mRNA_S-dermatodea_contig1021.153.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig1021.153.1 vs. uniprot
Match: D8LHY8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHY8_ECTSI) HSP 1 Score: 152 bits (385), Expect = 3.190e-39 Identity = 90/191 (47.12%), Postives = 107/191 (56.02%), Query Frame = 3
Query: 18 QVRSAEKRGHAVYRSLSDIHNFLYEAVCPPPRTPLEARQSPDPRQVPPAATRDAGELGNIR------GCDNGQRRCLALQDYYPFWRSRLEEAEAGKILPVDLSDDSKVRLVMFDDNIGRL---GCAAGAHIVDVRDTATGGPVEFDVASKRFIVRAEPYLAIK-----------DPGESNYFLVEVLRLL 530
Q+RS E +GH VYRS++D H+ + E V P P + +P P G G N RCLAL+D+YPFWR LE AEAGK+LPVDLSD KV VMFDDNIG G +GAHIVDVRD TG PV FD A +R IVRAEP+LAI D N FLV++L+ L
Sbjct: 390 QLRSIESKGHPVYRSVADAHDAICERVVSAPLPPAGS-VAPKPAAXXXXXXXXXXSCGESTNGIAGSGERNNHGRCLALRDFYPFWRKNLESAEAGKVLPVDLSDSPKVWPVMFDDNIGHWRPDGSGSGAHIVDVRDMVTGRPVPFDTALERHIVRAEPFLAIDQDDVAVRAAAADASNHNVFLVQILKRL 579
BLAST of mRNA_S-dermatodea_contig1021.153.1 vs. uniprot
Match: A0A6H5L7S9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7S9_9PHAE) HSP 1 Score: 147 bits (372), Expect = 1.560e-37 Identity = 92/193 (47.67%), Postives = 110/193 (56.99%), Query Frame = 3
Query: 18 QVRSAEKRGHAVYRSLSDIHNFLYEAVCPPPRTPLEARQSPDPRQVPPAATRDAGELGNIRGCDNG---------QRRCLALQDYYPFWRSRLEEAEAGKILPVDLSDDSKVRLVMFDDNIGRL---GCAAGAHIVDVRDTATGGPVEFDVASKRFIVRAEPYLAIK----------DPGESNYFLVEVLRLL 530
Q+RS E +GH VYRS+ D H+ + E V + L S P+ P A T AG + NG RCLAL+D+YPFWR LE AEAGK+LPVDLSD KV VMFDDNIG G + AHIVDVRD TG PV FD+A +R IVRAEP+LAI D N+FLV +L+ L
Sbjct: 360 QLRSIESKGHPVYRSVVDTHDAICERVL----SALPPAGSVAPK--PAATTTTAGPPPSCGESTNGIAGSGETTNHGRCLALRDFYPFWRKNLESAEAGKVLPVDLSDTPKVWPVMFDDNIGHWRPDGSGSDAHIVDVRDMVTGRPVPFDMALERHIVRAEPFLAIDREDVAVGAADDAFGHNFFLVHILKRL 546
BLAST of mRNA_S-dermatodea_contig1021.153.1 vs. uniprot
Match: A0A067CH86_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CH86_SAPPC) HSP 1 Score: 84.0 bits (206), Expect = 4.050e-15 Identity = 48/104 (46.15%), Postives = 62/104 (59.62%), Query Frame = 3
Query: 219 RRCLALQDYYPFWRSRLEEAEAGKILPVDLSDDSKVRLVMFDDNIGRLGCAAGAHIVDVRDTATGGPVEFDVASKRFIVRAEPYLAIKDPGESNYFLVEVLRLL 530
RR A++DY+ +W + E AE GK+L V D V FDD+I A AHIVDVRD ATG V+FDVA ++ R EPY AI DP Y++ V++LL
Sbjct: 280 RRVTAMRDYWEWWSAHAEHAEYGKLLLVTPGDGPAT--VFFDDHIE----ATEAHIVDVRDAATGQVVDFDVAKDTYLKRVEPYYAITDP---QYYIRHVVQLL 374
BLAST of mRNA_S-dermatodea_contig1021.153.1 vs. uniprot
Match: A0A2D4BQN6_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BQN6_PYTIN) HSP 1 Score: 82.0 bits (201), Expect = 3.040e-14 Identity = 45/101 (44.55%), Postives = 60/101 (59.41%), Query Frame = 3
Query: 228 LALQDYYPFWRSRLEEAEAGKILPVDLSDDSKVRLVMFDDNIGRLGCAAGAHIVDVRDTATGGPVEFDVASKRFIVRAEPYLAIKDPGESNYFLVEVLRLL 530
+AL+DY+ +W + E + GK+L VD D+ + FDD+I A AHIVDVRD ATG PV FD + R++ R EP+ AI D S YF+ V LL
Sbjct: 416 IALRDYWEWWSAHAENGDYGKLLLVDTRGDNDEISIFFDDHIE----AHHAHIVDVRDVATGAPVPFDESKGRYLQRVEPFAAITD---SQYFINFVSHLL 509
BLAST of mRNA_S-dermatodea_contig1021.153.1 vs. uniprot
Match: A0A1V9YGT7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGT7_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 6.030e-13 Identity = 45/100 (45.00%), Postives = 58/100 (58.00%), Query Frame = 3
Query: 219 RRCLALQDYYPFWRSRLEEAEAGKILPVDLSDDSKVRLVMFDDNIGRLGCAAGAHIVDVRDTATGGPVEFDVASKRFIVRAEPYLAIKDPGESNYFLVEV 518
RR A++DY+ +W + E AE GK+L V + V FDD+I AA AHIVDVRD ATG V F VA ++ R EPY AI DP Y++ +V
Sbjct: 283 RRVTAIRDYWEWWSAHAEHAEYGKLLLVTPGEGPAT--VFFDDHIE----AAEAHIVDVRDAATGDVVPFAVAKDTYLKRVEPYYAITDP---QYYIAQV 373
BLAST of mRNA_S-dermatodea_contig1021.153.1 vs. uniprot
Match: A0A485KCA4_9STRA (Aste57867_2227 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KCA4_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 3.050e-12 Identity = 53/149 (35.57%), Postives = 78/149 (52.35%), Query Frame = 3
Query: 111 RTPLEARQSPDPRQVPPAATRDAGELGNIRGCDNGQ---------RRCLALQDYYPFWRSRLEEAEAGKILPVDLSDDSKVRLVMFDDNIGRLGCAAGAHIVDVRDTATGGPVEFDVASKRFIVRAEPYLAIKDPGESNYFLVEVLRLL 530
+ P A + D + AAT A ++ +RG + Q R +AL+DY+ +W + E AE GK+L +D S S V FDD++ AHIVDVRD ATG V FD A +++ R EPY AI D ++Y++ + +L
Sbjct: 260 KVPFHASNTTDTPREFYAAT--APDVTVVRGFSSVQETIHSMLATRSVIALRDYWEWWSTHAEHAEYGKLLLIDPSLPS----VFFDDHVEE----HEAHIVDVRDAATGAVVPFDEAKAKYLRRVEPYYAITD---ADYYIHHIQSIL 395
BLAST of mRNA_S-dermatodea_contig1021.153.1 vs. uniprot
Match: A0A6G0WYV9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WYV9_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 1.750e-9 Identity = 40/104 (38.46%), Postives = 61/104 (58.65%), Query Frame = 3
Query: 219 RRCLALQDYYPFWRSRLEEAEAGKILPVDLSDDSKVRLVMFDDNIGRLGCAAGAHIVDVRDTATGGPVEFDVASKRFIVRAEPYLAIKDPGESNYFLVEVLRLL 530
R +AL+DY+ +W + E AE GK+L VD + + V FDD+I AHIVDVR+ ATG V F+ A +++ R EP+ AI D ++Y++ V ++
Sbjct: 289 RPVIALRDYWEWWSTHAEHAEYGKLLLVDPA----LPAVFFDDHIEE----HEAHIVDVRNAATGTVVPFEEAKAKYLRRVEPFYAITD---ASYYIRHVQAIV 381 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1021.153.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1021.153.1 >prot_S-dermatodea_contig1021.153.1 ID=prot_S-dermatodea_contig1021.153.1|Name=mRNA_S-dermatodea_contig1021.153.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=82bp MFDDNIGRLGCAAGAHIVDVRDTATGGPVEFDVASKRFIVRAEPYLAIKDback to top mRNA from alignment at S-dermatodea_contig1021:19512..20911+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig1021.153.1 ID=mRNA_S-dermatodea_contig1021.153.1|Name=mRNA_S-dermatodea_contig1021.153.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1400bp|location=Sequence derived from alignment at S-dermatodea_contig1021:19512..20911+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig1021:19512..20911+ >mRNA_S-dermatodea_contig1021.153.1 ID=mRNA_S-dermatodea_contig1021.153.1|Name=mRNA_S-dermatodea_contig1021.153.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=492bp|location=Sequence derived from alignment at S-dermatodea_contig1021:19512..20911+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |