mRNA_S-dermatodea_contig10235.169.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10235.169.1 vs. uniprot
Match: D8LMK2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMK2_ECTSI) HSP 1 Score: 89.7 bits (221), Expect = 3.290e-20 Identity = 43/57 (75.44%), Postives = 48/57 (84.21%), Query Frame = 1
Query: 1 VQHEMIKAEMSILGRSTDELTSYAGYGGARGAAAGGKLCYHNLRGVSDYGKAGAGEV 171
VQ EMI+AE +ILGRSTDELTSYAGYGGA+ G KLCYHN+RG+ DYGKAGA EV
Sbjct: 95 VQREMIRAEQAILGRSTDELTSYAGYGGAKKNFQGDKLCYHNMRGIGDYGKAGAAEV 151
BLAST of mRNA_S-dermatodea_contig10235.169.1 vs. uniprot
Match: D8LMK3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMK3_ECTSI) HSP 1 Score: 66.2 bits (160), Expect = 3.280e-13 Identity = 33/57 (57.89%), Postives = 40/57 (70.18%), Query Frame = 1
Query: 1 VQHEMIKAEMSILGRSTDELTSYAGYGGARGAAAGGKLCYHNLRGVSDYGKAGAGEV 171
+Q EM+KAE +ILGR TD L SY GYGGA G KL Y+N+ G+ YG+AGAGE
Sbjct: 1 MQREMMKAEQAILGRFTDALASYTGYGGAMKNLQGDKLWYNNMLGIGAYGEAGAGET 57
BLAST of mRNA_S-dermatodea_contig10235.169.1 vs. uniprot
Match: A0A7S4K336_9STRA (Peptide-methionine (S)-S-oxide reductase n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K336_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 1.370e-12 Identity = 33/57 (57.89%), Postives = 40/57 (70.18%), Query Frame = 1
Query: 1 VQHEMIKAEMSILGRSTDELTSYAGYGGARGAAAGGKLCYHNLRGVSDYGKAGAGEV 171
+QHE + AE ++LGRS ELTS GY G GGK+CYHNL+ V+DYGK G GEV
Sbjct: 91 IQHEFVLAERNLLGRSDKELTSRTGYAGGTKTGDGGKVCYHNLQFVADYGKLGHGEV 147
BLAST of mRNA_S-dermatodea_contig10235.169.1 vs. uniprot
Match: B7FSB8_PHATC (Peptide-methionine (S)-S-oxide reductase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FSB8_PHATC) HSP 1 Score: 68.2 bits (165), Expect = 3.500e-12 Identity = 32/57 (56.14%), Postives = 41/57 (71.93%), Query Frame = 1
Query: 1 VQHEMIKAEMSILGRSTDELTSYAGYGGARGAAAGGKLCYHNLRGVSDYGKAGAGEV 171
VQHE+++AE +ILGRS +ELT+ AGY G A GK+CYHN ++DYGK G EV
Sbjct: 82 VQHELVEAEKTILGRSDNELTARAGYAGGTKGAKDGKVCYHNAAQIADYGKLGHAEV 138
BLAST of mRNA_S-dermatodea_contig10235.169.1 vs. uniprot
Match: A0A7S1YNI6_9STRA (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YNI6_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 7.350e-12 Identity = 34/57 (59.65%), Postives = 42/57 (73.68%), Query Frame = 1
Query: 1 VQHEMIKAEMSILGRSTDELTSYAGYGGARGAAAGGKLCYHNLRGVSDYGKAGAGEV 171
VQHE+++AE S+LGRS ++LTS AGY G G A GK+CYHN V+DYGK G EV
Sbjct: 98 VQHELVEAERSMLGRSDEQLTSRAGYAG--GKAPDGKVCYHNALNVADYGKLGHAEV 152
BLAST of mRNA_S-dermatodea_contig10235.169.1 vs. uniprot
Match: A0A1E7F616_9STRA (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F616_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 3.660e-11 Identity = 32/57 (56.14%), Postives = 37/57 (64.91%), Query Frame = 1
Query: 1 VQHEMIKAEMSILGRSTDELTSYAGYGGARGAAAGGKLCYHNLRGVSDYGKAGAGEV 171
VQHEM++AE +LGR LTS AGY G GK+CYHNL VSDYGK G E+
Sbjct: 30 VQHEMVEAERKLLGRDDKMLTSRAGYAGGNLGMKDGKVCYHNLAMVSDYGKLGHAEI 86
BLAST of mRNA_S-dermatodea_contig10235.169.1 vs. uniprot
Match: A0A6U3BKH7_9EUKA (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A6U3BKH7_9EUKA) HSP 1 Score: 63.9 bits (154), Expect = 1.470e-10 Identity = 29/57 (50.88%), Postives = 38/57 (66.67%), Query Frame = 1
Query: 1 VQHEMIKAEMSILGRSTDELTSYAGYGGARGAAAGGKLCYHNLRGVSDYGKAGAGEV 171
VQHEM++ E +L R +LTS GY G + GGK+CYHN+R V+DYG+ G EV
Sbjct: 107 VQHEMVELEEKVLSRRGKQLTSLTGYAGGKKLGDGGKVCYHNMRQVADYGRLGHAEV 163
BLAST of mRNA_S-dermatodea_contig10235.169.1 vs. uniprot
Match: A0A7S0ASC4_9STRA (Peptide-methionine (S)-S-oxide reductase (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ASC4_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 2.540e-10 Identity = 33/57 (57.89%), Postives = 37/57 (64.91%), Query Frame = 1
Query: 1 VQHEMIKAEMSILGRSTDELTSYAGYGGARGAAAGGKLCYHNLRGVSDYGKAGAGEV 171
VQHE + AE ILGRS D+LT+ AGY G R A +CYHN RGV DYG G EV
Sbjct: 94 VQHEFVVAEQRILGRSEDDLTARAGYAGGR--AKDDLVCYHNARGVGDYGTLGHAEV 148
BLAST of mRNA_S-dermatodea_contig10235.169.1 vs. uniprot
Match: A0A7S0H279_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H279_9EUKA) HSP 1 Score: 60.1 bits (144), Expect = 4.170e-9 Identity = 27/56 (48.21%), Postives = 36/56 (64.29%), Query Frame = 1
Query: 4 QHEMIKAEMSILGRSTDELTSYAGYGGARGAAAGGKLCYHNLRGVSDYGKAGAGEV 171
QHE I+ E LGRS +LTS GY G + G++CYHN+R ++DYG+ G EV
Sbjct: 224 QHEFIEMEKQKLGRSGSQLTSLTGYAGGKKVGDSGRVCYHNMRQIADYGRLGHAEV 279
BLAST of mRNA_S-dermatodea_contig10235.169.1 vs. uniprot
Match: A0A8J5XTY7_DIALT (Peptide-methionine (S)-S-oxide reductase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XTY7_DIALT) HSP 1 Score: 59.3 bits (142), Expect = 4.890e-9 Identity = 28/58 (48.28%), Postives = 40/58 (68.97%), Query Frame = 1
Query: 1 VQHEMI-KAEMSILGRSTDELTSYAGYGGARGAAAGGKLCYHNLRGVSDYGKAGAGEV 171
VQH+++ + E +ILGRS +ELT+ GY G + G++CYH++ GVSDYG G EV
Sbjct: 57 VQHDVVTRVERAILGRSDEELTALTGYAGGTHTSQDGRVCYHSMTGVSDYGMLGHAEV 114 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10235.169.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10235.169.1 >prot_S-dermatodea_contig10235.169.1 ID=prot_S-dermatodea_contig10235.169.1|Name=mRNA_S-dermatodea_contig10235.169.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=54bp MIKAEMSILGRSTDELTSYAGYGGARGAAAGGKLCYHNLRGVSDYGKAGAback to top mRNA from alignment at S-dermatodea_contig10235:4377..4550- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10235.169.1 ID=mRNA_S-dermatodea_contig10235.169.1|Name=mRNA_S-dermatodea_contig10235.169.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=174bp|location=Sequence derived from alignment at S-dermatodea_contig10235:4377..4550- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10235:4377..4550- >mRNA_S-dermatodea_contig10235.169.1 ID=mRNA_S-dermatodea_contig10235.169.1|Name=mRNA_S-dermatodea_contig10235.169.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=324bp|location=Sequence derived from alignment at S-dermatodea_contig10235:4377..4550- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |