mRNA_S-dermatodea_contig1025.184.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig1025.184.1 vs. uniprot
Match: D7FR43_ECTSI (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR43_ECTSI) HSP 1 Score: 257 bits (656), Expect = 8.370e-83 Identity = 119/184 (64.67%), Postives = 141/184 (76.63%), Query Frame = 2
Query: 110 GVVCDPVTGACRLPNAAGAGDGVTAGLFPLPRTLRPLEKLEDEKGNEVDPSAL-QGKMVGVYASAGWCPPCRVFSPKLAEWAKERADDFVVVFVSLDKSEPEMREFAAGKGFLRLPFEPESARHHAAESFGANMLPTLVIVNGDSGKVVTSWGRSAINKNPKGCLEEWKAGREGVTWLQLVKPW 658
G VCDP G CR+P G A L PLP+ LRPL LEDE G+++ P+A+ +GKM+GVY SAGWCPPCR FSP L++WAKE ++F VVFVSLDKSE MR++ GKGF+RLPFEPES RH AAESFG LPTLV+VNGD+G VVTSWGRSAI KNP GCL+ WK G GV+WLQL++PW
Sbjct: 8 GAVCDP-QGVCRMPARGDTGSAGEASLIPLPKALRPLSVLEDEAGHKLSPAAVFKGKMIGVYVSAGWCPPCRAFSPLLSKWAKEHKNEFEVVFVSLDKSEQAMRDYITGKGFVRLPFEPESDRHRAAESFGVQALPTLVVVNGDTGAVVTSWGRSAITKNPNGCLKAWKEGNHGVSWLQLLRPW 190
BLAST of mRNA_S-dermatodea_contig1025.184.1 vs. uniprot
Match: A0A1Y1YRL7_9FUNG (Thioredoxin-like protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YRL7_9FUNG) HSP 1 Score: 157 bits (396), Expect = 5.810e-44 Identity = 69/150 (46.00%), Postives = 101/150 (67.33%), Query Frame = 2
Query: 209 LRPLEKLEDEKGNEVDPSALQGKMVGVYASAGWCPPCRVFSPKLAEWAKERADDFVVVFVSLDKSEPEMREFAAGKGFLRLPFEPESARHHAAESFGANMLPTLVIVNGDSGKVVTSWGRSAINKNPKGCLEEWKAGREGVTWLQLVKPW 658
L +E+L D + EV P LQGK+VG+Y SA WCPPC+ FSP L ++A++ ++FVVV V+LDK++ +M +F GK +L +PFE E + +P+L+IVN + ++VT+WGRSAI+KN CL+EWK G+ G +W L+K W
Sbjct: 14 LDQIERLVDGEQKEVSPKVLQGKLVGLYFSASWCPPCKAFSPVLTQFAEDNKEEFVVVHVNLDKTKEDMMDFIQGKNWLSVPFEDEKVKKALGTQLKVYTIPSLIIVNTTTKQIVTTWGRSAISKNRDHCLQEWKEGKHGCSWYHLLKFW 163
BLAST of mRNA_S-dermatodea_contig1025.184.1 vs. uniprot
Match: R1DWI2_EMIHU (Thioredoxin domain-containing protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DWI2_EMIHU) HSP 1 Score: 142 bits (357), Expect = 1.300e-38 Identity = 69/129 (53.49%), Postives = 90/129 (69.77%), Query Frame = 2
Query: 230 EDEKGNEVDPSALQGKMVGVYASAGWCPPCRVFSPKLAEWAKERADDFVVVFVSLDKSEPEMREFAAGKGFLRLPFEPESARHHAAESFGANMLPTLVIVNGDSGKVVTSWGRSAINKNPKGCLEEWKA 616
+D+ G + AL GK+VG+Y SA WCPPC FSP+L++ + DF VVFVS D+SE EM+ F A KGFL +PF +AR E G +MLPTLVIV+ SGKV+T WGR+A+ +NPKGC++ WKA
Sbjct: 1 KDDAGVQQSAGALGGKIVGLYFSASWCPPCCKFSPELSKLRAAHSADFAVVFVSCDRSEAEMKSFIA-KGFLHIPFH-SAARRAIQEKLGVSMLPTLVIVDATSGKVLTDWGRAAVTRNPKGCVKSWKA 127
BLAST of mRNA_S-dermatodea_contig1025.184.1 vs. uniprot
Match: A0A4P9XQ06_9FUNG (Thioredoxin-like-domain-containing protein n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XQ06_9FUNG) HSP 1 Score: 143 bits (361), Expect = 4.630e-38 Identity = 62/128 (48.44%), Postives = 87/128 (67.97%), Query Frame = 2
Query: 278 MVGVYASAGWCPPCRVFSPKLAEWAKERADDFVVVFVSLDKSEPEMREFAAGK-GFLRLPFEPESARHHAAESFGANMLPTLVIVNGDSGKVVTSWGRSAINKNPKGCLEEWKAGREGVTWLQLVKPW 658
++GVY +A WCPPC+ FSP L + ++ ADD ++ VS D+ E E+ + K G++ LPF+ R A F M+PTL IV+ D+GK+V++WGRSAI KNP GCLEEW+ G GV+W QL++PW
Sbjct: 89 LLGVYFTASWCPPCQQFSPVLLRFTQQHADDLQIILVSHDRDEDAAAEYLSNKLGWMTLPFDDVDRRRTLARLFEVQMIPTLAIVDADTGKIVSTWGRSAIMKNPDGCLEEWRQGGTGVSWWQLIRPW 216
BLAST of mRNA_S-dermatodea_contig1025.184.1 vs. uniprot
Match: A0A7S2TKD0_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TKD0_9EUKA) HSP 1 Score: 142 bits (359), Expect = 7.520e-38 Identity = 71/152 (46.71%), Postives = 98/152 (64.47%), Query Frame = 2
Query: 197 LPRTLRPLE-KLEDEKGNEVDPSALQGKMVGVYASAGWCPPCRVFSPKLAEWAKERADDFVVVFVSLDKSEPEMREFAAGKGFLRLPFEPESARHHAAESFGANMLPTLVIVNGDSGKVVTSWGRSAINKNPKGCLEEWKAGREGVTWLQLV 649
LP L L L DE GN V L K+VG+Y SAGWC PCR FSP L ++ +E DDF VVFVS+D+SE +M E+ GKGFL++ ++ +S R + +P+LVIV+G+ GKV+T+ GR AI NP+GC+ WK G+ G++W +
Sbjct: 47 LPGLLSHLTTSLRDEYGNAVGGDELSNKIVGLYFSAGWCGPCRAFSPVLKKFHEEYMDDFRVVFVSMDRSERDMVEYIKGKGFLQVDYKSKS-RTELITKCSVSSIPSLVIVDGNDGKVITTSGRMAITANPEGCVGSWKQGQSGISWCDCI 197
BLAST of mRNA_S-dermatodea_contig1025.184.1 vs. uniprot
Match: R1CJ06_EMIHU (Thioredoxin domain-containing protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CJ06_EMIHU) HSP 1 Score: 136 bits (343), Expect = 1.180e-36 Identity = 64/119 (53.78%), Postives = 86/119 (72.27%), Query Frame = 2
Query: 263 ALQGKMVGVYASAGWCPPCRVFSPKLAEWAKERADDFVVVFVSLDKSEPEMREFAAGKGFLRLPFEPESAR--HHAAESFGANMLPTLVIVNGDSGKVVTSWGRSAINKNPKGCLEEWK 613
A++GK+VG+Y SA WC PC FSP L++ +DFVVVFVS D+SE EM+ F+ GKGFLR+PF + HH NM+PTLVIV+G +G+V+TSWGR+A+ +NP+GC+E WK
Sbjct: 2 AIRGKIVGIYFSAAWCKPCHRFSPVLSKLRAAHEEDFVVVFVSNDRSEAEMKRFSDGKGFLRVPFTSRRRQWLHHR---LAVNMVPTLVIVDGSTGEVLTSWGRAAVLRNPEGCVESWK 117
BLAST of mRNA_S-dermatodea_contig1025.184.1 vs. uniprot
Match: A0A4P9Z3L3_9FUNG (Thioredoxin-like protein n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9Z3L3_9FUNG) HSP 1 Score: 138 bits (347), Expect = 1.200e-36 Identity = 64/131 (48.85%), Postives = 86/131 (65.65%), Query Frame = 2
Query: 269 QGKMVGVYASAGWCPPCRVFSPKLAEWAKERADDFVVVFVSLDKSEPEMREFAAGK-GFLRLPFEPESARHHAAESFGANMLPTLVIVNGDSGKVVTSWGRSAINKNPKGCLEEWKAGREGVTWLQLVKPW 658
Q +VGVY +A WCPPC+ FSP L +A+ A F VV VSLD E+ GK G+L +P+ + R + G +M+P L I+NG +G VV++WGRSAI KNP+ CLEEW+AG GV+W QL++PW
Sbjct: 33 QPMLVGVYFTASWCPPCQAFSPTLRAFAQTHAAAFQVVLVSLDTDPDAAAEYIVGKTGWLAVPWADRARRQSLTKQLGVSMIPQLTILNGGTGAVVSTWGRSAILKNPQHCLEEWQAGGSGVSWWQLLRPW 163
BLAST of mRNA_S-dermatodea_contig1025.184.1 vs. uniprot
Match: A0A139AF37_GONPJ (Thioredoxin-like protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AF37_GONPJ) HSP 1 Score: 122 bits (306), Expect = 1.590e-29 Identity = 68/188 (36.17%), Postives = 104/188 (55.32%), Query Frame = 2
Query: 86 LQQKDAPDGVVCD------PVTGACRLPNAAGAGDGVTAGLFPLPRTLRPLEKLEDEKGNEVDP---SALQGKMVGVYASAGWCPPCRVFSPKLAEWAKERADDFVVVFVSLDKSEPEMREFAAGKGFLRLPFEPESARHHAAESFGANMLPTLVIVNGDSGKVVTSWGRSAINKNPKGCLEEWKAGR 622
+ + PDGV+CD P L +AA + + LP L P + L D++G +D ++L+ K+VG+Y SA WCPPCR FSP L+E+ K ++F VV+VS D ++ +M + GKG+ +PFE R + + +PTLV+V+G +G + GR+A+ K+ EEWK GR
Sbjct: 1 MPTESTPDGVICDGDVCYPPGMAPSHLKDAAASSQDSSE----LPGCLAPFKGLVDDQGKPLDDQQIASLRNKVVGLYFSAQWCPPCRAFSPVLSEFLKNHKEEFAVVYVSADNTKEQMMDNVRGKGYWVVPFEEALLRQSLSSTHKITGIPTLVVVDGKTGTAFSRSGRTALIKDKVKAWEEWKEGR 184
BLAST of mRNA_S-dermatodea_contig1025.184.1 vs. uniprot
Match: A0A367ZKV4_9BACT (Thioredoxin n=1 Tax=Candidatus Ozemobacter sibiricus TaxID=2268124 RepID=A0A367ZKV4_9BACT) HSP 1 Score: 112 bits (281), Expect = 1.100e-26 Identity = 62/157 (39.49%), Postives = 84/157 (53.50%), Query Frame = 2
Query: 149 PNAAGAGDGVTAGLFPLPRTLRPLEKLEDEKGNEVDPSALQGKMVGVYASAGWCPPCRVFSPKLAEWAKERADDFVVVFVSLDKSEPEMREFAAGKGFLRLPFEPESARHHA-AESFGANMLPTLVIVNGDSGKVVTSWGRSAINKNPKGCLEEWKA 616
P A A + V FP + L D +GN+V+P L GK+VG+Y SA WCPPCR+FSP L + DF VVF+S DK+ E+ G E S +A A+ +G +PTL+I+ G GK +T GR+ + K P CL +WKA
Sbjct: 29 PTPAPAQESVWKTFFP--------DGLLDPEGNKVEPDVLNGKLVGLYFSAHWCPPCRMFSPMLVAFRDAHTSDFEVVFISSDKNREAQFEYMKEVGMKWYTLEHRSEAANALAQKYGVRSIPTLIIL-GPDGKTITEDGRADVTKKPDSCLADWKA 176
BLAST of mRNA_S-dermatodea_contig1025.184.1 vs. uniprot
Match: A0A1Y1XVT0_9FUNG (Thioredoxin-like_fold domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XVT0_9FUNG) HSP 1 Score: 112 bits (281), Expect = 4.430e-26 Identity = 55/142 (38.73%), Postives = 84/142 (59.15%), Query Frame = 2
Query: 227 LEDEKGNEVDPSALQGKMVGVYASAGWC-PPCRVFSPKLAEWAKERADDFVVVFVSLDKSEPEMREFAAGKGFLRLPFEPESARHHAAESFGANMLPTLVIVNGDSGKVVTSWGRSAINKNPKGCLEEWKAGREGVTWLQLV 649
LED +G +V L K+VG Y +A W P +F P+L ++A+E D+F VV +S+DK + + + K FL +P++ E R E + ++PTL + + ++VT+WGR AI KN K CL+ WKAG G++W QL
Sbjct: 70 LEDSQGKKVPVYELADKIVGFYFTAQWVGEPVEIFDPQLVKFAEEHKDEFTVVVISVDKDKETFKAYMKDKPFLAVPYD-EPIRERILEEWAIKLIPTLTVYHPLRHEIVTTWGRGAIMKNGKKCLDAWKAGDSGLSWSQLA 210 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1025.184.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1025.184.1 >prot_S-dermatodea_contig1025.184.1 ID=prot_S-dermatodea_contig1025.184.1|Name=mRNA_S-dermatodea_contig1025.184.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=202bp MASPASDSALLQQKDAPDGVVCDPVTGACRLPNAAGAGDGVTAGLFPLPRback to top mRNA from alignment at S-dermatodea_contig1025:7869..16018- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig1025.184.1 ID=mRNA_S-dermatodea_contig1025.184.1|Name=mRNA_S-dermatodea_contig1025.184.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=8150bp|location=Sequence derived from alignment at S-dermatodea_contig1025:7869..16018- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig1025:7869..16018- >mRNA_S-dermatodea_contig1025.184.1 ID=mRNA_S-dermatodea_contig1025.184.1|Name=mRNA_S-dermatodea_contig1025.184.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1212bp|location=Sequence derived from alignment at S-dermatodea_contig1025:7869..16018- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |