mRNA_S-dermatodea_contig10223.161.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_S-dermatodea_contig10223.161.1
Unique Name	mRNA_S-dermatodea_contig10223.161.1
Type	mRNA
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)

Homology

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BLAST of mRNA_S-dermatodea_contig10223.161.1 vs. uniprot
Match: A0A6H5KIW5_9PHAE (Aqp protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIW5_9PHAE)

HSP 1 Score: 208 bits (529), Expect = 3.010e-65
Identity = 95/128 (74.22%), Postives = 109/128 (85.16%), Query Frame = 1

Query:    4 NCRANDLQVADAFGGEVVCTFLLVTTVFAACDGELGRKNAHTGPLLPFVIGMAVLLDHLILIPVDGCSINPARSFATAFTNNQWDDHWVFWIGPMLGGVLATLVWETVLRPDQPVEDQEKHIVQAAAV 387
            N  A+++   DAFG EV+CTFLLV TVFAACDGELGRK AHTGPLLP VIGMAVLL HL+LIP+DG SINPARSFATA TNN+W DHWVFW+GP+LGGVLAT+ WE +LRPDQ VE QEK++ QA +V
Sbjct:  152 NALADNVSATDAFGAEVLCTFLLVVTVFAACDGELGRKTAHTGPLLPLVIGMAVLLAHLVLIPIDGASINPARSFATAVTNNEWGDHWVFWVGPLLGGVLATVTWEAILRPDQVVE-QEKNVPQAISV 278

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BLAST of mRNA_S-dermatodea_contig10223.161.1 vs. uniprot
Match: D8LTV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTV4_ECTSI)

HSP 1 Score: 203 bits (517), Expect = 2.100e-63
Identity = 87/113 (76.99%), Postives = 99/113 (87.61%), Query Frame = 1

Query:   25 QVADAFGGEVVCTFLLVTTVFAACDGELGRKNAHTGPLLPFVIGMAVLLDHLILIPVDGCSINPARSFATAFTNNQWDDHWVFWIGPMLGGVLATLVWETVLRPDQPVEDQEK 363
            Q  +AFG EV+CTFLLV TVF ACDGELGRKNAHTGPLLP VIGMAVL+ HL+LIP+DGCSINPARSFATA  NN+WDDHWVFW+GP+LGGVL T  WE +LRPDQPV+D+ +
Sbjct:  154 QAGEAFGAEVLCTFLLVVTVFTACDGELGRKNAHTGPLLPLVIGMAVLIAHLVLIPIDGCSINPARSFATAVINNKWDDHWVFWVGPLLGGVLGTATWEAILRPDQPVDDEHE 266

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BLAST of mRNA_S-dermatodea_contig10223.161.1 vs. uniprot
Match: A0A6H5JZJ3_9PHAE (Aqp protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZJ3_9PHAE)

HSP 1 Score: 201 bits (512), Expect = 5.140e-60
Identity = 87/120 (72.50%), Postives = 101/120 (84.17%), Query Frame = 1

Query:    4 NCRANDLQVADAFGGEVVCTFLLVTTVFAACDGELGRKNAHTGPLLPFVIGMAVLLDHLILIPVDGCSINPARSFATAFTNNQWDDHWVFWIGPMLGGVLATLVWETVLRPDQPVEDQEK 363
            N  A+ +   +AFG EV+CTFLLV TVF ACDGELGRKNAHTGPLLP VIGMAVL+ HL+LIP+DGCSINPARSFATA  NN+WDDHWVFW+GP+LGGVL T  WE +LRPDQ V+D+ +
Sbjct:  387 NAIADGVSAIEAFGAEVLCTFLLVVTVFTACDGELGRKNAHTGPLLPLVIGMAVLIAHLVLIPIDGCSINPARSFATAVINNKWDDHWVFWVGPLLGGVLGTATWEAILRPDQTVDDEHE 506

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BLAST of mRNA_S-dermatodea_contig10223.161.1 vs. uniprot
Match: A0A835YY46_9STRA (Aquaporin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY46_9STRA)

HSP 1 Score: 140 bits (353), Expect = 1.620e-38
Identity = 63/125 (50.40%), Postives = 81/125 (64.80%), Query Frame = 1

Query:    4 NCRANDLQVADAFGGEVVCTFLLVTTVFAACDGELGRKNAHTGPLLPFVIGMAVLLDHLILIPVDGCSINPARSFATAFTNNQWDDHWVFWIGPMLGGVLATLVWETVLRPDQPVEDQEKHIVQA 378
            N   N +    A GGE++CT+LLVT V  A +  L +   H   LLP+VIGM V+L H  L+PVDGCSINPARSF +A   N W DHWVFW+GP++G  +ATL++E +LRP +P    E    QA
Sbjct:  149 NVVNNQVGAHQALGGEILCTWLLVTVVLCATNPGLQKAYVHQAVLLPWVIGMTVMLCHFTLVPVDGCSINPARSFGSAIITNTWKDHWVFWLGPLIGATIATLLFEAILRPPEPAPKLEAEDPQA 273

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BLAST of mRNA_S-dermatodea_contig10223.161.1 vs. uniprot
Match: I0ZAA7_COCSC (Plasma membrane intrinsic protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0ZAA7_COCSC)

HSP 1 Score: 117 bits (293), Expect = 2.010e-29
Identity = 53/101 (52.48%), Postives = 64/101 (63.37%), Query Frame = 1

Query:   31 ADAFGGEVVCTFLLVTTVFAACDGELGRKNAHTGPLLPFVIGMAVLLDHLILIPVDGCSINPARSFATAFTNNQWDDHWVFWIGPMLGGVLATLVWETVLR 333
            A  +G E + T  LV TVFAA D E     AH   L PF IGM V L HL+ IP+DGCSINPARSF  A  +  WD+ WVFW+GP+ G VLA  ++E + R
Sbjct:  166 AAGWGLETILTMALVFTVFAATDSERATDTAHLPVLAPFAIGMVVFLCHLVAIPLDGCSINPARSFGAAAVSGSWDNQWVFWVGPLSGAVLAAAIYELIFR 266

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BLAST of mRNA_S-dermatodea_contig10223.161.1 vs. uniprot
Match: A0A8J9WPI2_9CHLO (Aquaporin PIP2-5 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WPI2_9CHLO)

HSP 1 Score: 116 bits (290), Expect = 5.460e-29
Identity = 54/110 (49.09%), Postives = 65/110 (59.09%), Query Frame = 1

Query:    4 NCRANDLQVADAFGGEVVCTFLLVTTVFAACDGELGRKNAHTGPLLPFVIGMAVLLDHLILIPVDGCSINPARSFATAFTNNQWDDHWVFWIGPMLGGVLATLVWETVLR 333
            N  +  +  A  +G E + T  LV TVFAA D E     AH   L PF IGM V L HL+ IP+DGCSINPARSF  A    +WDD WVFW+GP+ G V+A   +E   R
Sbjct:  156 NALSAGVNNAAGWGLETILTMALVFTVFAATDAERASDTAHLPVLAPFAIGMVVFLCHLVAIPLDGCSINPARSFGAAAVAGKWDDQWVFWVGPLCGAVMAATAYELFFR 265

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BLAST of mRNA_S-dermatodea_contig10223.161.1 vs. uniprot
Match: A0A836CE69_9STRA (Transmembrane channel protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE69_9STRA)

HSP 1 Score: 113 bits (283), Expect = 7.710e-28
Identity = 49/117 (41.88%), Postives = 71/117 (60.68%), Query Frame = 1

Query:    4 NCRANDLQVADAFGGEVVCTFLLVTTVFAACDGELGRKNAHTGP--LLPFVIGMAVLLDHLILIPVDGCSINPARSFATAFTNNQWDDHWVFWIGPMLGGVLATLVWETVLRPDQPV 348
            N  A  +    A   E++ T ++   V      EL      TG   LLP  +G A++L H++LIP+DGCS+NPARSF  A  + +W D W+FW+GP++GG++A L+WE +LRP Q V
Sbjct:  173 NILAVGVSAGQALFAEILSTAMVCLAVIIGLSSELWHLMEKTGMDILLPIAVGTAIVLAHMVLIPIDGCSVNPARSFGAAVISGEWADMWIFWVGPLIGGLVAILLWELILRPPQEV 289

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BLAST of mRNA_S-dermatodea_contig10223.161.1 vs. uniprot
Match: A0A1Y1I4M6_KLENI (Aquaporin n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I4M6_KLENI)

HSP 1 Score: 109 bits (273), Expect = 1.990e-27
Identity = 54/116 (46.55%), Postives = 71/116 (61.21%), Query Frame = 1

Query:   34 DAFGGEVVCTFLLVTTVFAACDGELGRKNA--HTGPLLPFVIGMAVLLDHLILIPVDGCSINPARSFATAFTNNQ---WDDHWVFWIGPMLGGVLATLVWETVLRPDQPVEDQEKH 366
            DA G E++ TF+L+TTVFAA D     +    H   L PF IG+AV + HL +IP+DG SINPARSF  A   N+   WDD W+FW+GP +G ++A  V+E  +R       Q KH
Sbjct:   94 DALGVEIIGTFVLITTVFAATDPVRSCREGSPHISALAPFAIGVAVFIVHLAIIPIDGTSINPARSFGPAVIYNKDFVWDDQWIFWVGPGIGALVAVFVYEWFIRGADFRSMQRKH 209

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BLAST of mRNA_S-dermatodea_contig10223.161.1 vs. uniprot
Match: A0A7J7QRE8_9CHLO (Plasma membrane intrinsic protein n=2 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QRE8_9CHLO)

HSP 1 Score: 111 bits (277), Expect = 2.290e-27
Identity = 46/101 (45.54%), Postives = 63/101 (62.38%), Query Frame = 1

Query:   25 QVADAFGGEVVCTFLLVTTVFAACDGELGRKNAHTGPLLPFVIGMAVLLDHLILIPVDGCSINPARSFATAFTNNQWDDHWVFWIGPMLGGVLATLVWETV 327
             V    G E++ T + V  VFAA D   G  +AH   L P  IG+ V L H++ IP+DGCS+NPARSF TA  +  W  HW+FW+GP++GG  A L++E +
Sbjct:  147 NVGTGLGAELILTAIFVFVVFAAVDQTRGANSAHLPVLAPLAIGIVVFLAHVVAIPIDGCSVNPARSFGTAVVSRTWQHHWIFWVGPIVGGAAAGLLYEAL 247

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BLAST of mRNA_S-dermatodea_contig10223.161.1 vs. uniprot
Match: A0A8J9SGZ5_9CHLO (Aquaporin PIP2-4 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SGZ5_9CHLO)

HSP 1 Score: 110 bits (275), Expect = 6.100e-27
Identity = 53/109 (48.62%), Postives = 66/109 (60.55%), Query Frame = 1

Query:   13 ANDLQVADA--FGGEVVCTFLLVTTVFAACDGELGRKNAHTGPLLPFVIGMAVLLDHLILIPVDGCSINPARSFATAFTNNQWDDHWVFWIGPMLGGVLATLVWETVLR 333
            AN L ++ A  +G E + T  LV TVFAA D E     AH   L PF IGM VLL HL+ IP+DGCSINPAR+F  +  +  W   WVFW GP+ G +LA  ++E   R
Sbjct:  137 ANVLHISHAAGWGLETILTMALVFTVFAATDAERAVDTAHLPVLAPFAIGMVVLLCHLVAIPLDGCSINPARTFGASLVSGNWHGQWVFWAGPISGSILAVALYELAFR 245

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig10223.161.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig10223.161.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KIW5_9PHAE	3.010e-65	74.22	Aqp protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0...	[more]
D8LTV4_ECTSI	2.100e-63	76.99	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JZJ3_9PHAE	5.140e-60	72.50	Aqp protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta...	[more]
A0A835YY46_9STRA	1.620e-38	50.40	Aquaporin n=1 Tax=Tribonema minus TaxID=303371 Rep...	[more]
I0ZAA7_COCSC	2.010e-29	52.48	Plasma membrane intrinsic protein n=1 Tax=Coccomyx...	[more]
A0A8J9WPI2_9CHLO	5.460e-29	49.09	Aquaporin PIP2-5 n=1 Tax=Coccomyxa sp. Obi TaxID=2...	[more]
A0A836CE69_9STRA	7.710e-28	41.88	Transmembrane channel protein n=1 Tax=Tribonema mi...	[more]
A0A1Y1I4M6_KLENI	1.990e-27	46.55	Aquaporin n=1 Tax=Klebsormidium nitens TaxID=10523...	[more]
A0A7J7QRE8_9CHLO	2.290e-27	45.54	Plasma membrane intrinsic protein n=2 Tax=Scenedes...	[more]
A0A8J9SGZ5_9CHLO	6.100e-27	48.62	Aquaporin PIP2-4 n=1 Tax=Coccomyxa sp. Obi TaxID=2...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig10223	contig	S-dermatodea_contig10223:6524..8070 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	212.6
Seed ortholog evalue	1.1e-52
Seed eggNOG ortholog	2880.D8LTV5
Preferred name	MIP
KEGG ko	ko:K09863,ko:K09864,ko:K09865,ko:K09866,ko:K09867,ko:K09868,ko:K09872
KEGG TC	1.A.8,1.A.8.11,1.A.8.8
KEGG Pathway	ko04924,ko04962,ko04964,ko04970,ko04976,map04924,map04962,map04964,map04970,map04976
GOs	GO:0000003,GO:0000302,GO:0000323,GO:0001101,GO:0001568,GO:0001654,GO:0001655,GO:0001656,GO:0001666,GO:0001822,GO:0001944,GO:0002088,GO:0002237,GO:0002790,GO:0003008,GO:0003014,GO:0003091,GO:0003094,GO:0003097,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003779,GO:0005102,GO:0005198,GO:0005212,GO:0005215,GO:0005216,GO:0005217,GO:0005221,GO:0005223,GO:0005253,GO:0005261,GO:0005267,GO:0005326,GO:0005372,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005739,GO:0005764,GO:0005768,GO:0005769,GO:0005773,GO:0005783,GO:0005791,GO:0005794,GO:0005802,GO:0005829,GO:0005886,GO:0005887,GO:0005901,GO:0005902,GO:0005903,GO:0005911,GO:0006139,GO:0006163,GO:0006164,GO:0006182,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0006820,GO:0006833,GO:0006836,GO:0006855,GO:0006869,GO:0006884,GO:0006915,GO:0006950,GO:0006970,GO:0006972,GO:0006979,GO:0006996,GO:0007010,GO:0007015,GO:0007154,GO:0007163,GO:0007267,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007565,GO:0007568,GO:0007586,GO:0007588,GO:0007589,GO:0007600,GO:0007601,GO:0008092,GO:0008150,GO:0008152,GO:0008154,GO:0008219,GO:0008284,GO:0008324,GO:0008361,GO:0008509,GO:0008519,GO:0008643,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009187,GO:0009190,GO:0009259,GO:0009260,GO:0009314,GO:0009410,GO:0009411,GO:0009414,GO:0009415,GO:0009416,GO:0009506,GO:0009507,GO:0009526,GO:0009536,GO:0009605,GO:0009607,GO:0009611,GO:0009612,GO:0009617,GO:0009624,GO:0009628,GO:0009636,GO:0009651,GO:0009653,GO:0009719,GO:0009725,GO:0009737,GO:0009887,GO:0009888,GO:0009892,GO:0009914,GO:0009925,GO:0009941,GO:0009987,GO:0009991,GO:0010008,GO:0010015,GO:0010033,GO:0010035,GO:0010038,GO:0010053,GO:0010054,GO:0010226,GO:0010243,GO:0010256,GO:0010466,GO:0010496,GO:0010591,GO:0010592,GO:0010605,GO:0010632,GO:0010634,GO:0010817,GO:0010876,GO:0010941,GO:0010951,GO:0010959,GO:0012501,GO:0012505,GO:0012506,GO:0014070,GO:0014074,GO:0015075,GO:0015077,GO:0015079,GO:0015103,GO:0015112,GO:0015144,GO:0015166,GO:0015168,GO:0015238,GO:0015250,GO:0015267,GO:0015276,GO:0015318,GO:0015669,GO:0015670,GO:0015672,GO:0015696,GO:0015698,GO:0015701,GO:0015706,GO:0015711,GO:0015718,GO:0015721,GO:0015722,GO:0015791,GO:0015793,GO:0015833,GO:0015849,GO:0015850,GO:0015893,GO:0016020,GO:0016021,GO:0016043,GO:0016049,GO:0016050,GO:0016323,GO:0016324,GO:0018130,GO:0018995,GO:0019222,GO:0019233,GO:0019438,GO:0019637,GO:0019693,GO:0019725,GO:0019755,GO:0019899,GO:0019904,GO:0020003,GO:0021537,GO:0021591,GO:0021670,GO:0021700,GO:0022411,GO:0022414,GO:0022600,GO:0022603,GO:0022607,GO:0022622,GO:0022803,GO:0022834,GO:0022836,GO:0022838,GO:0022839,GO:0022857,GO:0022890,GO:0023052,GO:0023061,GO:0030001,GO:0030029,GO:0030036,GO:0030042,GO:0030054,GO:0030072,GO:0030104,GO:0030133,GO:0030135,GO:0030136,GO:0030141,GO:0030154,GO:0030155,GO:0030157,GO:0030162,GO:0030165,GO:0030184,GO:0030185,GO:0030334,GO:0030335,GO:0030424,GO:0030430,GO:0030658,GO:0030659,GO:0030667,GO:0030900,GO:0030950,GO:0030952,GO:0031045,GO:0031090,GO:0031224,GO:0031225,GO:0031226,GO:0031253,GO:0031300,GO:0031301,GO:0031302,GO:0031303,GO:0031323,GO:0031324,GO:0031344,GO:0031346,GO:0031410,GO:0031526,GO:0031625,GO:0031667,GO:0031668,GO:0031960,GO:0031965,GO:0031967,GO:0031975,GO:0031982,GO:0031984,GO:0032127,GO:0032268,GO:0032269,GO:0032496,GO:0032501,GO:0032502,GO:0032526,GO:0032535,GO:0032809,GO:0032835,GO:0032870,GO:0032879,GO:0032940,GO:0032941,GO:0032984,GO:0032991,GO:0033036,GO:0033267,GO:0033326,GO:0033363,GO:0033554,GO:0033643,GO:0033646,GO:0033655,GO:0033762,GO:0033993,GO:0034219,GO:0034220,GO:0034599,GO:0034614,GO:0034641,GO:0034644,GO:0034654,GO:0035295,GO:0035377,GO:0035378,GO:0035379,GO:0035690,GO:0035821,GO:0036293,GO:0036294,GO:0036477,GO:0040007,GO:0040012,GO:0040017,GO:0042044,GO:0042045,GO:0042060,GO:0042127,GO:0042221,GO:0042383,GO:0042476,GO:0042493,GO:0042538,GO:0042542,GO:0042592,GO:0042594,GO:0042631,GO:0042802,GO:0042886,GO:0042891,GO:0042981,GO:0042995,GO:0043005,GO:0043010,GO:0043025,GO:0043066,GO:0043067,GO:0043069,GO:0043086,GO:0043154,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043230,GO:0043231,GO:0043269,GO:0043270,GO:0043281,GO:0043434,GO:0043624,GO:0043627,GO:0043656,GO:0043657,GO:0043679,GO:0043855,GO:0043933,GO:0044057,GO:0044058,GO:0044085,GO:0044087,GO:0044089,GO:0044092,GO:0044215,GO:0044216,GO:0044217,GO:0044237,GO:0044238,GO:0044241,GO:0044249,GO:0044271,GO:0044281,GO:0044297,GO:0044298,GO:0044306,GO:0044389,GO:0044403,GO:0044419,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044431,GO:0044433,GO:0044434,GO:0044435,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044706,GO:0044853,GO:0045121,GO:0045177,GO:0045178,GO:0045202,GO:0045765,GO:0045766,GO:0045785,GO:0045861,GO:0046068,GO:0046390,GO:0046483,GO:0046541,GO:0046658,GO:0046677,GO:0046683,GO:0046688,GO:0046689,GO:0046691,GO:0046717,GO:0046873,GO:0046875,GO:0046877,GO:0046878,GO:0046879,GO:0046903,GO:0046942,GO:0048145,GO:0048146,GO:0048364,GO:0048468,GO:0048469,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0048588,GO:0048589,GO:0048592,GO:0048593,GO:0048731,GO:0048764,GO:0048765,GO:0048767,GO:0048856,GO:0048869,GO:0048871,GO:0048878,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050877,GO:0050878,GO:0050886,GO:0050891,GO:0050896,GO:0050953,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051179,GO:0051181,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051259,GO:0051260,GO:0051261,GO:0051262,GO:0051270,GO:0051272,GO:0051289,GO:0051290,GO:0051291,GO:0051336,GO:0051346,GO:0051384,GO:0051458,GO:0051591,GO:0051592,GO:0051702,GO:0051704,GO:0051707,GO:0051716,GO:0051817,GO:0051851,GO:0051924,GO:0051928,GO:0052547,GO:0052548,GO:0052652,GO:0055037,GO:0055038,GO:0055044,GO:0055085,GO:0055086,GO:0060255,GO:0060322,GO:0060429,GO:0060456,GO:0060491,GO:0060548,GO:0060560,GO:0060986,GO:0061326,GO:0061437,GO:0061440,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0065010,GO:0070062,GO:0070293,GO:0070295,GO:0070301,GO:0070382,GO:0070482,GO:0070633,GO:0070887,GO:0071214,GO:0071229,GO:0071236,GO:0071241,GO:0071248,GO:0071260,GO:0071280,GO:0071288,GO:0071300,GO:0071310,GO:0071320,GO:0071383,GO:0071384,GO:0071385,GO:0071396,GO:0071407,GO:0071417,GO:0071453,GO:0071456,GO:0071462,GO:0071466,GO:0071470,GO:0071472,GO:0071474,GO:0071478,GO:0071482,GO:0071495,GO:0071496,GO:0071548,GO:0071549,GO:0071695,GO:0071702,GO:0071704,GO:0071705,GO:0071731,GO:0071732,GO:0071804,GO:0071805,GO:0071840,GO:0071944,GO:0072001,GO:0072006,GO:0072009,GO:0072012,GO:0072014,GO:0072019,GO:0072020,GO:0072022,GO:0072032,GO:0072044,GO:0072070,GO:0072073,GO:0072080,GO:0072170,GO:0072205,GO:0072207,GO:0072210,GO:0072220,GO:0072224,GO:0072229,GO:0072230,GO:0072232,GO:0072234,GO:0072236,GO:0072237,GO:0072239,GO:0072243,GO:0072358,GO:0072359,GO:0072488,GO:0072521,GO:0072522,GO:0080090,GO:0080147,GO:0080170,GO:0085018,GO:0090066,GO:0090407,GO:0090558,GO:0090596,GO:0090627,GO:0097159,GO:0097205,GO:0097237,GO:0097305,GO:0097327,GO:0097366,GO:0097435,GO:0097458,GO:0097708,GO:0098588,GO:0098589,GO:0098590,GO:0098655,GO:0098656,GO:0098660,GO:0098662,GO:0098791,GO:0098793,GO:0098805,GO:0098857,GO:0098858,GO:0098862,GO:0099094,GO:0099402,GO:0099503,GO:0104004,GO:0120025,GO:0120032,GO:0120034,GO:0120035,GO:0120038,GO:0150034,GO:1901135,GO:1901137,GO:1901293,GO:1901342,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901618,GO:1901652,GO:1901654,GO:1901655,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902170,GO:1902743,GO:1902745,GO:1903561,GO:1904018,GO:1905392,GO:1990349,GO:2000026,GO:2000116,GO:2000117,GO:2000145,GO:2000147
EggNOG free text desc.	water channel activity
EggNOG OGs	COG0580@1,KOG0223@2759
COG Functional cat.	U
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko02000,ko04147
Hectar predicted targeting category	signal peptide
Exons	3
Model size	390
Cds size	390
Stop	1
Start	0

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig10223.161.1	prot_S-dermatodea_contig10223.161.1	Saccorhiza dermatodea SderLu1190fm monoicous	polypeptide	S-dermatodea_contig10223 6524..8070 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622924145.886336-CDS-S-dermatodea_contig10223:6523..6647	1622924145.886336-CDS-S-dermatodea_contig10223:6523..6647	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig10223 6524..6647 -
1694079048.986652-CDS-S-dermatodea_contig10223:6523..6647	1694079048.986652-CDS-S-dermatodea_contig10223:6523..6647	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig10223 6524..6647 -
1622924145.8966866-CDS-S-dermatodea_contig10223:7289..7383	1622924145.8966866-CDS-S-dermatodea_contig10223:7289..7383	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig10223 7290..7383 -
1694079049.0250034-CDS-S-dermatodea_contig10223:7289..7383	1694079049.0250034-CDS-S-dermatodea_contig10223:7289..7383	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig10223 7290..7383 -
1622924145.9050908-CDS-S-dermatodea_contig10223:7898..8070	1622924145.9050908-CDS-S-dermatodea_contig10223:7898..8070	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig10223 7899..8070 -
1694079049.035589-CDS-S-dermatodea_contig10223:7898..8070	1694079049.035589-CDS-S-dermatodea_contig10223:7898..8070	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig10223 7899..8070 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at S-dermatodea_contig10223:6524..8070-
coding sequence from alignment at S-dermatodea_contig10223:6524..8070-

protein sequence of mRNA_S-dermatodea_contig10223.161.1

>prot_S-dermatodea_contig10223.161.1 ID=prot_S-dermatodea_contig10223.161.1|Name=mRNA_S-dermatodea_contig10223.161.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=130bp
HNCRANDLQVADAFGGEVVCTFLLVTTVFAACDGELGRKNAHTGPLLPFV
IGMAVLLDHLILIPVDGCSINPARSFATAFTNNQWDDHWVFWIGPMLGGV
LATLVWETVLRPDQPVEDQEKHIVQAAAV*

mRNA from alignment at S-dermatodea_contig10223:6524..8070-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_S-dermatodea_contig10223.161.1 ID=mRNA_S-dermatodea_contig10223.161.1|Name=mRNA_S-dermatodea_contig10223.161.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1547bp|location=Sequence derived from alignment at S-dermatodea_contig10223:6524..8070- (Saccorhiza dermatodea SderLu1190fm monoicous)
CACAATTGCCGCGCGAACGATTTGCAGGTTGCTGACGCCTTCGGCGGTGA
GGTCGTGTGCACGTTCCTGCTGGTGACGACGGTGTTCGCCGCGTGCGATG
GAGAGCTCGGCCGCAAGAATGCCCACACGGGACCCCTGCTGCCTTTCGTC
ATCGGCATGGCCGTCTTGCTGGGTGAGCGGCAACGAGTTTTACCGTTGCG
GTGGTTGGCTGATTCGGCTGATGGGACGGCTGCGGCAACAGCCGCGCCGG
TTCGAGGGTGGGCTCGATCCCTGGCTAGCGGCTCTGTGAACAGCAGTGAA
GGGTTCTGTCACATGATAGATACTGATCGGCCACTAGCACGTACAGGGGT
GTACTGCGCGATTTTTTGCCCGACTTTCCATTCGTAGGGTCCAGGGTCGG
TCGTCCGCTGCTTGTTCCGCTGGCCGCGCAACGGAACAACTTGCCGGCGA
CGGTCAAGTGATTTTGATGTCGCAAACACCCCAAAGACGTGTGCGTGTGT
CCGCCCCCCACCCACATCCCCCAGCCACACGCGAAAGTACAAATAAATCT
AATCTAGTAGTTGAGAGTGGTTTTGACTCCTTCTTCAGAGGGTTTTAAGC
AGTCGTACCGTCGTATTTTCAAGTGAAGATACTAACCCCTTCTTCACGTC
CCCCCTCCCCCCCCCCCCGCGCTTGTCCTTTTCGCAGACCACCTTATCCT
CATCCCCGTGGACGGGTGCTCCATCAACCCGGCCCGCTCCTTCGCCACCG
CATTCACCAACAACCAGTGGGACGACCACTGGTGAGAGGCGGGGGAGGGT
AATTGTTTTTAGGGAGGGGGGGGGGGGGCACAGCAGGCGTCACTTCAACG
ATCGCGGCTGGTCTGTGGTTGATTATTCTCCTGGGGTTCGTGTTGACCGG
CCCGATCCCCGACTCAATCCTGGGAGCACGGGGAGTTATTTATTGTTATT
TATTTTGCGGCTTGAACGATCGATTGGTTGGCTGTGTTCCATCTCCGTCG
TCTAGGCCCGGTTCTTCAGCAGGAGTTTTCGTTTCGTCCTTCGATACGAC
GACCTGATTCTTTAATTCTTGAACAGGTTGACCATATTCCGACTTTGAAC
GATGGGTTGGTTTGATTGGCTTGAGTTGGCACCCACGGGCTCGAACCAAA
TTCTTGAGCAGGTGGTGGATCATGTAAAAGTATCACACTTGCACAGCGAT
CTGTATATGCGCGTATCGCATGCATTTCGCCGGCTGTAGAGTTACCAGTG
ACTACCATGACTTTTGCGTATGTCCTCGTACCACATCGTGAGGTCTGATC
ACGCGCAAATGGAGGAAGCTCTGCGCATCCCGGATCTCCACCCGACCCGT
ATTGCGGAGGCATGCCAGCAGCAACCCAAAGCTTACCCCCCCCCTCTTCC
TGTTCCTTCTCGCTGTGCCGCAGGGTGTTCTGGATCGGCCCCATGCTTGG
CGGCGTCCTTGCCACTTTGGTCTGGGAGACTGTGCTTCGCCCTGACCAGC
CTGTCGAAGACCAGGAAAAGCACATCGTCCAAGCGGCCGCCGTCTGA

Coding sequence (CDS) from alignment at S-dermatodea_contig10223:6524..8070-

>mRNA_S-dermatodea_contig10223.161.1 ID=mRNA_S-dermatodea_contig10223.161.1|Name=mRNA_S-dermatodea_contig10223.161.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=780bp|location=Sequence derived from alignment at S-dermatodea_contig10223:6524..8070- (Saccorhiza dermatodea SderLu1190fm monoicous)
CACAATTGCCGCGCGAACGATTTGCAGGTTGCTGACGCCTTCGGCGGTGA
GGTCGTGTGCACGTTCCTGCTGGTGACGACGGTGTTCGCCGCGTGCGATG
GAGAGCTCGGCCGCAAGAATGCCCACACGGGACCCCTGCTGCCTTTCGTC
ATCGGCATGGCCGTCTTGCTGGCACAATTGCCGCGCGAACGATTTGCAGG
TTGCTGACGCCTTCGGCGGTGAGGTCGTGTGCACGTTCCTGCTGGTGACG
ACGGTGTTCGCCGCGTGCGATGGAGAGCTCGGCCGCAAGAATGCCCACAC
GGGACCCCTGCTGCCTTTCGTCATCGGCATGGCCGTCTTGCTGGACCACC
TTATCCTCATCCCCGTGGACGGGTGCTCCATCAACCCGGCCCGCTCCTTC
GCCACCGCATTCACCAACAACCAGTGGGACGACCACTGACCACCTTATCC
TCATCCCCGTGGACGGGTGCTCCATCAACCCGGCCCGCTCCTTCGCCACC
GCATTCACCAACAACCAGTGGGACGACCACTGGGTGTTCTGGATCGGCCC
CATGCTTGGCGGCGTCCTTGCCACTTTGGTCTGGGAGACTGTGCTTCGCC
CTGACCAGCCTGTCGAAGACCAGGAAAAGCACATCGTCCAAGCGGCCGCC
GTCTGAGGTGTTCTGGATCGGCCCCATGCTTGGCGGCGTCCTTGCCACTT
TGGTCTGGGAGACTGTGCTTCGCCCTGACCAGCCTGTCGAAGACCAGGAA
AAGCACATCGTCCAAGCGGCCGCCGTCTGA