mRNA_S-dermatodea_contig10237.172.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig10237.172.1
Unique NamemRNA_S-dermatodea_contig10237.172.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig10237.172.1 vs. uniprot
Match: D7FUQ0_ECTSI (HMG box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUQ0_ECTSI)

HSP 1 Score: 579 bits (1492), Expect = 1.250e-184
Identity = 366/822 (44.53%), Postives = 467/822 (56.81%), Query Frame = 1
Query:    1 LHHYEKYKPGPKHFDKDRAEEADRDSQRLILSAECQIGKTGAYIQYLTLLSKETKSKLDRIPSPTAMQLEQGGLGSAISWLLPYWFTFTYGDRDAIASTYGRLLASKYTAAVSKERVFYVAQSCKGEGQWLENYVDRLSRPCGEHIISEEGKLRLTKLVLRQGELQAPFDTEGDLLMANAPYVSLKEAINWDNRFDPKLGVILCTCTDGDTCDCQRVVESQEFGKGLTIRMADLAM-GGESGAMDNRWNAPQE-----SAQTGHSPQEVDEFSAKQPTQGPPNDQN-DSSHLLQNYTFEYSRPDQPGFSKTFTLKVSVPKSTPDGEDKLRKPANYPTARWIFTPSYNRYASGPGQALLDRSAALQEPSSDCLADIGHRFHMNVLVVRHEEFEAYRDSFGHQYVLLSMPNRMPYSETVLKRSNPPAGFCFAEGGGIGYARHFIQLWAHANTIPFVWVVDDNVQLCHELDTGTGLFNPCGFTHVMDSLERVMLGTEMSDVAVKSAMNTQGVFRAVSDHASDNDVEQTERNSDPTMRCPRIDAKIKTVAHFCGQADYYGLLGIGRHGIGSHNAKGQGNFATKFGVTHSVYSFFLLNVKSTVSRGAYYPMKKYWEDVEFNHIVDEKRLVVCKFRKFSHCKKNLQPLQTWTLRGSTECPRFEYVR-DIALGAIENEHYTCTTDAGDAADTPSELL-ALHEYLWQEALWFHPFGEIYTTGFDVPLWGGRV-------SVTPEVDISYEESTSRIGDRTTEGAKAVLILLPGGVHSEGFERLQAFVTEKASKNPPESKVWVVMSLPRYASSVDAADAMHVGRWVQELQD 2418
            LH+Y  Y+P  KHFD  R     +D +RLILSAECQIGKTG Y+ YL+ L+  T +    I  P    +E G     +SWLLP+W T        +++ Y  LLASKYT  + +ER+  V QSC    +W + Y   L   CGEH+ S  G   +    LRQ EL  PF+TEGD   A A + SLKEAINWD RF+P LGV  C C    TC     +    +GKGLT+++ADL   GGE G +D RWN PQ+     +A+  H    V +F+AKQP   P N  N ++   L   TF + R  +P    TF+L VS+P  T +       P     +RWIFTPSYNR ASGP QA+LDRS ALQ+       D+G RFH+NVLVVR E+F  YR  FGHQYV+L+MP RMP  E+         G+C AE GGIGYARHFIQ W+    IPFVW++DDNVQ+CHELD  TG +NPCGFTHVMDSLER+++  + +++ V +A       ++VS HA+       +  S      P     + TVA FCG+ D+YG+LGI RHG+G  N K      T FGV HSVYSF LLNV+STV + AYYPMK+YWEDVEFNHIVDEK LVVC FRKFSH KKNLQP     L+G   CP F +   DI L  +E  +       G     P++ L +L +YL       H  G IY      P    RV        V P V    E+ + RI  +T   ++  LI+L GGV ++    L+  +T+K  K   +  V VV  LP+     D +   H+G W+QE  D
Sbjct:  614 LHNYSAYRPAEKHFDHRRGLSERKDPRRLILSAECQIGKTGVYLDYLSKLTNATTASCSEIV-PCPPPVEDGWPREELSWLLPHWRTLI--GIAPMSNEYSTLLASKYTEGIVRERIHLVRQSCCEGNRWRDEYAALLVDSCGEHVRSVIGNQYIE--ALRQRELVPPFNTEGDPTPAPACFESLKEAINWDGRFEPGLGVQFCACESQCTC----AMAGDAYGKGLTLQLADLTRAGGEHGRVDERWNMPQDGDEGPAAKDAH----VRKFAAKQP---PCNWANGEAQGNLSTCTFRHPR--EPESGHTFSLHVSIP--TEEIGVIFFNPKKT-ASRWIFTPSYNRAASGPRQAVLDRSVALQQGCDP--PDVGTRFHINVLVVRWEQFALYRRHFGHQYVVLAMPGRMPCFESE-------GGYCSAEEGGIGYARHFIQQWSSTRDIPFVWMLDDNVQMCHELDVDTGEYNPCGFTHVMDSLERILMLPDSTNIVVNTAQ------QSVSKHAASRTTCPPDLESLRGQTVPGRTMHLTTVAGFCGKPDHYGVLGISRHGLGGENTKPT---TTPFGVNHSVYSFCLLNVRSTVKQRAYYPMKRYWEDVEFNHIVDEKGLVVCMFRKFSHSKKNLQPPH---LQGPLLCPPFAFEHGDIGLDVLEETYEKVRR--GSTMVIPTDYLNSLLKYLS-----CHVLGSIYAEAIAYPSDRRRVILVDTPFEVLPTVP---EQGSPRIELQTVPNSQVFLIMLLGGVKNQSLGLLKHVLTDKLVKQQLKEVV-VVTRLPQR----DGSTGNHIGEWLQEFND 1378          
BLAST of mRNA_S-dermatodea_contig10237.172.1 vs. uniprot
Match: D7G026_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G026_ECTSI)

HSP 1 Score: 474 bits (1219), Expect = 2.120e-147
Identity = 322/808 (39.85%), Postives = 429/808 (53.09%), Query Frame = 1
Query:    1 LHHYEKYKPGPKHFDKDRAEEADRDSQRLILSAECQIGKTGAYIQYLTLLSKETKSKLDRIPSPTAMQLEQGGLGSAISWLLPYWFTFTYGDRDAIASTYGRLLASKYTAAVSKERVFYVAQSCKGEGQWLENYVDRLSRPC-----GEHIISEEGKLRLTKLVLRQGELQAPFDTEGDLLMANAPYVSLKEAINWDNRFDPKLGVILCTCTDGDTCDCQRVVESQE--FGKGLTIRMADLA-MGGESGAMDNRWNAPQESAQTGHS-----PQEV-DEFSAKQPTQG--PPNDQNDSSHLLQNYTFEYSRPDQPGFSKTFTLKVSVPKSTPDGEDKLRKPANYPTARWIFTPSYNRYASGPGQALLDRSAALQEPSSDCLADIGHRFHMNVLVVRHEEFEAYRDSFGHQYVLLSMPNRMPYSETVLKRSNPPAGFCFAEGGGIGYARHFIQLWAHANTIPFVWVVDDNVQLCHELDTGT--GLFNPCGFTHVMDSLERVMLGTEMSDVAVKSAMNTQGVFRAVSDHASDNDV--EQTERNSD----PTMRCPR-IDAKIKTVAHFCGQADYYGLLGIGRHGIGSHNAKGQGNFATKFGVTHSVYSFFLLNVKSTVSRGAYYPMKKYWEDVEFNHIVDEKRLVVCKFRKFSHCKKNLQPLQTWTLRGS-----------TECPRFEYVRDIALGAIENEHY---TCTTDAGDAADTPSELLALHEYLWQEALWFHPFGEI-YTTGF--DVPLWGGRVSVTPEVDISYEESTSRIGDRTTEGAKAVLILLPGGVHSEGFERLQAFVTEK 2298
            LH Y +Y+P   H+D  R + + R+ +RL+LSAECQ+GKTGAY+ YL +L K   S +   P P  +    G    A+SWLLP+W T +  +   ++  YG L A KYTA V+  R + V QSCK +G W+ N+ + L         GE I SEEG+ R+  L   +  L+APFD EG  +   A Y SLK AI+WD RF    GV LC C+   T  CQ  +   +  +G  L+IR ADLA  GG    +  RW A Q+++          P E+ D+F AKQP +     N   +S H      F+Y R D    S    L VS P S   G  +L +     T RWIFTPS+NR+  GP QALLDRS AL +P      D+G R H                 FG  YV++ +P  MP  E+       P+  C  E GGIGY RHFIQ W+ AN IPF+W++DDNVQLCHELD G     + PC FT VM+SLER+M   E   + V +A + +G  R V ++   N V  E   R SD     T + PR +D KI TV   CG+  +YG+LGI RHG G  N K        FGVTHSVYSF LLNV STVS+GA+YPMK++WED+EFNHI+DEK LVVCKFRKFSH KKNLQP+                     CP F++  DI L  ++ ++     C TD        + L  L +YL +  L   P  E+ Y TG    V + G    + P   +       ++       +++++I+L GG+ +E F  L+  + +K
Sbjct:  412 LHDYCRYRPDEGHYDSGRDKTSTRNERRLVLSAECQVGKTGAYLHYLKIL-KRAASPIATPPPPFPIVASSG---DAVSWLLPHWRTLS--NMRTLSDMYGSLFAGKYTAGVANSRAYLVVQSCKRDG-WVTNFQEFLRNVLVHKVQGETIKSEEGRRRIAGL---EQSLEAPFDAEGQAIGTEASYASLKAAIDWDGRFHTNHGVQLCVCSGQCTPACQDSLAKLKVSYGAALSIRTADLAETGGRLDGVIARWEADQDNSXXXXXXXXXXPCELGDDFVAKQPPKAWNKGNGSKESKH-----PFQY-RAD----SALQGLAVSTPHSFKGGIKELLRSKE--TTRWIFTPSFNRFLPGPRQALLDRSQALPKPLDGL--DVGPRTH-----------------FGDHYVIMELPMSMPSDES-------PSSRCSPEEGGIGYTRHFIQRWSQANGIPFIWMLDDNVQLCHELDVGKEEAKYQPCSFTQVMNSLERLMFAEEKKGIRVSTASDKEGTTRDVLEYVKVNGVRDEACPRESDLLRGDTPKQPRAVDQKITTVGDLCGRPGHYGVLGIARHGYGCTNNK---EVKEPFGVTHSVYSFCLLNVASTVSKGAWYPMKRFWEDIEFNHIIDEKGLVVCKFRKFSHSKKNLQPVXXXXXXXXPTSPPARRPLLVSCPEFQH-DDIDLDELQRKYEKGSNCVTDL-------NHLDGLLKYLSEHVLQPIPIEEVCYPTGDLGVVTIDGRSFEIEPAAPVP---GNPQLALEPGHNSRSIVIMLLGGIRNESFGVLKLIIRDK 1157          
BLAST of mRNA_S-dermatodea_contig10237.172.1 vs. uniprot
Match: A0A6H5KZJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZJ2_9PHAE)

HSP 1 Score: 299 bits (766), Expect = 2.010e-85
Identity = 217/596 (36.41%), Postives = 288/596 (48.32%), Query Frame = 1
Query:   70 RDSQRLILSAECQIGKTGAYIQYLTLLSKETKSKLDRIPSPTAMQLEQGGLGSAISWLLPYWFTFTYGDRDAIASTYGRLLASKYTAAVSKERVFYVAQSCKGEGQWLENYVDRLSRPC-----GEHIISEEGKLRLTKLVLRQGELQAPFDTEGDLLMANAPYVSLKEAINWDNRFDPKLGVILCTCTDGDTCDCQRVVESQEFGKGLTIRMADLAMGGESGAMDNRWNAPQESAQTGHSPQEVDEFSAKQPTQGPPNDQNDSSHLLQNYTFEYSRPDQPGFSKTFTLKVSVPKSTPDGEDKLRKPANYPTARWIFTPSYNRYASGPGQALLDRSAALQEPSSDCLADIG----HRFHMNVLVVRHEE------FEAYRDSFGHQYVLLSMPNRMPYSETVLKRSNPPAGFCFAEGGGIGYARHFIQLWAHANTIPFVWVVDDNVQLCHELDTGT--GLFNPCGFTHVMDSLERVMLGTEMSDVAVKSAMNTQGVFRAVSDHASDNDV--EQTERNSD----PTMRCPR-IDAKIKTVAHFCGQADYYGLLGIGRHGIGSHNAKGQGNFATKFGVTHSVYSFFLLNVKSTVSRGA 1785
            R+ +RL+LSAECQ+GKTGAY+ YL +L K   S +   P P  +    G +   +SWLLP+W   +  +   ++  YG L A KYTA V+  R + V QSCK + +W+ N+ + L         GE I +E G+ R+  L  R   L+APFD E   +   A Y SLK AI+W  RF    GV LC                      +T+  + L   G  G    +   P                                        F+Y R D    S    L VS P S   G  +L +     T RW+FTPS+NR+  GP QALLDRS AL +P      D+G    H   + V V R         F++    FG  YV + +P  MP  E+       P+  C  + GGIGY RHFI+ W+ AN +PF W++DDNVQLCHELD G       PC FT VM+SLER+ L  + + + V +A + +G  R V ++   + V  E   R SD     T + PR +  KI TV   CG   ++G+LGI RHG G  N K        FGVTHSVYSF+LLNV STVS+GA
Sbjct:  278 RNERRLVLSAECQVGKTGAYLHYLKIL-KRAASPIATPPPPFPIFASSGDV---VSWLLPHWRMLS--NTRPLSEMYGSLFAGKYTAGVANSRAYLVVQSCKRD-RWVTNFQEFLRNVLAHKVQGETIKNEAGRRRIAGLEPR---LEAPFDAEARAIGTEASYASLKAAIDWVGRFHTNHGVQLCE---------------------MTLWRSSLRRPGTKGMAARKSKHP----------------------------------------FQY-RAD----SALQGLAVSTPHSLKGGIKELLRSKE--TTRWVFTPSFNRFLPGPRQALLDRSEALPKPLGGL--DVGPRQEHDRDVMVWVNRAHNRCSRSMFKSSWTHFGDHYVTMELPMSMPSDES-------PSSRCSPKEGGIGYTRHFIRRWSQANELPFAWMLDDNVQLCHELDVGKEQAKCQPCSFTQVMNSLERLKLAEDKNGIRVSTASDKEGSTRDVLEYVKVDGVRGEACPRESDLLGGDTPKQPRAVGQKITTVGDLCGHPGHFGVLGIARHGYGCTNNK---EVRESFGVTHSVYSFYLLNVASTVSKGA 783          
BLAST of mRNA_S-dermatodea_contig10237.172.1 vs. uniprot
Match: A0A836CLD4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLD4_9STRA)

HSP 1 Score: 267 bits (683), Expect = 8.710e-73
Identity = 223/709 (31.45%), Postives = 322/709 (45.42%), Query Frame = 1
Query:    1 LHHYEKYKPGPKHFDKDRAEEAD--RDSQRLILSAECQIGKTGAYIQYLTLLSKETKSKLDRIPSPTAMQLEQGGLGSAIS----WLLPYWFTFTYGDRDAIASTYGRLLASKYTAAVSKERVFY----VAQSCKGEGQWLENYVDRLSRPCGEHIISEEGKLRLTKLVLRQGELQAPF--DTEGDLLMANAPYVSLKEAINWDNRFDPKLGVILCTCTDGDTCDCQRVVESQEFGKGLTIRMADLAMGGESGAMDNRWNAPQESAQTGHSPQEVDEFSAKQPTQGPPNDQNDSSHLLQNYTFEYSRPDQPGFSKTFTLKVSVPKSTPDG-EDKLRKPANYPTARWIFTPSYNRYASGPGQALLDRSAA-----LQEPSSDCLADIGHRFHMNVLVVRHEEFEAYRDSFGHQYVLLSMPNRMP---------YSETVLKRSNPPAGFCFAEGGGIGYARHFIQLWAHANTIPFVWVVDDNVQLCHELDT-------GTGLFNPCGFTHVMDSLERVMLGTEMSDVAVKSAMN--TQGVFRAVSDHASDNDVEQTERNSDPTMRCPR---------------IDAKIKTVAHFCGQADYYGLLGIGRHGIGSHNAKGQGNFATKFGVTHSVYSFFLLNVKSTVSRGAYYPMKKYWEDVEFNHIVDEKRLVVCKFRKFSHCKKNLQPLQTWTLRGSTECPRFEYVRDIALG 1974
            LH Y+ ++    H+D +R   +   RD  RL+LSAECQIGKTGAY++Y+ LL    +S    I  P         + S ++    WLLP W +       A++++Y RL   KYT  V+  R+ +    V +       WL+ Y + L    GE I++  G+  ++   LR  +++ P   D  G   +       L + ++WD R D + G    +   G+      V+    +  G   R  +     E    D+ W A          P++    S  QP              L+ + F          +   T ++  P    D  +D L++P     ARW+FTPSYNR   GP QALLDR AA     L  P    ++    +  + VLVVR E+F+AY   FG  Y ++ MP+ MP          S   L  SN       A  GG GY+R FIQL A+A  +  VW++DDN+Q C E+D        G        F HVMD LE ++ G   + V   SA    T     A++  AS           + T  CP                +   + TV    G    YG++G  R      + K      T F VTHSVYSFFLLN+++TV RGA++P+K + ED+EFN ++DEK LV CK R+F H KKNLQPL+    R S + P+   V+ +A+G
Sbjct:  294 LHEYQNFRATSSHYDHNRHSSSGCARDPLRLMLSAECQIGKTGAYLRYIQLLRDRLESNSRGITLPIV------DIASTLAVPQMWLLPSWESLQ--KFPALSTSYSRLCIGKYTMDVATRRLAHLKRLVVEHTDAGSAWLDAYTEWLLSAQGECIVTRVGQAMIS--TLRNSDIRCPLVVDAAGCSDIRQGHQQDLVKVLDWDGRLDQEDGG---SYWPGNGAAASEVLRLSSY-IGALFRKVNAGNMLEV-LQDHAWCAQ---------PEQRPVQSGTQP----------GVEALKMHPFAAVARSIRAVTAAPTTEMGAPLPVSDSNDDVLKQPV---CARWVFTPSYNRATPGPRQALLDRRAAYGPAGLPPPPHGGVS----KLLVQVLVVRREQFDAYVKHFGSTYFVIGMPSSMPAEVCDFINSMSAFTLYDSNTDTEALQAATGGPGYSRLFIQLLAYAAGLRHVWLMDDNIQYCSEIDLFSLAGKPGQRQLQSTSFQHVMDELELLLTGAGSTTVQTPSAAGATTDVAISALAQKAS----------PEVTKACPPPPYMLRPGPAPARHDVCGPVTTVEQLSGYHGQYGIIGFQR------DTKQMRKLTTPFAVTHSVYSFFLLNIEATVKRGAFFPVKTHAEDIEFNFLLDEKGLVACKSRRFFHTKKNLQPLR----RASVQPPQ-PVVQPLAVG 940          
BLAST of mRNA_S-dermatodea_contig10237.172.1 vs. uniprot
Match: A0A2R5GW98_9STRA (GREB1-like protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GW98_9STRA)

HSP 1 Score: 195 bits (495), Expect = 6.010e-48
Identity = 190/651 (29.19%), Postives = 292/651 (44.85%), Query Frame = 1
Query:   73 DSQRLILSAECQIGKTGAYIQYLTLLSKETKSKLDRIPSPTAMQLEQGGLGSAISWLLPYWFTFTYGDRDAIASTYGRLLASKYTAAVSKERVFYVAQSCKGEGQWLENYVDRLSRPCGEHIISEEGKLRLTKLVLRQG-ELQAPFDTEGDLLMANAPYVSLKEAINWDNRFDPKLGVILC-TCTDGDTCDCQRVVE--SQEFGKGL--TIRMADLAM-------GGESGAMD-------NRW-------NAPQESAQTGHSPQEVDEFSAKQPTQGPPNDQNDSSHLLQNYTFEY-------SRPDQPGFSKTFTLKVSVPKSTPDGEDKLRKPANYPTARWIFTPSYNRYASGPGQALLDRSAALQEPSSDCLADIGHRFHMNVLVVRHEEFEAYRDSFGHQYVLLSMPNRMPYSETVLKRSNPPAGFCFAEGGGIGYARHFIQLWAHANTIPFVWVVDDNVQLCHE--------LDTGTGLFNPCGFTHVMDSLERVMLGTEMSDVAVKSAMNTQGVFRAVSDHASDNDVEQTERNSDPTMRCPRIDAKIKTVAHFCGQADYYGLLGIGRHGIGSHNAKGQGNFATKFGVTHSVYSFFLLNVKSTVSRGAYYPMKKYWEDVEFNHIVDEKRLVVCKFRKFSHCKKNLQ 1899
            D +RL+L A+CQ GKTG Y+ +L LL +  +     IP+P     +   L     W LP+W       +  ++  Y RL  S+Y  ++ ++R   +  + +    W E Y+D L    GE +  + GK ++ +L  +   E  APF+        N+    +   +N+D RF  K G  L  +    DT   + +++  ++E G  L   +R+A   +       G   G+MD       +R+       NA +  A    SP+   ++  KQ          +   L   Y   +       +R  Q    K   L V +P      E  +    N  TARW+F PSYNR     G AL+D   A+ E  S      G    + ++V   ++F+ Y  ++G  +++LS+P  M    +   R N       A+ GGIGYAR FIQL AH   +P+VW++DDNV +C+E         D  +   N C F+ VM  +ER++      D  +  A   + + +       +++     R S P       +A  K      G +D YGL+GI R                 F VT+SVYSF  LNV STV+ G ++P+K + EDVEFNH+VDE  LV  K  +F H KKNL+
Sbjct:  427 DPRRLLLMAQCQQGKTGTYLHFLRLLKERVELA---IPTPP----DALPLVPRAEWTLPHWRNLIVSAQPPLSKFYNRLQTSQYDTSILQQRTLVLMLASESRSGWKEAYLDYLLDEDGEAVQCKAGKDKVKELRQKLAQEHTAPFNGSR---CTNSRLAFV--CVNFDGRFSSKEGDDLAKSFLQNDTAQLRDILDKHAKETGTSLGHRVRVAREHVQRQLWDAGSRRGSMDQPQHGGADRFTKSMKAANAYESVAARSISPEFDGKYHRKQYVVKDVKLVGEGVCLSAPYAGFHDLNLKADARNVQINVGKRKLLNVKLPAK----EHDMGTVDNATTARWVFVPSYNR----AGVALVDYEKAIPEDES------GKPTVVCIVVRSGKQFDDYVAAYGSAHIILSLPESMASKSSEGSRVN-------ADRGGIGYARLFIQLAAHQLGLPWVWILDDNVDVCYERKLEEKVPADALSARPNACTFSTVMTGVERIV---HNGDEKLTEAHQQKRMKKW------EHEKPMLLRGS-PAPEASSENASTKK--ELTGGSDQYGLIGIRRDPRACPTESKH-----PFMVTYSVYSFIYLNVTSTVNAGVFFPVKTFGEDVEFNHLVDEAGLVCLKVNRFFHHKKNLK 1027          
BLAST of mRNA_S-dermatodea_contig10237.172.1 vs. uniprot
Match: A0A2R5GIV1_9STRA (GREB1-like protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GIV1_9STRA)

HSP 1 Score: 188 bits (477), Expect = 2.390e-45
Identity = 180/671 (26.83%), Postives = 282/671 (42.03%), Query Frame = 1
Query:   70 RDSQRLILSAECQIGKTGAYIQYLTLLSKETKSKLDRIPSPTAMQLEQGGLGSAISWLLPYWFTFTYGDRDAIASTYGRLLASKYTAAVSKERVFYVAQSCKGEGQWLENYVDRLSRPCGEHIISEEGKLRLTKLVLRQGELQAPFDTEGDLLMANAPYVSLKEAINWDNRFD----------------PKLGVILCTCTDGDTCDCQRVVESQEFGKGLTIRMADL-AMGGESGAMDNR---------------WNAPQESAQTGHSPQEVDEFSAKQPTQGPPNDQNDSSHLLQNYTF---------EYS-------RPDQPGFSKTFTLKVSVPKSTPDGEDK----LRKPANYPTARWIFTPSYNRYASGPGQALLDRSAALQEPSSDCLADIGHRFHMNVLVVRHEEFEAYRDSFGHQYVLLSMPNRMPYSETVLKRSNPPAGFCFAEGGGIGYARHFIQLWAHANTIPFVWVVDDNVQLCHE---LDTGTGLFN------PCGFTHVMDSLERVMLGTEMSDVAVKSAMNTQGVFRAVSDHASDNDVEQTERNSDPTMRCPRIDAKIKTVAHFCGQADYYGLLGIGRHGIGSHNAKGQGNFATKFGVTHSVYSFFLLNVKSTVSRGAYYPMKKYWEDVEFNHIVDEKRLVVCKFRKFSHCKKNLQ 1899
            +D +RL+L A+CQ GKTG Y+ ++ LL    +  +   P P      +        W LPYW          +   Y +    +Y   V ++R+  +  +C+   +WL+NY + L    GE I SE G  ++ KL     +    FD   +    + P +++   +N+D RF                  KL   L       T   + +   Q F + L    A + +M  ++GA                     +      T ++P      +A+  T    N  N   H++ + +F          YS       R D  G     +   S P+++    D     +RK     + RW F PSYNR     G ALLD   A+ +   D L  +     + ++V   ++F+ Y  ++G  +++L +P++MP  +        P  F FA+ GGIG+AR FIQL A    + +VW++DDNV +C+E   +D    L        PC F  VM  +E ++        + +     + + R                   P  R     A+      F G A+ YGL+GI R          Q      F +++SVYSF  LNVKSTV +G ++P+K +WEDVEFNH+VDE  LV  K  +F H KKNL+
Sbjct: 3427 QDPRRLLLMAQCQQGKTGTYLHFIRLLKDVIELDVPMAPPPMVPVPRK-------LWTLPYWGNLVVSKFPQLRVQYDKPNKGQYHPTVMQQRILALMLACEQGQRWLKNYKNYLRAEDGEAIQSEAGLAKIRKL-----DPNPAFDKPFENSRCSRPDIAIA-CVNFDGRFSGEWEDKVAEQLQDENVSKLSSALAENNTQPTPPLEGISVMQRFVQHLRAAKAFVQSMLWDAGARGQHPIQVGVRVRSHPMLVTRSKHTQMHTAYAP-----VAARPVTPQFDNVYNAKQHVMTDLSFIGEGACLSVPYSGFCGLAVRADVNGAEVFMSADDSSPETSLLNVDTTTRTVRKSHGTHSVRWAFIPSYNR----AGVALLDYDRAIPK-DGDSLRTV-----VCIVVRSGKQFDDYVAAYGSAHLVLGLPSKMPSKKR-------PGEFVFADRGGIGFARLFIQLAASQLKLNWVWILDDNVDVCYERTLVDDSVPLQTLRQGPAPCTFATVMKGVEAIVQKRSEQFHSRRMHEWPRALVRGK-----------------PAPRAAAT-ARATNTDQFIGGAENYGLIGIRRDAQAR-----QTESEHPFMISYSVYSFIYLNVKSTVKKGVFFPVKTFWEDVEFNHLVDEAGLVCLKVNRFFHHKKNLK 4039          
BLAST of mRNA_S-dermatodea_contig10237.172.1 vs. uniprot
Match: A0A2R5GR40_9STRA (GREB1-like protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GR40_9STRA)

HSP 1 Score: 187 bits (475), Expect = 3.770e-45
Identity = 199/686 (29.01%), Postives = 297/686 (43.29%), Query Frame = 1
Query:   49 DRAEEADRDSQRLILSAECQIGKTGAYIQYLTLLSKETKSKLDRIPSPTAMQLEQGGLGSAISWLLPYWFTFTYGDRD----AIASTYGRLLASKYTAAVSKERVFYVAQSCKGEGQWLENYVDRLSRPCGEHIISEEGKLRLTKLVLRQGELQAPFDTEG------------DLLMANAPYVSLKEAINWDNR-FDPKLGVILCTCTDGDTCDC---QRVVESQEFGKGLTIRMADLAMGGESGAMDNRWNAPQESAQTGHSPQE--VDEFSAKQPTQGPPNDQNDSSHLLQNYTF-----EYSRPDQPGF-------------------SKTFTL-KVS-VPKSTPDGE-------DKLRKPANYPT--ARWIFTPSYNRYASGPGQALLDRSAALQEPSSDCLADIGHRFHMNVLVVRHEEFEAYRDSFGHQYVLLSMPNRMPYSETVLKRSNPPAGFCFAEGGGIGYARHFIQLWAHANTIPFVWVVDDNVQLCHEL--------DTGTGLFNPCGFTHVMDSLERVMLGTEMSDVAVKSAMNTQGVFRAVSDHASDNDVEQTERNSDPTMR---CPRIDA-KIKTVAHFCGQADYYGLLGIGRHGIGSHNAKGQGNFATKFGVTHSVYSFFLLNVKSTVSRGAYYPMKKYWEDVEFNHIVDEKRLVVCKFRKFSHCKKNLQ 1899
            D A++ ++D +RL+L A+CQ GKTG Y+ ++ LL    +  +   P P           +  SW LPYW     G R     ++ + Y +    +Y  AV ++R+  +A + +    WL+ Y+ +L     E I S+ GK  L  L    G+ +AP  T+             D   +N+ + +  + I WD R     L   L   + G + D    QR+  +Q +   +  R+ D    G      N  +       T  +PQ+      +AK  ++          H + N          S P   GF                   SK   L  VS VPK             + LR  A       RW+F PSYNR     G ALL+   A+ EP  D   + G R  + ++V   ++F+ Y  ++G  +++L +P +MP      K       F  AE GGIGYAR FIQL A    +P+VW++DDNV +C+E         +      +PC F  VM  +E ++              N +   +   D        Q  R+  P++R    P +    +++     G A  YGL+GI R       A+ +   A  F VT+SVYSF LLNV STV  G Y+P+K +WEDVEFNH+VDE  LV  K  +F H KKNL+
Sbjct: 1325 DWAQDGEKDPRRLLLVAQCQQGKTGTYLHFIKLLKDHIEVAIPAPPKPLPPV-------ARASWSLPYWRNLIIGSRPLGFPSMRNDYDKPKTGQYHEAVMRQRLLLLALAGEQGESWLDFYIMKLLVEDCEAIQSKAGKEVLKHLEKFIGKKEAPITTDHTDTELAFRCVNFDDRFSNSEWKTSFQEI-WDGREAKAMLFSALRKSSLGQSQDASVSQRLRAAQAY---VQNRLWDAGARGRDRKALNSISRENMERVTFSTPQQRAYSRVAAKSISRNFDEKYCQKQHEVHNIELVAEGVSLSAP-YSGFQGLSVFADADSVQVYLDAKSKRVPLFDVSHVPKPASKXXXXXXXXXETLRMSAREEAKDVRWVFVPSYNR----AGVALLNYEKAIPEP--DEKNNQGKRTVVCIVVRSGQQFKDYVANYGSAHLVLGLPPKMPSKMDRTK-------FVTAEQGGIGYARLFIQLAASELGLPWVWILDDNVDVCYERRLMDDVPSNPPKAPPDPCTFVTVMTGVEHIV-------------QNEEETIQLTGDEKQ----MQVRRSKRPSIRRRPAPEVSTLPVRSKGELTGGAGQYGLIGIRRDA----QARLKDPKAP-FLVTYSVYSFILLNVDSTVRAGVYFPVKTFWEDVEFNHLVDEAGLVCLKVNRFYHHKKNLK 1963          
BLAST of mRNA_S-dermatodea_contig10237.172.1 vs. uniprot
Match: A0A2R5H028_9STRA (GREB1-like protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5H028_9STRA)

HSP 1 Score: 182 bits (462), Expect = 1.390e-43
Identity = 185/663 (27.90%), Postives = 287/663 (43.29%), Query Frame = 1
Query:   79 QRLILSAECQIGKTGAYIQYLTLLSKETKSKLDRIPSPTAMQLEQGGLGSAISWLLPYWFTFTYGDRD----AIASTYGRLLASKYTAAVSKERVFYVAQSCKGEGQWLENYVDRLSRPCGEHIISEEGKLRLTKLVLRQGELQAPFD----TEGDLLMANAPYVSLKEAINWDNRFDPKLGVILCTC---TDGDTCDCQRVVESQEFGKGLT----IRMADLAM-------GGESGAMDNRWNAPQES-AQTGHSPQEVDEFSAKQPTQGPPNDQNDSSHLLQNYTFEYSRPDQ--------PGF--------SKTFTLKVSVPKS---TPDGEDK--LRKPANYPTARWIFTPSYNRYASGPGQALLDRSAALQEPSSDCLADIGHRFHMNVLVVRHEEFEAYRDSFGHQYVLLSMPNRMPYSETVLKRSNPPAGFCFAEGGGIGYARHFIQLWAHANTIPFVWVVDDNVQLCHELDTGTGLF--------NPCGFTHVMDSLERVMLGTEMSDVAVKSAMNTQGVFRAVSDHASDNDVEQTERNSDPTMR---CPRI-DAKIKTVAHFCGQADYYGLLGIGRHGIGSHNAKGQGNFATKFGVTHSVYSFFLLNVKSTVSRGAYYPMKKYWEDVEFNHIVDEKRLVVCKFRKFSHCKKNLQ 1899
            +RL+L A+CQ GKTG Y+ +L LL +  +     IP+P     +   L     W LP+W       +     A+ S+Y      +Y A+V ++R   +  + +    W E Y   L    GE I+S  G  ++  L     EL APFD    T   L +         + +N+D RF    G  L      +  +T   + +++      G +    +R+A   +       G   G MD   +   +S  Q+  +    +  +A+    G      D  H  Q    +    D+         GF         +   +KV   K    +P  E +  +R   +  + RW+F PSYNR     G AL+D   A+         D G    + ++V   ++F+ Y  ++G  +++LS+P  M  +   L+ S       FAE GGIGYAR F+QL AH   +P+VW++DDNV +C+E      +         + C F+ VM  +E ++      D  +  A N + + +   D               P +R    P + +   +T       AD YGL+GI R       A+ Q      F VT+SVYSF  LNV STV+   ++P+K +WEDVEFNH+VDE  LV  K  +F H KKNL+
Sbjct: 1307 RRLLLMAQCQQGKTGTYLHFLRLLKERVEIA---IPTPP----DALPLVPRAEWTLPHWRNLIVSAQSPGFPALRSSYAMPKKGQYHASVLQQRTLALMLASENGSGWYEAYCGYLFGEDGEAIVSRAGLDKIEVLSRTVEELGAPFDGSRCTNSQLAL---------DCVNFDGRFSSAEGDALAKSFLESKHNTAQLRDILDKHAKNSGTSLGHRVRIAREHVQRQLWDAGSRRGRMDQPKDGGADSFTQSETAANAYESVAARSTLSG----FTDKHHRKQYMVKDVKLVDEGVCLSVPYAGFHGLNLEEDGRNMRIKVGEHKLLNVSPSSETRHTMRTLDDATSVRWVFVPSYNR----AGVALVDYEKAIPRD------DRGKPTIVCIVVRSGKQFDDYVAAYGSAHIILSLPASM--ASKTLEGSR-----VFAERGGIGYARLFVQLAAHQLGLPWVWILDDNVDVCYERKLADKVPANALSAHPDACTFSTVMIGVESIV---HNEDEELAEAHNQKRLEKWKPDG--------------PVLRKRPAPELSNENARTKEELTAGADQYGLIGIRR----DPRAR-QTESEHPFMVTYSVYSFIYLNVTSTVNAEVFFPVKTFWEDVEFNHLVDEAGLVCLKVNRFFHHKKNLK 1910          
BLAST of mRNA_S-dermatodea_contig10237.172.1 vs. uniprot
Match: A0A7S0M4U5_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M4U5_9CRYP)

HSP 1 Score: 174 bits (440), Expect = 5.330e-42
Identity = 189/683 (27.67%), Postives = 291/683 (42.61%), Query Frame = 1
Query:   82 RLILSAECQIGKTGAYIQYLTLLSKETKSKLDRIPSPTAMQLEQGGLGSA------ISWLLPYWFTFTYGDRDAIASTYG---RLLASKYTAAVSKERV---FYVAQSCK--GEGQWLENYVDRL-SRPCGEHIISEEGKLRLTKLVLRQGELQAPFDTEGDLLMANAPYVSLKEAINWDNR-FDPKLG----VILCTCTDGDTCD-CQRVVESQEFGKGLTIRMADLAMGGESGAMDNRWNAPQES----AQTGHSPQEVDEFSAKQPTQGPPNDQNDSSHLLQNYTFEYSRPD--------QPGFSKTFTLKVSVPKSTPD--------GEDKLRKPANYPTAR-----WIFTPSYNRYASGPGQALLDRSAALQEPSSDCLADIGHRFHMNV---LVVRHE---------EFEAYRDSFGHQYVLLSMPNRMPYSETV-LKRSNP--PAGFCFAEG-GGIGYARHFIQLWAHANTIPFVWVVDDNVQLCHELDTG--------TGLFNPCGFTHVMDSLERVMLGTEMSDVAVKSAMNTQGVFRAVSDHASDNDVEQTE--RNSDPTMRCPRI-----------------DAKIKTVAHFCGQADYYGLLGIGRHGIGSHNAKGQGNFATKFGVTHSVYSFFLLNVKSTVSRGAYYPMKKYWEDVEFNHIVDEKRLVVCK 1863
            RL+L AECQIGKTGAY  +L LL ++ + + + I    +  +     G        + W LPYW       +D    T     R+LA KY   + ++R+    +V  S K  G+  WL  Y   +  R C   + SE  +  +  L      +Q P +   +         +L+  I+WD R    K G    V     +D D    C   +  +        ++ +     +       W +P  +    AQT      + E       Q     +  S  + + +  ++            +  F  T  +K+SVPKS  D        G  K+    +   ++     W+FT S+NR++    QALLDR +A        L++ G R  ++V   LVVR +         EFE+Y   +   Y+++ MP +M     +   +SN     GF F+    GIGYAR F Q++AHA  +  VW+VDDNVQ C+ L+              +PC F HVM S+E  +   + + V+    ++T  +F      + +N  E       SD   +CP +                 D  + T   F G  + + ++G GR  + S     Q  +   F VTHSVYSFFLLNV +TV +GA YP K +WED+EFN I +E+ L V K
Sbjct:   11 RLLLFAECQIGKTGAYCWFLNLLREKLQGQ-NLIHPCYSFPIISDNCGPIKTETHILQWALPYW-------KDISRKTQPWPMRILAGKYHKRIRRQRLACLLHVVNSDKSTGKNDWLRLYCQEIIQREC---VQSERWQKDIADL--ESCTMQCPLELLDENTCRIIDIKALQSLIDWDRRGSSAKHGDLNSVFWAGVSDQDADPLCFEGLLQKTDNDQNQYKIVNYLNVDKHSVQTVAWGSPTSNSILEAQTEIRAPNLVERQIMATVQHERRAREGSEAISKLHYLDFKSAAVSLDENTLRDLFPDTEHIKISVPKSLQDCFQYTEGAGIIKVNSKGHIKNSKISIQSWVFTSSFNRHSEAQKQALLDRKSAYT-----LLSETGTREQISVAQVLVVRSDSEANENEMKEFESYCRDYCADYIIIEMPLKMNLKNFIPASKSNQFLKTGFEFSSKCSGIGYARLFTQVFAHALGLHHVWMVDDNVQTCYGLNLSLCDEKVVIVEKPSPCSFAHVMISIESYVGSEKNASVSDDDDLDTVRIF------SGENGAEMLNVASASDQFYKCPLVSQGSAYHARLIEGVGPLDLGVCTRKEFSGTINSFAVIGTGRD-VASFQ---QDPYKYPFKVTHSVYSFFLLNVSATVEKGALYPPKPFWEDIEFNQICEERGLAVIK 665          
BLAST of mRNA_S-dermatodea_contig10237.172.1 vs. uniprot
Match: R1D1D9_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D1D9_EMIHU)

HSP 1 Score: 163 bits (413), Expect = 1.600e-37
Identity = 180/671 (26.83%), Postives = 280/671 (41.73%), Query Frame = 1
Query:   31 PKHFDKDRAEEADRDSQRLILSAECQIGKTGAYIQYLTLLSKETKSKLDRIPSPTAMQLEQGGLGSAISWLLPYWFTFTYGDRDAIASTYGRLLASKYTAAVSKERVFYVAQSCKGEGQWLENYVDRLSRPCGEHIISEEG-----KLRLTKLVLRQGEL-QAPFDTEGDLLMAN-APYVSLKEAINWDNRFDP--KLGVILCTCTDGDTCDCQRVVESQEFGKGLTIRMADLAMGGESGAMDNRWNAPQESAQTGHSPQEVDEFSAKQPTQGPPNDQNDSSHLLQNYTFEYSRPDQPGFSKTFTLKVSVPKSTPDGEDKLRKPANYPTARWIFTPSYNRYASGPGQALLDRSAALQEPSSDC-LADIGHRFHMNVLVVRHEE--------FEAYRDSFGHQYVLLSMPNRMPYSETVLKRSNPPAGFCFAEGGGIGYARHFIQLWAHANTIPFVWVVDDNVQLCHELDT------------GTGLFNPCGFTHVMDSLERVMLGTEMSDVAVKSAMNTQGVFRAVSDHASDNDVEQTERNSDPTMRC-----------------PRID-AKIKTVAHFCGQADYYGLLGIGRHGIGSHNAKGQGNFATKFGVTHSVYSFFLLNVKSTVSRGAYYPMKKYWEDVEFNHIVDEKRLVVCKFRKFSHCKKNLQ 1899
            P H+D    +E    ++RL+L AECQIGKTGAY+ +LT L++E +     +PS   + + + G+    SW  PYW               G    +     +SK +   VA        W + Y D L  P GE I+S++G     +LR+ KL L  G   Q P DT    +  +     +++  ++WD R     +L                 + +     +G    +A   +    GA+  +  APQ       S   VD     +   G        + LL+ +T    R   PG+ K                D  R        RW+FT SY     G  Q +  R       + DC +A +    ++ VL++R  +        F+ Y   +G  Y++  MP+ M   +       PP      E G IGYAR   QL A+   +  +W++DDNV+ C  +D             G      CGF  VM  +E ++   +  +V  +  +    V  A ++H + +   +TER   P  R                    +D A + ++  + G    YG+LG+ R    +   + +G  AT     HSVYSFFLLNV++T+ +G  YP K  WEDVEF H+VDE  L +CKF ++ H K++L+
Sbjct: 1409 PPHYD--AVDEPQTHAKRLLLFAECQIGKTGAYLHFLTRLTEEVRGS--NLPS---VFMSKKGIDQRWSWFFPYWENIGRQRLKYEEPKEGHYYQAVAKGRMSKLQELAVAPPPAPLRTWADEYCDWLLSPSGECIVSKKGCAAVEELRV-KLKLADGTAKQMPVDTATRAVRDDEGAREAVRLCVDWDGRMARLRQLHKDFSALRQPGLNPAALIWDKPPTHRGAARVIAKPNVVPAGGAVRAQHAAPQRKPGDDRSSDVVDVAVGAKRFGG-------GAELLEPFT---CRLHVPGWMKNRLWT-----------DAQRVNIAGLAVRWMFTCSY-----GGAQKVTVRL------NRDCAMAPLKREQYVQVLMLRPRDASPADRAAFDEYLRCWGSMYIIAEMPSTM---QVRYAHDAPPLQLQ-VEVGRIGYARLVCQLLANELGLDEIWMLDDNVERCWAIDIDPDSVAPRTGVDGVVKLRECGFATVMQGMELLLDRGDKDNVDEQLPL----VSAAATEHITFD--AETERGKSPPRRALANSGSAPLVIRGGGGPAAVDPAPLGSLRQYSGDKLAYGILGMQRDDPRNRLRQRRGFLAT-----HSVYSFFLLNVRATLDKGVLYPAKAIWEDVEFLHMVDEAGLAICKFSRYIHKKRHLR 2024          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10237.172.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D7FUQ0_ECTSI1.250e-18444.53HMG box domain-containing protein n=1 Tax=Ectocarp... [more]
D7G026_ECTSI2.120e-14739.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KZJ2_9PHAE2.010e-8536.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CLD4_9STRA8.710e-7331.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2R5GW98_9STRA6.010e-4829.19GREB1-like protein n=1 Tax=Hondaea fermentalgiana ... [more]
A0A2R5GIV1_9STRA2.390e-4526.83GREB1-like protein n=1 Tax=Hondaea fermentalgiana ... [more]
A0A2R5GR40_9STRA3.770e-4529.01GREB1-like protein n=1 Tax=Hondaea fermentalgiana ... [more]
A0A2R5H028_9STRA1.390e-4327.90GREB1-like protein n=1 Tax=Hondaea fermentalgiana ... [more]
A0A7S0M4U5_9CRYP5.330e-4227.67Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
R1D1D9_EMIHU1.600e-3726.83Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10237contigS-dermatodea_contig10237:3167..6990 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Ec32 ortholog descriptionGREB1 and High mobility group domain protein
Ec32 orthologEc-03_001500.1
Hectar predicted targeting categoryother localisation
Exons7
Model size2424
Cds size2424
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924146.919081-CDS-S-dermatodea_contig10237:3166..32671622924146.919081-CDS-S-dermatodea_contig10237:3166..3267Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10237 3167..3267 -
1694079049.7465281-CDS-S-dermatodea_contig10237:3166..32671694079049.7465281-CDS-S-dermatodea_contig10237:3166..3267Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10237 3167..3267 -
1622924146.9337204-CDS-S-dermatodea_contig10237:3435..41611622924146.9337204-CDS-S-dermatodea_contig10237:3435..4161Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10237 3436..4161 -
1694079049.7566884-CDS-S-dermatodea_contig10237:3435..41611694079049.7566884-CDS-S-dermatodea_contig10237:3435..4161Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10237 3436..4161 -
1622924146.9461317-CDS-S-dermatodea_contig10237:4221..45901622924146.9461317-CDS-S-dermatodea_contig10237:4221..4590Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10237 4222..4590 -
1694079049.7663133-CDS-S-dermatodea_contig10237:4221..45901694079049.7663133-CDS-S-dermatodea_contig10237:4221..4590Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10237 4222..4590 -
1622924146.960931-CDS-S-dermatodea_contig10237:4952..50171622924146.960931-CDS-S-dermatodea_contig10237:4952..5017Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10237 4953..5017 -
1694079049.7738688-CDS-S-dermatodea_contig10237:4952..50171694079049.7738688-CDS-S-dermatodea_contig10237:4952..5017Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10237 4953..5017 -
1622924146.9729636-CDS-S-dermatodea_contig10237:5198..52491622924146.9729636-CDS-S-dermatodea_contig10237:5198..5249Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10237 5199..5249 -
1694079049.781629-CDS-S-dermatodea_contig10237:5198..52491694079049.781629-CDS-S-dermatodea_contig10237:5198..5249Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10237 5199..5249 -
1622924146.9841208-CDS-S-dermatodea_contig10237:5641..59871622924146.9841208-CDS-S-dermatodea_contig10237:5641..5987Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10237 5642..5987 -
1694079049.7913454-CDS-S-dermatodea_contig10237:5641..59871694079049.7913454-CDS-S-dermatodea_contig10237:5641..5987Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10237 5642..5987 -
1622924146.997638-CDS-S-dermatodea_contig10237:6224..69901622924146.997638-CDS-S-dermatodea_contig10237:6224..6990Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10237 6225..6990 -
1694079049.8072996-CDS-S-dermatodea_contig10237:6224..69901694079049.8072996-CDS-S-dermatodea_contig10237:6224..6990Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10237 6225..6990 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10237.172.1prot_S-dermatodea_contig10237.172.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig10237 3167..6990 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig10237.172.1

>prot_S-dermatodea_contig10237.172.1 ID=prot_S-dermatodea_contig10237.172.1|Name=mRNA_S-dermatodea_contig10237.172.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=808bp
LHHYEKYKPGPKHFDKDRAEEADRDSQRLILSAECQIGKTGAYIQYLTLL
SKETKSKLDRIPSPTAMQLEQGGLGSAISWLLPYWFTFTYGDRDAIASTY
GRLLASKYTAAVSKERVFYVAQSCKGEGQWLENYVDRLSRPCGEHIISEE
GKLRLTKLVLRQGELQAPFDTEGDLLMANAPYVSLKEAINWDNRFDPKLG
VILCTCTDGDTCDCQRVVESQEFGKGLTIRMADLAMGGESGAMDNRWNAP
QESAQTGHSPQEVDEFSAKQPTQGPPNDQNDSSHLLQNYTFEYSRPDQPG
FSKTFTLKVSVPKSTPDGEDKLRKPANYPTARWIFTPSYNRYASGPGQAL
LDRSAALQEPSSDCLADIGHRFHMNVLVVRHEEFEAYRDSFGHQYVLLSM
PNRMPYSETVLKRSNPPAGFCFAEGGGIGYARHFIQLWAHANTIPFVWVV
DDNVQLCHELDTGTGLFNPCGFTHVMDSLERVMLGTEMSDVAVKSAMNTQ
GVFRAVSDHASDNDVEQTERNSDPTMRCPRIDAKIKTVAHFCGQADYYGL
LGIGRHGIGSHNAKGQGNFATKFGVTHSVYSFFLLNVKSTVSRGAYYPMK
KYWEDVEFNHIVDEKRLVVCKFRKFSHCKKNLQPLQTWTLRGSTECPRFE
YVRDIALGAIENEHYTCTTDAGDAADTPSELLALHEYLWQEALWFHPFGE
IYTTGFDVPLWGGRVSVTPEVDISYEESTSRIGDRTTEGAKAVLILLPGG
VHSEGFERLQAFVTEKASKNPPESKVWVVMSLPRYASSVDAADAMHVGRW
VQELQDSQ
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mRNA from alignment at S-dermatodea_contig10237:3167..6990-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig10237.172.1 ID=mRNA_S-dermatodea_contig10237.172.1|Name=mRNA_S-dermatodea_contig10237.172.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3824bp|location=Sequence derived from alignment at S-dermatodea_contig10237:3167..6990- (Saccorhiza dermatodea SderLu1190fm monoicous)
CTCCATCACTATGAAAAATACAAGCCGGGCCCGAAGCATTTCGACAAAGA CAGGGCTGAGGAGGCTGATCGTGATTCCCAGCGATTAATTTTGTCAGCAG AGTGCCAAATAGGCAAGACCGGAGCCTACATTCAGTATCTGACGCTCCTT TCAAAGGAGACCAAGAGCAAATTGGATCGTATTCCGTCCCCCACGGCGAT GCAGCTCGAGCAGGGAGGGCTTGGGAGCGCAATCAGTTGGCTCCTCCCGT ACTGGTTTACCTTTACCTATGGCGATCGCGATGCAATTGCCAGCACCTAC GGCCGCCTTCTCGCCAGCAAATATACTGCCGCAGTCTCAAAGGAGCGCGT GTTTTATGTGGCGCAAAGCTGCAAGGGTGAAGGCCAATGGCTGGAAAACT ACGTTGATCGTCTTTCCCGGCCGTGTGGGGAGCACATTATATCTGAGGAA GGGAAATTGCGCCTCACCAAACTGGTGCTGAGACAGGGAGAGCTGCAGGC GCCGTTCGACACCGAAGGCGATCTTTTAATGGCCAACGCTCCCTACGTAT CCCTCAAAGAGGCCATAAACTGGGATAATAGGTTCGACCCTAAGCTGGGT GTCATCCTCTGTACTTGTACAGACGGCGATACATGTGACTGCCAGAGGGT CGTGGAATCCCAAGAATTTGGGAAGGGTCTCACGATTAGAATGGCAGATC TGGCAATGGGAGGCGAAAGTGGTGCGATGGATAACCGCTGGAATGCGCCC CAGGAAAGCGCTCAAAGTGAGAACGTTGTGTTTGGGTGGTTTGGTCTCTC ACAGATACGTGGATACGTCGATCTCCTGTAGCATCTGCACAACCCCTGAC GCTTTATCTCCATCTTAAATCCCGTGTTCGTGACCCAACTTCCCCTCAAG TGAGACGTTTATGTCCAACCGCTAAGCCCTACACCCCACCTTGCTGGTGG ATGTCGATACGTCGGTCTTTTATTCCTGCCCGTTACAGGGCGTTCCAATC CAGCTGGTCATTCGCCTCAGGAGGTTGACGAGTTTTCTGCCAAACAGCCA ACGCAGGGGCCGCCGAACGATCAAAACGACTCCAGTCACCTGCTGCAAAA TTATACGTTCGAATACTCGCGCCCGGACCAGCCAGGCTTTAGCAAAACCT TCACGCTCAAGGTTTCCGTTCCCAAATCGACGCCCGATGGTGAGGACAAG CTCCGCAAACCCGCCAACTACCCCACTGCGAGATGGATATTCACGCCATC CTACAACCGGTACGCCAGTGGTCCGGGACAAGCTCTTCTTGATCGCTCGG CAGCCCTACAAGAGCCATCAAGCGACTGTCTGGCTGATATTGGGCACAGG TGATCCTCTGGACGCTTATTGACGTTCGAACGACTGTCTCATGAGTACTG CAGTTAGTTACAGAATGCAGCCACACCTCAAATTTGCGGTTTCAATAGTC ATACTCAGCCTTCCCCATCTCCCCTAGCTTGCAATGGTGCACACACCATG ATATACAGGTATCTCACTACACAGTAGATCAGTATTGCCAGTAGACATCA CCTGAAAAACGTGCGATTTTGTCAAAATACCGATGAGCGCAAGCGTAACG GTAACCTCTTTCTTGTCTCATTGTCGCGCAGGCATCCATAAACGGAGATA TATTCTACCAACTTACGGAGTTCAACGCAATATACCAGGGAGTTATCACA CTCTCCCCTCCCCCCTGCTTGATCGCTGTGCTCATTCTTAGGTTCCACAT GAATGTGCTGGTGGTTCGTCATGAGGAGTTCGAAGCCTACAGGTCAGTAA CTGCGACTGCGACATGTGTCTCAGCTAGGAATGATTATTTTCCTTTGTTC TTGTCAAGGGCCAATTCAATTGAGAGCCACGTGGTTTGTCCCCGGCTTGA GTATACTTGCACTACGCTTGCATACCGCCTTTGACATTTAAAACGTGCCT TCAAATTGCTGGTGGTTGTGCAGGGACTCCTTCGGCCATCAATACGTGTT GCTCTCGATGCCAAACAGGATGCCGTACAGCGAGACAGGTGTGAAACATG TTTCCCCCGAAAACGCGATAAGGCTATAGTTCGACGACCCCGTCGGTGGT TTGAGTTGGCGCTGATGGCTATCGTAGATTTTCGGAGCGACACTTTCCGA TATGCACCTGCAACATTTCCCTTAGGAGTCGTACATACTGGGGGCAATCG GGTACGCCCGCTACCGTCCACATATGCCTGTTCTGCCCTACAAAGGGTAC ACGTCGGCAAATACAACCATATCTATACCCTTGACTCATTGTACTTGTTG CAGCAAACTTAGCGTATACCGGCGTAGACGTACACGAATAGAGGCCGGAC TTCATTTAGTCGACAGGGTTCCTCATATTCACAGAAATACCACCCCTGAG TCCTTAAACGCTCCAATCCCCCCGCAGGGTTTTGTTTCGCTGAAGGTGGC GGCATCGGATACGCCCGGCACTTCATACAGCTATGGGCTCACGCCAACAC TATCCCCTTCGTGTGGGTTGTTGACGACAACGTTCAGCTGTGCCACGAAC TCGACACTGGCACAGGGCTGTTCAATCCATGCGGGTTCACTCATGTCATG GACTCTCTGGAACGTGTCATGCTCGGTACAGAAATGTCAGACGTTGCGGT AAAGTCTGCAATGAATACACAAGGAGTTTTTCGTGCGGTCTCTGACCACG CGTCTGACAACGACGTGGAGCAGACGGAGCGTAACAGCGATCCTACCATG CGATGCCCACGTATTGATGGTGACGATCGGTTCAGAAAATCTCTCCGTGA GAGATTTGAGCTTGTGAGTCACCCACGAGCCAAAATCAAAACAGTAGCAC ACTTCTGCGGTCAAGCTGATTACTACGGACTGCTAGGAATCGGAAGGCAT GGTATCGGGTCCCATAACGCCAAGGGTCAGGGTAATTTTGCAACCAAATT CGGTGTTACTCATAGCGTCTACTCGTTCTTCCTGTTGAACGTCAAGAGTA CGGTCAGTCGAGGAGCGTACTACCCGATGAAGAAATATTGGGAAGACGTC GAGTTCAACCACATAGTGGACGAGAAGCGTCTGGTCGTGTGTAAATTCCG AAAGTTTTCCCACTGCAAGAAGAATCTCCAACCCCTTCAGACATGGACGC TTCGTGGCTCGACCGAATGCCCACGGTTCGAGTATGTCAGAGACATCGCA CTGGGCGCAATCGAGAACGAGCATTACACATGTACTACTGATGCCGGCGA CGCAGCTGACACGCCAAGCGAATTGCTTGCCCTCCACGAGTATCTGTGGC AAGAGGCTCTGTGGTTTCACCCGTTCGGTGAGATCTATACCACTGGCTTC GATGTTCCCTTGTGGGGGGGACGAGTTAGCGTAACGCCTGAGGTGGACAT TTCGTACGAGGAGAGCACGTCTCGGATTGGAGATCGGACAACAGAAGGGG CCAAGGCCGTCCTTATCTTGCTACCCGGAGGCGTACACAGCGAGGGTTTC GAACGACTCCAAGCGTTTGTTACAGAAAAGGCGAGTAAAAACCCGCCAGA GAGCAGTATAGGAAGCTCGGGGGGGCGGGGCGGGGGGGGACATCCCGGAC GCCGGGTTACTTGCGCTTACAAAGGTGTACCAATATCAGCTACGATAAAC ATGCAGCGACTCCTATCTAATTTCGCAGCCCCGCTTTCATTGCATACACG GCAGACCTCTCACGGCCACGAAGAAGTATGGGTCGTGATGAGCCTGCCTC GTTATGCGTCAAGCGTCGATGCGGCCGATGCGATGCACGTCGGCCGATGG GTGCAGGAGCTACAAGATTCTCAA
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Coding sequence (CDS) from alignment at S-dermatodea_contig10237:3167..6990-

>mRNA_S-dermatodea_contig10237.172.1 ID=mRNA_S-dermatodea_contig10237.172.1|Name=mRNA_S-dermatodea_contig10237.172.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=4848bp|location=Sequence derived from alignment at S-dermatodea_contig10237:3167..6990- (Saccorhiza dermatodea SderLu1190fm monoicous)
CTCCATCACTATGAAAAATACAAGCCGGGCCCGAAGCATTTCGACAAAGA
CAGGGCTGAGGAGGCTGATCGTGATTCCCAGCGATTAATTTTGTCAGCAG
AGTGCCAAATAGGCAAGACCGGAGCCTACATTCAGTATCTGACGCTCCTT
TCAAAGGAGACCAAGAGCAAATTGGATCGTATTCCGTCCCCCACGGCGAT
GCAGCTCGAGCAGGGAGGGCTTGGGAGCGCAATCAGTTGGCTCCTCCCGT
ACTGGTTTACCTTTACCTATGGCGATCGCGATGCAATTGCCAGCACCTAC
GGCCGCCTTCTCGCCAGCAAATATACTGCCGCAGTCTCAAAGGAGCGCGT
GTTTTATGTGGCGCAAAGCTGCAAGGGTGAAGGCCAATGGCTGGAAAACT
ACGTTGATCGTCTTTCCCGGCCGTGTGGGGAGCACATTATATCTGAGGAA
GGGAAATTGCGCCTCACCAAACTGGTGCTGAGACAGGGAGAGCTGCAGGC
GCCGTTCGACACCGAAGGCGATCTTTTAATGGCCAACGCTCCCTACGTAT
CCCTCAAAGAGGCCATAAACTGGGATAATAGGTTCGACCCTAAGCTGGGT
GTCATCCTCTGTACTTGTACAGACGGCGATACATGTGACTGCCAGAGGGT
CGTGGAATCCCAAGAATTTGGGAAGGGTCTCACGATTAGAATGGCAGATC
TGGCAATGGGAGGCGAAAGTGGTGCGATGGATAACCGCTGGAATGCGCCC
CAGGAAAGCGCTCAAACTCCATCACTATGAAAAATACAAGCCGGGCCCGA
AGCATTTCGACAAAGACAGGGCTGAGGAGGCTGATCGTGATTCCCAGCGA
TTAATTTTGTCAGCAGAGTGCCAAATAGGCAAGACCGGAGCCTACATTCA
GTATCTGACGCTCCTTTCAAAGGAGACCAAGAGCAAATTGGATCGTATTC
CGTCCCCCACGGCGATGCAGCTCGAGCAGGGAGGGCTTGGGAGCGCAATC
AGTTGGCTCCTCCCGTACTGGTTTACCTTTACCTATGGCGATCGCGATGC
AATTGCCAGCACCTACGGCCGCCTTCTCGCCAGCAAATATACTGCCGCAG
TCTCAAAGGAGCGCGTGTTTTATGTGGCGCAAAGCTGCAAGGGTGAAGGC
CAATGGCTGGAAAACTACGTTGATCGTCTTTCCCGGCCGTGTGGGGAGCA
CATTATATCTGAGGAAGGGAAATTGCGCCTCACCAAACTGGTGCTGAGAC
AGGGAGAGCTGCAGGCGCCGTTCGACACCGAAGGCGATCTTTTAATGGCC
AACGCTCCCTACGTATCCCTCAAAGAGGCCATAAACTGGGATAATAGGTT
CGACCCTAAGCTGGGTGTCATCCTCTGTACTTGTACAGACGGCGATACAT
GTGACTGCCAGAGGGTCGTGGAATCCCAAGAATTTGGGAAGGGTCTCACG
ATTAGAATGGCAGATCTGGCAATGGGAGGCGAAAGTGGTGCGATGGATAA
CCGCTGGAATGCGCCCCAGGAAAGCGCTCAAACTGGTCATTCGCCTCAGG
AGGTTGACGAGTTTTCTGCCAAACAGCCAACGCAGGGGCCGCCGAACGAT
CAAAACGACTCCAGTCACCTGCTGCAAAATTATACGTTCGAATACTCGCG
CCCGGACCAGCCAGGCTTTAGCAAAACCTTCACGCTCAAGGTTTCCGTTC
CCAAATCGACGCCCGATGGTGAGGACAAGCTCCGCAAACCCGCCAACTAC
CCCACTGCGAGATGGATATTCACGCCATCCTACAACCGGTACGCCAGTGG
TCCGGGACAAGCTCTTCTTGATCGCTCGGCAGCCCTACAAGAGCCATCAA
GCGACTGTCTGGCTGATATTGGGCACAGCTGGTCATTCGCCTCAGGAGGT
TGACGAGTTTTCTGCCAAACAGCCAACGCAGGGGCCGCCGAACGATCAAA
ACGACTCCAGTCACCTGCTGCAAAATTATACGTTCGAATACTCGCGCCCG
GACCAGCCAGGCTTTAGCAAAACCTTCACGCTCAAGGTTTCCGTTCCCAA
ATCGACGCCCGATGGTGAGGACAAGCTCCGCAAACCCGCCAACTACCCCA
CTGCGAGATGGATATTCACGCCATCCTACAACCGGTACGCCAGTGGTCCG
GGACAAGCTCTTCTTGATCGCTCGGCAGCCCTACAAGAGCCATCAAGCGA
CTGTCTGGCTGATATTGGGCACAGGTTCCACATGAATGTGCTGGTGGTTC
GTCATGAGGAGTTCGAAGCCTACAGGTTCCACATGAATGTGCTGGTGGTT
CGTCATGAGGAGTTCGAAGCCTACAGGGACTCCTTCGGCCATCAATACGT
GTTGCTCTCGATGCCAAACAGGATGCCGTACAGCGAGACAGGGACTCCTT
CGGCCATCAATACGTGTTGCTCTCGATGCCAAACAGGATGCCGTACAGCG
AGACAGTCCTTAAACGCTCCAATCCCCCCGCAGGGTTTTGTTTCGCTGAA
GGTGGCGGCATCGGATACGCCCGGCACTTCATACAGCTATGGGCTCACGC
CAACACTATCCCCTTCGTGTGGGTTGTTGACGACAACGTTCAGCTGTGCC
ACGAACTCGACACTGGCACAGGGCTGTTCAATCCATGCGGGTTCACTCAT
GTCATGGACTCTCTGGAACGTGTCATGCTCGGTACAGAAATGTCAGACGT
TGCGGTAAAGTCTGCAATGAATACACAAGGAGTTTTTCGTGCGGTCTCTG
ACCACGCGTCTGACAACGACGTGGAGCAGACGGAGCGTAACAGCGATCCT
ACCATGCGATGCCCACGTATTGATGTCCTTAAACGCTCCAATCCCCCCGC
AGGGTTTTGTTTCGCTGAAGGTGGCGGCATCGGATACGCCCGGCACTTCA
TACAGCTATGGGCTCACGCCAACACTATCCCCTTCGTGTGGGTTGTTGAC
GACAACGTTCAGCTGTGCCACGAACTCGACACTGGCACAGGGCTGTTCAA
TCCATGCGGGTTCACTCATGTCATGGACTCTCTGGAACGTGTCATGCTCG
GTACAGAAATGTCAGACGTTGCGGTAAAGTCTGCAATGAATACACAAGGA
GTTTTTCGTGCGGTCTCTGACCACGCGTCTGACAACGACGTGGAGCAGAC
GGAGCGTAACAGCGATCCTACCATGCGATGCCCACGTATTGATGCCAAAA
TCAAAACAGTAGCACACTTCTGCGGTCAAGCTGATTACTACGGACTGCTA
GGAATCGGAAGGCATGGTATCGGGTCCCATAACGCCAAGGGTCAGGGTAA
TTTTGCAACCAAATTCGGTGTTACTCATAGCGTCTACTCGTTCTTCCTGT
TGAACGTCAAGAGTACGGTCAGTCGAGGAGCGTACTACCCGATGAAGAAA
TATTGGGAAGACGTCGAGTTCAACCACATAGTGGACGAGAAGCGTCTGGT
CGTGTGTAAATTCCGAAAGTTTTCCCACTGCAAGAAGAATCTCCAACCCC
TTCAGACATGGACGCTTCGTGGCTCGACCGAATGCCCACGGTTCGAGTAT
GTCAGAGACATCGCACTGGGCGCAATCGAGAACGAGCATTACACATGTAC
TACTGATGCCGGCGACGCAGCTGACACGCCAAGCGAATTGCTTGCCCTCC
ACGAGTATCTGTGGCAAGAGGCTCTGTGGTTTCACCCGTTCGGTGAGATC
TATACCACTGGCTTCGATGTTCCCTTGTGGGGGGGACGAGTTAGCGTAAC
GCCTGAGGTGGACATTTCGTACGAGGAGAGCACGTCTCGGATTGGAGATC
GGACAACAGAAGGGGCCAAGGCCGTCCTTATCTTGCTACCCGGAGGCGTA
CACAGCGAGGGTTTCGAACGACTCCAAGCGTTTGTTACAGAAAAGGCGAG
TAAAAACCCGCCAGAGAGCACCAAAATCAAAACAGTAGCACACTTCTGCG
GTCAAGCTGATTACTACGGACTGCTAGGAATCGGAAGGCATGGTATCGGG
TCCCATAACGCCAAGGGTCAGGGTAATTTTGCAACCAAATTCGGTGTTAC
TCATAGCGTCTACTCGTTCTTCCTGTTGAACGTCAAGAGTACGGTCAGTC
GAGGAGCGTACTACCCGATGAAGAAATATTGGGAAGACGTCGAGTTCAAC
CACATAGTGGACGAGAAGCGTCTGGTCGTGTGTAAATTCCGAAAGTTTTC
CCACTGCAAGAAGAATCTCCAACCCCTTCAGACATGGACGCTTCGTGGCT
CGACCGAATGCCCACGGTTCGAGTATGTCAGAGACATCGCACTGGGCGCA
ATCGAGAACGAGCATTACACATGTACTACTGATGCCGGCGACGCAGCTGA
CACGCCAAGCGAATTGCTTGCCCTCCACGAGTATCTGTGGCAAGAGGCTC
TGTGGTTTCACCCGTTCGGTGAGATCTATACCACTGGCTTCGATGTTCCC
TTGTGGGGGGGACGAGTTAGCGTAACGCCTGAGGTGGACATTTCGTACGA
GGAGAGCACGTCTCGGATTGGAGATCGGACAACAGAAGGGGCCAAGGCCG
TCCTTATCTTGCTACCCGGAGGCGTACACAGCGAGGGTTTCGAACGACTC
CAAGCGTTTGTTACAGAAAAGGCGAGTAAAAACCCGCCAGAGAGCAAAGT
ATGGGTCGTGATGAGCCTGCCTCGTTATGCGTCAAGCGTCGATGCGGCCG
ATGCGATGCACGTCGGCCGATGGGTGCAGGAGCTACAAGATTCTCAAAAG
TATGGGTCGTGATGAGCCTGCCTCGTTATGCGTCAAGCGTCGATGCGGCC
GATGCGATGCACGTCGGCCGATGGGTGCAGGAGCTACAAGATTCTCAA
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