mRNA_S-dermatodea_contig1018.133.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
|
Overview
Homology
BLAST of mRNA_S-dermatodea_contig1018.133.1 vs. uniprot
Match: D7FVN7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVN7_ECTSI) HSP 1 Score: 298 bits (762), Expect = 1.630e-95 Identity = 171/240 (71.25%), Postives = 197/240 (82.08%), Query Frame = 1
Query: 1 KALRYFRMCDSDGSGEVDLEEFRVALFAVDPDSGNPVGFTPNSLLSPLDAFEXXXXXXXXXXXXXXXFFLLQYLDLEVSEVQQDKMFAKYDSDKSGYIEYAEFKKIWVRLANVKKELSDRGVKIPKVATNNMLSNMLEQIIDAEEDRERRAIAEAERWAKWQLLLKDKRRAYEKARRRTTTELKSALDAGGSVWVFGTGPFGEFTEPAPKVFLS-VHSSTH---LQNMWTTRVKPPATAP 708
KALR+FR VALFAVDPDSGNPVGFTP++LL+PLDAF XXXXXXXXXXXXXXXFFLLQ+L +E +E++ ++MF KYD+D+SGYIEYAEFKKIWVR+ NVKKEL +RGVKIPK+ATN L NMLEQI+DAEEDRERRA+AEAERWAKWQLLLKDKRRAYEKA+RRT +ELK+ALDAGGSVW+FGTGPFGEFT P P+ H H +++MW TRV PPATAP
Sbjct: 114 KALRFFRXXXXXXXXXXXXXXXXVALFAVDPDSGNPVGFTPSALLTPLDAFXXXXXXXXXXXXXXXXFFLLQFLGIETTEMKLEEMFKKYDTDQSGYIEYAEFKKIWVRMTNVKKELLERGVKIPKIATNRTLYNMLEQILDAEEDRERRAMAEAERWAKWQLLLKDKRRAYEKAQRRTKSELKAALDAGGSVWMFGTGPFGEFTAPPPRTLKQGEHEFAHYDDVKSMWNTRVNPPATAP 353
BLAST of mRNA_S-dermatodea_contig1018.133.1 vs. uniprot
Match: A0A836CDL9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDL9_9STRA) HSP 1 Score: 231 bits (589), Expect = 1.010e-69 Identity = 125/235 (53.19%), Postives = 159/235 (67.66%), Query Frame = 1
Query: 1 KALRYFRMCDSDGSGEVDLEEFRVALFAVDPDSGNPVGFTPNSLLSPLDAFEXXXXXXXXXXXXXXXFFLLQYLDLEVSEVQQDKMFAKYDSDKSGYIEYAEFKKIWVRLANVKKELSDRGVKIPKVATNNMLSNMLEQIIDAEEDRERRAIAEAERWAKWQLLLKDKRRAYEKARRRTTTELKSALDAGGSVWVFGTGPFGEFT-EPAPKVFLSVHSSTH---LQNMWTTRVKP 693
KALRYFR C +ALFAVDPD+GNPVGF PNSLLSP+DAF+ FFLLQ+L +EVSE + + +F +YD++ +G IEY EFKKIWVRLANVKKEL+DRG+KIPK+AT+ L LE+I+D EE+RE RA+AEAERW +WQ LL+ KR A+ +A+ R ELK+ALDA GSV+VFGTG + EF +P + F + H L+ +W RV P
Sbjct: 75 KALRYFRTCXXXXXXXXXXXXXXMALFAVDPDNGNPVGFAPNSLLSPMDAFDMFDTDKSGNIDEDEFFFLLQFLGVEVSEERLESLFKQYDTNGNGTIEYDEFKKIWVRLANVKKELADRGIKIPKLATHGQLVRKLERILDEEEEREARALAEAERWGRWQALLRGKRAAHRRAKLRAEAELKTALDAAGSVYVFGTGAYREFAADPPREAFQGRYRYQHWDLLKELWGRRVAP 309
BLAST of mRNA_S-dermatodea_contig1018.133.1 vs. uniprot
Match: A0A6G0XXD3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXD3_9STRA) HSP 1 Score: 192 bits (489), Expect = 1.180e-52 Identity = 104/237 (43.88%), Postives = 147/237 (62.03%), Query Frame = 1
Query: 1 KALRYFRMCDSDGSGEVDLEEFRVALFAVDPDSGNPVGFTPNSLLSPLDAFEXXXXXXXXXXXXXXXFFLLQYLDLEVSEVQQDKMFAKYDSDKSGYIEYAEFKKIWVRLANVKKELSDRGVKIPKVATNNMLSNMLEQIIDAEEDRERRAIAEAERWAKWQLLLKDKRRAYEKARRRTTTELKSALDAGGSVWVFGTGPFGEFT-EPAPKVFLSVHSSTHLQNMWTTRVKPPATAP 708
KA+R F CD DGSGE+DLEEF++A+FAVDP++GN +GF P+SLL+P DAF L+Y ++VS+ +Q+K+F KYD+DKSG+IEY+EF+ +W++ A++K EL RG+++PK T L L I+D EE RE A+ EA+ + WQL + KA R EL +ALDA G V++ G G +GEF +PA + L TH+ +W +RV P T P
Sbjct: 133 KAIRIFDSCDKDGSGEIDLEEFKMAMFAVDPNTGNTLGFAPSSLLTPKDAFHLFDSNGSGKLDELEFADALEYFGMDVSDAKQEKLFHKYDTDKSGFIEYSEFRAMWLQCADLKHELMSRGIEVPKFTTRTALMQNLANILDEEERREEEAMEEAKWFHHWQLERLRRVELARKAALRAQDELAAALDAAGQVYMLGPGQYGEFKGDPASRDELLFDRYTHVSEIWQSRVFPTYTPP 369
BLAST of mRNA_S-dermatodea_contig1018.133.1 vs. uniprot
Match: A0A485KYY0_9STRA (Aste57867_12943 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KYY0_9STRA) HSP 1 Score: 188 bits (478), Expect = 1.980e-52 Identity = 101/232 (43.53%), Postives = 148/232 (63.79%), Query Frame = 1
Query: 1 KALRYFRMCDSDGSGEVDLEEFRVALFAVDPDSGNPVGFTPNSLLSPLDAFEXXXXXXXXXXXXXXXFFLLQYLDLEVSEVQQDKMFAKYDSDKSGYIEYAEFKKIWVRLANVKKELSDRGVKIPKVATNNMLSNMLEQIIDAEEDRERRAIAEAERWAKWQLLLKDKRRAYEKARRRTTTELKSALDAGGSVWVFGTGPFGEFT-EPAPKVFLSVHSSTHLQNMWTTRVKP 693
KA+R F MCD D SGE+DLEEF++A+F VDP++GN +GF P+SLLSP DAF L+Y + VS+ +Q+K+F KYDSDKSGYI+Y+EF+ +W++ A+++ EL RG++IPK AT L +L +++D EE E +A+AEA+ + +WQ+ ++ KA R EL +ALDA G V+V G+G G+F PA + + TH+ ++W RV P
Sbjct: 132 KAIRIFDMCDKDRSGEIDLEEFKMAMFTVDPNTGNSLGFAPSSLLSPKDAFHLFDSNGSGRLDELEFADALEYFGMTVSDAKQEKLFQKYDSDKSGYIDYSEFRVMWLQCADLRHELGARGIEIPKYATRKTLMQILTKVLDEEERIEDQALAEAKWYHEWQMEKIRRQELARKAGLRAQDELAAALDAAGQVYVLGSGHRGQFGGNPASRDTMLYDGYTHVSDIWQARVFP 363
BLAST of mRNA_S-dermatodea_contig1018.133.1 vs. uniprot
Match: A0A024UUX4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UUX4_9STRA) HSP 1 Score: 191 bits (484), Expect = 5.610e-52 Identity = 102/232 (43.97%), Postives = 145/232 (62.50%), Query Frame = 1
Query: 1 KALRYFRMCDSDGSGEVDLEEFRVALFAVDPDSGNPVGFTPNSLLSPLDAFEXXXXXXXXXXXXXXXFFLLQYLDLEVSEVQQDKMFAKYDSDKSGYIEYAEFKKIWVRLANVKKELSDRGVKIPKVATNNMLSNMLEQIIDAEEDRERRAIAEAERWAKWQLLLKDKRRAYEKARRRTTTELKSALDAGGSVWVFGTGPFGEF-TEPAPKVFLSVHSSTHLQNMWTTRVKP 693
KA+R F CD DGSGE+DLEEF++A+F VDP +GN +GF+P+SLL+P D F L+Y V++ +Q+++F KYD+DKSG+IEY+EF+ +W+ A+VK EL+ RGV +PK AT L +L + +D EE RE A+AEA+ + +WQL ++ +KA R EL +ALDA G V+V G G G+F +EPA + L TH+ +W RV P
Sbjct: 136 KAIRIFDTCDKDGSGEIDLEEFKMAMFTVDPTTGNSLGFSPSSLLTPKDTFHLFDSNGSGQLDELEFADALEYFGFRVTDAKQERLFQKYDTDKSGFIEYSEFRAMWLECADVKHELASRGVDVPKYATRKTLMQILAKHLDDEERREEEAMAEAKWFHEWQLEKIRRKSLADKATLRAQDELAAALDAAGQVYVLGPGQHGQFNSEPAARDALLYDGYTHVSEIWQARVVP 367
BLAST of mRNA_S-dermatodea_contig1018.133.1 vs. uniprot
Match: A0A662WT10_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WT10_9STRA) HSP 1 Score: 187 bits (475), Expect = 8.570e-52 Identity = 104/234 (44.44%), Postives = 149/234 (63.68%), Query Frame = 1
Query: 1 KALRYFRMCDSDGSGEVDLEEFRVALFAVDPDSGNPVGFTPNSLLSPLDAFEXXXXXXXXXXXXXXXFFLLQYLDLEVSEVQQDKMFAKYDSDKSGYIEYAEFKKIWVRLANVKKELSDRGVKIPKVATNNMLSNMLEQIIDAEEDRERRAIAEAERWAKWQLLLKDKRRAYEKARRRTTTELKSALDAGGSVWVFGTGPFGEFT-EPAPKVFLSVHSSTHLQNMWTTRVKPPA 699
KA+R FR CD+DG GE+D EF++ALFAVDP SGN +GF+P++LL P DAFE +L+Y D++VS+ +Q+ +F KYD DKSGYI+Y EF+ +WVRL +V++EL+ RGVKIPK A ++ L MLEQ +D EE RE A AEA+++ + Q + + + KA R EL +ALDA G V++ G+G + +F EP + + +W++RV P A
Sbjct: 74 KAMRIFRNCDTDGGGEIDRTEFKMALFAVDPVSGNTLGFSPSTLLGPRDAFELFDEDGTGQIDELEFADVLEYFDMDVSDAKQETIFKKYDKDKSGYIDYKEFRAMWVRLVDVREELTKRGVKIPKHAASSKLYQMLEQFLDEEEAREALAFAEAQKFLQKQRNKELREQLARKAIVRAEDELAAALDAAGQVYIIGSGRYDQFVGEPITQDEELFPGFKAVSEIWSSRVNPTA 307
BLAST of mRNA_S-dermatodea_contig1018.133.1 vs. uniprot
Match: W4H9F4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H9F4_9STRA) HSP 1 Score: 189 bits (480), Expect = 1.930e-51 Identity = 101/232 (43.53%), Postives = 145/232 (62.50%), Query Frame = 1
Query: 1 KALRYFRMCDSDGSGEVDLEEFRVALFAVDPDSGNPVGFTPNSLLSPLDAFEXXXXXXXXXXXXXXXFFLLQYLDLEVSEVQQDKMFAKYDSDKSGYIEYAEFKKIWVRLANVKKELSDRGVKIPKVATNNMLSNMLEQIIDAEEDRERRAIAEAERWAKWQLLLKDKRRAYEKARRRTTTELKSALDAGGSVWVFGTGPFGEFT-EPAPKVFLSVHSSTHLQNMWTTRVKP 693
KA+R F CD DGSGE+D+EEF++A+F VDP +GN +GF+P+SLL+P DAF L+Y V++ +Q+++F KYD+DKSG+IEY+EF+ +W++ AN+K EL RGV +PK AT +LE+ +D EE RE A+ EA+ + +WQL +R KA R EL +ALDA G V+V G+G G+F +PA + L TH+ +W +RV P
Sbjct: 130 KAIRIFDTCDKDGSGEIDMEEFKMAMFMVDPTTGNSLGFSPSSLLTPKDAFHLFDSNGSGQLDELEFADALEYFGFSVTDAKQERLFLKYDTDKSGFIEYSEFRAMWLQCANIKHELVSRGVDVPKYATRKTHMQILEKALDEEERREDEAMDEAKWFHEWQLEKIRRRTLAAKAALRAQDELAAALDAAGQVYVLGSGQHGQFNGDPAARDALVYDGYTHVSEIWQSRVLP 361
BLAST of mRNA_S-dermatodea_contig1018.133.1 vs. uniprot
Match: A0A8J2SRF7_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SRF7_9STRA) HSP 1 Score: 189 bits (479), Expect = 2.600e-51 Identity = 108/262 (41.22%), Postives = 147/262 (56.11%), Query Frame = 1
Query: 16 FRMCDSDGSGEVDLEEFRV------------------------------------ALFAVDPDSGNPVGFTPNSLLSPLDAFEXXXXXXXXXXXXXXXFFLLQYLDLEVSEVQQDKMFAKYDSDKSGYIEYAEFKKIWVRLANVKKELSDRGVKIPKVATNNMLSNMLEQIIDAEEDRERRAIAEAERWAKWQLLLKDKRRAYEKARRRTTTELKSALDAGGSVWVFGTGPFGEFTEPAPKVFLSVHSSTH--LQNMWTTRV 687
F+ D+DGSGE+DLEEF+V ALFA DP++GNP+GF PN+LL+P+DAFE +F+L+YL LEVS+ Q+++F KYD Y EF++IW+ +A+VKKEL+DRGV +PK A+ L +LE+ +D EE++ERRA+AEAERW W+ +L K + ARRR EL ALDA G ++VFG G G+F K TH +Q +WT RV
Sbjct: 86 FKRFDTDGSGEIDLEEFKVMLKKLKIHMSSAKAVKYXXXXXXXXXXXXXXXXXXXALFACDPNNGNPIGFAPNALLTPIDAFEMFDEDGSGNINEDEFYFVLEYLKLEVSDANQERLFLKYDKXXXXXXXYDEFRQIWLAVADVKKELTDRGVDVPKFASRKKLERILEKCLDEEEEQERRAMAEAERWRTWRAILDQKNEYIKHARRRAQIELCKALDAAGQIYVFGRGARGQFGAQGEK------DGTHEIVQKLWTRRV 341
BLAST of mRNA_S-dermatodea_contig1018.133.1 vs. uniprot
Match: A0A6A5AEZ5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AEZ5_9STRA) HSP 1 Score: 179 bits (455), Expect = 1.360e-50 Identity = 99/235 (42.13%), Postives = 142/235 (60.43%), Query Frame = 1
Query: 1 KALRYFRMCDSDGSGEVDLEEFRVALFAVDPDSGNPVGFTPNSLLSPLDAFEXXXXXXXXXXXXXXXFFLLQYLDLEVSEVQQDKMFAKYDSDKSGYIEYAEFKKIWVRLANVKKELSDRGVKIPKVATNNMLSNMLEQIIDAEEDRERRAIAEAERWAKWQLLLKDKRRAYEKARRRTTTELKSALDAGGSVWVFGTGPF---------GEFT-EPAPKVFLSVHSSTHLQNMW 675
KA+R F CD DGSGE+D+EEF++A+F VDP +GN +GF+P+SLL+P DAF L+Y V++ +Q+++F KYD+DKSG+IEY+EF+ +W++ AN+K EL RGV +PK AT L +LE+ +D EE RE A+ EA+ + +WQL +R KA R EL +ALDA G V+V G+G G+F +PA + L TH+ +W
Sbjct: 92 KAIRIFDTCDKDGSGEIDMEEFKMAMFMVDPTTGNSLGFSPSSLLTPKDAFHLFDSNGSGQLDELEFADALEYFGFSVTDAKQERLFLKYDTDKSGFIEYSEFRAMWLQCANIKHELVSRGVDVPKYATRKTLMQILEKALDEEERREDEAMDEAKWFHEWQLEKIRRRTLAAKAALRAQDELAAALDAAGQVYVLGSGQHVPANESHFTGQFNGDPAARDALVYDGYTHVSEIW 326
BLAST of mRNA_S-dermatodea_contig1018.133.1 vs. uniprot
Match: A0A662WMU7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WMU7_9STRA) HSP 1 Score: 177 bits (448), Expect = 1.480e-50 Identity = 96/205 (46.83%), Postives = 136/205 (66.34%), Query Frame = 1
Query: 1 KALRYFRMCDSDGSGEVDLEEFRVALFAVDPDSGNPVGFTPNSLLSPLDAFEXXXXXXXXXXXXXXXFF-LLQYLDLEVSEVQQDKMFAKYDSDKSGYIEYAEFKKIWVRLANVKKELSDRGVKIPKVATNNMLSNMLEQIIDAEEDRERRAIAEAERWAKWQLLLKDKRRAYEKARRRTTTELKSALDAGGSVWVFGTGPFGEF 612
KA+R FR CD+DG GE+D EF++ALFAVDP SGN +GF+P++LL P DAFE +L+Y D++VS+ +Q+ +F KYD DKSGYI+Y EF+ +WVRL +V++EL+ RGVKIPK A ++ L MLE+ +D EE RE A AEA+ + + Q + + + KA R EL +ALDA G V++ G+G + +F
Sbjct: 116 KAMRIFRKCDTDGGGEIDRTEFKMALFAVDPVSGNTLGFSPSTLLGPRDAFELFDEDGTGQIDELEFAQDVLEYFDMDVSDAKQETIFKKYDKDKSGYIDYKEFRAMWVRLVDVREELAKRGVKIPKHAASSKLHQMLEEFLDDEEAREALAFAEAQEFLQKQRNKELREQLARKAIVRAEDELAAALDAAGQVYIIGSGRYDQF 320 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1018.133.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1018.133.1 >prot_S-dermatodea_contig1018.133.1 ID=prot_S-dermatodea_contig1018.133.1|Name=mRNA_S-dermatodea_contig1018.133.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=229bp MCDSDGSGEVDLEEFRVALFAVDPDSGNPVGFTPNSLLSPLDAFEMFDEDback to top mRNA from alignment at S-dermatodea_contig1018:20995..23172- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig1018.133.1 ID=mRNA_S-dermatodea_contig1018.133.1|Name=mRNA_S-dermatodea_contig1018.133.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2178bp|location=Sequence derived from alignment at S-dermatodea_contig1018:20995..23172- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig1018:20995..23172- >mRNA_S-dermatodea_contig1018.133.1 ID=mRNA_S-dermatodea_contig1018.133.1|Name=mRNA_S-dermatodea_contig1018.133.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1374bp|location=Sequence derived from alignment at S-dermatodea_contig1018:20995..23172- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |