTKEQMMDNVRGKGYWVVPFEEALLRQSLSSTHKITGIPTLVVVDGKTGTAFSRSGRTALIKDKVKAWEEWKEGR 184          
BLAST of mRNA_S-dermatodea_contig1025.184.1 vs. uniprot
Match: A0A367ZKV4_9BACT (Thioredoxin n=1 Tax=Candidatus Ozemobacter sibiricus TaxID=2268124 RepID=A0A367ZKV4_9BACT)

HSP 1 Score: 112 bits (281), Expect = 1.100e-26
Identity = 62/157 (39.49%), Postives = 84/157 (53.50%), Query Frame = 2
Query:  149 PNAAGAGDGVTAGLFPLPRTLRPLEKLEDEKGNEVDPSALQGKMVGVYASAGWCPPCRVFSPKLAEWAKERADDFVVVFVSLDKSEPEMREFAAGKGFLRLPFEPESARHHA-AESFGANMLPTLVIVNGDSGKVVTSWGRSAINKNPKGCLEEWKA 616
            P  A A + V    FP        + L D +GN+V+P  L GK+VG+Y SA WCPPCR+FSP L  +      DF VVF+S DK+     E+    G      E  S   +A A+ +G   +PTL+I+ G  GK +T  GR+ + K P  CL +WKA
Sbjct:   29 PTPAPAQESVWKTFFP--------DGLLDPEGNKVEPDVLNGKLVGLYFSAHWCPPCRMFSPMLVAFRDAHTSDFEVVFISSDKNREAQFEYMKEVGMKWYTLEHRSEAANALAQKYGVRSIPTLIIL-GPDGKTITEDGRADVTKKPDSCLADWKA 176          
BLAST of mRNA_S-dermatodea_contig1025.184.1 vs. uniprot
Match: A0A1Y1XVT0_9FUNG (Thioredoxin-like_fold domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XVT0_9FUNG)

HSP 1 Score: 112 bits (281), Expect = 4.430e-26
Identity = 55/142 (38.73%), Postives = 84/142 (59.15%), Query Frame = 2
Query:  227 LEDEKGNEVDPSALQGKMVGVYASAGWC-PPCRVFSPKLAEWAKERADDFVVVFVSLDKSEPEMREFAAGKGFLRLPFEPESARHHAAESFGANMLPTLVIVNGDSGKVVTSWGRSAINKNPKGCLEEWKAGREGVTWLQLV 649
            LED +G +V    L  K+VG Y +A W   P  +F P+L ++A+E  D+F VV +S+DK +   + +   K FL +P++ E  R    E +   ++PTL + +    ++VT+WGR AI KN K CL+ WKAG  G++W QL 
Sbjct:   70 LEDSQGKKVPVYELADKIVGFYFTAQWVGEPVEIFDPQLVKFAEEHKDEFTVVVISVDKDKETFKAYMKDKPFLAVPYD-EPIRERILEEWAIKLIPTLTVYHPLRHEIVTTWGRGAIMKNGKKCLDAWKAGDSGLSWSQLA 210          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1025.184.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR43_ECTSI8.370e-8364.67Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
A0A1Y1YRL7_9FUNG5.810e-4446.00Thioredoxin-like protein n=1 Tax=Basidiobolus meri... [more]
R1DWI2_EMIHU1.300e-3853.49Thioredoxin domain-containing protein (Fragment) n... [more]
A0A4P9XQ06_9FUNG4.630e-3848.44Thioredoxin-like-domain-containing protein n=1 Tax... [more]
A0A7S2TKD0_9EUKA7.520e-3846.71Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
R1CJ06_EMIHU1.180e-3653.78Thioredoxin domain-containing protein (Fragment) n... [more]
A0A4P9Z3L3_9FUNG1.200e-3648.85Thioredoxin-like protein n=1 Tax=Syncephalis pseud... [more]
A0A139AF37_GONPJ1.590e-2936.17Thioredoxin-like protein n=1 Tax=Gonapodya prolife... [more]
A0A367ZKV4_9BACT1.100e-2639.49Thioredoxin n=1 Tax=Candidatus Ozemobacter sibiric... [more]
A0A1Y1XVT0_9FUNG4.430e-2638.73Thioredoxin-like_fold domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1025contigS-dermatodea_contig1025:7869..16018 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score258.5
Seed ortholog evalue2.7e-66
Seed eggNOG ortholog2880.D7FR43
EggNOG free text desc.cellular oxidant detoxification
EggNOG OGsKOG2501@1,KOG2501@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionThioredoxin-like fold
Ec32 orthologEc-09_003560.1
Exons3
Model size936
Cds size606
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1025.184.1prot_S-dermatodea_contig1025.184.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig1025 8144..15963 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924147.6453-UTR-S-dermatodea_contig1025:7868..81431622924147.6453-UTR-S-dermatodea_contig1025:7868..8143Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1025 7869..8143 -
1694079050.184464-UTR-S-dermatodea_contig1025:7868..81431694079050.184464-UTR-S-dermatodea_contig1025:7868..8143Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1025 7869..8143 -
1622924147.6894403-UTR-S-dermatodea_contig1025:15963..160181622924147.6894403-UTR-S-dermatodea_contig1025:15963..16018Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1025 15964..16018 -
1694079050.231883-UTR-S-dermatodea_contig1025:15963..160181694079050.231883-UTR-S-dermatodea_contig1025:15963..16018Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1025 15964..16018 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924147.6580572-CDS-S-dermatodea_contig1025:8143..84021622924147.6580572-CDS-S-dermatodea_contig1025:8143..8402Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1025 8144..8402 -
1694079050.1979916-CDS-S-dermatodea_contig1025:8143..84021694079050.1979916-CDS-S-dermatodea_contig1025:8143..8402Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1025 8144..8402 -
1622924147.67035-CDS-S-dermatodea_contig1025:13589..137141622924147.67035-CDS-S-dermatodea_contig1025:13589..13714Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1025 13590..13714 -
1694079050.2076976-CDS-S-dermatodea_contig1025:13589..137141694079050.2076976-CDS-S-dermatodea_contig1025:13589..13714Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1025 13590..13714 -
1622924147.681223-CDS-S-dermatodea_contig1025:15741..159631622924147.681223-CDS-S-dermatodea_contig1025:15741..15963Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1025 15742..15963 -
1694079050.2185416-CDS-S-dermatodea_contig1025:15741..159631694079050.2185416-CDS-S-dermatodea_contig1025:15741..15963Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1025 15742..15963 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig1025.184.1

>prot_S-dermatodea_contig1025.184.1 ID=prot_S-dermatodea_contig1025.184.1|Name=mRNA_S-dermatodea_contig1025.184.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=202bp
MASPASDSALLQQKDAPDGVVCDPVTGACRLPNAAGAGDGVTAGLFPLPR
TLRPLEKLEDEKGNEVDPSALQGKMVGVYASAGWCPPCRVFSPKLAEWAK
ERADDFVVVFVSLDKSEPEMREFAAGKGFLRLPFEPESARHHAAESFGAN
MLPTLVIVNGDSGKVVTSWGRSAINKNPKGCLEEWKAGREGVTWLQLVKP
W*
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mRNA from alignment at S-dermatodea_contig1025:7869..16018-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig1025.184.1 ID=mRNA_S-dermatodea_contig1025.184.1|Name=mRNA_S-dermatodea_contig1025.184.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=8150bp|location=Sequence derived from alignment at S-dermatodea_contig1025:7869..16018- (Saccorhiza dermatodea SderLu1190fm monoicous)
TGGAGCACCACGATTGCCTCTCTCATTTACCCCTGGCTCCGCACAACCAG ACATCATGGCGTCACCAGCCTCAGACTCAGCGCTGCTACAACAGAAGGAC GCTCCCGACGGAGTAGTGTGCGATCCAGTGACCGGTGCGTGTCGGTTGCC TAATGCTGCCGGGGCAGGCGACGGCGTGACCGCGGGGCTCTTTCCTCTCC CCAGGACCCTGAGGCCCCTGGAGAAGCTGGAGGATGAGAAAGGCAACGAG GTGGACCCTAGCGCTTTACAGGGCAAGGTGAGGAGAGGGCATCCATGGCT TGAGGGCCTTGGGTGGTTTGCTTGAGGGCCTTGGGTGATTTGAGGGCTTC TCTATTCCGCGGCATCATTGTTATAAATGCACTCAGATATTCTGCCTGCT CATAGGTACGTATCAATACGTACTCGCACACCAAGTGTGTTTCAGTTGTG TCTTTGCAGCGTGGAGGCTCTGGTGGCGATATTACGTGCTGTTCTGTGTT GCGTTCCTCAAGCGATCGTTTTGTCGATTTGCGCTCTTCCCTCGATACGT ATTTGTGCATGAGTGGCGCGGACGACCGCCCGACTGCTTCGTTTGAGAGG GTAGTTCTCCATAAAGGCGTGACTTTGGGAAAGAAAGGGACTCACGTGGT ATCGCCATCTATCTACATTAGACATGGCCCCCTTCAACTGGAATAGGGGG TTGACTCGCGATTCATGAATCTTACCATATGATATATACACAGCAGGCAA TACTTTGGCATACGTTATACTGCTGGATAGAGCTACCGCAGTAGTATATA TGAAGACCGAGCCTGCGCATTCGTAAGCGAACGTCCTTGGGACTTGTGCG CACGAGTGTGGCCCAAGCGACGGGGACATCCTGACTCTCATGACTATTAT ACAGCCTTCTTTTTTCAAAATATAGAAACAAAACACAGAAAGTGCACAAT CCATAACTCAACCGGACAGGACCCAGTTGGACTTTGTTACTGTTGTATAC ACAAAGCTGAGCTAATTTCACGTCCTCCCGAAAGAAAATATCCTTAAAAT AGTAGACCATGGTCCAGGGTACTTTTTACACTATGTATCATATACTACAG CTGTACTTGTACAAGTAGTCCGCCTCTCGTGCCTATTGCAGTCCTACTTG TACTTGTATGTATACAGCAGTAGTTGTATACTACTCTACTGTCTGTGGAT GGAACAGTTCGACATAGGGACCAACTCTCGTGGGGGCTCGCTAAACTGCC CTGCGTCCCGATGGCCGCATGCATGCGGTATGATACTGCCCTGTAGATTG AGATACATATGATACAAGGAGTGCGAATGCGGTAAGGACGACGGAGGTGG CGTGTCCGTGTGTATCATACAATAAGCACCTTAGGCGTGAAGCTTGGACA GGTTTGGCGGGCACCAGGATTGTGGGTTGTCGAAGCGAGAGAGAGCAGGT TACTCTACCGAGTTGTTGAACAGCTTGTCCTTGGTCTTCTTGTCTCGAGT CCGATACTAAAGCTCTACTGCTGTATGTGACACGTAAGAAACCTCTTCTC GTTTTGATGCCCCCAAAAACATAAACATAAACTTATACTTTTTAATAGTG TCTCGTTGTTCTATATACATGCTATCATAGGGCTATCTACAAGTATGTAA GAACGCTCTTCTGGTGTTGATACCCCCAAAACATCCAGAATTAACCCTTT AGGTACTACTATGAATAGGCTCTCCGAAACGACCAAAAACTCTCTGGATG CCAGTCGACAGCTACGACAGCCCCGGTTCCCTTGGGCTCCTTCCTTTCTC ATATCCTGCGCTATAAGCCGTGGGCTCCGTTCCCCAGGGCTCCGCTTCAA GCACGCCTCATTACGTGCTAACCGCACCTCCAAACAGGGGGCTTGTACCA AAAGGGTTAACACGTCTCTCTTTTTCTACATACTAGAGGTATATACTGAA CATATCATACATATCATACATGCGTCAGGTCTATAGTTTCGGGCATCCGC GACTGATGATACTGAACAACCCTGTGCTGGTGCAGCGTGTGCGCTCCAAA GACGGTTCAATTTTACTTCATTTTTTTAAGCAAAAGAAAACACATGAAAA AAATATAACACACACAAAAGAAAGCAGGTACTATAAGATGCTGCTTTTCA TCCCGTGAACGCTGTGTATGTCTCTCCCCTCTTCTCATACTTACATATTG TACCATTTTACAATTTATTGTTGAGCGAACGATGTCTGACAGCGCGTTAT ATTTACCGCATCGCCGCACGCTGCGCCTCGCCTTTTTCGCTCACCAAACG ACAGATGGTCGGCGTGTACGCCTCGGCCGGGTGGTGCCCTCCCTGCAGGG TATTCTCGCCAAAGCTTGCCGAGTGGGCCAAGGAGCGCGCCGATGACTTC GTGGTGGTGTTCGTATCGTTGGACAAGAGGTGCGGTACAGGCAGACAGCA GTAGCAAGCACGAAGCCGGAAGCAGTATATAATAGTATCATTGCCGTTTA TTGAATAAATTCATTTGATTGATTTGCACACGTACATCATAGCCGATCGG CTTAGTCCGACCCGGCTTGTGGTCAGATGCTTTTTAACAAAGAGTCGATG ATAGAATAACGGTTCACAATCAAAGCGCCTACTTCTATGTGCAATACACG ATACCGTCCCTGGTACTTACTTGATACCACCCAGATATAGAAAACGCCGG GAGAGGCATCGGAATCAGGCAATGCCCCCTCGCCGTGCGGTAGACTTTTG ACACTACAAGACATGGTCGACAACGAAAACTGCAGTAAGCACACACATCA CAGGAGGGATACCCCCCCGAGAATTTCTTTTGACCGGCGGTACATATCGC GGGGACTCATGATCACTCACGATTTGGAAATTGAGTTTTTCTTGTCGCGC GATGTGTACACACTATGATATCATAGTCCACCTGTACATTTATAGTCCCC CCCGGCACATATGCCTTACTGAGAGAGTAAAGGACGTACAGTACCTACTT TCAGTTTCCCCTGAATCAGTGTGCTCGTGAGTTAGGGGTGTACATGGGAA CTAGATTATGTTTTTCTGTAAAAAAAACAGTATGATACCCAGCAGCAATT AATTGTTTGTTGGCACTTGGTCGACAAGGAATTTTCCGGTGGATTTCGTT GGCCAAAGCTGACAGTCTGTGATCGGAAAAGCCGTCGAGGAAAACTAAAT TTAACTTTTGGCTCGACCCACAGACAGGTGTGTAAGGGTTTGGTTGCGGA TTAGGGTGGTTGAGGTCGACGCCCGGGGTCCCCCATACTAGCAGCAGCGC CTAACGCAAACAAATACTGTCTCCCAAACATGGTTGTCGATCAACTACTC TGTACGTACAGTAGTGGTAAATCGCTCTCGTACATATGATACTTGTACTG AACTGTCACAAGTCATGAGAGCCTATTACTGTATGCTGCTGCTCTCATAC ATATGATACTCCTATACGGCGGTGGTATGTGGTATGTGGTATATGTGCAT GCGTATTGTAGTTTGCTCATTAATGCCCATACGTGTATACGAGGGTGCGG ACAATCGGCGTTGATAGTTGATATGCATGCATACGTACGTGGGAGGACAA GAGAGACAGGGTTGTGTGGAGACGCCGCTGTCGACAAGTAGCAGCGCACA CTAGTTGTGATGCCGTGCGGCATGGTTCCACCGTGCGCTTGCTTCCCCGT GGCGTTTCAGGAACGGCGGTGCTTCGTGGTTTATGAATTCTACATATGAT CCTCCACCGGGCGACGTATATGTGGCTTGCAACTAGTATAACAGTAATAT GATACCGTACAAGTATACCAAAAAGAGAAGGGCCCTGCCCTTTTCCGCGA GCGAAGTGTGTTATGTACAAGAGAAGATGGTTGCAACGCTAGACGCATGC ACCCTCGTCGAAGCGCCCACTTGCTACTTACAGCAGAGTTACAGCAGCAG TTTGCTATACGTAAGCGGAGAGAGATGCTCAGAATTGGTCGTGTCCATGT CCTCGAGCATATATGTATATATGCACTTGTTGTTTGTCGGGCGAGCCGAT GGATATGGGGCACGGCACTGAAAAGATAACCCATCAGTATTATACATCCT ACGACATGCCAGCAGTTTTTTCTCTAAACCTCCGGTGTACAGCATGCAGG GATGACTTGTCGCACCGCGTGTATGTGCCAACGGAGCTCACCCCACTCCC GATAGTCCCACTTTCGCACAAAAAAAATGCAGCGTATTGATCAAGTTGTG TATACAGCCTGGTATATACAGTATGTTTGTATATATGATGTATACAGCAG TACTGACTGTACGTACACCGGCTCTCTGTTATTGCAACCGGTCCATACAT ATCACATGATACGTACCCCCGTACCAAGGCCTGACCGCGTGGAATGTTCT GTCGAAATGGCGGTCTAATGTTGATGTACAAGTACTACAGTAACTACTAT TAATAGTAGTTTTTCCCGGACACCGAGAGAAAAAGGACATGACCCACCAC ATGTATTTAGAACGTGACTGATCGAATGCTTAAAACCATAGACGAAGAAT TTAGAATTTTCTGCCATTCGGAATATATATTTTCCGACGCTTTTCTTTGT TTCTGGATCAACCAGAAAAACTGCGGAAACGTTTCCCCTTCAAAGCTGAT GGGCGAAACACTCATACTAATAATCTATTAATATTTATAAACGTGTTCGA CCGGAATTTTAGGGATGGGTAGAGAGCTAATTTTTCCTGCTATTTTTTCC GGGTTGTGGTGTTTGAGGTCAATGCCTCGATCACCAGAAGCAGTCACCAG AAGGGTTGTTTGGACAATCCCTCCGAACCAAGAAACGTTTCCGGACAGAT CAACTTTCTCGCGGAGGCGACATCAAAACTGCTCTGGGTGATGTTGGCCA CAAGATGTTTCGGCCAATCAAAATACCTCCCTTTCAAAGAGTGCCCAATA GGGAAAAACTGCAGGCACCTTCAATATTCTCTCCACCGGAATTTTAGGGA TGGGTAGTTGTGGAGCTAATTTTTCCTGCCACCTTTTTTTTCGTGGTATA TTTTTCTGGGCTGTGGTGTTTGATGTAATTCCTCGATCACCAGAAACCAA ACGCCAGCTGCTATAATAGCAGTGCTCTTGTGTTGTTTGGACAGTTCCTC CGAACCAAGAAGCTTTCCCTGACCACTCAAGCACCATTCTCGCCAAAGTG GTGTCAAAATTGCGGATGATGCCGGACCGGTGACCACAAGATGTTTCGGC CACTCGAAATAGCTCCCTTTTCAAATCTTGTCCAATAGGGAAACAAAATC CGGGCAACGTTTATCTTTCTCCCAACCGGAATTTTAGGGATGGGCAGTTG TGGAGCTACTGTTTCCTCCTATTTTTTTCGTGCTGTTTTTTTCGTGCTAT TTTTTCCCGGGCTGTGGTGTTTGATGCAATTCCTCGATCACCAGAAACCA AACACCAGCTGCTAGCAGTGGTCCTGTGTTCTTTGGACAATTCCTCCGAA CAACAAGAAACGTTCCCTGACTAATCAGGCACCATTCTCGGCGAGGTGGC GTCAAAATTGTGGACGATGCCGGGCTTTTGACCACTATAATAGATGTTTC GGCCAATCAAAACAGCTCCCTTTCAAAGATTGCCCAATAGGAAAACTGCG GGCACCTTTTCGCTTTTTCTCTCAACCGGATTTTTTGGGGATGAGTATTG TGGAGGAATTTCCCCCCCCCCATTTTTTCGAGATGGCCTTGGTTCGTGTT TGGTCCAATTGTTTTGCTCTTATCACGAGAAGCCAGCCAACAGGATTATT TGAACAATTCCTCCGAACCAAGAAAGACTCCCTGACCAATCAATCGCCAA TATCACCGAAGTGACATCAAAACTGTGGAATGTGTTCAGACCGTTGACCA CCAGATGTTTCGGCCAATCAAAATATACCCCTTTCAAAGATGGCCCAATA GGAAACTGCTGGCACGTTTTCGATTTTTCTCTCAACCGGAATATTGGGGA TGAGTACAGTATCGTAAACGCATTTTTTCCTGCGATTTTTCGAATCGGTT TTGGTTGGTGTGCGGATTGTAGTGTGGGCAGAGCCCGCGCAGAGCCCGAA GTGTGAGGCAATTGATGCCTCAGGCGACCGAATTGTCTTTAAAATGGGTG GCGTGAAGTACTATTTATCACACACCGAGGTGGGGTCTTGGACAAGCCGA GGTTGGTCTTGGGCAACCACACCCGCGAGGGCACAGCCACAAGGCAAGAG TGTCTGTCCCGCGGGGAGGTGGTGTATGCGTGTAAGGAGGCGTCTCTACT AGTACATCCTCAAGGGAATGTCACGTCGAGGGGACCTGGTATCCACAGGT GTGTGCTTTGATTTCCCTCAAAATCACCAGAAGCCAACCACTATAACAGG TTTATTTGGACAATTCCTCCGAGCCAAGGAACTTTCCCTGACGAAGCACG ATTCTCACCGAAGTGGAGCCATAACTACTGTGGATGATACCAGACCGTTG GCCAACTCTTTTCGGCCGATCAAAATAAATAGATCCCTTGTAAAGATTGA AGATTGCCCCAGAGGGACAATGGCGAATGGCGGGCACCTTACCCTCTTTC TCCCTTTCTTCCGCTTTTCTCCACCCATTTGAGCGCCTAAAAATCAAGGA TTTCAAAAACATACAGCGAGCGTTGGGGTCCCACCTTTTCAAGAGGGAAG ATGGTCCAAGCTACACCAATGGAAGCTCAGTTGTTGTATAGGACGCTGAG CCCCCCCCCCCCGCCGCCAGGCATGGGGTGGTTCATGAGTATGTCCTATG AGCTTGGAGACCTCGGCCGAGTCTTGTTTCTCCCCAAAGGGGCGACGCGC ATCACATCCTACAGGGCACTTGCTGAACATTGGATTGTGGGAACGCCCTA GAGCAACCATTGACTTGTGATTCGTACTCCGCTAGAAATACTCATGGGTA GATTAATATAGTCCGAGTGTGTATCTATCACACAATACCGTCGTGCATGA TGTGTGCGTGCGGCGCTTTTGCGTTCGCACGGAGATCAATTTCCCTCTGC GTCACTTGGAGTGAAATATAGCCACGCCTACTAAATGTGCACTATTTGGT TGCCCGGTGTGTATTAATCAACCCAAGGCATATTGGTTTGGCGTTGCAAA CGCAAGGATGACGACTATCATAGCAGCTGGTATCATCCTTGTGAAACGCA GCCTGGCCGGCGAACCGAAAACCCGGCATGACCGCTCCGTCCCGGCATTG TTGAGGCGCGTGGTCTATGTCTGTTTGGATGCGACATGCGTTTGATTGAT TGATTTGATTTGATTTGATTTGACTTGATTTGATTTGATCAAGAAAATTT AACTGATTTGTCACACTTAGGGCCTACCGACCGGCCCACCCATTGTTGCC GATCCCACCCACTCGTGGTCAGATAAAAAATCCAGAGGAGATATATCGAA AATACCATACTGGCACGCAACTACCTACATACAGTACACATAATAAAAAG GAATTGACACAAAACTCTCAGAAACAGACATGAGCACACACACATAAACC CCTGCCACAACCCGCTCCACATCTCCGCCTCCCCACCCTAATCCACTTCT CGAATTTACCGTGCAGCGAGCCAGAAATGCGCGAGTTCGCGGCCGGGAAA GGCTTCCTGCGCCTCCCCTTCGAGCCCGAGTCGGCGCGCCACCACGCCGC CGAGTCCTTCGGTGCTAACATGCTGCCGACCCTGGTAATCGTTAACGGAG ACAGCGGAAAAGTGGTAACCTCGTGGGGGAGATCGGCGATTAACAAGAAT CCTAAGGGTTGCCTCGAGGAATGGAAGGCGGGACGCGAAGGGGTGACTTG GCTTCAGCTTGTCAAGCCCTGGTAGAGCTGTTGTTGCGGGGTTAGGTGCG GGTCAGGCCCGCGCGGCTGGCTGGCTAGCTGCTGCTGTGTGTACTCGGGC CGCCATTTGTTTTTTCACACTCGAGAGATCCGGGTTTGGGGTTTTTCGCG TTTTATGACGAAAAAACGGGCCTTCATTTTGTTTTGTTTTTTGGCAGTGA CTTTTTCGCTGTGACTTTTGTTGCTCATATATGTGTATTTTTTTCATGTA CAACTACAGGTATAATTTTATTTTTTGTGATTTTGTTTAGGATTTGGGAC
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Coding sequence (CDS) from alignment at S-dermatodea_contig1025:7869..16018-

>mRNA_S-dermatodea_contig1025.184.1 ID=mRNA_S-dermatodea_contig1025.184.1|Name=mRNA_S-dermatodea_contig1025.184.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1212bp|location=Sequence derived from alignment at S-dermatodea_contig1025:7869..16018- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGCGTCACCAGCCTCAGACTCAGCGCTGCTACAACAGAAGGACGCTCC
CGACGGAGTAGTGTGCGATCCAGTGACCGGTGCGTGTCGGTTGCCTAATG
CTGCCGGGGCAGGCGACGGCGTGACCGCGGGGCTCTTTCCTCTCCCCAGG
ACCCTGAGGCCCCTGGAGAAGCTGGAGGATGAGAAAGGCAACGAGGTGGA
CCCTAGCGCTTTACAGGGCAAGATGGCGTCACCAGCCTCAGACTCAGCGC
TGCTACAACAGAAGGACGCTCCCGACGGAGTAGTGTGCGATCCAGTGACC
GGTGCGTGTCGGTTGCCTAATGCTGCCGGGGCAGGCGACGGCGTGACCGC
GGGGCTCTTTCCTCTCCCCAGGACCCTGAGGCCCCTGGAGAAGCTGGAGG
ATGAGAAAGGCAACGAGGTGGACCCTAGCGCTTTACAGGGCAAGATGGTC
GGCGTGTACGCCTCGGCCGGGTGGTGCCCTCCCTGCAGGGTATTCTCGCC
AAAGCTTGCCGAGTGGGCCAAGGAGCGCGCCGATGACTTCGTGGTGGTGT
TCGTATCGTTGGACAAGAGATGGTCGGCGTGTACGCCTCGGCCGGGTGGT
GCCCTCCCTGCAGGGTATTCTCGCCAAAGCTTGCCGAGTGGGCCAAGGAG
CGCGCCGATGACTTCGTGGTGGTGTTCGTATCGTTGGACAAGAGCGAGCC
AGAAATGCGCGAGTTCGCGGCCGGGAAAGGCTTCCTGCGCCTCCCCTTCG
AGCCCGAGTCGGCGCGCCACCACGCCGCCGAGTCCTTCGGTGCTAACATG
CTGCCGACCCTGGTAATCGTTAACGGAGACAGCGGAAAAGTGGTAACCTC
GTGGGGGAGATCGGCGATTAACAAGAATCCTAAGGGTTGCCTCGAGGAAT
GGAAGGCGGGACGCGAAGGGGTGACTTGGCTTCAGCTTGTCAAGCCCTGG
TAGCGAGCCAGAAATGCGCGAGTTCGCGGCCGGGAAAGGCTTCCTGCGCC
TCCCCTTCGAGCCCGAGTCGGCGCGCCACCACGCCGCCGAGTCCTTCGGT
GCTAACATGCTGCCGACCCTGGTAATCGTTAACGGAGACAGCGGAAAAGT
GGTAACCTCGTGGGGGAGATCGGCGATTAACAAGAATCCTAAGGGTTGCC
TCGAGGAATGGAAGGCGGGACGCGAAGGGGTGACTTGGCTTCAGCTTGTC
AAGCCCTGGTAG
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